AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0939750

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0939750 MtrunA17_Chr6g0455361 75.278 449 41 4 1 379 5 453 0.0 647
Msa0939750 MtrunA17_Chr6g0455361 92.157 153 12 0 392 544 308 460 7.33e-93 291
Msa0939750 MtrunA17_Chr6g0455351 72.991 448 21 5 1 379 5 421 0.0 616
Msa0939750 MtrunA17_Chr6g0455351 71.895 153 8 1 392 544 311 428 7.98e-62 209
Msa0939750 MtrunA17_Chr6g0455341 62.832 452 95 4 1 379 5 456 0.0 544
Msa0939750 MtrunA17_Chr6g0455341 75.325 154 37 1 392 544 310 463 1.51e-73 241
Msa0939750 MtrunA17_Chr6g0454761 44.606 482 176 12 5 403 9 482 1.07e-109 348
Msa0939750 MtrunA17_Chr6g0454761 47.857 420 144 9 34 379 520 938 2.86e-109 347
Msa0939750 MtrunA17_Chr6g0454761 57.792 154 62 2 393 544 793 945 2.06e-49 183
Msa0939750 MtrunA17_Chr6g0454761 56.051 157 63 2 393 544 302 457 1.62e-46 174
Msa0939750 MtrunA17_Chr7g0219331 39.869 459 187 13 5 381 98 549 8.74e-95 299
Msa0939750 MtrunA17_Chr7g0219331 47.742 155 76 3 392 543 401 553 6.12e-41 155
Msa0939750 MtrunA17_Chr7g0219331 55.000 60 25 1 5 64 3 60 8.42e-14 73.9
Msa0939750 MtrunA17_Chr7g0219301 39.956 458 188 12 5 381 5 456 3.96e-92 301
Msa0939750 MtrunA17_Chr7g0219301 37.731 379 181 9 26 381 533 879 2.60e-65 228
Msa0939750 MtrunA17_Chr7g0219301 48.387 155 75 3 392 543 731 883 1.06e-39 154
Msa0939750 MtrunA17_Chr7g0219301 49.032 155 74 3 392 543 308 460 3.20e-39 153
Msa0939750 MtrunA17_Chr7g0219291 34.685 444 195 12 26 379 373 811 6.45e-67 231
Msa0939750 MtrunA17_Chr7g0219291 36.774 155 89 3 393 541 664 815 7.32e-25 109
Msa0939750 MtrunA17_Chr7g0219291 31.222 221 124 4 176 369 95 314 1.11e-23 105
Msa0939750 MtrunA17_Chr7g0219291 37.681 138 83 2 393 527 177 314 4.30e-21 97.4
Msa0939750 MtrunA17_Chr2g0323511 32.272 471 224 12 3 382 15 481 1.02e-62 213
Msa0939750 MtrunA17_Chr2g0323511 38.312 154 92 2 393 544 333 485 1.64e-26 112
Msa0939750 MtrunA17_Chr7g0219241 32.816 451 199 12 26 379 26 469 4.62e-62 211
Msa0939750 MtrunA17_Chr7g0219241 34.437 151 97 1 393 541 323 473 5.83e-24 105
Msa0939750 MtrunA17_Chr7g0219121 34.792 480 197 18 5 381 9 475 4.29e-61 209
Msa0939750 MtrunA17_Chr7g0219121 40.260 154 83 4 393 541 328 477 1.82e-22 100
Msa0939750 MtrunA17_Chr7g0219181 32.522 452 202 12 26 379 25 471 2.96e-59 204
Msa0939750 MtrunA17_Chr7g0219181 33.778 225 121 5 322 543 278 477 8.81e-29 119
Msa0939750 MtrunA17_Chr2g0323471 32.192 438 214 11 26 382 41 476 8.53e-54 189
Msa0939750 MtrunA17_Chr2g0323471 35.714 154 96 2 393 544 328 480 1.14e-21 98.2
Msa0939750 MtrunA17_Chr8g0339641 32.230 453 212 12 24 382 20 471 8.79e-52 184
Msa0939750 MtrunA17_Chr8g0339641 37.179 156 94 2 393 544 320 475 4.93e-23 102
Msa0939750 MtrunA17_Chr3g0087901 28.942 463 232 15 5 380 9 461 3.10e-49 176
Msa0939750 MtrunA17_Chr3g0087901 34.247 146 92 3 401 544 324 467 2.38e-21 97.1
Msa0939750 MtrunA17_Chr2g0323501 29.186 442 218 13 30 381 37 473 7.81e-43 159
Msa0939750 MtrunA17_Chr2g0323501 36.486 148 90 3 398 544 334 478 3.31e-24 105
Msa0939750 MtrunA17_Chr7g0219341 48.684 152 73 3 395 543 3 152 8.27e-43 150
Msa0939750 MtrunA17_Chr7g0219341 47.297 148 69 3 241 381 3 148 6.95e-38 136
Msa0939750 MtrunA17_Chr7g0219881 28.112 466 243 12 1 382 2 459 1.41e-42 158
Msa0939750 MtrunA17_Chr7g0219881 33.333 141 85 2 397 537 325 456 1.21e-17 85.9
Msa0939750 MtrunA17_Chr2g0323421 30.201 447 220 15 21 380 65 506 2.51e-42 158
Msa0939750 MtrunA17_Chr2g0323421 34.641 153 96 3 393 544 363 512 1.14e-21 98.6
Msa0939750 MtrunA17_Chr3g0083761 27.957 465 246 13 1 382 2 460 7.97e-42 156
Msa0939750 MtrunA17_Chr3g0083761 29.032 155 96 3 397 544 317 464 5.01e-14 74.3
Msa0939750 MtrunA17_Chr2g0323481 30.303 429 201 15 43 381 39 459 1.69e-36 141
Msa0939750 MtrunA17_Chr2g0323481 39.869 153 88 3 393 544 315 464 2.39e-27 115
Msa0939750 MtrunA17_Chr7g0219311 49.242 132 62 3 395 523 15 144 2.12e-34 127
Msa0939750 MtrunA17_Chr7g0219311 45.455 143 69 3 230 365 4 144 1.73e-33 124
Msa0939750 MtrunA17_Chr7g0219251 46.753 154 59 3 26 156 24 177 7.59e-34 126
Msa0939750 MtrunA17_Chr7g0219211 45.238 168 63 5 12 152 11 176 1.02e-30 122
Msa0939750 MtrunA17_Chr7g0219101 27.603 413 223 13 31 381 30 428 2.89e-30 123
Msa0939750 MtrunA17_Chr7g0219101 36.913 149 87 3 397 541 285 430 1.71e-21 97.1
Msa0939750 MtrunA17_Chr7g0219221 37.086 151 93 2 393 541 8 158 2.60e-26 105
Msa0939750 MtrunA17_Chr7g0219221 35.762 151 91 1 235 379 4 154 9.43e-26 103
Msa0939750 MtrunA17_Chr2g0323441 38.068 176 78 4 5 152 3 175 1.21e-25 103
Msa0939750 MtrunA17_Chr3g0124341 40.523 153 83 4 393 542 326 473 2.15e-25 109
Msa0939750 MtrunA17_Chr3g0124341 38.926 149 81 5 239 381 326 470 3.57e-22 99.8
Msa0939750 MtrunA17_Chr3g0124341 40.964 166 64 6 23 155 24 188 2.26e-19 91.3
Msa0939750 MtrunA17_Chr7g0219191 42.000 150 64 3 26 152 15 164 2.40e-25 104
Msa0939750 MtrunA17_Chr6g0454741 34.211 190 87 5 41 195 8 194 8.15e-23 97.4
Msa0939750 MtrunA17_Chr6g0454741 76.087 46 11 0 316 361 192 237 2.98e-16 78.6
Msa0939750 MtrunA17_Chr6g0454741 76.087 46 11 0 474 519 192 237 2.98e-16 78.6
Msa0939750 MtrunA17_Chr7g0219351 35.233 193 77 6 82 229 40 229 8.87e-22 94.4
Msa0939750 MtrunA17_Chr7g0219201 30.457 197 110 3 207 379 5 198 1.53e-20 90.1
Msa0939750 MtrunA17_Chr7g0219201 34.211 152 97 1 393 541 51 202 5.77e-20 88.6
Msa0939750 MtrunA17_Chr3g0092011 39.506 162 65 5 26 155 20 180 1.04e-19 89.4
Msa0939750 MtrunA17_Chr3g0092001 38.525 122 67 4 426 544 4 120 6.07e-19 82.8
Msa0939750 MtrunA17_Chr3g0092001 37.391 115 64 4 272 381 4 115 6.32e-16 74.3
Msa0939750 MtrunA17_Chr8g0371821 24.810 395 227 13 46 378 39 425 9.78e-17 82.8
Msa0939750 MtrunA17_Chr2g0323491 48.485 66 34 0 317 382 11 76 5.80e-13 64.7
Msa0939750 MtrunA17_Chr2g0323491 45.714 70 38 0 475 544 11 80 2.16e-12 62.8
Msa0939750 MtrunA17_Chr4g0053111 25.347 288 175 7 124 374 152 436 1.06e-12 70.1
Msa0939750 MtrunA17_Chr8g0374641 23.928 443 221 21 30 384 29 443 1.17e-12 70.1
Msa0939750 MtrunA17_Chr8g0374641 26.425 193 126 5 352 532 245 433 1.83e-11 66.2
Msa0939750 MtrunA17_Chr4g0053091 25.114 438 249 18 2 375 2 424 2.03e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0939750 AT3G29635.1 31.333 450 237 10 3 380 2 451 1.16e-61 210
Msa0939750 AT3G29635.1 37.013 154 95 2 393 544 304 457 9.51e-23 101
Msa0939750 AT3G29680.1 33.724 427 208 12 25 379 20 443 1.76e-57 199
Msa0939750 AT3G29680.1 31.847 157 95 4 393 542 297 448 9.84e-18 86.3
Msa0939750 AT5G39090.1 33.568 426 215 13 23 381 21 445 4.21e-56 195
Msa0939750 AT5G39090.1 32.886 149 98 2 396 542 300 448 6.30e-19 90.1
Msa0939750 AT5G61160.1 29.167 456 237 12 3 381 2 448 1.05e-54 191
Msa0939750 AT5G61160.1 29.412 153 102 3 393 541 300 450 2.73e-16 82.0
Msa0939750 AT3G29670.1 30.879 421 220 10 28 379 27 445 2.76e-52 185
Msa0939750 AT3G29670.1 32.432 148 98 2 398 543 304 451 1.09e-17 86.3
Msa0939750 AT5G39080.1 29.501 461 236 13 3 380 4 458 2.22e-51 182
Msa0939750 AT5G39080.1 30.822 146 98 3 393 537 314 457 1.51e-15 79.7
Msa0939750 AT5G39050.1 30.022 463 238 15 1 381 7 465 1.54e-48 175
Msa0939750 AT5G39050.1 31.333 150 98 3 396 542 321 468 9.82e-19 89.7
Msa0939750 AT3G29590.1 29.688 448 228 12 6 379 10 444 4.39e-48 173
Msa0939750 AT3G29590.1 34.783 161 78 4 398 542 300 449 2.86e-19 90.9
Msa0939750 AT1G03940.1 28.875 471 224 14 5 381 9 462 1.37e-47 172
Msa0939750 AT1G03940.1 30.719 153 103 2 393 542 313 465 7.83e-21 95.9
Msa0939750 AT1G03495.1 27.647 340 158 10 2 263 6 335 4.88e-26 109
Msa0939750 AT3G29690.1 32.680 153 86 5 237 380 31 175 1.41e-16 78.2
Msa0939750 AT3G29690.1 32.903 155 93 4 393 543 33 180 5.20e-16 76.6
Msa0939750 AT3G29636.1 28.108 185 92 5 187 369 23 168 6.37e-12 65.5

Find 72 sgRNAs with CRISPR-Local

Find 516 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAATTTCTACTATGTATAT+TGG 0.207631 6_3:+11863608 Msa0939750:CDS
TCAATTTCTACTATGTATAT+TGG 0.213712 6_3:+11871033 Msa0939750:CDS
AAGATCTTTGAAACTTTCTT+TGG 0.225581 6_3:-11862979 None:intergenic
TGTTAAATGGAGCTGAAAAT+TGG 0.251450 6_3:+11871175 Msa0939750:CDS
TAATTCCAATTCCATTATTA+TGG 0.255026 6_3:-11863283 None:intergenic
ATTCAAGTCCTTGAACAAAA+AGG 0.268365 6_3:-11871422 None:intergenic
CAATTTCTACTATGTATATT+GGG 0.289300 6_3:+11863609 Msa0939750:CDS
TGTTAAATGGAGCTGAATAT+TGG 0.292083 6_3:+11863750 Msa0939750:CDS
GAAAGTGAATGTTTAAGATT+TGG 0.309000 6_3:-11862840 None:intergenic
GGATTTGTAAATGCTTTAGA+AGG 0.320887 6_3:+11863689 Msa0939750:CDS
GGATTTGTAAATGCTTTAGA+AGG 0.320887 6_3:+11871114 Msa0939750:CDS
CAAGACCATAATAATGGAAT+TGG 0.332443 6_3:+11863278 Msa0939750:intron
TATATTGGAAATTGTATTGC+AGG 0.334002 6_3:+11871048 Msa0939750:CDS
AAAGATGTTGGAGTGTTAAA+TGG 0.336474 6_3:+11863737 Msa0939750:CDS
AAAGATGTTGGAGTGTTAAA+TGG 0.336474 6_3:+11871162 Msa0939750:CDS
GGTAAAATTTACTCTATTGC+TGG 0.339239 6_3:+11863800 Msa0939750:intron
GGTAAAATTTACTCTATTGC+TGG 0.339239 6_3:+11871225 Msa0939750:CDS
TATGGATTGTAGATCAAGAT+TGG 0.348320 6_3:+11863580 Msa0939750:CDS
TATGGATTGTAGATCAAGAT+TGG 0.348320 6_3:+11871005 Msa0939750:CDS
CAACACTTTCTCCCTCTTGC+TGG 0.361140 6_3:+11862873 Msa0939750:CDS
GTTAAATGGAGCTGAATATT+GGG 0.363527 6_3:+11863751 Msa0939750:CDS
TTGATACAAGACCATAATAA+TGG 0.367593 6_3:+11863272 Msa0939750:intron
AACAATGGTGGAATTGAGAT+TGG 0.373662 6_3:+11863935 Msa0939750:CDS
AACAATGGTGGAATTGAGAT+TGG 0.373662 6_3:+11871360 Msa0939750:CDS
AGTGAAGTTGGTGATGAAAA+AGG 0.373809 6_3:-11862711 None:intergenic
TTAACTACATCATGTTTCAT+TGG 0.375298 6_3:-11863383 None:intergenic
ACACACCATGCTGCTTTAGA+TGG 0.377821 6_3:+11863134 Msa0939750:CDS
GTTAAATGGAGCTGAAAATT+GGG 0.387315 6_3:+11871176 Msa0939750:CDS
TATATTGGGAATTGTATTGC+AGG 0.401235 6_3:+11863623 Msa0939750:CDS
TCCATAGAAATTATGAAAAC+CGG 0.410535 6_3:-11870988 None:intergenic
TTTGAAAATTTATCATGAAA+AGG 0.420249 6_3:+11863049 Msa0939750:CDS
TGGGTTTCTAATATGTATAG+TGG 0.431498 6_3:+11871195 Msa0939750:CDS
GATTGGTTTGGCTTTAAGTA+AGG 0.439820 6_3:+11863952 Msa0939750:CDS
GATTGGTTTGGCTTTAAGTA+AGG 0.439820 6_3:+11871377 Msa0939750:CDS
ATGACTTCAACTGATAAAAC+AGG 0.450314 6_3:+11863884 Msa0939750:CDS
ATGACTTCAACTGATAAAAC+AGG 0.450314 6_3:+11871309 Msa0939750:CDS
GTACTATAAAACTCAAACCT+TGG 0.458161 6_3:-11863827 None:intergenic
GTACTATAAAACTCAAACCT+TGG 0.458161 6_3:-11871252 None:intergenic
TTGAATAGTGTGAAAGATGT+TGG 0.459417 6_3:+11863725 Msa0939750:CDS
TTGAATAGTGTGAAAGATGT+TGG 0.459417 6_3:+11871150 Msa0939750:CDS
AATATGTATAGTGGAATTGA+AGG 0.478268 6_3:+11871204 Msa0939750:CDS
TAGAAGAAGAGAAGTTCAAC+TGG 0.490649 6_3:-11862774 None:intergenic
AAAGTGAGTGGAAGTGAAGT+TGG 0.513468 6_3:-11862723 None:intergenic
TTTGAGACAAAGAACTTGGT+TGG 0.518680 6_3:+11863659 Msa0939750:CDS
TTTGAGACAAAGAACTTGGT+TGG 0.518680 6_3:+11871084 Msa0939750:CDS
TGGTGGAATTGAGATTGGTT+TGG 0.519435 6_3:+11863940 Msa0939750:CDS
TGGTGGAATTGAGATTGGTT+TGG 0.519435 6_3:+11871365 Msa0939750:CDS
AGCAAAAGCAGAACAACCTA+AGG 0.533952 6_3:+11863532 Msa0939750:intron
AGCAAAAGCAGAACAACCTA+AGG 0.533952 6_3:+11870953 Msa0939750:intron
GATTTGTAAATGCTTTAGAA+GGG 0.534694 6_3:+11863690 Msa0939750:CDS
GATTTGTAAATGCTTTAGAA+GGG 0.534694 6_3:+11871115 Msa0939750:CDS
GTTGCTTTGTTTCCAAACAA+TGG 0.539406 6_3:+11863092 Msa0939750:CDS
GAAAGTAGGAATAACAATGG+TGG 0.573498 6_3:+11863923 Msa0939750:CDS
GAAAGTAGGAATAACAATGG+TGG 0.573498 6_3:+11871348 Msa0939750:CDS
TATACATAGTAGAAATTGAA+GGG 0.573548 6_3:-11863604 None:intergenic
GGCTTTAAGTAAGGAAGACA+TGG 0.574320 6_3:+11863961 Msa0939750:CDS
GGCTTTAAGTAAGGAAGACA+TGG 0.574320 6_3:+11871386 Msa0939750:CDS
ATTCAAAAGCTTAAAGAACA+TGG 0.580692 6_3:+11863434 Msa0939750:CDS
TGTGTTTGAGACAAAGAACT+TGG 0.581075 6_3:+11863655 Msa0939750:CDS
TGTGTTTGAGACAAAGAACT+TGG 0.581075 6_3:+11871080 Msa0939750:CDS
AAAAGATCAAAGAAAGTGAG+TGG 0.584138 6_3:-11862735 None:intergenic
ACTCTATTGCTGGATCTCCA+AGG 0.593370 6_3:+11863810 Msa0939750:CDS
ACTCTATTGCTGGATCTCCA+AGG 0.593370 6_3:+11871235 Msa0939750:CDS
CAAATTATGTTACCAGCAAG+AGG 0.594605 6_3:-11862885 None:intergenic
TATACATAGTAGAAATTGAA+CGG 0.599138 6_3:-11871029 None:intergenic
ATATACATAGTAGAAATTGA+AGG 0.602424 6_3:-11863605 None:intergenic
GTTGTTGATTTGTTGAAACA+TGG 0.605909 6_3:+11863317 Msa0939750:CDS
AAGAAGAGAAGTTCAACTGG+TGG 0.614324 6_3:-11862771 None:intergenic
GGTGAAAGTAGGAATAACAA+TGG 0.647980 6_3:+11863920 Msa0939750:CDS
GGTGAAAGTAGGAATAACAA+TGG 0.647980 6_3:+11871345 Msa0939750:CDS
GTTGATTTGTTGAAACATGG+TGG 0.651372 6_3:+11863320 Msa0939750:CDS
AAATTATGTTACCAGCAAGA+GGG 0.657111 6_3:-11862884 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATAATATGAAAATGA+AGG + chr6_3:11863457-11863476 Msa0939750:CDS 10.0%
!!! TTACTTTTCTATTTTAAATT+AGG + chr6_3:11865140-11865159 Msa0939750:intron 10.0%
!!! TACTTTTCTATTTTAAATTA+GGG + chr6_3:11865141-11865160 Msa0939750:intron 10.0%
!!! TTTGAATTTATATTTTTTTG+TGG - chr6_3:11865825-11865844 None:intergenic 10.0%
!!! CACTATTTTTTTATTAATAA+TGG + chr6_3:11866302-11866321 Msa0939750:intron 10.0%
!!! TATTTTTCTATTTTTTACAA+GGG - chr6_3:11866682-11866701 None:intergenic 10.0%
!!! TTATTTTTCTATTTTTTACA+AGG - chr6_3:11866683-11866702 None:intergenic 10.0%
!! AAAACCTAAAATAAAAATAA+CGG - chr6_3:11866974-11866993 None:intergenic 10.0%
!! AAAAAAATTATTGAAAATGT+AGG + chr6_3:11867204-11867223 Msa0939750:intron 10.0%
!! AAAAAATTATTGAAAATGTA+GGG + chr6_3:11867205-11867224 Msa0939750:intron 10.0%
!!! ATAGTTATAGATTTTTTTTT+GGG - chr6_3:11867826-11867845 None:intergenic 10.0%
!!! AATAGTTATAGATTTTTTTT+TGG - chr6_3:11867827-11867846 None:intergenic 10.0%
!! AAAAAAAAATCTATAACTAT+TGG + chr6_3:11867826-11867845 Msa0939750:intron 10.0%
!!! TTGAAAAAATCTAATTTTTT+TGG - chr6_3:11868154-11868173 None:intergenic 10.0%
!!! ATAATATTATAAACTTTTTC+TGG + chr6_3:11868275-11868294 Msa0939750:intron 10.0%
!! ACTATTAATCATATAAAATA+GGG - chr6_3:11868463-11868482 None:intergenic 10.0%
!! AACTATTAATCATATAAAAT+AGG - chr6_3:11868464-11868483 None:intergenic 10.0%
!!! ACTATTTTCTTAATTTAAAT+GGG + chr6_3:11869568-11869587 Msa0939750:intron 10.0%
!! ATTAGAATTAAATACATTAA+TGG + chr6_3:11870623-11870642 Msa0939750:intron 10.0%
!! AAAAAATAATATGAAAATGA+AGG + chr6_3:11863457-11863476 Msa0939750:CDS 10.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr6_3:11867247-11867266 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr6_3:11867247-11867266 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr6_3:11867247-11867266 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr6_3:11867247-11867266 None:intergenic 100.0%
!! TTTGAAAATTTATCATGAAA+AGG + chr6_3:11863049-11863068 Msa0939750:CDS 15.0%
!!! TTAAACTTTGAAACTTTAAA+TGG - chr6_3:11864023-11864042 None:intergenic 15.0%
!! TGATTAACACTTAAAAATTA+TGG + chr6_3:11864411-11864430 Msa0939750:intron 15.0%
!!! TAGTCTCTTTAAAAAAATTA+AGG + chr6_3:11865520-11865539 Msa0939750:intron 15.0%
!! TTAAGGTTGTTATATAAAAA+TGG + chr6_3:11865537-11865556 Msa0939750:intron 15.0%
!! TAAGGTTGTTATATAAAAAT+GGG + chr6_3:11865538-11865557 Msa0939750:intron 15.0%
!! TACATTACATTATATATGTA+AGG + chr6_3:11865777-11865796 Msa0939750:intron 15.0%
!!! AAACATAAAATGTGTTTTTA+AGG - chr6_3:11865958-11865977 None:intergenic 15.0%
!!! GAATATAATTTAGTTCTTAA+TGG - chr6_3:11866946-11866965 None:intergenic 15.0%
!! AAACCTAAAATAAAAATAAC+GGG - chr6_3:11866973-11866992 None:intergenic 15.0%
!!! ATTTTAATCAGATTAATTGA+GGG + chr6_3:11867121-11867140 Msa0939750:intron 15.0%
!! TATGTTTCATAAACTATATA+TGG - chr6_3:11867155-11867174 None:intergenic 15.0%
!! AAAAATTATTGAAAATGTAG+GGG + chr6_3:11867206-11867225 Msa0939750:intron 15.0%
!!! ACATATTTTCATTTGAAATA+TGG + chr6_3:11867699-11867718 Msa0939750:intron 15.0%
!!! TAGTTATAGATTTTTTTTTG+GGG - chr6_3:11867825-11867844 None:intergenic 15.0%
!!! TTTGTTTTGACAATAATAAA+GGG - chr6_3:11867881-11867900 None:intergenic 15.0%
!!! TCTTTTGAAGAATATTTTAT+AGG + chr6_3:11867988-11868007 Msa0939750:intron 15.0%
!!! CTTTTGAAGAATATTTTATA+GGG + chr6_3:11867989-11868008 Msa0939750:intron 15.0%
!!! AAAAAAGCTAATGTAATTTT+TGG - chr6_3:11868926-11868945 None:intergenic 15.0%
!! CATTTAAATTAAGAAAATAG+TGG - chr6_3:11869569-11869588 None:intergenic 15.0%
!!! CACTATTTTCTTAATTTAAA+TGG + chr6_3:11869567-11869586 Msa0939750:intron 15.0%
!! TTCAATAACAACAATAATTA+AGG + chr6_3:11870461-11870480 Msa0939750:intron 15.0%
!! GATAAAATAGTTTAAATGAA+AGG + chr6_3:11870483-11870502 Msa0939750:intron 15.0%
!!! TCATGATAAATTTTCAAATG+TGG - chr6_3:11863047-11863066 None:intergenic 20.0%
!!! TAAGTACTTTTATGAAATCA+TGG + chr6_3:11863165-11863184 Msa0939750:intron 20.0%
!! ATGATAAAAAAGATGAATCA+AGG - chr6_3:11863217-11863236 None:intergenic 20.0%
!! ATCAATGATCTATCAAAAAA+AGG - chr6_3:11863257-11863276 None:intergenic 20.0%
!! TAATTCCAATTCCATTATTA+TGG - chr6_3:11863286-11863305 None:intergenic 20.0%
!! TATACATAGTAGAAATTGAA+GGG - chr6_3:11863607-11863626 None:intergenic 20.0%
!! ATATACATAGTAGAAATTGA+AGG - chr6_3:11863608-11863627 None:intergenic 20.0%
!! TCAATTTCTACTATGTATAT+TGG + chr6_3:11863608-11863627 Msa0939750:CDS 20.0%
!! CAATTTCTACTATGTATATT+GGG + chr6_3:11863609-11863628 Msa0939750:CDS 20.0%
!!! CTCTTCATATTTTTATAACA+TGG + chr6_3:11864141-11864160 Msa0939750:intron 20.0%
!! TAACAAAAATTCACTAATCA+CGG - chr6_3:11864201-11864220 None:intergenic 20.0%
!! ATTGATTACAAAACTATTCT+CGG + chr6_3:11864738-11864757 Msa0939750:intron 20.0%
!!! AAAGATAAAAGCACAATATA+TGG - chr6_3:11864951-11864970 None:intergenic 20.0%
!!! TCTCATGATATATACATTTT+GGG + chr6_3:11865074-11865093 Msa0939750:intron 20.0%
!! GATTATTAGATAATACATGA+TGG - chr6_3:11865350-11865369 None:intergenic 20.0%
!!! TGTGTTTTTAATTTCTTTGT+AGG - chr6_3:11865574-11865593 None:intergenic 20.0%
!! TACATTATATATGTAAGGTT+TGG + chr6_3:11865782-11865801 Msa0939750:intron 20.0%
!!! GAATTTATATTTTTTTGTGG+TGG - chr6_3:11865822-11865841 None:intergenic 20.0%
!!! ATAAAATGTGTTTTTAAGGA+AGG - chr6_3:11865954-11865973 None:intergenic 20.0%
!!! AAAAACACATTTTATGTTTG+AGG + chr6_3:11865959-11865978 Msa0939750:intron 20.0%
!! ACAAGACATAAAAGTTAATT+GGG - chr6_3:11866219-11866238 None:intergenic 20.0%
!!! AAACAATTCTTTGAAGTATA+AGG + chr6_3:11866386-11866405 Msa0939750:intron 20.0%
!!! TCTTAATGGATTTTATTCTA+TGG - chr6_3:11866932-11866951 None:intergenic 20.0%
!!! AAACCCGTTATTTTTATTTT+AGG + chr6_3:11866967-11866986 Msa0939750:intron 20.0%
!!! ATTCCATTTAAAATATGATG+TGG + chr6_3:11867057-11867076 Msa0939750:intron 20.0%
!!! TTTCCACATCATATTTTAAA+TGG - chr6_3:11867063-11867082 None:intergenic 20.0%
!!! ATTTAAAATATGATGTGGAA+AGG + chr6_3:11867062-11867081 Msa0939750:intron 20.0%
!! ATTAGATTAATTGACAACTA+TGG - chr6_3:11867089-11867108 None:intergenic 20.0%
!! TGTCAATTAATCTAATAACA+TGG + chr6_3:11867093-11867112 Msa0939750:intron 20.0%
!!! CATTTTAATCAGATTAATTG+AGG + chr6_3:11867120-11867139 Msa0939750:intron 20.0%
!!! TTTTAATCAGATTAATTGAG+GGG + chr6_3:11867122-11867141 Msa0939750:intron 20.0%
!! TCATAAACTATATATGGTTA+TGG - chr6_3:11867149-11867168 None:intergenic 20.0%
!! AAAATTATTGAAAATGTAGG+GGG + chr6_3:11867207-11867226 Msa0939750:intron 20.0%
!!! TTTATTTTCTTGTTTGTGTA+AGG - chr6_3:11867351-11867370 None:intergenic 20.0%
!!! TTATTCAATAACTCTTGTTT+GGG - chr6_3:11867475-11867494 None:intergenic 20.0%
!! GGAAAAAAAAAATCAAACAT+AGG - chr6_3:11867510-11867529 None:intergenic 20.0%
!!! GTTTGTTTTGACAATAATAA+AGG - chr6_3:11867882-11867901 None:intergenic 20.0%
!! AAAAGTGATGTGTTAATAAA+GGG - chr6_3:11867904-11867923 None:intergenic 20.0%
!! AAAAAGTGATGTGTTAATAA+AGG - chr6_3:11867905-11867924 None:intergenic 20.0%
!!! TATAGGGTTCAATATTTTTT+TGG + chr6_3:11868005-11868024 Msa0939750:intron 20.0%
!!! GAAAAGTTGGTATATTATTA+GGG - chr6_3:11868032-11868051 None:intergenic 20.0%
!!! TGAAAAGTTGGTATATTATT+AGG - chr6_3:11868033-11868052 None:intergenic 20.0%
!!! ACATGATTTTACTTAAAAAG+AGG + chr6_3:11868327-11868346 Msa0939750:intron 20.0%
!!! CATGATTTTACTTAAAAAGA+GGG + chr6_3:11868328-11868347 Msa0939750:intron 20.0%
!!! ATTGTGATTTTTTTCCTTAT+TGG + chr6_3:11868484-11868503 Msa0939750:intron 20.0%
!! AATAGTAAATTTAGCCAATA+AGG - chr6_3:11868501-11868520 None:intergenic 20.0%
!! AAAAAAAAAGAGAACTTCAT+TGG - chr6_3:11868884-11868903 None:intergenic 20.0%
!!! AAATTACATTAGCTTTTTTG+AGG + chr6_3:11868927-11868946 Msa0939750:intron 20.0%
!! TTAAATTAAGAAAATAGTGG+TGG - chr6_3:11869566-11869585 None:intergenic 20.0%
!!! ATATTAACAAGAAAGCATAT+AGG - chr6_3:11869647-11869666 None:intergenic 20.0%
!! GTTTAAATGAAAGGTAAAAT+AGG + chr6_3:11870492-11870511 Msa0939750:intron 20.0%
!!! TTAAGCTTTTGAATATTTGA+AGG - chr6_3:11863428-11863447 None:intergenic 20.0%
!! TATACATAGTAGAAATTGAA+CGG - chr6_3:11863607-11863626 None:intergenic 20.0%
!! TCAATTTCTACTATGTATAT+TGG + chr6_3:11863608-11863627 Msa0939750:CDS 20.0%
!! TCACTTTCTTTGATCTTTTA+TGG + chr6_3:11862739-11862758 Msa0939750:CDS 25.0%
!! GAAAGTGAATGTTTAAGATT+TGG - chr6_3:11862843-11862862 None:intergenic 25.0%
!!! AAGATCTTTGAAACTTTCTT+TGG - chr6_3:11862982-11863001 None:intergenic 25.0%
!!! AAAAAAGGTGTTAGATTTTC+AGG - chr6_3:11863242-11863261 None:intergenic 25.0%
! TTGATACAAGACCATAATAA+TGG + chr6_3:11863272-11863291 Msa0939750:intron 25.0%
! CAGAAAAATTCATAATCTTG+AGG - chr6_3:11863361-11863380 None:intergenic 25.0%
!! CTCAAGATTATGAATTTTTC+TGG + chr6_3:11863359-11863378 Msa0939750:CDS 25.0%
! TTAACTACATCATGTTTCAT+TGG - chr6_3:11863386-11863405 None:intergenic 25.0%
! ATTCAAAAGCTTAAAGAACA+TGG + chr6_3:11863434-11863453 Msa0939750:CDS 25.0%
!! AGTGGTTTTCATAATTTCTA+TGG + chr6_3:11863562-11863581 Msa0939750:CDS 25.0%
!!! GATTTGTAAATGCTTTAGAA+GGG + chr6_3:11863690-11863709 Msa0939750:CDS 25.0%
!! AATATGTATAGTGGAATTGA+AGG + chr6_3:11863779-11863798 Msa0939750:intron 25.0%
!!! GAGTTTTATAGTACTGATTT+TGG + chr6_3:11863836-11863855 Msa0939750:CDS 25.0%
!!! TATAGTACTGATTTTGGATT+TGG + chr6_3:11863842-11863861 Msa0939750:CDS 25.0%
!!! GAAGTCATATCAACTTTTTT+TGG - chr6_3:11863872-11863891 None:intergenic 25.0%
! AACAAAAATTCACTAATCAC+GGG - chr6_3:11864200-11864219 None:intergenic 25.0%
!! GTGATTAGTGAATTTTTGTT+AGG + chr6_3:11864200-11864219 Msa0939750:intron 25.0%
!! TTAGTGAATTTTTGTTAGGA+TGG + chr6_3:11864204-11864223 Msa0939750:intron 25.0%
!!! AATTTTTGTTAGGATGGATT+AGG + chr6_3:11864210-11864229 Msa0939750:intron 25.0%
!!! ATTTTTGTTAGGATGGATTA+GGG + chr6_3:11864211-11864230 Msa0939750:intron 25.0%
! TCTCATAAATACAACTTAGT+TGG + chr6_3:11864589-11864608 Msa0939750:intron 25.0%
! TTCTTCACTCTTTCATATTT+AGG + chr6_3:11864655-11864674 Msa0939750:intron 25.0%
! GTAATCAATCACAATATAAC+TGG - chr6_3:11864727-11864746 None:intergenic 25.0%
! TTGATTACAAAACTATTCTC+GGG + chr6_3:11864739-11864758 Msa0939750:intron 25.0%
!! TTTTTGTCTTATACGATGTT+TGG - chr6_3:11864888-11864907 None:intergenic 25.0%
! AATACCATAAAATGTTGTCT+TGG + chr6_3:11864916-11864935 Msa0939750:intron 25.0%
! ATACCATAAAATGTTGTCTT+GGG + chr6_3:11864917-11864936 Msa0939750:intron 25.0%
! AAATGTATATATCATGAGAG+CGG - chr6_3:11865073-11865092 None:intergenic 25.0%
!! CTCTCATGATATATACATTT+TGG + chr6_3:11865073-11865092 Msa0939750:intron 25.0%
! CACAAGACATAAAAGTTAAT+TGG - chr6_3:11866220-11866239 None:intergenic 25.0%
!!! TCTCCTTGACTTTAAAATTA+TGG - chr6_3:11866425-11866444 None:intergenic 25.0%
!!! TACAAGTATTGACTTAATAG+TGG + chr6_3:11866616-11866635 Msa0939750:intron 25.0%
! TCTACTTAATAATCAAACTC+AGG - chr6_3:11866764-11866783 None:intergenic 25.0%
!! ACCAAATTTTACTTAACTCT+CGG + chr6_3:11866786-11866805 Msa0939750:intron 25.0%
! GAACAAACTAGACAAAATAA+AGG + chr6_3:11867394-11867413 Msa0939750:intron 25.0%
!! TATTCAATAACTCTTGTTTG+GGG - chr6_3:11867474-11867493 None:intergenic 25.0%
! CTTATTCAATAACTCTTGTT+TGG - chr6_3:11867476-11867495 None:intergenic 25.0%
! AGAGTTATTGAATAAGTACT+TGG + chr6_3:11867480-11867499 Msa0939750:intron 25.0%
!!! CTCCTATGTTTGATTTTATT+AGG + chr6_3:11867651-11867670 Msa0939750:intron 25.0%
! CACCTAATAAAATCAAACAT+AGG - chr6_3:11867656-11867675 None:intergenic 25.0%
!!! CTATGTTTGATTTTATTAGG+TGG + chr6_3:11867654-11867673 Msa0939750:intron 25.0%
! ATTACATGATTCCATCTTAT+AGG + chr6_3:11867722-11867741 Msa0939750:intron 25.0%
! AAAGTGTAGTTAAATCTGTT+TGG - chr6_3:11867853-11867872 None:intergenic 25.0%
!!! AGTCGAAGAAATTTTTTAGA+GGG - chr6_3:11868063-11868082 None:intergenic 25.0%
!!! AAGTCGAAGAAATTTTTTAG+AGG - chr6_3:11868064-11868083 None:intergenic 25.0%
! TGGTGATTGAAAATTGTATA+CGG - chr6_3:11868092-11868111 None:intergenic 25.0%
!! AAGTTTTTCATCTTCACTTT+TGG - chr6_3:11868355-11868374 None:intergenic 25.0%
!! AAGTGAAGATGAAAAACTTT+TGG + chr6_3:11868356-11868375 Msa0939750:intron 25.0%
!! AGTGAAGATGAAAAACTTTT+GGG + chr6_3:11868357-11868376 Msa0939750:intron 25.0%
!! AAATCGAAGAAAGATTTTAG+AGG + chr6_3:11868388-11868407 Msa0939750:intron 25.0%
!! AATCGAAGAAAGATTTTAGA+GGG + chr6_3:11868389-11868408 Msa0939750:intron 25.0%
!! TATCAGCACTGAAATAATAA+TGG + chr6_3:11868666-11868685 Msa0939750:intron 25.0%
! TTGATACCATAACTTGAAAT+GGG - chr6_3:11868759-11868778 None:intergenic 25.0%
! ATTGATACCATAACTTGAAA+TGG - chr6_3:11868760-11868779 None:intergenic 25.0%
! CTGAAAGATTTATTATCCAT+GGG - chr6_3:11869201-11869220 None:intergenic 25.0%
! ACTTGAAGAAGAAATCTATA+TGG - chr6_3:11869230-11869249 None:intergenic 25.0%
!!! TGTTAAAACCGCTTTTTAAA+TGG - chr6_3:11869256-11869275 None:intergenic 25.0%
! TAATTTAGATGTACACCAAA+TGG - chr6_3:11869280-11869299 None:intergenic 25.0%
!! AGAATCCATCTCATATTTTA+TGG + chr6_3:11869380-11869399 Msa0939750:intron 25.0%
!! ACATATCAAGAGAGAATTTT+TGG + chr6_3:11869845-11869864 Msa0939750:intron 25.0%
! TTGATACCATAACTTGAAAT+GGG - chr6_3:11868759-11868778 None:intergenic 25.0%
! ATTGATACCATAACTTGAAA+TGG - chr6_3:11868760-11868779 None:intergenic 25.0%
!! AACAATTTTGTACTTTCACT+AGG - chr6_3:11870543-11870562 None:intergenic 25.0%
! GATTTATAAGTTTACGTTCA+AGG + chr6_3:11870575-11870594 Msa0939750:intron 25.0%
! GAATTAAATACATTAATGGC+TGG + chr6_3:11870627-11870646 Msa0939750:intron 25.0%
!! ACGTTTTTGACCAAAATTAA+TGG + chr6_3:11870677-11870696 Msa0939750:intron 25.0%
! ATTCAAAAGCTTAAAGAACA+TGG + chr6_3:11863434-11863453 Msa0939750:CDS 25.0%
! TCCATAGAAATTATGAAAAC+CGG - chr6_3:11863566-11863585 None:intergenic 25.0%
! TATATTGGAAATTGTATTGC+AGG + chr6_3:11871048-11871067 Msa0939750:CDS 25.0%
!!! GATTTGTAAATGCTTTAGAA+GGG + chr6_3:11863690-11863709 Msa0939750:CDS 25.0%
!! AATATGTATAGTGGAATTGA+AGG + chr6_3:11863779-11863798 Msa0939750:intron 25.0%
!!! GAGTTTTATAGTACTGATTT+TGG + chr6_3:11863836-11863855 Msa0939750:CDS 25.0%
!!! TATAGTACTGATTTTGGATT+TGG + chr6_3:11863842-11863861 Msa0939750:CDS 25.0%
!!! GAAGTCATATCAACTTTTTT+TGG - chr6_3:11863872-11863891 None:intergenic 25.0%
AAAAGATCAAAGAAAGTGAG+TGG - chr6_3:11862738-11862757 None:intergenic 30.0%
AAATTATGTTACCAGCAAGA+GGG - chr6_3:11862887-11862906 None:intergenic 30.0%
! GACATAGTTTATGATTGGTT+TGG - chr6_3:11862925-11862944 None:intergenic 30.0%
ACCAATCATAAACTATGTCA+AGG + chr6_3:11862926-11862945 Msa0939750:intron 30.0%
CCAATCATAAACTATGTCAA+GGG + chr6_3:11862927-11862946 Msa0939750:intron 30.0%
AGAATTAGAACATGCAACAT+AGG - chr6_3:11863192-11863211 None:intergenic 30.0%
! CAAGACCATAATAATGGAAT+TGG + chr6_3:11863278-11863297 Msa0939750:intron 30.0%
!! GTTGTTGATTTGTTGAAACA+TGG + chr6_3:11863317-11863336 Msa0939750:CDS 30.0%
! ATCTTGAGGCTTTTATTATC+TGG - chr6_3:11863347-11863366 None:intergenic 30.0%
! AGTTACAAGTGCTTATGTTT+TGG + chr6_3:11863502-11863521 Msa0939750:intron 30.0%
!!! AAAACCACTTTTTCAACCTT+AGG - chr6_3:11863551-11863570 None:intergenic 30.0%
! TATGGATTGTAGATCAAGAT+TGG + chr6_3:11863580-11863599 Msa0939750:CDS 30.0%
TATATTGGGAATTGTATTGC+AGG + chr6_3:11863623-11863642 Msa0939750:CDS 30.0%
AAGAACTTGGTTGGAAAAAA+TGG + chr6_3:11863668-11863687 Msa0939750:CDS 30.0%
! GGATTTGTAAATGCTTTAGA+AGG + chr6_3:11863689-11863708 Msa0939750:CDS 30.0%
TTGAATAGTGTGAAAGATGT+TGG + chr6_3:11863725-11863744 Msa0939750:CDS 30.0%
! AAAGATGTTGGAGTGTTAAA+TGG + chr6_3:11863737-11863756 Msa0939750:CDS 30.0%
TGTTAAATGGAGCTGAATAT+TGG + chr6_3:11863750-11863769 Msa0939750:CDS 30.0%
GTTAAATGGAGCTGAATATT+GGG + chr6_3:11863751-11863770 Msa0939750:CDS 30.0%
TGGGTTTCTAATATGTATAG+TGG + chr6_3:11863770-11863789 Msa0939750:intron 30.0%
GGTAAAATTTACTCTATTGC+TGG + chr6_3:11863800-11863819 Msa0939750:intron 30.0%
GTACTATAAAACTCAAACCT+TGG - chr6_3:11863830-11863849 None:intergenic 30.0%
ATGACTTCAACTGATAAAAC+AGG + chr6_3:11863884-11863903 Msa0939750:CDS 30.0%
! TTTTCTACCCTTTTTGTTCA+AGG + chr6_3:11863989-11864008 Msa0939750:intron 30.0%
TTCAAGTCCTTGAACAAAAA+GGG - chr6_3:11863999-11864018 None:intergenic 30.0%
ATTCAAGTCCTTGAACAAAA+AGG - chr6_3:11864000-11864019 None:intergenic 30.0%
TCATGACAAAATAGATCAAG+TGG - chr6_3:11864242-11864261 None:intergenic 30.0%
AAAAAAGATGTAAAGACTGG+GGG - chr6_3:11864341-11864360 None:intergenic 30.0%
GAAAAAAGATGTAAAGACTG+GGG - chr6_3:11864342-11864361 None:intergenic 30.0%
CGAAAAAAGATGTAAAGACT+GGG - chr6_3:11864343-11864362 None:intergenic 30.0%
ACGAAAAAAGATGTAAAGAC+TGG - chr6_3:11864344-11864363 None:intergenic 30.0%
ATTGTATCGTGATTTAGAGA+GGG - chr6_3:11864814-11864833 None:intergenic 30.0%
AATTGTATCGTGATTTAGAG+AGG - chr6_3:11864815-11864834 None:intergenic 30.0%
!! TGTGTGTTTGTTATGCTAAA+AGG - chr6_3:11864982-11865001 None:intergenic 30.0%
AATGTATATATCATGAGAGC+GGG - chr6_3:11865072-11865091 None:intergenic 30.0%
!! ATATACATTTTGGGTGTGTT+TGG + chr6_3:11865083-11865102 Msa0939750:intron 30.0%
GAATTTGTGAACAACATGAT+TGG + chr6_3:11865882-11865901 Msa0939750:intron 30.0%
CAACATGATTGGATGTTTAT+TGG + chr6_3:11865893-11865912 Msa0939750:intron 30.0%
AGAGAACATAAACGTGAAAA+AGG + chr6_3:11866122-11866141 Msa0939750:intron 30.0%
! GCTAGAAGAAATGAGTTTTA+GGG + chr6_3:11866171-11866190 Msa0939750:intron 30.0%
!!! AGTTTTAGGGTTTTTAAGTG+TGG + chr6_3:11866184-11866203 Msa0939750:intron 30.0%
TCGTGATTAGTAACAATAAC+CGG + chr6_3:11866248-11866267 Msa0939750:intron 30.0%
!! TTCTTTGAAGTATAAGGTGT+AGG + chr6_3:11866392-11866411 Msa0939750:intron 30.0%
!! TCTTTGAAGTATAAGGTGTA+GGG + chr6_3:11866393-11866412 Msa0939750:intron 30.0%
!!! GAGCCATAATTTTAAAGTCA+AGG + chr6_3:11866419-11866438 Msa0939750:intron 30.0%
!!! AACACTTTTTTTAGCGAACA+AGG + chr6_3:11866457-11866476 Msa0939750:intron 30.0%
TATTAACCCTATGATTTCCA+GGG - chr6_3:11866841-11866860 None:intergenic 30.0%
TTTGCAAACCTATATCATTG+TGG + chr6_3:11867031-11867050 Msa0939750:intron 30.0%
!! AACTTTTTCTTTTCTCTCTG+AGG - chr6_3:11867292-11867311 None:intergenic 30.0%
TAGACAAAATAAAGGAGTAG+TGG + chr6_3:11867402-11867421 Msa0939750:intron 30.0%
AGATTCACATACATTATGTG+TGG + chr6_3:11867546-11867565 Msa0939750:intron 30.0%
TTGTTAATGTGTTCATTCTC+CGG - chr6_3:11867750-11867769 None:intergenic 30.0%
CTACACAATTTCGTTAAAAG+TGG - chr6_3:11868112-11868131 None:intergenic 30.0%
TGAAAATGTGAAGGAATGTA+AGG + chr6_3:11868592-11868611 Msa0939750:intron 30.0%
TCTATGTCACCAAAAAGAAA+AGG + chr6_3:11868709-11868728 Msa0939750:intron 30.0%
!! TAATCTCCCATTTCAAGTTA+TGG + chr6_3:11868750-11868769 Msa0939750:intron 30.0%
ATAGACGACTTACTCATATT+TGG - chr6_3:11869016-11869035 None:intergenic 30.0%
GTCAAACATTTCATGTCATT+TGG + chr6_3:11869121-11869140 Msa0939750:intron 30.0%
ATGTTAGATAAGTCTCTGTA+TGG - chr6_3:11869160-11869179 None:intergenic 30.0%
CCTGAAAGATTTATTATCCA+TGG - chr6_3:11869202-11869221 None:intergenic 30.0%
CCATGGATAATAAATCTTTC+AGG + chr6_3:11869199-11869218 Msa0939750:intron 30.0%
CAAGTTCACCATTTAAAAAG+CGG + chr6_3:11869245-11869264 Msa0939750:intron 30.0%
TGAATAGCAGAAAGATCAAT+TGG + chr6_3:11869300-11869319 Msa0939750:intron 30.0%
AGAAGCCATAAAATATGAGA+TGG - chr6_3:11869388-11869407 None:intergenic 30.0%
! CATATTTTATGGCTTCTTGA+AGG + chr6_3:11869391-11869410 Msa0939750:intron 30.0%
! ACTAGTTGCTAAAGAGTATA+TGG - chr6_3:11869445-11869464 None:intergenic 30.0%
TGAGGAATGAGTCTATTTAT+AGG + chr6_3:11869880-11869899 Msa0939750:intron 30.0%
! TATCAGCACTGAAATGATAA+TGG + chr6_3:11870114-11870133 Msa0939750:intron 30.0%
TCTATGTCACCAAAAAGAAA+AGG + chr6_3:11868709-11868728 Msa0939750:intron 30.0%
!! TAATCTCCCATTTCAAGTTA+TGG + chr6_3:11868750-11868769 Msa0939750:intron 30.0%
TAATCTCCTATACATGTAGA+CGG + chr6_3:11870282-11870301 Msa0939750:intron 30.0%
TTTGACCAAAATTAATGGCT+AGG + chr6_3:11870682-11870701 Msa0939750:intron 30.0%
! AATTGCCTAGCCATTAATTT+TGG - chr6_3:11870690-11870709 None:intergenic 30.0%
TAGTGGAGCAATTAATGTAT+AGG - chr6_3:11870719-11870738 None:intergenic 30.0%
ACATTAATTGCTCCACTAAA+CGG + chr6_3:11870721-11870740 Msa0939750:intron 30.0%
! AGTTACAAGTGCTTATGTTT+TGG + chr6_3:11863502-11863521 Msa0939750:intron 30.0%
! TATGGATTGTAGATCAAGAT+TGG + chr6_3:11863580-11863599 Msa0939750:CDS 30.0%
AAGAACTTGGTTGGAAAAAA+TGG + chr6_3:11863668-11863687 Msa0939750:CDS 30.0%
! GGATTTGTAAATGCTTTAGA+AGG + chr6_3:11863689-11863708 Msa0939750:CDS 30.0%
TTGAATAGTGTGAAAGATGT+TGG + chr6_3:11863725-11863744 Msa0939750:CDS 30.0%
! AAAGATGTTGGAGTGTTAAA+TGG + chr6_3:11863737-11863756 Msa0939750:CDS 30.0%
TGTTAAATGGAGCTGAAAAT+TGG + chr6_3:11871175-11871194 Msa0939750:CDS 30.0%
GTTAAATGGAGCTGAAAATT+GGG + chr6_3:11871176-11871195 Msa0939750:CDS 30.0%
TGGGTTTCTAATATGTATAG+TGG + chr6_3:11863770-11863789 Msa0939750:intron 30.0%
GGTAAAATTTACTCTATTGC+TGG + chr6_3:11863800-11863819 Msa0939750:intron 30.0%
GTACTATAAAACTCAAACCT+TGG - chr6_3:11863830-11863849 None:intergenic 30.0%
ATGACTTCAACTGATAAAAC+AGG + chr6_3:11863884-11863903 Msa0939750:CDS 30.0%
! TTTTCTACCCTTTTTGTTCA+AGG + chr6_3:11863989-11864008 Msa0939750:intron 30.0%
TTCAAGTCCTTGAACAAAAA+GGG - chr6_3:11863999-11864018 None:intergenic 30.0%
ATTCAAGTCCTTGAACAAAA+AGG - chr6_3:11864000-11864019 None:intergenic 30.0%
!!! GGTTTTGTTGTGTCAAGATA+GGG - chr6_3:11862693-11862712 None:intergenic 35.0%
!!! AGGTTTTGTTGTGTCAAGAT+AGG - chr6_3:11862694-11862713 None:intergenic 35.0%
!! AGTGAAGTTGGTGATGAAAA+AGG - chr6_3:11862714-11862733 None:intergenic 35.0%
TAGAAGAAGAGAAGTTCAAC+TGG - chr6_3:11862777-11862796 None:intergenic 35.0%
CAAATTATGTTACCAGCAAG+AGG - chr6_3:11862888-11862907 None:intergenic 35.0%
CTCTTGCTGGTAACATAATT+TGG + chr6_3:11862886-11862905 Msa0939750:intron 35.0%
!! ATTGGTTTGGATGAATCTCT+AGG - chr6_3:11862912-11862931 None:intergenic 35.0%
CCCTTGACATAGTTTATGAT+TGG - chr6_3:11862930-11862949 None:intergenic 35.0%
!! GTTGCTTTGTTTCCAAACAA+TGG + chr6_3:11863092-11863111 Msa0939750:CDS 35.0%
CCAATGCAAAAACCATTGTT+TGG - chr6_3:11863107-11863126 None:intergenic 35.0%
! CCAAACAATGGTTTTTGCAT+TGG + chr6_3:11863104-11863123 Msa0939750:CDS 35.0%
!! ATTTTCCATCTAAAGCAGCA+TGG - chr6_3:11863142-11863161 None:intergenic 35.0%
!! GTTGATTTGTTGAAACATGG+TGG + chr6_3:11863320-11863339 Msa0939750:CDS 35.0%
ACAACCTAAGGTTGAAAAAG+TGG + chr6_3:11863544-11863563 Msa0939750:CDS 35.0%
! TGTGTTTGAGACAAAGAACT+TGG + chr6_3:11863655-11863674 Msa0939750:CDS 35.0%
! TTTGAGACAAAGAACTTGGT+TGG + chr6_3:11863659-11863678 Msa0939750:CDS 35.0%
!!! AAAACAGGAGCATTTTCTCT+TGG + chr6_3:11863899-11863918 Msa0939750:CDS 35.0%
! CATTTTCTCTTGGTGAAAGT+AGG + chr6_3:11863909-11863928 Msa0939750:CDS 35.0%
GGTGAAAGTAGGAATAACAA+TGG + chr6_3:11863920-11863939 Msa0939750:CDS 35.0%
GAAAGTAGGAATAACAATGG+TGG + chr6_3:11863923-11863942 Msa0939750:CDS 35.0%
! AACAATGGTGGAATTGAGAT+TGG + chr6_3:11863935-11863954 Msa0939750:CDS 35.0%
!! GATTGGTTTGGCTTTAAGTA+AGG + chr6_3:11863952-11863971 Msa0939750:CDS 35.0%
CTGCATCGTTCTAACTTTAT+CGG + chr6_3:11864101-11864120 Msa0939750:intron 35.0%
!! ATATGAAGAGTATCCCTTCA+AGG - chr6_3:11864131-11864150 None:intergenic 35.0%
TGTCATGATGTATTCCTGTT+TGG + chr6_3:11864254-11864273 Msa0939750:intron 35.0%
GTCATGATGTATTCCTGTTT+GGG + chr6_3:11864255-11864274 Msa0939750:intron 35.0%
TGTCATGATGTATTCCTGTT+TGG + chr6_3:11864254-11864273 Msa0939750:intron 35.0%
GTCATGATGTATTCCTGTTT+GGG + chr6_3:11864255-11864274 Msa0939750:intron 35.0%
ACTGGACAAAATAGGAAACA+AGG + chr6_3:11864762-11864781 Msa0939750:intron 35.0%
CTGGACAAAATAGGAAACAA+GGG + chr6_3:11864763-11864782 Msa0939750:intron 35.0%
TTGTCTTATACGATGTTTGG+TGG - chr6_3:11864885-11864904 None:intergenic 35.0%
! CAACCCAAGACAACATTTTA+TGG - chr6_3:11864923-11864942 None:intergenic 35.0%
TGAAGAGCTTATGAGTGAAA+TGG + chr6_3:11865107-11865126 Msa0939750:intron 35.0%
GAATTGTGTGTTTGGATTGA+GGG - chr6_3:11865322-11865341 None:intergenic 35.0%
TGAATTGTGTGTTTGGATTG+AGG - chr6_3:11865323-11865342 None:intergenic 35.0%
TGGCAAATGAATTGTGTGTT+TGG - chr6_3:11865330-11865349 None:intergenic 35.0%
! CATTAGGAGTGTACAAATGA+CGG - chr6_3:11866000-11866019 None:intergenic 35.0%
ATTTGTACACTCCTAATGAG+AGG + chr6_3:11866002-11866021 Msa0939750:intron 35.0%
TTTGTACACTCCTAATGAGA+GGG + chr6_3:11866003-11866022 Msa0939750:intron 35.0%
! TGATGGTGTGACATAAAGAA+AGG + chr6_3:11866038-11866057 Msa0939750:intron 35.0%
GATGGTGTGACATAAAGAAA+GGG + chr6_3:11866039-11866058 Msa0939750:intron 35.0%
! GGCTAGAAGAAATGAGTTTT+AGG + chr6_3:11866170-11866189 Msa0939750:intron 35.0%
GCCGAGAGTTAAGTAAAATT+TGG - chr6_3:11866790-11866809 None:intergenic 35.0%
GTAAATGGGTGATTGTGATT+CGG - chr6_3:11866819-11866838 None:intergenic 35.0%
CTATGATTTCCAGGGTAAAT+GGG - chr6_3:11866833-11866852 None:intergenic 35.0%
CATTTACCCTGGAAATCATA+GGG + chr6_3:11866832-11866851 Msa0939750:intron 35.0%
GTATTAACCCTATGATTTCC+AGG - chr6_3:11866842-11866861 None:intergenic 35.0%
GGAATGAACCACAATGATAT+AGG - chr6_3:11867042-11867061 None:intergenic 35.0%
GGTGATTGCTTTCATACTAA+AGG + chr6_3:11867434-11867453 Msa0939750:intron 35.0%
TCATACTAAAGGAGTAGCTA+CGG + chr6_3:11867445-11867464 Msa0939750:intron 35.0%
AATCTAGCTACTAAGCTACT+TGG - chr6_3:11867531-11867550 None:intergenic 35.0%
TACATTATGTGTGGAGAAGT+AGG + chr6_3:11867555-11867574 Msa0939750:intron 35.0%
TACAAACTGAGCTACACTTA+CGG + chr6_3:11867626-11867645 Msa0939750:intron 35.0%
TGATTCCATCTTATAGGAAC+CGG + chr6_3:11867728-11867747 Msa0939750:intron 35.0%
GAGGGACTAAAATGAAAAGT+TGG - chr6_3:11868045-11868064 None:intergenic 35.0%
TTCTTCACCATTATCGATAG+CGG - chr6_3:11868572-11868591 None:intergenic 35.0%
GGTGAAGAATGAAAATGTGA+AGG + chr6_3:11868583-11868602 Msa0939750:intron 35.0%
AAGGAATGTAAGGTAAAGTC+AGG + chr6_3:11868602-11868621 Msa0939750:intron 35.0%
!! TGAATTGAGGTTTTGTCACA+TGG + chr6_3:11868632-11868651 Msa0939750:intron 35.0%
!! GAATTGAGGTTTTGTCACAT+GGG + chr6_3:11868633-11868652 Msa0939750:intron 35.0%
! ACACGTACACCTTTTCTTTT+TGG - chr6_3:11868721-11868740 None:intergenic 35.0%
GAGACATATGTATGTGCAAA+TGG + chr6_3:11869039-11869058 Msa0939750:intron 35.0%
!! AAGCGGTTTTAACATCCATT+TGG + chr6_3:11869262-11869281 Msa0939750:intron 35.0%
! TATTTGGTAGACTTGCCTTT+TGG - chr6_3:11869339-11869358 None:intergenic 35.0%
GTCTAACAAGACCTAGTATT+TGG - chr6_3:11869355-11869374 None:intergenic 35.0%
CATCATTTGATTCTATGACC+AGG + chr6_3:11869613-11869632 Msa0939750:intron 35.0%
!! AGCATATAGGTTTTATGACC+TGG - chr6_3:11869634-11869653 None:intergenic 35.0%
! CTAGTGAGTTTTACTCTCTT+AGG + chr6_3:11869699-11869718 Msa0939750:intron 35.0%
! AGTTTTACTCTCTTAGGATC+TGG + chr6_3:11869705-11869724 Msa0939750:intron 35.0%
AAGATAGGTTAGACAATCTC+TGG + chr6_3:11869734-11869753 Msa0939750:intron 35.0%
AATCTCTGGTCAACAACAAA+AGG + chr6_3:11869748-11869767 Msa0939750:intron 35.0%
!! TTTTGGTGTGATTAGAAGTG+AGG + chr6_3:11869862-11869881 Msa0939750:intron 35.0%
GATCAAATGATCTTAGCTGT+TGG - chr6_3:11869932-11869951 None:intergenic 35.0%
TTGGAACATGTGGAATGTTA+TGG - chr6_3:11870030-11870049 None:intergenic 35.0%
ACAAACCTCAATTCCATTCT+TGG - chr6_3:11870076-11870095 None:intergenic 35.0%
!! TTTTTGGTGACATAGAAGAC+AGG - chr6_3:11868705-11868724 None:intergenic 35.0%
ATGTCACCAAAAAGAAAAGG+TGG + chr6_3:11868712-11868731 Msa0939750:intron 35.0%
!! TATGAAGTAGTGTCGTTTGT+TGG + chr6_3:11870248-11870267 Msa0939750:intron 35.0%
GAATATCCGTCTACATGTAT+AGG - chr6_3:11870291-11870310 None:intergenic 35.0%
! CTGGTAAAACTCTTTTGAAC+AGG + chr6_3:11870646-11870665 Msa0939750:intron 35.0%
ACCGACCAAAATAAAACTGA+GGG + chr6_3:11870765-11870784 Msa0939750:intron 35.0%
!!! GTAACCCCTCAGTTTTATTT+TGG - chr6_3:11870773-11870792 None:intergenic 35.0%
ACAACCTAAGGTTCAAAAAG+TGG + chr6_3:11870965-11870984 Msa0939750:CDS 35.0%
!! GCCGGTTTTCATAATTTCTA+TGG + chr6_3:11870987-11871006 Msa0939750:CDS 35.0%
! TGTGTTTGAGACAAAGAACT+TGG + chr6_3:11863655-11863674 Msa0939750:CDS 35.0%
! TTTGAGACAAAGAACTTGGT+TGG + chr6_3:11863659-11863678 Msa0939750:CDS 35.0%
!!! AAAACAGGAGCATTTTCTCT+TGG + chr6_3:11863899-11863918 Msa0939750:CDS 35.0%
! CATTTTCTCTTGGTGAAAGT+AGG + chr6_3:11863909-11863928 Msa0939750:CDS 35.0%
GGTGAAAGTAGGAATAACAA+TGG + chr6_3:11863920-11863939 Msa0939750:CDS 35.0%
GAAAGTAGGAATAACAATGG+TGG + chr6_3:11863923-11863942 Msa0939750:CDS 35.0%
! AACAATGGTGGAATTGAGAT+TGG + chr6_3:11863935-11863954 Msa0939750:CDS 35.0%
!! GATTGGTTTGGCTTTAAGTA+AGG + chr6_3:11863952-11863971 Msa0939750:CDS 35.0%
AAAGTGAGTGGAAGTGAAGT+TGG - chr6_3:11862726-11862745 None:intergenic 40.0%
AAGAAGAGAAGTTCAACTGG+TGG - chr6_3:11862774-11862793 None:intergenic 40.0%
AGCAAAAGCAGAACAACCTA+AGG + chr6_3:11863532-11863551 Msa0939750:intron 40.0%
! TGGTGGAATTGAGATTGGTT+TGG + chr6_3:11863940-11863959 Msa0939750:CDS 40.0%
!! GGCTTTAAGTAAGGAAGACA+TGG + chr6_3:11863961-11863980 Msa0939750:CDS 40.0%
ACTTTATCGGATGTCCTTGA+AGG + chr6_3:11864114-11864133 Msa0939750:intron 40.0%
CTTTATCGGATGTCCTTGAA+GGG + chr6_3:11864115-11864134 Msa0939750:intron 40.0%
! ATTCCTGTTTGGGATGTACT+TGG + chr6_3:11864265-11864284 Msa0939750:intron 40.0%
AATCCAAGTACATCCCAAAC+AGG - chr6_3:11864271-11864290 None:intergenic 40.0%
! ATTCCTGTTTGGGATGTACT+TGG + chr6_3:11864265-11864284 Msa0939750:intron 40.0%
TACAAAACTATTCTCGGGAC+TGG + chr6_3:11864744-11864763 Msa0939750:intron 40.0%
TATCGTGATTTAGAGAGGGA+GGG - chr6_3:11864810-11864829 None:intergenic 40.0%
TGTATGATTCTCGCCATAGA+TGG + chr6_3:11865009-11865028 Msa0939750:intron 40.0%
TATATATCATGAGAGCGGGA+GGG - chr6_3:11865068-11865087 None:intergenic 40.0%
TGTGTTTGGATTGAGGGTTT+AGG - chr6_3:11865316-11865335 None:intergenic 40.0%
GTCAACTAGTTAAACTCACG+AGG - chr6_3:11865757-11865776 None:intergenic 40.0%
!! TTTTAAGGAAGGTGCACAGA+CGG - chr6_3:11865943-11865962 None:intergenic 40.0%
TGTGACATAAAGAAAGGGCA+AGG + chr6_3:11866044-11866063 Msa0939750:intron 40.0%
!!! AGGGTTTTTAAGTGTGGCTT+TGG + chr6_3:11866190-11866209 Msa0939750:intron 40.0%
AAAGAAGTAACCACATGGTC+CGG - chr6_3:11866270-11866289 None:intergenic 40.0%
TTGCCAAAGAAGTAACCACA+TGG - chr6_3:11866275-11866294 None:intergenic 40.0%
ATGTGGTTACTTCTTTGGCA+AGG + chr6_3:11866274-11866293 Msa0939750:intron 40.0%
TGAAGTATAAGGTGTAGGGA+CGG + chr6_3:11866397-11866416 Msa0939750:intron 40.0%
CCTATGATTTCCAGGGTAAA+TGG - chr6_3:11866834-11866853 None:intergenic 40.0%
CCATTTACCCTGGAAATCAT+AGG + chr6_3:11866831-11866850 Msa0939750:intron 40.0%
TGTGGAGAAGTAGGAAATCT+GGG + chr6_3:11867564-11867583 Msa0939750:intron 40.0%
! TACCAGGGATAATTTGTGCA+GGG - chr6_3:11867604-11867623 None:intergenic 40.0%
ACAAACTGAGCTACACTTAC+GGG + chr6_3:11867627-11867646 Msa0939750:intron 40.0%
ATTCTCCGGTTCCTATAAGA+TGG - chr6_3:11867736-11867755 None:intergenic 40.0%
! AGACATTAGTTTCTTGCCCA+TGG + chr6_3:11869182-11869201 Msa0939750:intron 40.0%
GGTACCAATTTGCAACCAAA+AGG + chr6_3:11869321-11869340 Msa0939750:intron 40.0%
!! CTTGCCTTTTGGTTGCAAAT+TGG - chr6_3:11869328-11869347 None:intergenic 40.0%
AGGCAAGTCTACCAAATACT+AGG + chr6_3:11869341-11869360 Msa0939750:intron 40.0%
AGATGTAACAGAACTCGAAG+AGG - chr6_3:11869477-11869496 None:intergenic 40.0%
AAAATAGTGGTGGCACTAGT+GGG - chr6_3:11869556-11869575 None:intergenic 40.0%
CCTATGCATGTGCATTCATT+GGG - chr6_3:11869674-11869693 None:intergenic 40.0%
! AGGATCTGGAATTCGAAGAT+AGG + chr6_3:11869719-11869738 Msa0939750:intron 40.0%
CTTGGCAATGTATCCTACAA+AGG - chr6_3:11870058-11870077 None:intergenic 40.0%
GTAGGATACATTGCCAAGAA+TGG + chr6_3:11870060-11870079 Msa0939750:intron 40.0%
CATTGCCAAGAATGGAATTG+AGG + chr6_3:11870068-11870087 Msa0939750:intron 40.0%
TGGAATTGAGGTTTGTCACA+TGG + chr6_3:11870080-11870099 Msa0939750:intron 40.0%
GGAATTGAGGTTTGTCACAT+GGG + chr6_3:11870081-11870100 Msa0939750:intron 40.0%
! ACACGTCCACCTTTTCTTTT+TGG - chr6_3:11870169-11870188 None:intergenic 40.0%
CACCGACCAAAATAAAACTG+AGG + chr6_3:11870764-11870783 Msa0939750:intron 40.0%
!!! CCCCTCAGTTTTATTTTGGT+CGG - chr6_3:11870769-11870788 None:intergenic 40.0%
CCGACCAAAATAAAACTGAG+GGG + chr6_3:11870766-11870785 Msa0939750:intron 40.0%
AGCAAAAGCAGAACAACCTA+AGG + chr6_3:11863532-11863551 Msa0939750:intron 40.0%
! TGGTGGAATTGAGATTGGTT+TGG + chr6_3:11863940-11863959 Msa0939750:CDS 40.0%
!! GGCTTTAAGTAAGGAAGACA+TGG + chr6_3:11863961-11863980 Msa0939750:CDS 40.0%
!! ACACACCATGCTGCTTTAGA+TGG + chr6_3:11863134-11863153 Msa0939750:CDS 45.0%
ACTCTATTGCTGGATCTCCA+AGG + chr6_3:11863810-11863829 Msa0939750:CDS 45.0%
GATCCAAGTACATCCCAAAC+AGG - chr6_3:11864307-11864326 None:intergenic 45.0%
TTCTCGGGACTGGACAAAAT+AGG + chr6_3:11864754-11864773 Msa0939750:intron 45.0%
ATCGTGATTTAGAGAGGGAG+GGG - chr6_3:11864809-11864828 None:intergenic 45.0%
GTATCGTGATTTAGAGAGGG+AGG - chr6_3:11864811-11864830 None:intergenic 45.0%
CCATAGATGGATCTAGAGGT+GGG + chr6_3:11865022-11865041 Msa0939750:intron 45.0%
GTATATATCATGAGAGCGGG+AGG - chr6_3:11865069-11865088 None:intergenic 45.0%
TTGCACTCAACCCTCTCATT+AGG - chr6_3:11866016-11866035 None:intergenic 45.0%
GACATAAAGAAAGGGCAAGG+TGG + chr6_3:11866047-11866066 Msa0939750:intron 45.0%
! TGGCTCAGGTTTAGGTTTGA+GGG + chr6_3:11866067-11866086 Msa0939750:intron 45.0%
! AGGTTTAGGTTTGAGGGAAG+AGG + chr6_3:11866073-11866092 Msa0939750:intron 45.0%
CGTGAAAAAGGACAGAGAGA+TGG + chr6_3:11866134-11866153 Msa0939750:intron 45.0%
GTAACAATAACCGGACCATG+TGG + chr6_3:11866257-11866276 Msa0939750:intron 45.0%
GGACCATGTGGTTACTTCTT+TGG + chr6_3:11866269-11866288 Msa0939750:intron 45.0%
TCACAATCACCCATTTACCC+TGG + chr6_3:11866821-11866840 Msa0939750:intron 45.0%
TTGAAAATGTAGGGGGACCA+TGG + chr6_3:11867214-11867233 Msa0939750:intron 45.0%
TGAAAATGTAGGGGGACCAT+GGG + chr6_3:11867215-11867234 Msa0939750:intron 45.0%
!! TCTCTGAGGCATACCTTAAG+TGG - chr6_3:11867278-11867297 None:intergenic 45.0%
!! AAAGGAGTAGTGGATGAGCA+AGG + chr6_3:11867412-11867431 Msa0939750:intron 45.0%
!! AAGGAGTAGTGGATGAGCAA+GGG + chr6_3:11867413-11867432 Msa0939750:intron 45.0%
GTGTGGAGAAGTAGGAAATC+TGG + chr6_3:11867563-11867582 Msa0939750:intron 45.0%
GTGGAGAAGTAGGAAATCTG+GGG + chr6_3:11867565-11867584 Msa0939750:intron 45.0%
! CTACCAGGGATAATTTGTGC+AGG - chr6_3:11867605-11867624 None:intergenic 45.0%
AGCTCAGTTTGTAGCTACCA+GGG - chr6_3:11867619-11867638 None:intergenic 45.0%
TAGCTCAGTTTGTAGCTACC+AGG - chr6_3:11867620-11867639 None:intergenic 45.0%
GTCAGGAGAGAGTTGAATTG+AGG + chr6_3:11868619-11868638 Msa0939750:intron 45.0%
ATGGCTTCTTGAAGGCTAGT+TGG + chr6_3:11869399-11869418 Msa0939750:intron 45.0%
CTGATCACAATCCAGTGATC+CGG - chr6_3:11869523-11869542 None:intergenic 45.0%
AAATAGTGGTGGCACTAGTG+GGG - chr6_3:11869555-11869574 None:intergenic 45.0%
GAAAATAGTGGTGGCACTAG+TGG - chr6_3:11869557-11869576 None:intergenic 45.0%
CCCAATGAATGCACATGCAT+AGG + chr6_3:11869671-11869690 Msa0939750:intron 45.0%
GCCTATGCATGTGCATTCAT+TGG - chr6_3:11869675-11869694 None:intergenic 45.0%
! AAAGGCAGTGTTGGAACATG+TGG - chr6_3:11870040-11870059 None:intergenic 45.0%
TGTTCCAACACTGCCTTTGT+AGG + chr6_3:11870042-11870061 Msa0939750:intron 45.0%
GTATCCTACAAAGGCAGTGT+TGG - chr6_3:11870049-11870068 None:intergenic 45.0%
!! CCAAAGGTTTTGCCGTTTAG+TGG - chr6_3:11870736-11870755 None:intergenic 45.0%
CCACTAAACGGCAAAACCTT+TGG + chr6_3:11870733-11870752 Msa0939750:intron 45.0%
CGGCAAAACCTTTGGTGAAA+TGG + chr6_3:11870741-11870760 Msa0939750:intron 45.0%
CCTAAGGTTCAAAAAGTGGC+CGG + chr6_3:11870969-11870988 Msa0939750:CDS 45.0%
ACTCTATTGCTGGATCTCCA+AGG + chr6_3:11863810-11863829 Msa0939750:CDS 45.0%
!!! ACAAAATTTTTAAAAAAAAT+AGG - chr6_3:11864392-11864411 None:intergenic 5.0%
!!! TCAATTTTTTAATTTTTTTA+TGG - chr6_3:11865170-11865189 None:intergenic 5.0%
!!! ATATTTTATAATTACATAAA+TGG - chr6_3:11866330-11866349 None:intergenic 5.0%
!! AATAAAAAAATACAAAAAAT+AGG + chr6_3:11866639-11866658 Msa0939750:intron 5.0%
CAACACTTTCTCCCTCTTGC+TGG + chr6_3:11862873-11862892 Msa0939750:CDS 50.0%
AACCCAACAAACCTGCGTAC+GGG - chr6_3:11864174-11864193 None:intergenic 50.0%
CAACCCAACAAACCTGCGTA+CGG - chr6_3:11864175-11864194 None:intergenic 50.0%
CTCGCCATAGATGGATCTAG+AGG + chr6_3:11865018-11865037 Msa0939750:intron 50.0%
GCCATAGATGGATCTAGAGG+TGG + chr6_3:11865021-11865040 Msa0939750:intron 50.0%
CCCACCTCTAGATCCATCTA+TGG - chr6_3:11865025-11865044 None:intergenic 50.0%
ACCTGTCTTTCCCTCACTTC+AGG + chr6_3:11865289-11865308 Msa0939750:intron 50.0%
ACCTGAAGTGAGGGAAAGAC+AGG - chr6_3:11865293-11865312 None:intergenic 50.0%
! GGGTTTAGGACCTGAAGTGA+GGG - chr6_3:11865302-11865321 None:intergenic 50.0%
! AGGGTTTAGGACCTGAAGTG+AGG - chr6_3:11865303-11865322 None:intergenic 50.0%
GAGGGTTGAGTGCAAGATGA+TGG + chr6_3:11866021-11866040 Msa0939750:intron 50.0%
! GTGGCTCAGGTTTAGGTTTG+AGG + chr6_3:11866066-11866085 Msa0939750:intron 50.0%
AGGCATACCTTAAGTGGCAG+GGG - chr6_3:11867272-11867291 None:intergenic 50.0%
GAGGCATACCTTAAGTGGCA+GGG - chr6_3:11867273-11867292 None:intergenic 50.0%
TGAGGCATACCTTAAGTGGC+AGG - chr6_3:11867274-11867293 None:intergenic 50.0%
! GATAATTTGTGCAGGGACCG+GGG - chr6_3:11867597-11867616 None:intergenic 50.0%
! GGATAATTTGTGCAGGGACC+GGG - chr6_3:11867598-11867617 None:intergenic 50.0%
! GGGATAATTTGTGCAGGGAC+CGG - chr6_3:11867599-11867618 None:intergenic 50.0%
GTCCCTGCACAAATTATCCC+TGG + chr6_3:11867599-11867618 Msa0939750:intron 50.0%
! TATCGATAGCGGCGAAGCTA+AGG - chr6_3:11868561-11868580 None:intergenic 50.0%
AGCTTCGCCGCTATCGATAA+TGG + chr6_3:11868562-11868581 Msa0939750:intron 50.0%
CGATGTTCTCATCACTGCTC+CGG + chr6_3:11869501-11869520 Msa0939750:intron 50.0%
AATAGTGGTGGCACTAGTGG+GGG - chr6_3:11869554-11869573 None:intergenic 50.0%
!!! CCGGCCACTTTTTGAACCTT+AGG - chr6_3:11870972-11870991 None:intergenic 50.0%
GATCTAGAGGTGGGAACCCT+AGG + chr6_3:11865031-11865050 Msa0939750:intron 55.0%
TATCATGAGAGCGGGAGGGA+GGG - chr6_3:11865064-11865083 None:intergenic 55.0%
ATATCATGAGAGCGGGAGGG+AGG - chr6_3:11865065-11865084 None:intergenic 55.0%
AAGAAAGGGCAAGGTGGCTC+AGG + chr6_3:11866053-11866072 Msa0939750:intron 55.0%
!! AGAGATGGACTGCGAGGCTA+GGG + chr6_3:11866149-11866168 Msa0939750:intron 55.0%
ATACCTTAAGTGGCAGGGGG+GGG - chr6_3:11867268-11867287 None:intergenic 55.0%
CATACCTTAAGTGGCAGGGG+GGG - chr6_3:11867269-11867288 None:intergenic 55.0%
GCATACCTTAAGTGGCAGGG+GGG - chr6_3:11867270-11867289 None:intergenic 55.0%
GGCATACCTTAAGTGGCAGG+GGG - chr6_3:11867271-11867290 None:intergenic 55.0%
! GAAATCTGGGGTTCGAACCC+CGG + chr6_3:11867577-11867596 Msa0939750:intron 55.0%
TCATCACTGCTCCGGATCAC+TGG + chr6_3:11869509-11869528 Msa0939750:intron 55.0%
!! GGTCGGTGCCATTTCACCAA+AGG - chr6_3:11870752-11870771 None:intergenic 55.0%
! CGCCCGTACGCAGGTTTGTT+GGG + chr6_3:11864169-11864188 Msa0939750:intron 60.0%
TAGAGGTGGGAACCCTAGGC+TGG + chr6_3:11865035-11865054 Msa0939750:intron 60.0%
ATCATGAGAGCGGGAGGGAG+GGG - chr6_3:11865063-11865082 None:intergenic 60.0%
GGGCAAGGTGGCTCAGGTTT+AGG + chr6_3:11866059-11866078 Msa0939750:intron 60.0%
!! GGACAGAGAGATGGACTGCG+AGG + chr6_3:11866143-11866162 Msa0939750:intron 60.0%
!! GAGAGATGGACTGCGAGGCT+AGG + chr6_3:11866148-11866167 Msa0939750:intron 60.0%
TACCTTAAGTGGCAGGGGGG+GGG - chr6_3:11867267-11867286 None:intergenic 60.0%
! CGATAGCGGCGAAGCTAAGG+TGG - chr6_3:11868558-11868577 None:intergenic 60.0%
ATGGTTTCGCGCCCGTACGC+AGG + chr6_3:11864160-11864179 Msa0939750:intron 65.0%
GCGCCCGTACGCAGGTTTGT+TGG + chr6_3:11864168-11864187 Msa0939750:intron 65.0%
AGGGGGACCATGGGCTCCAA+AGG + chr6_3:11867224-11867243 Msa0939750:intron 65.0%
ACCTTAAGTGGCAGGGGGGG+GGG - chr6_3:11867266-11867285 None:intergenic 65.0%
GAGGGAGGGGCTCCAGCCTA+GGG - chr6_3:11865050-11865069 None:intergenic 70.0%
TTAAGTGGCAGGGGGGGGGG+GGG - chr6_3:11867263-11867282 None:intergenic 70.0%
CTTAAGTGGCAGGGGGGGGG+GGG - chr6_3:11867264-11867283 None:intergenic 70.0%
CCTTAAGTGGCAGGGGGGGG+GGG - chr6_3:11867265-11867284 None:intergenic 70.0%
GGAGGGAGGGGCTCCAGCCT+AGG - chr6_3:11865051-11865070 None:intergenic 75.0%
!! GGGGGGGCCTTTGGAGCCCA+TGG - chr6_3:11867234-11867253 None:intergenic 75.0%
TAAGTGGCAGGGGGGGGGGG+GGG - chr6_3:11867262-11867281 None:intergenic 75.0%
! CCCCCCCCCCCTGCCACTTA+AGG + chr6_3:11867262-11867281 Msa0939750:intron 75.0%
! AAGTGGCAGGGGGGGGGGGG+GGG - chr6_3:11867261-11867280 None:intergenic 80.0%
! AGTGGCAGGGGGGGGGGGGG+GGG - chr6_3:11867260-11867279 None:intergenic 85.0%
! GGGGGGGGGGGGGGGGCCTT+TGG - chr6_3:11867243-11867262 None:intergenic 90.0%
! TGGCAGGGGGGGGGGGGGGG+GGG - chr6_3:11867258-11867277 None:intergenic 90.0%
! GTGGCAGGGGGGGGGGGGGG+GGG - chr6_3:11867259-11867278 None:intergenic 90.0%
! AGGGGGGGGGGGGGGGGGGG+GGG - chr6_3:11867254-11867273 None:intergenic 95.0%
! CAGGGGGGGGGGGGGGGGGG+GGG - chr6_3:11867255-11867274 None:intergenic 95.0%
! GCAGGGGGGGGGGGGGGGGG+GGG - chr6_3:11867256-11867275 None:intergenic 95.0%
! GGCAGGGGGGGGGGGGGGGG+GGG - chr6_3:11867257-11867276 None:intergenic 95.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 11862651 11871449 11862651 ID=Msa0939750;Name=Msa0939750
chr6_3 mRNA 11862651 11871449 11862651 ID=Msa0939750-mRNA-1;Parent=Msa0939750;Name=Msa0939750-mRNA-1;_AED=0.09;_eAED=0.11;_QI=0|0|0|1|0|0|6|0|544
chr6_3 exon 11862651 11862894 11862651 ID=Msa0939750-mRNA-1:exon:3899;Parent=Msa0939750-mRNA-1
chr6_3 exon 11862952 11863167 11862952 ID=Msa0939750-mRNA-1:exon:3900;Parent=Msa0939750-mRNA-1
chr6_3 exon 11863282 11863509 11863282 ID=Msa0939750-mRNA-1:exon:3901;Parent=Msa0939750-mRNA-1
chr6_3 exon 11863543 11863788 11863543 ID=Msa0939750-mRNA-1:exon:3902;Parent=Msa0939750-mRNA-1
chr6_3 exon 11863801 11864003 11863801 ID=Msa0939750-mRNA-1:exon:3903;Parent=Msa0939750-mRNA-1
chr6_3 exon 11870955 11871449 11870955 ID=Msa0939750-mRNA-1:exon:3904;Parent=Msa0939750-mRNA-1
chr6_3 CDS 11862651 11862894 11862651 ID=Msa0939750-mRNA-1:cds;Parent=Msa0939750-mRNA-1
chr6_3 CDS 11862952 11863167 11862952 ID=Msa0939750-mRNA-1:cds;Parent=Msa0939750-mRNA-1
chr6_3 CDS 11863282 11863509 11863282 ID=Msa0939750-mRNA-1:cds;Parent=Msa0939750-mRNA-1
chr6_3 CDS 11863543 11863788 11863543 ID=Msa0939750-mRNA-1:cds;Parent=Msa0939750-mRNA-1
chr6_3 CDS 11863801 11864003 11863801 ID=Msa0939750-mRNA-1:cds;Parent=Msa0939750-mRNA-1
chr6_3 CDS 11870955 11871449 11870955 ID=Msa0939750-mRNA-1:cds;Parent=Msa0939750-mRNA-1
Gene Sequence

>Msa0939750

GAAGAATCATTCAAAGTTGTTCAAGTTTGCAATGTTGAACCCTATCTTGACACAACAAAACCTTTTTCATCACCAACTTCACTTCCACTCACTTTCTTTGATCTTTTATGGTTAAGATTTCCACCAGTTGAACTTCTCTTCTTCTATGAACTCACAAACTCAACAACTTTTTTCTATGACACTCTTCTTCCAAATCTTAAACATTCACTTTCACTCACACTTCAACACTTTCTCCCTCTTGCTGATTCTATTTCTTTCAATGTTGTTGAGTCCAAAGAAAGTTTCAAAGATCTTTCTTCTCATCATTGTGAAGCTTCAAAAAGACATCATTTGATACCACATTTGAAAATTTATCATGAAAAGGCTTCTTTGCTTGCAATACAAGTTGCTTTGTTTCCAAACAATGGTTTTTGCATTGGAATAACAACACACCATGCTGCTTTAGATGGAAAATCTTTAAACCATAATAATGGAATTGGAATTAGTGAAGCATATGTTGTTGATTTGTTGAAACATGGTGGACCAGATAATAAAAGCCTCAAGATTATGAATTTTTCTGGTCCAATGAAACATGATGTAGTTAAAAGTTTGTATGAATTGACACTTTCAAATATTCAAAAGCTTAAAGAACATGGAAAAAATAATATGAAAATGAAGGTTATAAATTTGTCAACTTTTTTAGTTACAAAACAACCTAAGGTTGAAAAAGTGGTTTTCATAATTTCTATGGATTGTAGATCAAGATTGGACCCTTCAATTTCTACTATGTATATTGGGAATTGTATTGCAGGACAAAAGATTGTGTTTGAGACAAAGAACTTGGTTGGAAAAAATGGATTTGTAAATGCTTTAGAAGGGATAAATAAAGCTTTGAATAGTGTGAAAGATGTTGGAGTGTTAAATGGAGCTGAATATTGGGTTTCTAATATGTATAGTAAAATTTACTCTATTGCTGGATCTCCAAGGTTTGAGTTTTATAGTACTGATTTTGGATTTGGAAAGCCAAAAAAAGTTGATATGACTTCAACTGATAAAACAGGAGCATTTTCTCTTGGTGAAAGTAGGAATAACAATGGTGGAATTGAGATTGGTTTGGCTTTAAGTAAGGAAGACATGGAAGCTTTTTCTACCCTTTTTCAAAAGCAGAACAACCTAAGGTTCAAAAAGTGGCCGGTTTTCATAATTTCTATGGATTGTAGATCAAGATTGGACCGTTCAATTTCTACTATGTATATTGGAAATTGTATTGCAGGACAAAAGATTGTGTTTGAGACAAAGAACTTGGTTGGAAAAAATGGATTTGTAAATGCTTTAGAAGGGATAAATAAAGCTTTGAATAGTGTGAAAGATGTTGGAGTGTTAAATGGAGCTGAAAATTGGGTTTCTAATATGTATAGTGGAATTGAAGGTAAAATTTACTCTATTGCTGGATCTCCAAGGTTTGAGTTTTATAGTACTGATTTTGGATTTGGAAAGCCAAAAAAAGTTGATATGACTTCAACTGATAAAACAGGAGCATTTTCTCTTGGTGAAAGTAGGAATAACAATGGTGGAATTGAGATTGGTTTGGCTTTAAGTAAGGAAGACATGGAAGCTTTTTCTACCCTTTTTGTTCAAGGACTTGAATCCATT
Protein sequence

>Msa0939750

EESFKVVQVCNVEPYLDTTKPFSSPTSLPLTFFDLLWLRFPPVELLFFYELTNSTTFFYDTLLPNLKHSLSLTLQHFLPLADSISFNVVESKESFKDLSSHHCEASKRHHLIPHLKIYHEKASLLAIQVALFPNNGFCIGITTHHAALDGKSLNHNNGIGISEAYVVDLLKHGGPDNKSLKIMNFSGPMKHDVVKSLYELTLSNIQKLKEHGKNNMKMKVINLSTFLVTKQPKVEKVVFIISMDCRSRLDPSISTMYIGNCIAGQKIVFETKNLVGKNGFVNALEGINKALNSVKDVGVLNGAEYWVSNMYSKIYSIAGSPRFEFYSTDFGFGKPKKVDMTSTDKTGAFSLGESRNNNGGIEIGLALSKEDMEAFSTLFQKQNNLRFKKWPVFIISMDCRSRLDRSISTMYIGNCIAGQKIVFETKNLVGKNGFVNALEGINKALNSVKDVGVLNGAENWVSNMYSGIEGKIYSIAGSPRFEFYSTDFGFGKPKKVDMTSTDKTGAFSLGESRNNNGGIEIGLALSKEDMEAFSTLFVQGLESI