Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0976310 | KEH25128.1 | 63.971 | 408 | 33 | 5 | 351 | 644 | 48 | 455 | 1.43e-160 | 479 |
Msa0976310 | KEH25128.1 | 72.848 | 453 | 33 | 6 | 1 | 369 | 14 | 460 | 0.0 | 624 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0976310 | sp|Q9LRQ8|PMAT2_ARATH | 30.508 | 413 | 209 | 11 | 19 | 353 | 27 | 439 | 4.17e-49 | 181 |
Msa0976310 | sp|Q9LRQ8|PMAT2_ARATH | 31.421 | 401 | 155 | 10 | 354 | 640 | 46 | 440 | 2.36e-46 | 173 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0976310 | A0A072U7M4 | 63.971 | 408 | 33 | 5 | 351 | 644 | 48 | 455 | 6.84e-161 | 479 |
Msa0976310 | A0A072U7M4 | 72.848 | 453 | 33 | 6 | 1 | 369 | 14 | 460 | 0.0 | 624 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0004360 | Msa0976310 | 0.806615 | 7.546342e-50 | -8.615850e-47 |
Msa0008410 | Msa0976310 | 0.809207 | 2.120863e-50 | -8.615850e-47 |
Msa0044020 | Msa0976310 | 0.805941 | 1.046915e-49 | -8.615850e-47 |
Msa0047980 | Msa0976310 | 0.842310 | 2.796748e-58 | -8.615850e-47 |
Msa0051170 | Msa0976310 | 0.817855 | 2.655905e-52 | -8.615850e-47 |
Msa0051270 | Msa0976310 | 0.817819 | 2.705396e-52 | -8.615850e-47 |
Msa0064350 | Msa0976310 | 0.802544 | 5.334884e-49 | -8.615850e-47 |
Msa0072810 | Msa0976310 | 0.834346 | 3.160792e-56 | -8.615850e-47 |
Msa0101300 | Msa0976310 | 0.814455 | 1.527604e-51 | -8.615850e-47 |
Msa0103000 | Msa0976310 | 0.833033 | 6.725584e-56 | -8.615850e-47 |
Msa0619980 | Msa0976310 | 0.817912 | 2.577660e-52 | -8.615850e-47 |
Msa0623700 | Msa0976310 | 0.807465 | 4.988370e-50 | -8.615850e-47 |
Msa0690160 | Msa0976310 | 0.802326 | 5.915492e-49 | -8.615850e-47 |
Msa0706370 | Msa0976310 | 0.809715 | 1.649769e-50 | -8.615850e-47 |
Msa0724830 | Msa0976310 | 0.811214 | 7.829240e-51 | -8.615850e-47 |
Msa0743260 | Msa0976310 | 0.814350 | 1.611153e-51 | -8.615850e-47 |
Msa0754030 | Msa0976310 | 0.843741 | 1.162836e-58 | -8.615850e-47 |
Msa0776220 | Msa0976310 | 0.807290 | 5.434409e-50 | -8.615850e-47 |
Msa0787750 | Msa0976310 | 0.836333 | 9.951027e-57 | -8.615850e-47 |
Msa0807110 | Msa0976310 | 0.841014 | 6.141610e-58 | -8.615850e-47 |
Msa0814320 | Msa0976310 | 0.803274 | 3.770235e-49 | -8.615850e-47 |
Msa0833040 | Msa0976310 | 0.852665 | 3.976242e-61 | -8.615850e-47 |
Msa0124340 | Msa0976310 | 0.804380 | 2.221084e-49 | -8.615850e-47 |
Msa0134130 | Msa0976310 | 0.817954 | 2.522018e-52 | -8.615850e-47 |
Msa0145600 | Msa0976310 | 0.816160 | 6.381760e-52 | -8.615850e-47 |
Msa0147560 | Msa0976310 | 0.802013 | 6.862002e-49 | -8.615850e-47 |
Msa0148100 | Msa0976310 | 0.820811 | 5.630342e-53 | -8.615850e-47 |
Msa0184020 | Msa0976310 | 0.809136 | 2.196226e-50 | -8.615850e-47 |
Msa0185480 | Msa0976310 | 0.803944 | 2.737615e-49 | -8.615850e-47 |
Msa0199690 | Msa0976310 | 0.803659 | 3.137141e-49 | -8.615850e-47 |
Msa0203160 | Msa0976310 | 0.810446 | 1.148240e-50 | -8.615850e-47 |
Msa0219190 | Msa0976310 | 0.803223 | 3.862201e-49 | -8.615850e-47 |
Msa0219290 | Msa0976310 | -0.800706 | 1.271041e-48 | -8.615850e-47 |
Msa0235890 | Msa0976310 | 0.814023 | 1.902356e-51 | -8.615850e-47 |
Msa0371540 | Msa0976310 | 0.816770 | 4.659000e-52 | -8.615850e-47 |
Msa0372660 | Msa0976310 | 0.808085 | 3.683246e-50 | -8.615850e-47 |
Msa0372670 | Msa0976310 | 0.819201 | 1.315113e-52 | -8.615850e-47 |
Msa0380040 | Msa0976310 | 0.813294 | 2.753354e-51 | -8.615850e-47 |
Msa0402330 | Msa0976310 | 0.813325 | 2.710112e-51 | -8.615850e-47 |
Msa0419970 | Msa0976310 | 0.831992 | 1.219053e-55 | -8.615850e-47 |
Msa0426330 | Msa0976310 | 0.818182 | 2.239793e-52 | -8.615850e-47 |
Msa0449820 | Msa0976310 | 0.802359 | 5.824579e-49 | -8.615850e-47 |
Msa0466060 | Msa0976310 | 0.815009 | 1.151190e-51 | -8.615850e-47 |
Msa0257680 | Msa0976310 | 0.813627 | 2.326466e-51 | -8.615850e-47 |
Msa0258920 | Msa0976310 | -0.808295 | 3.322127e-50 | -8.615850e-47 |
Msa0260830 | Msa0976310 | 0.831897 | 1.286190e-55 | -8.615850e-47 |
Msa0298120 | Msa0976310 | 0.800423 | 1.451654e-48 | -8.615850e-47 |
Msa0311700 | Msa0976310 | 0.807725 | 4.393121e-50 | -8.615850e-47 |
Msa0335270 | Msa0976310 | 0.803512 | 3.364271e-49 | -8.615850e-47 |
Msa0337850 | Msa0976310 | 0.822860 | 1.889494e-53 | -8.615850e-47 |
Msa0342080 | Msa0976310 | 0.843574 | 1.288382e-58 | -8.615850e-47 |
Msa0355270 | Msa0976310 | 0.814955 | 1.183308e-51 | -8.615850e-47 |
Msa0517340 | Msa0976310 | 0.820309 | 7.342834e-53 | -8.615850e-47 |
Msa0560470 | Msa0976310 | 0.809912 | 1.496598e-50 | -8.615850e-47 |
Msa0571700 | Msa0976310 | 0.803979 | 2.692314e-49 | -8.615850e-47 |
Msa0847080 | Msa0976310 | 0.817988 | 2.477499e-52 | -8.615850e-47 |
Msa0863870 | Msa0976310 | 0.819100 | 1.386675e-52 | -8.615850e-47 |
Msa0872310 | Msa0976310 | 0.800463 | 1.424110e-48 | -8.615850e-47 |
Msa0874650 | Msa0976310 | 0.821178 | 4.634949e-53 | -8.615850e-47 |
Msa0900630 | Msa0976310 | 0.815794 | 7.700166e-52 | -8.615850e-47 |
Msa0905550 | Msa0976310 | 0.823052 | 1.704179e-53 | -8.615850e-47 |
Msa0937550 | Msa0976310 | 0.819096 | 1.389633e-52 | -8.615850e-47 |
Msa0939750 | Msa0976310 | 0.865044 | 7.853837e-65 | -8.615850e-47 |
Msa0944770 | Msa0976310 | 0.813507 | 2.471826e-51 | -8.615850e-47 |
Msa0965860 | Msa0976310 | 0.806269 | 8.929835e-50 | -8.615850e-47 |
Msa0976310 | Msa1041530 | 0.804985 | 1.660792e-49 | -8.615850e-47 |
Msa0976310 | Msa1063950 | 0.821976 | 3.031339e-53 | -8.615850e-47 |
Msa0976310 | Msa1133710 | 0.805192 | 1.502855e-49 | -8.615850e-47 |
Msa0976310 | Msa1150970 | 0.811232 | 7.758670e-51 | -8.615850e-47 |
Msa0976310 | Msa1171870 | 0.813971 | 1.953994e-51 | -8.615850e-47 |
Msa0976310 | Msa1175330 | 0.811554 | 6.605634e-51 | -8.615850e-47 |
Msa0976310 | Msa1206020 | 0.803378 | 3.587090e-49 | -8.615850e-47 |
Msa0976310 | Msa1217660 | 0.806303 | 8.781590e-50 | -8.615850e-47 |
Msa0976310 | Msa1218960 | 0.800760 | 1.239029e-48 | -8.615850e-47 |
Msa0976310 | Msa1235630 | 0.816606 | 5.069927e-52 | -8.615850e-47 |
Msa0976310 | Msa1254510 | 0.801150 | 1.031452e-48 | -8.615850e-47 |
Msa0976310 | Msa1280560 | 0.808698 | 2.725098e-50 | -8.615850e-47 |
Msa0976310 | Msa1304820 | 0.814856 | 1.244885e-51 | -8.615850e-47 |
Msa0976310 | Msa1306430 | 0.813232 | 2.840319e-51 | -8.615850e-47 |
Msa0976310 | Msa1315870 | 0.817046 | 4.039925e-52 | -8.615850e-47 |
Msa0976310 | Msa1328850 | 0.808374 | 3.195526e-50 | -8.615850e-47 |
Msa0976310 | Msa1340020 | 0.822408 | 2.407503e-53 | -8.615850e-47 |
Msa0976310 | Msa1343820 | 0.819584 | 1.075588e-52 | -8.615850e-47 |
Msa0976310 | Msa1397050 | 0.824546 | 7.612959e-54 | -8.615850e-47 |
Msa0976310 | Msa1397810 | 0.805538 | 1.271972e-49 | -8.615850e-47 |
Msa0976310 | Msa1404010 | 0.812531 | 4.045011e-51 | -8.615850e-47 |
Msa0976310 | Msa1404730 | 0.818498 | 1.899276e-52 | -8.615850e-47 |
Msa0976310 | Msa1408870 | 0.841126 | 5.739308e-58 | -8.615850e-47 |
Msa0976310 | Msa1420060 | 0.812051 | 5.149328e-51 | -8.615850e-47 |
Msa0976310 | Msa1423450 | 0.806097 | 9.705519e-50 | -8.615850e-47 |
Msa0976310 | Msa1431040 | 0.819698 | 1.013017e-52 | -8.615850e-47 |
Msa0976310 | Msa1460470 | 0.827531 | 1.486045e-54 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0976310 | MtrunA17_Chr6g0455361 | 69.932 | 439 | 51 | 5 | 1 | 358 | 14 | 452 | 0.0 | 577 |
Msa0976310 | MtrunA17_Chr6g0455361 | 80.120 | 166 | 10 | 1 | 502 | 644 | 287 | 452 | 2.96e-81 | 264 |
Msa0976310 | MtrunA17_Chr6g0455361 | 71.585 | 183 | 15 | 2 | 354 | 501 | 51 | 231 | 4.72e-77 | 253 |
Msa0976310 | MtrunA17_Chr6g0455351 | 66.592 | 449 | 33 | 7 | 1 | 369 | 14 | 425 | 0.0 | 545 |
Msa0976310 | MtrunA17_Chr6g0455351 | 59.948 | 387 | 48 | 7 | 351 | 644 | 48 | 420 | 5.12e-137 | 407 |
Msa0976310 | MtrunA17_Chr6g0455341 | 58.503 | 441 | 99 | 5 | 2 | 358 | 15 | 455 | 2.42e-169 | 491 |
Msa0976310 | MtrunA17_Chr6g0455341 | 60.000 | 405 | 48 | 4 | 354 | 644 | 51 | 455 | 1.85e-153 | 451 |
Msa0976310 | MtrunA17_Chr6g0454761 | 46.370 | 427 | 144 | 9 | 16 | 358 | 24 | 449 | 3.53e-102 | 332 |
Msa0976310 | MtrunA17_Chr6g0454761 | 46.301 | 419 | 139 | 10 | 25 | 358 | 520 | 937 | 9.59e-101 | 328 |
Msa0976310 | MtrunA17_Chr6g0454761 | 44.089 | 406 | 111 | 7 | 354 | 644 | 533 | 937 | 8.19e-96 | 315 |
Msa0976310 | MtrunA17_Chr6g0454761 | 43.457 | 405 | 114 | 8 | 354 | 644 | 46 | 449 | 2.62e-89 | 297 |
Msa0976310 | MtrunA17_Chr7g0219331 | 39.421 | 449 | 174 | 12 | 2 | 358 | 104 | 546 | 5.02e-87 | 282 |
Msa0976310 | MtrunA17_Chr7g0219331 | 33.575 | 414 | 153 | 8 | 351 | 644 | 135 | 546 | 5.00e-64 | 221 |
Msa0976310 | MtrunA17_Chr7g0219331 | 59.259 | 54 | 20 | 1 | 2 | 55 | 9 | 60 | 7.39e-12 | 68.2 |
Msa0976310 | MtrunA17_Chr7g0219301 | 38.753 | 449 | 177 | 12 | 2 | 358 | 11 | 453 | 5.99e-83 | 279 |
Msa0976310 | MtrunA17_Chr7g0219301 | 35.096 | 416 | 144 | 8 | 351 | 644 | 42 | 453 | 1.16e-63 | 226 |
Msa0976310 | MtrunA17_Chr7g0219301 | 35.443 | 395 | 151 | 12 | 17 | 358 | 533 | 876 | 1.64e-56 | 206 |
Msa0976310 | MtrunA17_Chr7g0219301 | 35.629 | 334 | 167 | 7 | 351 | 644 | 551 | 876 | 1.18e-49 | 186 |
Msa0976310 | MtrunA17_Chr7g0219291 | 27.601 | 721 | 268 | 19 | 173 | 644 | 95 | 810 | 1.29e-61 | 219 |
Msa0976310 | MtrunA17_Chr7g0219291 | 33.260 | 454 | 191 | 12 | 17 | 369 | 373 | 815 | 4.67e-60 | 215 |
Msa0976310 | MtrunA17_Chr7g0219121 | 34.979 | 466 | 176 | 19 | 18 | 369 | 25 | 477 | 2.60e-58 | 203 |
Msa0976310 | MtrunA17_Chr7g0219121 | 33.582 | 268 | 110 | 9 | 338 | 542 | 19 | 281 | 1.57e-29 | 122 |
Msa0976310 | MtrunA17_Chr7g0219121 | 37.427 | 171 | 79 | 3 | 502 | 644 | 302 | 472 | 1.74e-24 | 107 |
Msa0976310 | MtrunA17_Chr7g0219241 | 31.626 | 449 | 194 | 10 | 17 | 358 | 26 | 468 | 1.12e-57 | 202 |
Msa0976310 | MtrunA17_Chr7g0219241 | 40.761 | 184 | 65 | 5 | 347 | 489 | 38 | 218 | 6.64e-30 | 123 |
Msa0976310 | MtrunA17_Chr7g0219241 | 33.908 | 174 | 81 | 4 | 502 | 644 | 298 | 468 | 3.52e-23 | 103 |
Msa0976310 | MtrunA17_Chr2g0323511 | 31.011 | 445 | 204 | 10 | 13 | 355 | 31 | 474 | 2.06e-51 | 185 |
Msa0976310 | MtrunA17_Chr2g0323511 | 27.896 | 423 | 172 | 10 | 351 | 641 | 53 | 474 | 1.15e-37 | 146 |
Msa0976310 | MtrunA17_Chr7g0219181 | 29.241 | 448 | 209 | 10 | 17 | 358 | 25 | 470 | 1.09e-49 | 180 |
Msa0976310 | MtrunA17_Chr7g0219181 | 42.857 | 182 | 59 | 6 | 347 | 485 | 37 | 216 | 1.00e-29 | 123 |
Msa0976310 | MtrunA17_Chr7g0219181 | 34.884 | 172 | 83 | 4 | 502 | 644 | 299 | 470 | 4.68e-25 | 108 |
Msa0976310 | MtrunA17_Chr2g0323481 | 30.216 | 417 | 162 | 9 | 354 | 644 | 43 | 456 | 2.61e-43 | 162 |
Msa0976310 | MtrunA17_Chr2g0323481 | 28.954 | 411 | 191 | 13 | 34 | 347 | 39 | 445 | 2.08e-32 | 130 |
Msa0976310 | MtrunA17_Chr2g0323471 | 30.046 | 436 | 211 | 12 | 17 | 360 | 41 | 474 | 1.22e-42 | 160 |
Msa0976310 | MtrunA17_Chr2g0323471 | 28.780 | 410 | 173 | 9 | 354 | 644 | 63 | 472 | 2.77e-41 | 156 |
Msa0976310 | MtrunA17_Chr2g0323501 | 28.571 | 420 | 168 | 10 | 354 | 644 | 54 | 470 | 1.25e-41 | 157 |
Msa0976310 | MtrunA17_Chr2g0323501 | 39.873 | 158 | 68 | 6 | 21 | 152 | 37 | 193 | 1.03e-18 | 89.7 |
Msa0976310 | MtrunA17_Chr2g0323501 | 31.852 | 135 | 82 | 4 | 227 | 355 | 337 | 467 | 2.07e-15 | 79.3 |
Msa0976310 | MtrunA17_Chr6g0454741 | 37.319 | 276 | 75 | 8 | 387 | 627 | 25 | 237 | 1.95e-40 | 147 |
Msa0976310 | MtrunA17_Chr6g0454741 | 38.824 | 170 | 56 | 4 | 71 | 192 | 25 | 194 | 7.87e-25 | 103 |
Msa0976310 | MtrunA17_Chr6g0454741 | 53.750 | 80 | 29 | 2 | 270 | 341 | 158 | 237 | 2.86e-16 | 79.0 |
Msa0976310 | MtrunA17_Chr2g0323421 | 28.401 | 419 | 172 | 10 | 351 | 644 | 89 | 504 | 4.32e-40 | 154 |
Msa0976310 | MtrunA17_Chr2g0323421 | 28.829 | 444 | 209 | 15 | 12 | 355 | 65 | 501 | 1.47e-37 | 146 |
Msa0976310 | MtrunA17_Chr7g0219101 | 30.789 | 393 | 177 | 12 | 345 | 644 | 35 | 425 | 4.39e-40 | 152 |
Msa0976310 | MtrunA17_Chr7g0219101 | 65.574 | 61 | 18 | 1 | 22 | 79 | 30 | 90 | 3.69e-18 | 87.4 |
Msa0976310 | MtrunA17_Chr7g0219101 | 27.273 | 231 | 117 | 5 | 175 | 355 | 193 | 422 | 4.25e-16 | 81.3 |
Msa0976310 | MtrunA17_Chr8g0339641 | 29.812 | 426 | 163 | 11 | 354 | 644 | 43 | 467 | 5.14e-40 | 153 |
Msa0976310 | MtrunA17_Chr8g0339641 | 27.840 | 449 | 218 | 13 | 15 | 358 | 20 | 467 | 9.84e-31 | 126 |
Msa0976310 | MtrunA17_Chr7g0219251 | 49.351 | 154 | 61 | 4 | 17 | 153 | 24 | 177 | 8.04e-38 | 138 |
Msa0976310 | MtrunA17_Chr7g0219251 | 42.446 | 139 | 39 | 3 | 347 | 444 | 36 | 174 | 3.94e-23 | 97.1 |
Msa0976310 | MtrunA17_Chr3g0124341 | 28.842 | 423 | 166 | 9 | 354 | 644 | 48 | 467 | 1.65e-36 | 142 |
Msa0976310 | MtrunA17_Chr3g0124341 | 41.566 | 166 | 69 | 6 | 14 | 152 | 24 | 188 | 1.46e-20 | 95.5 |
Msa0976310 | MtrunA17_Chr3g0124341 | 35.036 | 137 | 79 | 5 | 228 | 358 | 335 | 467 | 3.18e-15 | 78.6 |
Msa0976310 | MtrunA17_Chr7g0219881 | 28.675 | 415 | 168 | 11 | 354 | 644 | 45 | 455 | 1.50e-35 | 140 |
Msa0976310 | MtrunA17_Chr7g0219881 | 39.241 | 158 | 76 | 3 | 15 | 152 | 22 | 179 | 5.40e-20 | 93.6 |
Msa0976310 | MtrunA17_Chr7g0219881 | 30.534 | 131 | 86 | 2 | 228 | 358 | 330 | 455 | 5.50e-13 | 71.6 |
Msa0976310 | MtrunA17_Chr7g0219211 | 47.590 | 166 | 68 | 5 | 3 | 149 | 11 | 176 | 5.22e-35 | 135 |
Msa0976310 | MtrunA17_Chr7g0219211 | 39.665 | 179 | 65 | 5 | 347 | 483 | 38 | 215 | 6.32e-28 | 115 |
Msa0976310 | MtrunA17_Chr7g0219311 | 48.819 | 127 | 56 | 3 | 229 | 348 | 23 | 147 | 2.97e-31 | 119 |
Msa0976310 | MtrunA17_Chr7g0219311 | 40.972 | 144 | 59 | 3 | 513 | 631 | 2 | 144 | 8.32e-27 | 106 |
Msa0976310 | MtrunA17_Chr7g0219191 | 44.000 | 150 | 67 | 3 | 17 | 149 | 15 | 164 | 6.84e-30 | 117 |
Msa0976310 | MtrunA17_Chr7g0219191 | 36.047 | 172 | 71 | 2 | 354 | 486 | 36 | 207 | 5.22e-24 | 100 |
Msa0976310 | MtrunA17_Chr7g0219341 | 44.203 | 138 | 68 | 3 | 228 | 358 | 10 | 145 | 7.31e-30 | 115 |
Msa0976310 | MtrunA17_Chr7g0219341 | 40.845 | 142 | 58 | 2 | 528 | 644 | 5 | 145 | 4.21e-28 | 110 |
Msa0976310 | MtrunA17_Chr3g0083761 | 26.683 | 416 | 176 | 10 | 354 | 644 | 45 | 456 | 2.18e-29 | 122 |
Msa0976310 | MtrunA17_Chr3g0083761 | 36.628 | 172 | 86 | 4 | 1 | 152 | 11 | 179 | 7.84e-21 | 96.3 |
Msa0976310 | MtrunA17_Chr3g0083761 | 29.323 | 133 | 86 | 2 | 233 | 358 | 325 | 456 | 2.89e-13 | 72.4 |
Msa0976310 | MtrunA17_Chr3g0087901 | 27.644 | 416 | 168 | 11 | 354 | 642 | 48 | 457 | 3.75e-29 | 121 |
Msa0976310 | MtrunA17_Chr3g0087901 | 41.279 | 172 | 77 | 6 | 1 | 153 | 14 | 180 | 7.70e-28 | 117 |
Msa0976310 | MtrunA17_Chr3g0087901 | 29.412 | 153 | 95 | 3 | 226 | 373 | 323 | 467 | 3.76e-16 | 81.6 |
Msa0976310 | MtrunA17_Chr7g0219351 | 35.238 | 210 | 76 | 6 | 67 | 218 | 15 | 222 | 7.19e-26 | 106 |
Msa0976310 | MtrunA17_Chr7g0219351 | 35.000 | 160 | 58 | 5 | 383 | 501 | 15 | 169 | 6.85e-23 | 97.8 |
Msa0976310 | MtrunA17_Chr2g0323441 | 41.401 | 157 | 70 | 3 | 15 | 149 | 19 | 175 | 1.31e-25 | 103 |
Msa0976310 | MtrunA17_Chr2g0323441 | 33.083 | 133 | 46 | 2 | 354 | 443 | 43 | 175 | 2.26e-12 | 65.9 |
Msa0976310 | MtrunA17_Chr7g0219221 | 34.667 | 150 | 73 | 2 | 520 | 644 | 4 | 153 | 2.40e-22 | 94.4 |
Msa0976310 | MtrunA17_Chr7g0219221 | 34.307 | 137 | 84 | 1 | 228 | 358 | 17 | 153 | 5.80e-20 | 87.4 |
Msa0976310 | MtrunA17_Chr3g0092011 | 40.741 | 162 | 69 | 5 | 17 | 152 | 20 | 180 | 3.73e-22 | 96.7 |
Msa0976310 | MtrunA17_Chr3g0092011 | 30.172 | 232 | 100 | 5 | 354 | 534 | 41 | 261 | 5.51e-22 | 96.3 |
Msa0976310 | MtrunA17_Chr7g0219201 | 33.140 | 172 | 86 | 3 | 502 | 644 | 26 | 197 | 4.75e-19 | 85.9 |
Msa0976310 | MtrunA17_Chr7g0219201 | 30.263 | 152 | 93 | 2 | 228 | 372 | 60 | 205 | 9.78e-14 | 70.5 |
Msa0976310 | MtrunA17_Chr3g0092001 | 33.929 | 112 | 66 | 4 | 252 | 358 | 4 | 112 | 9.20e-13 | 65.5 |
Msa0976310 | MtrunA17_Chr3g0092001 | 33.333 | 111 | 49 | 2 | 557 | 644 | 4 | 112 | 1.87e-12 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0976310 | AT3G29635.1 | 30.260 | 423 | 212 | 11 | 19 | 358 | 27 | 449 | 9.14e-54 | 191 |
Msa0976310 | AT3G29635.1 | 31.144 | 411 | 166 | 13 | 347 | 641 | 37 | 446 | 5.40e-46 | 169 |
Msa0976310 | AT5G39090.1 | 32.311 | 424 | 206 | 12 | 14 | 358 | 21 | 442 | 9.55e-52 | 185 |
Msa0976310 | AT5G39090.1 | 37.113 | 194 | 69 | 6 | 336 | 482 | 17 | 204 | 2.76e-25 | 109 |
Msa0976310 | AT5G39090.1 | 35.294 | 170 | 82 | 6 | 502 | 644 | 274 | 442 | 3.84e-21 | 97.4 |
Msa0976310 | AT3G29670.1 | 30.508 | 413 | 209 | 11 | 19 | 353 | 27 | 439 | 4.24e-50 | 181 |
Msa0976310 | AT3G29670.1 | 31.421 | 401 | 155 | 10 | 354 | 640 | 46 | 440 | 2.40e-47 | 173 |
Msa0976310 | AT3G29680.1 | 31.954 | 435 | 210 | 14 | 16 | 367 | 20 | 451 | 1.23e-49 | 179 |
Msa0976310 | AT3G29680.1 | 30.024 | 413 | 177 | 12 | 343 | 644 | 31 | 442 | 4.75e-43 | 161 |
Msa0976310 | AT5G39080.1 | 28.802 | 434 | 214 | 11 | 18 | 358 | 25 | 456 | 3.01e-45 | 167 |
Msa0976310 | AT5G39080.1 | 38.554 | 166 | 59 | 4 | 354 | 482 | 45 | 204 | 6.44e-27 | 115 |
Msa0976310 | AT5G39080.1 | 33.333 | 168 | 85 | 7 | 502 | 644 | 291 | 456 | 8.44e-19 | 90.1 |
Msa0976310 | AT5G61160.1 | 27.465 | 426 | 226 | 12 | 16 | 358 | 20 | 445 | 1.27e-43 | 163 |
Msa0976310 | AT5G61160.1 | 27.791 | 421 | 175 | 11 | 345 | 644 | 33 | 445 | 2.46e-41 | 156 |
Msa0976310 | AT5G39050.1 | 30.184 | 434 | 209 | 15 | 18 | 358 | 30 | 462 | 1.78e-41 | 157 |
Msa0976310 | AT5G39050.1 | 33.136 | 169 | 86 | 5 | 502 | 644 | 295 | 462 | 1.59e-20 | 95.5 |
Msa0976310 | AT5G39050.1 | 39.759 | 166 | 57 | 5 | 355 | 483 | 51 | 210 | 1.18e-18 | 89.7 |
Msa0976310 | AT3G29590.1 | 27.790 | 457 | 208 | 14 | 2 | 358 | 9 | 443 | 6.70e-39 | 149 |
Msa0976310 | AT3G29590.1 | 27.822 | 381 | 154 | 12 | 380 | 644 | 68 | 443 | 2.62e-33 | 133 |
Msa0976310 | AT1G03940.1 | 26.291 | 426 | 184 | 10 | 345 | 644 | 38 | 459 | 1.94e-32 | 131 |
Msa0976310 | AT1G03940.1 | 37.356 | 174 | 83 | 5 | 1 | 152 | 14 | 183 | 1.35e-23 | 105 |
Msa0976310 | AT1G03940.1 | 31.159 | 138 | 85 | 3 | 225 | 355 | 322 | 456 | 2.48e-15 | 79.3 |
Msa0976310 | AT1G03495.1 | 31.048 | 248 | 136 | 8 | 1 | 225 | 14 | 249 | 5.68e-24 | 104 |
Msa0976310 | AT3G29690.1 | 30.405 | 148 | 73 | 3 | 522 | 644 | 31 | 173 | 1.06e-15 | 76.3 |
Msa0976310 | AT3G29690.1 | 30.714 | 140 | 80 | 5 | 228 | 358 | 42 | 173 | 3.40e-12 | 65.9 |
Msa0976310 | AT3G29720.1 | 30.357 | 168 | 73 | 7 | 81 | 211 | 26 | 186 | 1.15e-11 | 65.5 |
Find 87 sgRNAs with CRISPR-Local
Find 344 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCCTTAACATAGTTTATTAT+TGG | 0.119259 | 6_4:-10282513 | None:intergenic |
CTCTTGTTGGTAACATAATT+TGG | 0.139584 | 6_4:+10277359 | Msa0976310:CDS |
TAGAATTAGAACATGTAATA+TGG | 0.221123 | 6_4:-10282776 | None:intergenic |
AAGATCTTTGAAACTTTCTT+TGG | 0.225581 | 6_4:-10277452 | None:intergenic |
TCAATTTCTACTATGTATAT+TGG | 0.237479 | 6_4:+10278081 | Msa0976310:CDS |
TCAATTTCTACTATGTATAT+TGG | 0.237479 | 6_4:+10283194 | Msa0976310:CDS |
TGTTAAATGGAGCTGAAAAT+TGG | 0.251450 | 6_4:+10278223 | Msa0976310:CDS |
TAATTCCAATTCCATTATTA+TGG | 0.255026 | 6_4:-10277756 | None:intergenic |
TAATTCCAATTCCATTATTA+TGG | 0.255026 | 6_4:-10282869 | None:intergenic |
AGTTACATGTGCTTATGTTT+TGG | 0.261109 | 6_4:+10283088 | Msa0976310:intron |
GAAAGTGAGTGTTTGAGATT+TGG | 0.273313 | 6_4:-10282426 | None:intergenic |
GGATTTGTAAATGCTTTAGA+AGG | 0.320887 | 6_4:+10283275 | Msa0976310:CDS |
GAAAGTGAGTGTTTGAGATT+TGG | 0.329141 | 6_4:-10277313 | None:intergenic |
AACATAGTTTATTATTGGTT+TGG | 0.329187 | 6_4:-10282508 | None:intergenic |
AAGATCTTTGAAACTTGCTT+TGG | 0.332060 | 6_4:-10282565 | None:intergenic |
CAAGACCATAATAATGGAAT+TGG | 0.332443 | 6_4:+10277751 | Msa0976310:intron |
CAAGACCATAATAATGGAAT+TGG | 0.332443 | 6_4:+10282864 | Msa0976310:CDS |
TATATTGGAAATTGTATTGC+AGG | 0.334002 | 6_4:+10278096 | Msa0976310:CDS |
TATATTGGAAATTGTATTGC+AGG | 0.334002 | 6_4:+10283209 | Msa0976310:CDS |
AAAGATGTTGGAGTGTTAAA+TGG | 0.336474 | 6_4:+10278210 | Msa0976310:CDS |
ACCAATAATAAACTATGTTA+AGG | 0.338239 | 6_4:+10282512 | Msa0976310:CDS |
GGTAAAATTTACTCTATTGC+TGG | 0.339239 | 6_4:+10278273 | Msa0976310:intron |
GGTAAAATTTACTCTATTGC+TGG | 0.339239 | 6_4:+10283386 | Msa0976310:intron |
GGATTTGTGAATGCTTTAGA+AGG | 0.361756 | 6_4:+10278162 | Msa0976310:CDS |
CTCTTGTTGGTAACATAACT+TGG | 0.362099 | 6_4:+10282472 | Msa0976310:CDS |
AACAATGGTGGAATTGAGAT+TGG | 0.366842 | 6_4:+10283521 | Msa0976310:CDS |
TTGATACAAGACCATAATAA+TGG | 0.367593 | 6_4:+10277745 | Msa0976310:intron |
TTGATACAAGACCATAATAA+TGG | 0.367593 | 6_4:+10282858 | Msa0976310:CDS |
AACAATGGTGGAATTGAGAT+TGG | 0.373662 | 6_4:+10278408 | Msa0976310:CDS |
AGTGAAGTTGGTGATGAAAA+AGG | 0.373809 | 6_4:-10277184 | None:intergenic |
ATCAATGATCTATCAAATAA+AGG | 0.374744 | 6_4:-10282840 | None:intergenic |
TTAACTACATCATGTTTCAT+TGG | 0.375298 | 6_4:-10277856 | None:intergenic |
ACACACCATGCTGCTTTAGA+TGG | 0.377821 | 6_4:+10277607 | Msa0976310:CDS |
ATGACTTCAACTGATAAAAC+TGG | 0.378778 | 6_4:+10283470 | Msa0976310:CDS |
TTTGAGACAAAGAACTTGAT+TGG | 0.379225 | 6_4:+10278132 | Msa0976310:CDS |
TTTGAGACAAAGAACTTAGT+TGG | 0.379238 | 6_4:+10283245 | Msa0976310:CDS |
GTTAAATGGAGCTGAAAATT+GGG | 0.387315 | 6_4:+10278224 | Msa0976310:CDS |
ACACATCATGCTGCTTTAGA+TGG | 0.395750 | 6_4:+10282720 | Msa0976310:CDS |
CAACACTTTCTCCCTCTTGT+TGG | 0.397153 | 6_4:+10277346 | Msa0976310:CDS |
CAACACTTTCTCCCTCTTGT+TGG | 0.397153 | 6_4:+10282459 | Msa0976310:CDS |
TTTGAAAATTTCTCATGAAA+AGG | 0.401565 | 6_4:+10277522 | Msa0976310:CDS |
AGAATTAGAACATGTAATAT+GGG | 0.428687 | 6_4:-10282775 | None:intergenic |
GATTGGTTTGGCTTTAAGTA+AGG | 0.439820 | 6_4:+10283538 | Msa0976310:CDS |
TTTGGACTCAACAACATTGA+AGG | 0.440495 | 6_4:-10277434 | None:intergenic |
TTTGGACTCAACAACATTGA+AGG | 0.449429 | 6_4:-10282547 | None:intergenic |
ATGACTTCAACTGATAAAAC+AGG | 0.450314 | 6_4:+10278357 | Msa0976310:CDS |
CCAATAATAAACTATGTTAA+GGG | 0.457390 | 6_4:+10282513 | Msa0976310:CDS |
TTGAATAGTGTGAAAGATGT+TGG | 0.459417 | 6_4:+10278198 | Msa0976310:CDS |
AAACTATAAAACTCAAACCT+TGG | 0.460147 | 6_4:-10283413 | None:intergenic |
TAAAAGAAGAGAAGTTCAAC+TGG | 0.468150 | 6_4:-10277247 | None:intergenic |
GGCTTTAAGTAAGGAAGAGA+TGG | 0.477261 | 6_4:+10283547 | Msa0976310:CDS |
CAACTATAAAACTCAAACCT+TGG | 0.492090 | 6_4:-10278300 | None:intergenic |
GTTCATAGAAGAAATTCAAC+TGG | 0.510021 | 6_4:-10282365 | None:intergenic |
AAAGTGAGTGGAAGTGAAGT+TGG | 0.513468 | 6_4:-10277196 | None:intergenic |
GGGATAAATAAAGCTTTGAA+TGG | 0.513854 | 6_4:+10283296 | Msa0976310:CDS |
GTCACTTTGTTTCCAAACAA+TGG | 0.518249 | 6_4:+10282678 | Msa0976310:intron |
TGGTGGAATTGAGATTGGTT+TGG | 0.519435 | 6_4:+10278413 | Msa0976310:CDS |
TGGTGGAATTGAGATTGGTT+TGG | 0.519435 | 6_4:+10283526 | Msa0976310:CDS |
GATTTGTGAATGCTTTAGAA+GGG | 0.524587 | 6_4:+10278163 | Msa0976310:CDS |
AGCAAAAGCAGAACCACCTA+AGG | 0.528570 | 6_4:+10278005 | Msa0976310:intron |
AACAAAAGCAGAAGAACCTA+AGG | 0.532232 | 6_4:+10283118 | Msa0976310:CDS |
GATTTGTAAATGCTTTAGAA+GGG | 0.534694 | 6_4:+10283276 | Msa0976310:CDS |
GAAAGTAGAAATAACAATGG+TGG | 0.549927 | 6_4:+10283509 | Msa0976310:CDS |
GTTACTTTGTTTCCAAACAA+TGG | 0.552487 | 6_4:+10277565 | Msa0976310:CDS |
GGAGAAAGTGTTGAAGTGTG+AGG | 0.562323 | 6_4:-10282449 | None:intergenic |
GAGAAAGTGTTGAAGTGTGA+GGG | 0.570828 | 6_4:-10282448 | None:intergenic |
GAAAGTAGGAATAACAATGG+TGG | 0.573498 | 6_4:+10278396 | Msa0976310:CDS |
TATACATAGTAGAAATTGAA+GGG | 0.573548 | 6_4:-10278077 | None:intergenic |
TATACATAGTAGAAATTGAA+GGG | 0.573548 | 6_4:-10283190 | None:intergenic |
ATTGGTTTGGATGAATCACT+AGG | 0.573893 | 6_4:-10282495 | None:intergenic |
ATTCAAAAGCTTAAAGAACA+TGG | 0.580692 | 6_4:+10277907 | Msa0976310:CDS |
CATAGAAGAAATTCAACTGG+TGG | 0.581606 | 6_4:-10282362 | None:intergenic |
AAAAGATCAAAGAAAGTGAG+TGG | 0.584138 | 6_4:-10277208 | None:intergenic |
ACTCTATTGCTGGATCTCCA+AGG | 0.593370 | 6_4:+10283396 | Msa0976310:CDS |
ATATACATAGTAGAAATTGA+AGG | 0.597786 | 6_4:-10278078 | None:intergenic |
ATATACATAGTAGAAATTGA+AGG | 0.597786 | 6_4:-10283191 | None:intergenic |
CAAATTATGTTACCAACAAG+AGG | 0.604743 | 6_4:-10277358 | None:intergenic |
CAAGTTATGTTACCAACAAG+AGG | 0.606312 | 6_4:-10282471 | None:intergenic |
AAGAAGAGAAGTTCAACTGG+TGG | 0.614324 | 6_4:-10277244 | None:intergenic |
GTTGTTGATTTGATGAAACA+AGG | 0.620622 | 6_4:+10282903 | Msa0976310:CDS |
GTTGTTGATTTGTTGAAACA+TGG | 0.636841 | 6_4:+10277790 | Msa0976310:CDS |
GGTGAAAGTAGGAATAACAA+TGG | 0.647980 | 6_4:+10278393 | Msa0976310:CDS |
AGTGAAAGTAGAAATAACAA+TGG | 0.666136 | 6_4:+10283506 | Msa0976310:CDS |
AAGTTATGTTACCAACAAGA+GGG | 0.676076 | 6_4:-10282470 | None:intergenic |
ACTCTATTGCTGGATCACCA+AGG | 0.676816 | 6_4:+10278283 | Msa0976310:CDS |
AAATTATGTTACCAACAAGA+GGG | 0.678218 | 6_4:-10277357 | None:intergenic |
GTTGATTTGTTGAAACATGG+CGG | 0.733101 | 6_4:+10277793 | Msa0976310:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAATAATATGAAAATGA+AGG | + | chr6_4:10277930-10277949 | Msa0976310:CDS | 10.0% |
!! | AAATCTAAGAAACAATATAT+TGG | - | chr6_4:10280001-10280020 | None:intergenic | 15.0% |
!! | GAATATATATTTAATATCGT+TGG | - | chr6_4:10280041-10280060 | None:intergenic | 15.0% |
!! | GATATTAAATATATATTCAC+TGG | + | chr6_4:10280043-10280062 | Msa0976310:intron | 15.0% |
!! | AAAAAACTATTTAAGAATAC+TGG | - | chr6_4:10280319-10280338 | None:intergenic | 15.0% |
!!! | CACTATTTTCTTAATTTAAA+GGG | + | chr6_4:10281151-10281170 | Msa0976310:intron | 15.0% |
!!! | ACTATTTTCTTAATTTAAAG+GGG | + | chr6_4:10281152-10281171 | Msa0976310:intron | 15.0% |
!! | ATATTAACAAGAAAACATAT+AGG | - | chr6_4:10281243-10281262 | None:intergenic | 15.0% |
!!! | TCTTGTTTTTTTTTTTACTT+GGG | - | chr6_4:10281350-10281369 | None:intergenic | 15.0% |
!!! | ATCTTGTTTTTTTTTTTACT+TGG | - | chr6_4:10281351-10281370 | None:intergenic | 15.0% |
!!! | TAGAAATTTTGTTCTTATTA+AGG | + | chr6_4:10281400-10281419 | Msa0976310:intron | 15.0% |
!! | TATTAAATAATCTTAGTTGT+TGG | - | chr6_4:10281526-10281545 | None:intergenic | 15.0% |
!!! | AACACAAATAAAAAGTATTT+AGG | - | chr6_4:10281623-10281642 | None:intergenic | 15.0% |
!!! | ATTAATACTAATACTCTTTT+AGG | + | chr6_4:10281928-10281947 | Msa0976310:intron | 15.0% |
!!! | ATAAATATTAGTACTCTTTT+AGG | + | chr6_4:10281968-10281987 | Msa0976310:intron | 15.0% |
!! | ATAATAATAAGATGAAGTAT+AGG | + | chr6_4:10281998-10282017 | Msa0976310:intron | 15.0% |
!!! | ATAAATATTAGTACTCTTTT+AGG | + | chr6_4:10281968-10281987 | Msa0976310:intron | 15.0% |
!! | TTTGAAAATTTCTCATGAAA+AGG | + | chr6_4:10277522-10277541 | Msa0976310:CDS | 20.0% |
!!! | TAAGTACTTTTATGAAATCA+TGG | + | chr6_4:10277638-10277657 | Msa0976310:intron | 20.0% |
!! | ATCAATGATCTATCAAAAAA+AGG | - | chr6_4:10277730-10277749 | None:intergenic | 20.0% |
!! | TAATTCCAATTCCATTATTA+TGG | - | chr6_4:10277759-10277778 | None:intergenic | 20.0% |
!!! | TTAAGCTTTTGAATATTTGA+AGG | - | chr6_4:10277901-10277920 | None:intergenic | 20.0% |
!! | TATACATAGTAGAAATTGAA+GGG | - | chr6_4:10278080-10278099 | None:intergenic | 20.0% |
!! | ATATACATAGTAGAAATTGA+AGG | - | chr6_4:10278081-10278100 | None:intergenic | 20.0% |
!! | TCAATTTCTACTATGTATAT+TGG | + | chr6_4:10278081-10278100 | Msa0976310:CDS | 20.0% |
!! | TAATGATCAAAGTTGTATAT+TGG | + | chr6_4:10278822-10278841 | Msa0976310:intron | 20.0% |
!! | TAGAAATATACCTTCAAATA+TGG | + | chr6_4:10279260-10279279 | Msa0976310:intron | 20.0% |
!! | TATATATTTAATATCGTTGG+AGG | - | chr6_4:10280038-10280057 | None:intergenic | 20.0% |
!!! | CTTAAATAGTTTTTTTTACC+TGG | + | chr6_4:10280324-10280343 | Msa0976310:intron | 20.0% |
!! | GAATAAGCTAATGTATTTAT+TGG | - | chr6_4:10280462-10280481 | None:intergenic | 20.0% |
!!! | TGTTAAAACCTCTTTTTAAA+TGG | - | chr6_4:10280791-10280810 | None:intergenic | 20.0% |
!! | ATAGGTAATAATATGTTTAG+AGG | - | chr6_4:10281783-10281802 | None:intergenic | 20.0% |
!!! | TGTTAATTTGTTAGGTATAT+AGG | - | chr6_4:10281801-10281820 | None:intergenic | 20.0% |
!!! | CTTAATACTGTTAATTTGTT+AGG | - | chr6_4:10281809-10281828 | None:intergenic | 20.0% |
!! | AATTAAGAACATATTTCCAA+TGG | + | chr6_4:10282088-10282107 | Msa0976310:intron | 20.0% |
!!! | AACATAGTTTATTATTGGTT+TGG | - | chr6_4:10282511-10282530 | None:intergenic | 20.0% |
!! | ACCAATAATAAACTATGTTA+AGG | + | chr6_4:10282512-10282531 | Msa0976310:CDS | 20.0% |
!! | CCAATAATAAACTATGTTAA+GGG | + | chr6_4:10282513-10282532 | Msa0976310:CDS | 20.0% |
!!! | TTCATGAGAATTTTTCAATA+GGG | - | chr6_4:10282634-10282653 | None:intergenic | 20.0% |
!!! | TTTCATGAGAATTTTTCAAT+AGG | - | chr6_4:10282635-10282654 | None:intergenic | 20.0% |
!! | ATTGAAAAATTCTCATGAAA+AGG | + | chr6_4:10282635-10282654 | Msa0976310:intron | 20.0% |
!! | AGAATTAGAACATGTAATAT+GGG | - | chr6_4:10282778-10282797 | None:intergenic | 20.0% |
!! | TAGAATTAGAACATGTAATA+TGG | - | chr6_4:10282779-10282798 | None:intergenic | 20.0% |
!! | ATCAATGATCTATCAAATAA+AGG | - | chr6_4:10282843-10282862 | None:intergenic | 20.0% |
!! | TAATTCCAATTCCATTATTA+TGG | - | chr6_4:10277759-10277778 | None:intergenic | 20.0% |
!!! | ATCTTGAGACTTTTATTATT+TGG | - | chr6_4:10282933-10282952 | None:intergenic | 20.0% |
!!! | TTAAGCTTTTGAATATTTGA+AGG | - | chr6_4:10277901-10277920 | None:intergenic | 20.0% |
!! | TATACATAGTAGAAATTGAA+GGG | - | chr6_4:10278080-10278099 | None:intergenic | 20.0% |
!! | ATATACATAGTAGAAATTGA+AGG | - | chr6_4:10278081-10278100 | None:intergenic | 20.0% |
!! | TCAATTTCTACTATGTATAT+TGG | + | chr6_4:10278081-10278100 | Msa0976310:CDS | 20.0% |
!!! | GAGTTTTATAGTTTTGATTT+TGG | + | chr6_4:10283422-10283441 | Msa0976310:CDS | 20.0% |
!!! | TATAGTTTTGATTTTGGATT+TGG | + | chr6_4:10283428-10283447 | Msa0976310:CDS | 20.0% |
!! | TCACTTTCTTTGATCTTTTA+TGG | + | chr6_4:10277212-10277231 | Msa0976310:CDS | 25.0% |
! | AAATTATGTTACCAACAAGA+GGG | - | chr6_4:10277360-10277379 | None:intergenic | 25.0% |
!! | AACATAGTTTATGATTGGTT+TGG | - | chr6_4:10277398-10277417 | None:intergenic | 25.0% |
! | ACCAATCATAAACTATGTTA+AGG | + | chr6_4:10277399-10277418 | Msa0976310:intron | 25.0% |
! | TCCTTAACATAGTTTATGAT+TGG | - | chr6_4:10277403-10277422 | None:intergenic | 25.0% |
!!! | AAGATCTTTGAAACTTTCTT+TGG | - | chr6_4:10277455-10277474 | None:intergenic | 25.0% |
!! | TCATGAGAAATTTTCAAATG+TGG | - | chr6_4:10277520-10277539 | None:intergenic | 25.0% |
! | ATGATAAAAAAGATGAATCG+AGG | - | chr6_4:10277690-10277709 | None:intergenic | 25.0% |
!!! | AAAAAAGGTGTTAGATTTTC+AGG | - | chr6_4:10277715-10277734 | None:intergenic | 25.0% |
! | TTGATACAAGACCATAATAA+TGG | + | chr6_4:10277745-10277764 | Msa0976310:intron | 25.0% |
!! | ATCTTGAGACTTTTATTATC+TGG | - | chr6_4:10277820-10277839 | None:intergenic | 25.0% |
!! | CTCAAGATTATGAATTTTTC+TGG | + | chr6_4:10277832-10277851 | Msa0976310:CDS | 25.0% |
! | TTAACTACATCATGTTTCAT+TGG | - | chr6_4:10277859-10277878 | None:intergenic | 25.0% |
! | ATTCAAAAGCTTAAAGAACA+TGG | + | chr6_4:10277907-10277926 | Msa0976310:CDS | 25.0% |
!! | AGTGGTTTTCATAATTTCTA+TGG | + | chr6_4:10278035-10278054 | Msa0976310:intron | 25.0% |
! | TATATTGGAAATTGTATTGC+AGG | + | chr6_4:10278096-10278115 | Msa0976310:CDS | 25.0% |
! | AAGAACTTGATTGGAAAAAA+TGG | + | chr6_4:10278141-10278160 | Msa0976310:CDS | 25.0% |
!! | AATATGTATAGTGGAATTGA+AGG | + | chr6_4:10278252-10278271 | Msa0976310:intron | 25.0% |
!!! | GAGTTTTATAGTTGTGATTT+TGG | + | chr6_4:10278309-10278328 | Msa0976310:CDS | 25.0% |
!! | TATAGTTGTGATTTTGGATT+TGG | + | chr6_4:10278315-10278334 | Msa0976310:CDS | 25.0% |
!!! | GAAGTCATATCAACTTTTTT+TGG | - | chr6_4:10278345-10278364 | None:intergenic | 25.0% |
!! | TTTTCTACCAATTTTGTTGA+AGG | + | chr6_4:10278462-10278481 | Msa0976310:intron | 25.0% |
! | AATTAAGCCACTACAATAAT+TGG | - | chr6_4:10278956-10278975 | None:intergenic | 25.0% |
! | TTGTTGCTGAAAAGATTATT+AGG | + | chr6_4:10279111-10279130 | Msa0976310:intron | 25.0% |
! | ATAGTTTACTTGCACAATTA+TGG | - | chr6_4:10279185-10279204 | None:intergenic | 25.0% |
! | ATCGAAAATCGTTACTATAA+CGG | - | chr6_4:10279827-10279846 | None:intergenic | 25.0% |
!!! | TTCTTTGATAATGTAATCCA+AGG | + | chr6_4:10280131-10280150 | Msa0976310:intron | 25.0% |
!! | TAAATACATTAGCTTATTCG+AGG | + | chr6_4:10280463-10280482 | Msa0976310:intron | 25.0% |
! | CTAAAGGATTTATTATCCAT+GGG | - | chr6_4:10280736-10280755 | None:intergenic | 25.0% |
! | ACATGAAGAAGAAATCTATA+TGG | - | chr6_4:10280765-10280784 | None:intergenic | 25.0% |
! | TAATTTAGATGTACACCAAA+TGG | - | chr6_4:10280815-10280834 | None:intergenic | 25.0% |
! | TAATGTATAGACCATGTAAT+CGG | + | chr6_4:10281002-10281021 | Msa0976310:intron | 25.0% |
! | ATCATCATCATTTGATTCTA+TGG | + | chr6_4:10281192-10281211 | Msa0976310:intron | 25.0% |
! | GTAAATAAGCTAATAATTCC+TGG | - | chr6_4:10281872-10281891 | None:intergenic | 25.0% |
! | TCCTCTATATATAATTGCTT+TGG | + | chr6_4:10282168-10282187 | Msa0976310:intron | 25.0% |
! | TCCAAAGCAATTATATATAG+AGG | - | chr6_4:10282172-10282191 | None:intergenic | 25.0% |
! | AAGAGTTTCATAGAAAAAAG+TGG | - | chr6_4:10282403-10282422 | None:intergenic | 25.0% |
! | CCCTTAACATAGTTTATTAT+TGG | - | chr6_4:10282516-10282535 | None:intergenic | 25.0% |
!!! | TCATGAGAATTTTTCAATAG+GGG | - | chr6_4:10282633-10282652 | None:intergenic | 25.0% |
!!! | CAACTACTTTTATGAAATCA+TGG | + | chr6_4:10282751-10282770 | Msa0976310:CDS | 25.0% |
!!! | AATAAAGGTGTTAGATTTTC+AGG | - | chr6_4:10282828-10282847 | None:intergenic | 25.0% |
! | TTGATACAAGACCATAATAA+TGG | + | chr6_4:10277745-10277764 | Msa0976310:intron | 25.0% |
!! | CTCAAGATTATGAATTTTTC+TGG | + | chr6_4:10277832-10277851 | Msa0976310:CDS | 25.0% |
! | TTAACTAGATCATGTTTCAT+TGG | - | chr6_4:10282972-10282991 | None:intergenic | 25.0% |
!! | GAAAAAGTGGTTTTCATATT+TGG | + | chr6_4:10283143-10283162 | Msa0976310:CDS | 25.0% |
! | TATATTGGAAATTGTATTGC+AGG | + | chr6_4:10278096-10278115 | Msa0976310:CDS | 25.0% |
! | AAGAACTTAGTTGGAAAAAA+TGG | + | chr6_4:10283254-10283273 | Msa0976310:CDS | 25.0% |
!!! | GATTTGTAAATGCTTTAGAA+GGG | + | chr6_4:10283276-10283295 | Msa0976310:CDS | 25.0% |
! | AAACTATAAAACTCAAACCT+TGG | - | chr6_4:10283416-10283435 | None:intergenic | 25.0% |
!!! | GAAGTCATATCAACTTTTTT+TGG | - | chr6_4:10278345-10278364 | None:intergenic | 25.0% |
! | AGTGAAAGTAGAAATAACAA+TGG | + | chr6_4:10283506-10283525 | Msa0976310:CDS | 25.0% |
AAAAGATCAAAGAAAGTGAG+TGG | - | chr6_4:10277211-10277230 | None:intergenic | 30.0% | |
TAAAAGAAGAGAAGTTCAAC+TGG | - | chr6_4:10277250-10277269 | None:intergenic | 30.0% | |
!! | AAGAGTGTCATAGAAAAAAG+TGG | - | chr6_4:10277290-10277309 | None:intergenic | 30.0% |
CAAATTATGTTACCAACAAG+AGG | - | chr6_4:10277361-10277380 | None:intergenic | 30.0% | |
!! | CTCTTGTTGGTAACATAATT+TGG | + | chr6_4:10277359-10277378 | Msa0976310:CDS | 30.0% |
! | GTTACTTTGTTTCCAAACAA+TGG | + | chr6_4:10277565-10277584 | Msa0976310:CDS | 30.0% |
AGAATTAGAACATGCAACAT+AGG | - | chr6_4:10277665-10277684 | None:intergenic | 30.0% | |
! | CAAGACCATAATAATGGAAT+TGG | + | chr6_4:10277751-10277770 | Msa0976310:intron | 30.0% |
!! | GTTGTTGATTTGTTGAAACA+TGG | + | chr6_4:10277790-10277809 | Msa0976310:CDS | 30.0% |
! | AGTTACATGTGCTTATGTTT+TGG | + | chr6_4:10277975-10277994 | Msa0976310:intron | 30.0% |
!!! | AAAACCACTTTTTCAACCTT+AGG | - | chr6_4:10278024-10278043 | None:intergenic | 30.0% |
! | TTTCTATGGATTGTAGATCA+AGG | + | chr6_4:10278049-10278068 | Msa0976310:intron | 30.0% |
! | TTTGAGACAAAGAACTTGAT+TGG | + | chr6_4:10278132-10278151 | Msa0976310:CDS | 30.0% |
!! | GATTTGTGAATGCTTTAGAA+GGG | + | chr6_4:10278163-10278182 | Msa0976310:CDS | 30.0% |
TTGAATAGTGTGAAAGATGT+TGG | + | chr6_4:10278198-10278217 | Msa0976310:CDS | 30.0% | |
! | AAAGATGTTGGAGTGTTAAA+TGG | + | chr6_4:10278210-10278229 | Msa0976310:CDS | 30.0% |
TGTTAAATGGAGCTGAAAAT+TGG | + | chr6_4:10278223-10278242 | Msa0976310:CDS | 30.0% | |
GTTAAATGGAGCTGAAAATT+GGG | + | chr6_4:10278224-10278243 | Msa0976310:CDS | 30.0% | |
TGGGTTTCTAATATGTATAG+TGG | + | chr6_4:10278243-10278262 | Msa0976310:intron | 30.0% | |
GGTAAAATTTACTCTATTGC+TGG | + | chr6_4:10278273-10278292 | Msa0976310:intron | 30.0% | |
CAACTATAAAACTCAAACCT+TGG | - | chr6_4:10278303-10278322 | None:intergenic | 30.0% | |
ATGACTTCAACTGATAAAAC+AGG | + | chr6_4:10278357-10278376 | Msa0976310:CDS | 30.0% | |
TTCAAGTCCTTCAACAAAAT+TGG | - | chr6_4:10278472-10278491 | None:intergenic | 30.0% | |
CTATAGCATATTCAAACTAG+TGG | - | chr6_4:10278517-10278536 | None:intergenic | 30.0% | |
! | TGACATGTATTTTGCAATAG+AGG | + | chr6_4:10278871-10278890 | Msa0976310:intron | 30.0% |
! | GACATGTATTTTGCAATAGA+GGG | + | chr6_4:10278872-10278891 | Msa0976310:intron | 30.0% |
TACATAGCCAAAATACTCAT+TGG | + | chr6_4:10278925-10278944 | Msa0976310:intron | 30.0% | |
TGTAGTGGCTTAATTCATAA+AGG | + | chr6_4:10278961-10278980 | Msa0976310:intron | 30.0% | |
! | ATATTGACTATTGTTCCAAC+AGG | - | chr6_4:10279075-10279094 | None:intergenic | 30.0% |
!! | GCTCTATTTAAGATGTTTTC+TGG | + | chr6_4:10279153-10279172 | Msa0976310:intron | 30.0% |
! | TAAGACTCTATTTTATCCCA+GGG | - | chr6_4:10279220-10279239 | None:intergenic | 30.0% |
! | ATAAGACTCTATTTTATCCC+AGG | - | chr6_4:10279221-10279240 | None:intergenic | 30.0% |
TGTCTTAACACCATATTTGA+AGG | - | chr6_4:10279273-10279292 | None:intergenic | 30.0% | |
! | GTATTTCTACCACTCTATTA+TGG | + | chr6_4:10279304-10279323 | Msa0976310:intron | 30.0% |
TTGGAATTAAGAATGGTCTT+TGG | - | chr6_4:10279380-10279399 | None:intergenic | 30.0% | |
AAGACCATTCTTAATTCCAA+AGG | + | chr6_4:10279380-10279399 | Msa0976310:intron | 30.0% | |
AGACCATTCTTAATTCCAAA+GGG | + | chr6_4:10279381-10279400 | Msa0976310:intron | 30.0% | |
!!! | ATTTTTTCTCGAATGGACTA+TGG | + | chr6_4:10279406-10279425 | Msa0976310:intron | 30.0% |
AATGAGATATATGCTCTATG+TGG | - | chr6_4:10279466-10279485 | None:intergenic | 30.0% | |
! | TACCCATTGAACTTATTTCT+TGG | + | chr6_4:10279584-10279603 | Msa0976310:intron | 30.0% |
! | ACCCATTGAACTTATTTCTT+GGG | + | chr6_4:10279585-10279604 | Msa0976310:intron | 30.0% |
TCCCAAGAAATAAGTTCAAT+GGG | - | chr6_4:10279589-10279608 | None:intergenic | 30.0% | |
ATCCCAAGAAATAAGTTCAA+TGG | - | chr6_4:10279590-10279609 | None:intergenic | 30.0% | |
!! | GGATTTCTAGTCATTTATGT+CGG | + | chr6_4:10279606-10279625 | Msa0976310:intron | 30.0% |
!! | GATTTCTAGTCATTTATGTC+GGG | + | chr6_4:10279607-10279626 | Msa0976310:intron | 30.0% |
ATATTGTAACACCTTATCAG+AGG | - | chr6_4:10280081-10280100 | None:intergenic | 30.0% | |
!! | ATCAAAGAATTTTGTTGTCC+TGG | - | chr6_4:10280120-10280139 | None:intergenic | 30.0% |
ATAATGTAATCCAAGGTTCA+TGG | + | chr6_4:10280138-10280157 | Msa0976310:intron | 30.0% | |
TTAAATAGAACCATGAACCT+TGG | - | chr6_4:10280151-10280170 | None:intergenic | 30.0% | |
GCATTAGCAAGTTATTGATA+GGG | - | chr6_4:10280185-10280204 | None:intergenic | 30.0% | |
AGCATTAGCAAGTTATTGAT+AGG | - | chr6_4:10280186-10280205 | None:intergenic | 30.0% | |
GTCAAACATTTCATGTCATT+TGG | + | chr6_4:10280656-10280675 | Msa0976310:intron | 30.0% | |
ATGTTAGATAAGTCTCTGTA+TGG | - | chr6_4:10280695-10280714 | None:intergenic | 30.0% | |
CCTAAAGGATTTATTATCCA+TGG | - | chr6_4:10280737-10280756 | None:intergenic | 30.0% | |
CCATGGATAATAAATCCTTT+AGG | + | chr6_4:10280734-10280753 | Msa0976310:intron | 30.0% | |
ATCTATATGGAACAACCTAA+AGG | - | chr6_4:10280752-10280771 | None:intergenic | 30.0% | |
CATGTTCACCATTTAAAAAG+AGG | + | chr6_4:10280780-10280799 | Msa0976310:intron | 30.0% | |
!! | AAGAGGTTTTAACATCCATT+TGG | + | chr6_4:10280797-10280816 | Msa0976310:intron | 30.0% |
TGAATAGCAGAAAGATCAAT+TGG | + | chr6_4:10280835-10280854 | Msa0976310:intron | 30.0% | |
! | AGAATCCATCTCATCTTTTA+TGG | + | chr6_4:10280915-10280934 | Msa0976310:intron | 30.0% |
AGAAAAACAACACTTCTTGA+AGG | + | chr6_4:10280962-10280981 | Msa0976310:intron | 30.0% | |
AATGTATAGACCATGTAATC+GGG | + | chr6_4:10281003-10281022 | Msa0976310:intron | 30.0% | |
AGTGATTTCTTACCTATTTG+AGG | + | chr6_4:10281045-10281064 | Msa0976310:intron | 30.0% | |
GATGTAACATAACCTCAAAT+AGG | - | chr6_4:10281060-10281079 | None:intergenic | 30.0% | |
! | AAAGATCAAGAGAGAACTTT+TGG | + | chr6_4:10281436-10281455 | Msa0976310:intron | 30.0% |
! | GTTTTATAAGTTTACGTACC+AGG | + | chr6_4:10281851-10281870 | Msa0976310:intron | 30.0% |
ATTTCTTTCTCTTTCAACCA+TGG | + | chr6_4:10282213-10282232 | Msa0976310:intron | 30.0% | |
! | AATGATTTTTCATGTGTCCA+TGG | - | chr6_4:10282233-10282252 | None:intergenic | 30.0% |
! | TCGCTTTCTTTGATCTTTTA+TGG | + | chr6_4:10282330-10282349 | Msa0976310:intron | 30.0% |
GTTCATAGAAGAAATTCAAC+TGG | - | chr6_4:10282368-10282387 | None:intergenic | 30.0% | |
AAGTTATGTTACCAACAAGA+GGG | - | chr6_4:10282473-10282492 | None:intergenic | 30.0% | |
!! | AAGATCTTTGAAACTTGCTT+TGG | - | chr6_4:10282568-10282587 | None:intergenic | 30.0% |
! | CAAGACCATAATAATGGAAT+TGG | + | chr6_4:10277751-10277770 | Msa0976310:intron | 30.0% |
!! | GTTGTTGATTTGATGAAACA+AGG | + | chr6_4:10282903-10282922 | Msa0976310:CDS | 30.0% |
! | AGTTACATGTGCTTATGTTT+TGG | + | chr6_4:10277975-10277994 | Msa0976310:intron | 30.0% |
!!! | AAAACCACTTTTTCAACCTT+AGG | - | chr6_4:10278024-10278043 | None:intergenic | 30.0% |
! | AGTGGTTTTCATATTTGGTA+TGG | + | chr6_4:10283148-10283167 | Msa0976310:CDS | 30.0% |
! | TTTGAGACAAAGAACTTAGT+TGG | + | chr6_4:10283245-10283264 | Msa0976310:CDS | 30.0% |
! | GGATTTGTAAATGCTTTAGA+AGG | + | chr6_4:10283275-10283294 | Msa0976310:CDS | 30.0% |
!! | GGGATAAATAAAGCTTTGAA+TGG | + | chr6_4:10278183-10278202 | Msa0976310:CDS | 30.0% |
! | AAAGATGTTGGAGTGTTAAA+TGG | + | chr6_4:10278210-10278229 | Msa0976310:CDS | 30.0% |
TGTTAAATGGAGCTGAAAAT+TGG | + | chr6_4:10278223-10278242 | Msa0976310:CDS | 30.0% | |
GTTAAATGGAGCTGAAAATT+GGG | + | chr6_4:10278224-10278243 | Msa0976310:CDS | 30.0% | |
TTCTAATATGTCTAGTGGAA+TGG | + | chr6_4:10283361-10283380 | Msa0976310:intron | 30.0% | |
GGTAAAATTTACTCTATTGC+TGG | + | chr6_4:10278273-10278292 | Msa0976310:intron | 30.0% | |
ATGACTTCAACTGATAAAAC+TGG | + | chr6_4:10278357-10278376 | Msa0976310:CDS | 30.0% | |
GAAAGTAGAAATAACAATGG+TGG | + | chr6_4:10283509-10283528 | Msa0976310:CDS | 30.0% | |
!!! | GGTTTTGTTGTGTCAAGATA+GGG | - | chr6_4:10277166-10277185 | None:intergenic | 35.0% |
!!! | AGGTTTTGTTGTGTCAAGAT+AGG | - | chr6_4:10277167-10277186 | None:intergenic | 35.0% |
!! | AGTGAAGTTGGTGATGAAAA+AGG | - | chr6_4:10277187-10277206 | None:intergenic | 35.0% |
! | GAAAGTGAGTGTTTGAGATT+TGG | - | chr6_4:10277316-10277335 | None:intergenic | 35.0% |
!! | ATTGGTTTGGATGAATCACT+TGG | - | chr6_4:10277385-10277404 | None:intergenic | 35.0% |
TTTGGACTCAACAACATTGA+AGG | - | chr6_4:10277437-10277456 | None:intergenic | 35.0% | |
! | TCCAAACAATGGTTTTTGCA+TGG | + | chr6_4:10277576-10277595 | Msa0976310:CDS | 35.0% |
! | CCAAACAATGGTTTTTGCAT+GGG | + | chr6_4:10277577-10277596 | Msa0976310:CDS | 35.0% |
!! | ATTTTCCATCTAAAGCAGCA+TGG | - | chr6_4:10277615-10277634 | None:intergenic | 35.0% |
!! | GTTGATTTGTTGAAACATGG+CGG | + | chr6_4:10277793-10277812 | Msa0976310:CDS | 35.0% |
! | TATGGATTGTAGATCAAGGT+TGG | + | chr6_4:10278053-10278072 | Msa0976310:intron | 35.0% |
! | GGATTTGTGAATGCTTTAGA+AGG | + | chr6_4:10278162-10278181 | Msa0976310:CDS | 35.0% |
!!! | AAAACAGGAGCATTTTCTCT+TGG | + | chr6_4:10278372-10278391 | Msa0976310:CDS | 35.0% |
! | CATTTTCTCTTGGTGAAAGT+AGG | + | chr6_4:10278382-10278401 | Msa0976310:CDS | 35.0% |
GGTGAAAGTAGGAATAACAA+TGG | + | chr6_4:10278393-10278412 | Msa0976310:CDS | 35.0% | |
GAAAGTAGGAATAACAATGG+TGG | + | chr6_4:10278396-10278415 | Msa0976310:CDS | 35.0% | |
! | AACAATGGTGGAATTGAGAT+TGG | + | chr6_4:10278408-10278427 | Msa0976310:CDS | 35.0% |
!! | GATTGGTTTGGCTTTAAGTA+AGG | + | chr6_4:10278425-10278444 | Msa0976310:intron | 35.0% |
TTGCGACATGTATTTCGAAA+CGG | - | chr6_4:10278637-10278656 | None:intergenic | 35.0% | |
! | GGATCTTCCAATGAGTATTT+TGG | - | chr6_4:10278935-10278954 | None:intergenic | 35.0% |
GGAAGATCCAATTATTGTAG+TGG | + | chr6_4:10278946-10278965 | Msa0976310:intron | 35.0% | |
! | AAGACTCTATTTTATCCCAG+GGG | - | chr6_4:10279219-10279238 | None:intergenic | 35.0% |
GAGTGGTAGAAATACGATAT+TGG | - | chr6_4:10279299-10279318 | None:intergenic | 35.0% | |
GTCTCAATACCATAATAGAG+TGG | - | chr6_4:10279316-10279335 | None:intergenic | 35.0% | |
GTATTGAGACCACTCTAATA+TGG | + | chr6_4:10279326-10279345 | Msa0976310:intron | 35.0% | |
!! | TGTCCCTTTGGAATTAAGAA+TGG | - | chr6_4:10279387-10279406 | None:intergenic | 35.0% |
TTCGAGAAAAAATGTCCCTT+TGG | - | chr6_4:10279399-10279418 | None:intergenic | 35.0% | |
!!! | AAGGGACATTTTTTCTCGAA+TGG | + | chr6_4:10279399-10279418 | Msa0976310:intron | 35.0% |
TTAAGAACACTCTTGTAGCT+AGG | + | chr6_4:10279431-10279450 | Msa0976310:intron | 35.0% | |
ACAAGTTGTGAAGTGATATG+AGG | - | chr6_4:10279561-10279580 | None:intergenic | 35.0% | |
TAATCCTTTCGCCAAAGAAT+CGG | + | chr6_4:10279700-10279719 | Msa0976310:intron | 35.0% | |
! | TGAAAACTTAGCCGATTCTT+TGG | - | chr6_4:10279714-10279733 | None:intergenic | 35.0% |
ATCGTTACTATAACGGTAAG+AGG | - | chr6_4:10279820-10279839 | None:intergenic | 35.0% | |
! | TCGTTATGGATTAACACAAC+TGG | + | chr6_4:10279869-10279888 | Msa0976310:intron | 35.0% |
! | TGGTAATTGTTTTCCCCTAA+GGG | + | chr6_4:10279889-10279908 | Msa0976310:intron | 35.0% |
TGCTAGCAAAAATTCCCTTA+GGG | - | chr6_4:10279906-10279925 | None:intergenic | 35.0% | |
TTGCTAGCAAAAATTCCCTT+AGG | - | chr6_4:10279907-10279926 | None:intergenic | 35.0% | |
!! | TATATTGGCTCAGTCTACTT+TGG | - | chr6_4:10279986-10280005 | None:intergenic | 35.0% |
!! | AAGAATTTTGTTGTCCTGGA+AGG | - | chr6_4:10280116-10280135 | None:intergenic | 35.0% |
! | ACTTGCTAATGCTCATTACT+AGG | + | chr6_4:10280193-10280212 | Msa0976310:intron | 35.0% |
TATCACGACATAGGTTATGT+CGG | + | chr6_4:10280238-10280257 | Msa0976310:intron | 35.0% | |
! | AGACATTAGTTTCTTTCCCA+TGG | + | chr6_4:10280717-10280736 | Msa0976310:intron | 35.0% |
! | TATTTGGTAGACTTGCCTTT+TGG | - | chr6_4:10280874-10280893 | None:intergenic | 35.0% |
AGAAGCCATAAAAGATGAGA+TGG | - | chr6_4:10280923-10280942 | None:intergenic | 35.0% | |
CTATGGTCACATTAGCATTT+AGG | + | chr6_4:10281209-10281228 | Msa0976310:intron | 35.0% | |
! | ACTAGTGAGTTTTACTCTCT+TGG | + | chr6_4:10281294-10281313 | Msa0976310:intron | 35.0% |
! | CTAGTGAGTTTTACTCTCTT+GGG | + | chr6_4:10281295-10281314 | Msa0976310:intron | 35.0% |
GAGAGCTCTATTTATAAGTG+AGG | + | chr6_4:10281479-10281498 | Msa0976310:intron | 35.0% | |
AGCTCTATTTATAAGTGAGG+AGG | + | chr6_4:10281482-10281501 | Msa0976310:intron | 35.0% | |
TCCAATGGATAAGAGTTGAA+TGG | + | chr6_4:10282103-10282122 | Msa0976310:intron | 35.0% | |
ATAAGAGTTGAATGGCTGTT+AGG | + | chr6_4:10282111-10282130 | Msa0976310:intron | 35.0% | |
TTAGGACTTACGGATATTTG+AGG | + | chr6_4:10282129-10282148 | Msa0976310:intron | 35.0% | |
!!! | GGTTTTGTTGTGTCAAGATA+GGG | - | chr6_4:10277166-10277185 | None:intergenic | 35.0% |
!!! | AGGTTTTGTTGTGTCAAGAT+AGG | - | chr6_4:10277167-10277186 | None:intergenic | 35.0% |
AAAAGATCAAAGAAAGCGAG+TGG | - | chr6_4:10282329-10282348 | None:intergenic | 35.0% | |
CATAGAAGAAATTCAACTGG+TGG | - | chr6_4:10282365-10282384 | None:intergenic | 35.0% | |
! | GAAAGTGAGTGTTTGAGATT+TGG | - | chr6_4:10277316-10277335 | None:intergenic | 35.0% |
CAAGTTATGTTACCAACAAG+AGG | - | chr6_4:10282474-10282493 | None:intergenic | 35.0% | |
!! | CTCTTGTTGGTAACATAACT+TGG | + | chr6_4:10282472-10282491 | Msa0976310:CDS | 35.0% |
!! | ATTGGTTTGGATGAATCACT+AGG | - | chr6_4:10277385-10277404 | None:intergenic | 35.0% |
TTTGGACTCAACAACATTGA+AGG | - | chr6_4:10277437-10277456 | None:intergenic | 35.0% | |
! | GTCACTTTGTTTCCAAACAA+TGG | + | chr6_4:10282678-10282697 | Msa0976310:intron | 35.0% |
CCAATGCAAAAACCATTGTT+TGG | - | chr6_4:10282693-10282712 | None:intergenic | 35.0% | |
! | CCAAACAATGGTTTTTGCAT+TGG | + | chr6_4:10277577-10277596 | Msa0976310:CDS | 35.0% |
!! | GTTGATTTGATGAAACAAGG+TGG | + | chr6_4:10282906-10282925 | Msa0976310:intron | 35.0% |
AACAAAAGCAGAAGAACCTA+AGG | + | chr6_4:10283118-10283137 | Msa0976310:CDS | 35.0% | |
AGAACCTAAGGTTGAAAAAG+TGG | + | chr6_4:10283130-10283149 | Msa0976310:CDS | 35.0% | |
TTGAATGGTGTGAAAGATGT+TGG | + | chr6_4:10283311-10283330 | Msa0976310:intron | 35.0% | |
TGGGTTTCTAATATGTCTAG+TGG | + | chr6_4:10283356-10283375 | Msa0976310:intron | 35.0% | |
AATATGTCTAGTGGAATGGA+AGG | + | chr6_4:10283365-10283384 | Msa0976310:intron | 35.0% | |
! | AACAATGGTGGAATTGAGAT+TGG | + | chr6_4:10278408-10278427 | Msa0976310:CDS | 35.0% |
!! | GATTGGTTTGGCTTTAAGTA+AGG | + | chr6_4:10278425-10278444 | Msa0976310:intron | 35.0% |
AAAGTGAGTGGAAGTGAAGT+TGG | - | chr6_4:10277199-10277218 | None:intergenic | 40.0% | |
AAGAAGAGAAGTTCAACTGG+TGG | - | chr6_4:10277247-10277266 | None:intergenic | 40.0% | |
CCCATGCAAAAACCATTGTT+TGG | - | chr6_4:10277580-10277599 | None:intergenic | 40.0% | |
ACCACCTAAGGTTGAAAAAG+TGG | + | chr6_4:10278017-10278036 | Msa0976310:intron | 40.0% | |
!!! | ACCACTTTTTCAACCTTAGG+TGG | - | chr6_4:10278021-10278040 | None:intergenic | 40.0% |
! | TGGTGGAATTGAGATTGGTT+TGG | + | chr6_4:10278413-10278432 | Msa0976310:CDS | 40.0% |
!! | GGCTTTAAGTAAGGAAGAGT+TGG | + | chr6_4:10278434-10278453 | Msa0976310:intron | 40.0% |
GACATGTATTTCGAAACGGA+TGG | - | chr6_4:10278633-10278652 | None:intergenic | 40.0% | |
AAGATTATTAGGCTGAGTCG+CGG | + | chr6_4:10279122-10279141 | Msa0976310:intron | 40.0% | |
CAAGTAAACTATCAACCACG+AGG | + | chr6_4:10279193-10279212 | Msa0976310:intron | 40.0% | |
GAAGTAAGAGGTTAGAATGG+TGG | - | chr6_4:10279356-10279375 | None:intergenic | 40.0% | |
GGAGAAGTAAGAGGTTAGAA+TGG | - | chr6_4:10279359-10279378 | None:intergenic | 40.0% | |
! | ATGGTCTTTGGAGAAGTAAG+AGG | - | chr6_4:10279368-10279387 | None:intergenic | 40.0% |
GATATATGCTCTATGTGGAG+TGG | - | chr6_4:10279461-10279480 | None:intergenic | 40.0% | |
ATGATTCCTGAAGCGATAAG+AGG | - | chr6_4:10279509-10279528 | None:intergenic | 40.0% | |
! | TTCGATTTTTGCGATAGTCG+CGG | + | chr6_4:10279841-10279860 | Msa0976310:intron | 40.0% |
! | CTGGTAATTGTTTTCCCCTA+AGG | + | chr6_4:10279888-10279907 | Msa0976310:intron | 40.0% |
GCTAGCAAAAATTCCCTTAG+GGG | - | chr6_4:10279905-10279924 | None:intergenic | 40.0% | |
!! | CGCTTTGAAATCCTCTGATA+AGG | + | chr6_4:10280067-10280086 | Msa0976310:intron | 40.0% |
ATGCATTTGTGTATCCTTCC+AGG | + | chr6_4:10280099-10280118 | Msa0976310:intron | 40.0% | |
ATCACGACATAGGTTATGTC+GGG | + | chr6_4:10280239-10280258 | Msa0976310:intron | 40.0% | |
TGTAATCAATGGCACACTTG+AGG | + | chr6_4:10280267-10280286 | Msa0976310:intron | 40.0% | |
!! | TGAAAGTGTGAGAGCATCAT+TGG | - | chr6_4:10280296-10280315 | None:intergenic | 40.0% |
ACTAGCACATCATATGATCC+AGG | - | chr6_4:10280345-10280364 | None:intergenic | 40.0% | |
GGATCATATGATGTGCTAGT+AGG | + | chr6_4:10280345-10280364 | Msa0976310:intron | 40.0% | |
ACTACGTTGAGAAGATCTTG+AGG | - | chr6_4:10280389-10280408 | None:intergenic | 40.0% | |
GGTTCCAATTTGCAACCAAA+AGG | + | chr6_4:10280856-10280875 | Msa0976310:intron | 40.0% | |
!! | CTTGCCTTTTGGTTGCAAAT+TGG | - | chr6_4:10280863-10280882 | None:intergenic | 40.0% |
AGGCAAGTCTACCAAATACT+AGG | + | chr6_4:10280876-10280895 | Msa0976310:intron | 40.0% | |
GTCGAACAAGACCTAGTATT+TGG | - | chr6_4:10280890-10280909 | None:intergenic | 40.0% | |
AACACTTCTTGAAGGCTAGT+TGG | + | chr6_4:10280970-10280989 | Msa0976310:intron | 40.0% | |
!! | AGAGTATTGACCCGATTACA+TGG | - | chr6_4:10281016-10281035 | None:intergenic | 40.0% |
CTGATCACAATTCAGTGATC+AGG | - | chr6_4:10281107-10281126 | None:intergenic | 40.0% | |
! | AGTTTTACTCTCTTGGGATC+TGG | + | chr6_4:10281301-10281320 | Msa0976310:intron | 40.0% |
!! | TTTTGGTGTGAGTAGAAGTG+AGG | + | chr6_4:10281453-10281472 | Msa0976310:intron | 40.0% |
ACCAACAAAAGCTTGTGTCT+TGG | - | chr6_4:10281745-10281764 | None:intergenic | 40.0% | |
GCCATTCAACTCTTATCCAT+TGG | - | chr6_4:10282107-10282126 | None:intergenic | 40.0% | |
TGAATGGCTGTTAGGACTTA+CGG | + | chr6_4:10282119-10282138 | Msa0976310:intron | 40.0% | |
!! | GAGAAAGTGTTGAAGTGTGA+GGG | - | chr6_4:10277338-10277357 | None:intergenic | 40.0% |
!! | ACACATCATGCTGCTTTAGA+TGG | + | chr6_4:10282720-10282739 | Msa0976310:CDS | 40.0% |
! | TGGTGGAATTGAGATTGGTT+TGG | + | chr6_4:10278413-10278432 | Msa0976310:CDS | 40.0% |
!! | GGCTTTAAGTAAGGAAGAGA+TGG | + | chr6_4:10283547-10283566 | Msa0976310:CDS | 40.0% |
CAACACTTTCTCCCTCTTGT+TGG | + | chr6_4:10277346-10277365 | Msa0976310:CDS | 45.0% | |
!! | ACACACCATGCTGCTTTAGA+TGG | + | chr6_4:10277607-10277626 | Msa0976310:CDS | 45.0% |
AGCAAAAGCAGAACCACCTA+AGG | + | chr6_4:10278005-10278024 | Msa0976310:intron | 45.0% | |
ACTCTATTGCTGGATCACCA+AGG | + | chr6_4:10278283-10278302 | Msa0976310:CDS | 45.0% | |
GTATATTGGCATGTGTGCAG+TGG | + | chr6_4:10278836-10278855 | Msa0976310:intron | 45.0% | |
TTGTTCCAACAGGCAAACGT+TGG | - | chr6_4:10279065-10279084 | None:intergenic | 45.0% | |
GGTGGAACACCATATTAGAG+TGG | - | chr6_4:10279338-10279357 | None:intergenic | 45.0% | |
TCTCAACCTCTTATCGCTTC+AGG | + | chr6_4:10279500-10279519 | Msa0976310:intron | 45.0% | |
ACCATCATGAGTGACTCCAT+AGG | + | chr6_4:10279632-10279651 | Msa0976310:intron | 45.0% | |
TCAGATGAGACAACTGCCTA+TGG | - | chr6_4:10279651-10279670 | None:intergenic | 45.0% | |
! | TTAGCCGATTCTTTGGCGAA+AGG | - | chr6_4:10279707-10279726 | None:intergenic | 45.0% |
AGAGTTACTACTCTCCACAG+GGG | - | chr6_4:10279765-10279784 | None:intergenic | 45.0% | |
GAGAGTTACTACTCTCCACA+GGG | - | chr6_4:10279766-10279785 | None:intergenic | 45.0% | |
AGAGAGTTACTACTCTCCAC+AGG | - | chr6_4:10279767-10279786 | None:intergenic | 45.0% | |
TAGTCGCGGTACTATCGTTA+TGG | + | chr6_4:10279855-10279874 | Msa0976310:intron | 45.0% | |
CAGCTAGTGAAGAAGCAAGT+TGG | - | chr6_4:10279939-10279958 | None:intergenic | 45.0% | |
CTATGTCGTGATAGTTGTGC+AGG | - | chr6_4:10280231-10280250 | None:intergenic | 45.0% | |
CTGCACAACTATCACGACAT+AGG | + | chr6_4:10280229-10280248 | Msa0976310:intron | 45.0% | |
GTCGGGTCTAGTGTAATCAA+TGG | + | chr6_4:10280256-10280275 | Msa0976310:intron | 45.0% | |
GGGATTGTCTGTCCTATCTT+CGG | - | chr6_4:10281330-10281349 | None:intergenic | 45.0% | |
! | GCCAAGACACAAGCTTTTGT+TGG | + | chr6_4:10281741-10281760 | Msa0976310:intron | 45.0% |
!! | AGTGAGGTTGGTGATGGAAA+AGG | - | chr6_4:10282305-10282324 | None:intergenic | 45.0% |
AAAGAAAGCGAGTGGAAGTG+AGG | - | chr6_4:10282321-10282340 | None:intergenic | 45.0% | |
!! | GGAGAAAGTGTTGAAGTGTG+AGG | - | chr6_4:10277339-10277358 | None:intergenic | 45.0% |
CAACACTTTCTCCCTCTTGT+TGG | + | chr6_4:10277346-10277365 | Msa0976310:CDS | 45.0% | |
ACTCTATTGCTGGATCTCCA+AGG | + | chr6_4:10283396-10283415 | Msa0976310:CDS | 45.0% | |
!! | AACAAAAAATTATAAAAATT+TGG | - | chr6_4:10278785-10278804 | None:intergenic | 5.0% |
CTTTGCCAACGTTTGCCTGT+TGG | + | chr6_4:10279057-10279076 | Msa0976310:intron | 50.0% | |
ATTAGGCTGAGTCGCGGATT+AGG | + | chr6_4:10279128-10279147 | Msa0976310:intron | 50.0% | |
GCCTATGGAGTCACTCATGA+TGG | - | chr6_4:10279636-10279655 | None:intergenic | 50.0% | |
! | GGGATCTGGAATCCGAAGAT+AGG | + | chr6_4:10281315-10281334 | Msa0976310:intron | 50.0% |
CTAAGACTTTCTCGTACGCG+TGG | + | chr6_4:10281652-10281671 | Msa0976310:intron | 50.0% | |
!! | AGTGGAAGTGAGGTTGGTGA+TGG | - | chr6_4:10282311-10282330 | None:intergenic | 50.0% |
AAAGCGAGTGGAAGTGAGGT+TGG | - | chr6_4:10282317-10282336 | None:intergenic | 50.0% | |
! | ATTTTATCCCAGGGGCCTCG+TGG | - | chr6_4:10279211-10279230 | None:intergenic | 55.0% |
TCCACAGGGGCTGTAAGAGT+GGG | - | chr6_4:10279752-10279771 | None:intergenic | 55.0% | |
ACTATCAACCACGAGGCCCC+TGG | + | chr6_4:10279200-10279219 | Msa0976310:intron | 60.0% | |
CTATCAACCACGAGGCCCCT+GGG | + | chr6_4:10279201-10279220 | Msa0976310:intron | 60.0% | |
ACCCACTCTTACAGCCCCTG+TGG | + | chr6_4:10279748-10279767 | Msa0976310:intron | 60.0% | |
CTCCACAGGGGCTGTAAGAG+TGG | - | chr6_4:10279753-10279772 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6_4 | gene | 10277151 | 10283586 | 10277151 | ID=Msa0976310;Name=Msa0976310 |
chr6_4 | mRNA | 10277151 | 10283586 | 10277151 | ID=Msa0976310-mRNA-1;Parent=Msa0976310;Name=Msa0976310-mRNA-1;_AED=0.15;_eAED=0.17;_QI=0|0|0|1|0|0|11|0|644 |
chr6_4 | exon | 10277151 | 10277385 | 10277151 | ID=Msa0976310-mRNA-1:exon:3800;Parent=Msa0976310-mRNA-1 |
chr6_4 | exon | 10277425 | 10277640 | 10277425 | ID=Msa0976310-mRNA-1:exon:3801;Parent=Msa0976310-mRNA-1 |
chr6_4 | exon | 10277755 | 10277951 | 10277755 | ID=Msa0976310-mRNA-1:exon:3802;Parent=Msa0976310-mRNA-1 |
chr6_4 | exon | 10277977 | 10277982 | 10277977 | ID=Msa0976310-mRNA-1:exon:3803;Parent=Msa0976310-mRNA-1 |
chr6_4 | exon | 10278007 | 10278035 | 10278007 | ID=Msa0976310-mRNA-1:exon:3804;Parent=Msa0976310-mRNA-1 |
chr6_4 | exon | 10278071 | 10278261 | 10278071 | ID=Msa0976310-mRNA-1:exon:3805;Parent=Msa0976310-mRNA-1 |
chr6_4 | exon | 10278274 | 10278441 | 10278274 | ID=Msa0976310-mRNA-1:exon:3806;Parent=Msa0976310-mRNA-1 |
chr6_4 | exon | 10282358 | 10282573 | 10282358 | ID=Msa0976310-mRNA-1:exon:3807;Parent=Msa0976310-mRNA-1 |
chr6_4 | exon | 10282679 | 10282924 | 10282679 | ID=Msa0976310-mRNA-1:exon:3808;Parent=Msa0976310-mRNA-1 |
chr6_4 | exon | 10283090 | 10283317 | 10283090 | ID=Msa0976310-mRNA-1:exon:3809;Parent=Msa0976310-mRNA-1 |
chr6_4 | exon | 10283387 | 10283586 | 10283387 | ID=Msa0976310-mRNA-1:exon:3810;Parent=Msa0976310-mRNA-1 |
chr6_4 | CDS | 10277151 | 10277385 | 10277151 | ID=Msa0976310-mRNA-1:cds;Parent=Msa0976310-mRNA-1 |
chr6_4 | CDS | 10277425 | 10277640 | 10277425 | ID=Msa0976310-mRNA-1:cds;Parent=Msa0976310-mRNA-1 |
chr6_4 | CDS | 10277755 | 10277951 | 10277755 | ID=Msa0976310-mRNA-1:cds;Parent=Msa0976310-mRNA-1 |
chr6_4 | CDS | 10277977 | 10277982 | 10277977 | ID=Msa0976310-mRNA-1:cds;Parent=Msa0976310-mRNA-1 |
chr6_4 | CDS | 10278007 | 10278035 | 10278007 | ID=Msa0976310-mRNA-1:cds;Parent=Msa0976310-mRNA-1 |
chr6_4 | CDS | 10278071 | 10278261 | 10278071 | ID=Msa0976310-mRNA-1:cds;Parent=Msa0976310-mRNA-1 |
chr6_4 | CDS | 10278274 | 10278441 | 10278274 | ID=Msa0976310-mRNA-1:cds;Parent=Msa0976310-mRNA-1 |
chr6_4 | CDS | 10282358 | 10282573 | 10282358 | ID=Msa0976310-mRNA-1:cds;Parent=Msa0976310-mRNA-1 |
chr6_4 | CDS | 10282679 | 10282924 | 10282679 | ID=Msa0976310-mRNA-1:cds;Parent=Msa0976310-mRNA-1 |
chr6_4 | CDS | 10283090 | 10283317 | 10283090 | ID=Msa0976310-mRNA-1:cds;Parent=Msa0976310-mRNA-1 |
chr6_4 | CDS | 10283387 | 10283586 | 10283387 | ID=Msa0976310-mRNA-1:cds;Parent=Msa0976310-mRNA-1 |
Gene Sequence |
Protein sequence |