Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0941640 | XP_024641137.1 | 91.036 | 357 | 8 | 1 | 1 | 333 | 1 | 357 | 0.0 | 652 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0941640 | A0A072U7P6 | 90.196 | 357 | 11 | 2 | 1 | 333 | 1 | 357 | 0.0 | 642 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0706390 | Msa0941640 | 0.802345 | 5.864419e-49 | -8.615850e-47 |
| Msa0941640 | Msa0960830 | 0.803699 | 3.077453e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0941640 | MtrunA17_Chr6g0457661 | 97.661 | 171 | 4 | 0 | 163 | 333 | 1 | 171 | 4.66e-119 | 340 |
| Msa0941640 | MtrunA17_Chr6g0457671 | 99.286 | 140 | 1 | 0 | 1 | 140 | 1 | 140 | 6.56e-99 | 289 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0941640 | AT5G38380.1 | 65.439 | 353 | 92 | 4 | 1 | 325 | 1 | 351 | 5.17e-169 | 474 |
| Msa0941640 | AT5G38380.2 | 71.984 | 257 | 66 | 3 | 1 | 254 | 1 | 254 | 6.90e-136 | 387 |
Find 96 sgRNAs with CRISPR-Local
Find 440 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTGAGCACTATCCTATT+TGG | 0.162753 | 6_3:-15482430 | Msa0941640:CDS |
| GTGATTTGCAGCTTAATATT+AGG | 0.248010 | 6_3:-15481675 | Msa0941640:CDS |
| GCAATATTGGGTGAGTATTC+TGG | 0.305937 | 6_3:-15484251 | Msa0941640:CDS |
| CTGCAAATTTCTTGAGGATA+TGG | 0.315872 | 6_3:-15485099 | Msa0941640:CDS |
| ATAAAACCGTTTATTATAGA+AGG | 0.317904 | 6_3:+15484816 | None:intergenic |
| CGATCATCCGACAAGTGATT+AGG | 0.321672 | 6_3:+15487045 | None:intergenic |
| TTATTAATTCAGAGCAATAT+TGG | 0.332182 | 6_3:-15484264 | Msa0941640:intron |
| CTCCTCACCAAGGCATTTGA+TGG | 0.337044 | 6_3:-15481763 | Msa0941640:CDS |
| GATCATCCGACAAGTGATTA+GGG | 0.338192 | 6_3:+15487046 | None:intergenic |
| ATGTTAATTCCTATTATTGC+TGG | 0.339793 | 6_3:-15482885 | Msa0941640:CDS |
| CAATGGGAAATTGCCATTAT+CGG | 0.348720 | 6_3:-15482461 | Msa0941640:CDS |
| TGCCGATTGATCCGTTCATT+AGG | 0.357727 | 6_3:-15480186 | Msa0941640:three_prime_UTR |
| GATAGGATACCAGCAATAAT+AGG | 0.362895 | 6_3:+15482876 | None:intergenic |
| GCCGATTGATCCGTTCATTA+GGG | 0.367572 | 6_3:-15480185 | Msa0941640:three_prime_UTR |
| ATATCAAAATGTTTCCAAAT+AGG | 0.372295 | 6_3:+15482416 | None:intergenic |
| TGCAGCTTAATATTAGGTTT+AGG | 0.376680 | 6_3:-15481669 | Msa0941640:intron |
| GCGAAGCAATCTGTGGAAAA+AGG | 0.376838 | 6_3:-15484189 | Msa0941640:intron |
| AAGAAAGCCCAAGCCGATAA+TGG | 0.384271 | 6_3:+15482448 | None:intergenic |
| GAGTATTCTGGCGCTGTCCT+TGG | 0.395620 | 6_3:-15484239 | Msa0941640:CDS |
| GATAGCCGCAGGAGCCAGAC+AGG | 0.397048 | 6_3:+15485012 | None:intergenic |
| TATTAATTCAGAGCAATATT+GGG | 0.400586 | 6_3:-15484263 | Msa0941640:intron |
| AATATTGAATGTCAAATAGT+TGG | 0.406850 | 6_3:-15479966 | Msa0941640:three_prime_UTR |
| GCATACAAAACCAACCTAAC+TGG | 0.428342 | 6_3:+15484744 | None:intergenic |
| GGAAATTGCCATTATCGGCT+TGG | 0.433421 | 6_3:-15482456 | Msa0941640:CDS |
| TCACTCTCTTTGTCTCACTT+TGG | 0.437153 | 6_3:-15487094 | Msa0941640:five_prime_UTR |
| GTTGTGCCTTCTATAATAAA+CGG | 0.440743 | 6_3:-15484822 | Msa0941640:CDS |
| GACAAAATAATGAACTTTGT+AGG | 0.443796 | 6_3:+15480142 | None:intergenic |
| TGCAAGGCGCGTTTCAATCA+AGG | 0.445253 | 6_3:-15482835 | Msa0941640:intron |
| GAAATTGCCATTATCGGCTT+GGG | 0.450627 | 6_3:-15482455 | Msa0941640:CDS |
| TGAAATCATGTGGACCAGTT+AGG | 0.453290 | 6_3:-15484758 | Msa0941640:intron |
| AAGTAGGTAGTGATGACATC+TGG | 0.455533 | 6_3:+15481429 | None:intergenic |
| GTACTGTCTGGAGTGTTGTA+TGG | 0.456107 | 6_3:-15484215 | Msa0941640:CDS |
| TCACTCTCCTAAGTGCTGAT+AGG | 0.457763 | 6_3:+15482859 | None:intergenic |
| AGTGCACAAAATGAAATTGC+CGG | 0.460087 | 6_3:+15480303 | None:intergenic |
| GGCTCAGACAGAACATGTAT+TGG | 0.460360 | 6_3:-15482919 | Msa0941640:CDS |
| CGAAATTCTGATTTATCGAA+TGG | 0.460587 | 6_3:-15481470 | Msa0941640:CDS |
| GGCTGTTTGGATGCATCAAA+TGG | 0.464507 | 6_3:-15480378 | Msa0941640:three_prime_UTR |
| ATCAATATTCATCATGATCC+TGG | 0.466038 | 6_3:-15480037 | Msa0941640:three_prime_UTR |
| TGCAAAAGCCTTGGAAGGGA+AGG | 0.470282 | 6_3:-15484976 | Msa0941640:CDS |
| TATCTTGTCTTGTGGGGAAA+GGG | 0.474981 | 6_3:-15484783 | Msa0941640:CDS |
| GCTCAGACAGAACATGTATT+GGG | 0.477325 | 6_3:-15482918 | Msa0941640:CDS |
| TCCCTAATGAACGGATCAAT+CGG | 0.478019 | 6_3:+15480184 | None:intergenic |
| ATCACGTCCCACATGGCAAT+GGG | 0.491857 | 6_3:+15482654 | None:intergenic |
| GATGTCCCCTAATCACTTGT+CGG | 0.492309 | 6_3:-15487052 | Msa0941640:CDS |
| AATTAAGTTTACCTGTGTGT+TGG | 0.493679 | 6_3:+15484946 | None:intergenic |
| GAAAGTGGCCTTCCCTTCCA+AGG | 0.498059 | 6_3:+15484968 | None:intergenic |
| AGCACTGTATCTTGTCTTGT+GGG | 0.503801 | 6_3:-15484790 | Msa0941640:CDS |
| GTATCTTGTCTTGTGGGGAA+AGG | 0.504843 | 6_3:-15484784 | Msa0941640:CDS |
| TACTGTCTGGAGTGTTGTAT+GGG | 0.505086 | 6_3:-15484214 | Msa0941640:CDS |
| GATCACCTTCTGAAAGCAAT+GGG | 0.509932 | 6_3:-15482477 | Msa0941640:CDS |
| CTGCGATAAGTAGCGAAACA+TGG | 0.511588 | 6_3:+15485066 | None:intergenic |
| GTTCTCCTCCTCATCATGTC+AGG | 0.524066 | 6_3:-15487020 | Msa0941640:intron |
| TATGTTTCCCATTGCCATGT+GGG | 0.533391 | 6_3:-15482661 | Msa0941640:CDS |
| TGAACTTTGTAGGCTAAAAG+TGG | 0.534897 | 6_3:+15480152 | None:intergenic |
| CTGGTATCCTATCAGCACTT+AGG | 0.535619 | 6_3:-15482866 | Msa0941640:CDS |
| GGATCACCTTCTGAAAGCAA+TGG | 0.536493 | 6_3:-15482478 | Msa0941640:CDS |
| GATCACGTCCCACATGGCAA+TGG | 0.538393 | 6_3:+15482653 | None:intergenic |
| CACTTAGGAGAGTGATTGCA+AGG | 0.540870 | 6_3:-15482851 | Msa0941640:CDS |
| AATTTCCCATTGCTTTCAGA+AGG | 0.541298 | 6_3:+15482472 | None:intergenic |
| CTAGCCGCCATCAAATGCCT+TGG | 0.549495 | 6_3:+15481756 | None:intergenic |
| GCTGTCCTTGGAGTACTGTC+TGG | 0.553280 | 6_3:-15484227 | Msa0941640:CDS |
| AGATTTAAAGAACTGCTACC+AGG | 0.553505 | 6_3:+15480019 | None:intergenic |
| ATGAGTTACACTTTGATCAC+CGG | 0.555896 | 6_3:-15480322 | Msa0941640:three_prime_UTR |
| TTTGTTTACCTGACATGATG+AGG | 0.556292 | 6_3:+15487012 | None:intergenic |
| TTTACCTGTGTGTTGGAAAG+TGG | 0.556345 | 6_3:+15484953 | None:intergenic |
| ATGTTGCTGCAAATTTCTTG+AGG | 0.565945 | 6_3:-15485105 | Msa0941640:CDS |
| CAGCACTGTATCTTGTCTTG+TGG | 0.568320 | 6_3:-15484791 | Msa0941640:CDS |
| CATGGAGATTGTGTACAAGA+TGG | 0.568714 | 6_3:-15481718 | Msa0941640:CDS |
| CACTATGATCACGTCCCACA+TGG | 0.575063 | 6_3:+15482647 | None:intergenic |
| CAGAAGCAATAGTTAAAGCA+TGG | 0.580452 | 6_3:+15482694 | None:intergenic |
| TTTCGCTACTTATCGCAGAC+CGG | 0.590701 | 6_3:-15485061 | Msa0941640:CDS |
| AGAGTATACGCACTTCAAGT+AGG | 0.595816 | 6_3:+15481413 | None:intergenic |
| CGCCATCAAATGCCTTGGTG+AGG | 0.603288 | 6_3:+15481761 | None:intergenic |
| TAGTGCATGCATCATTGTCA+TGG | 0.615491 | 6_3:-15481736 | Msa0941640:CDS |
| GTTTACCTGACATGATGAGG+AGG | 0.616127 | 6_3:+15487015 | None:intergenic |
| TGTAACTCATGATATAGCAA+AGG | 0.618788 | 6_3:+15480335 | None:intergenic |
| GATTGATCCGTTCATTAGGG+AGG | 0.635788 | 6_3:-15480182 | Msa0941640:three_prime_UTR |
| CTATGCTGATAGTATTGCAG+AGG | 0.637176 | 6_3:-15482392 | Msa0941640:CDS |
| GCAACATGAATTATCTGCAA+CGG | 0.638722 | 6_3:+15485121 | None:intergenic |
| TTATGTTTCCCATTGCCATG+TGG | 0.645168 | 6_3:-15482662 | Msa0941640:CDS |
| CTGATAGTATTGCAGAGGAG+AGG | 0.647048 | 6_3:-15482387 | Msa0941640:intron |
| GTTTCATCTCTATCTTCCCG+CGG | 0.647364 | 6_3:+15482945 | None:intergenic |
| GGAAAGGGACTGAAATCATG+TGG | 0.653102 | 6_3:-15484768 | Msa0941640:CDS |
| AGTTCAACCTCCCTAATGAA+CGG | 0.658335 | 6_3:+15480175 | None:intergenic |
| ATGGGAGGCGAAGCAATCTG+TGG | 0.659174 | 6_3:-15484196 | Msa0941640:CDS |
| ACTTAACTAGAATATACCGC+GGG | 0.661571 | 6_3:-15482961 | Msa0941640:intron |
| TCGAAAATACATCATTGTCG+TGG | 0.661604 | 6_3:+15480257 | None:intergenic |
| ATCATCCGACAAGTGATTAG+GGG | 0.661855 | 6_3:+15487047 | None:intergenic |
| GCACTGTATCTTGTCTTGTG+GGG | 0.667397 | 6_3:-15484789 | Msa0941640:CDS |
| TGTCTGGAGTGTTGTATGGG+AGG | 0.672175 | 6_3:-15484211 | Msa0941640:CDS |
| AATCACTTGTCGGATGATCG+AGG | 0.672183 | 6_3:-15487042 | Msa0941640:CDS |
| CTCACCAAGGCATTTGATGG+CGG | 0.673584 | 6_3:-15481760 | Msa0941640:CDS |
| GGAAGATAGAGATGAAACTG+AGG | 0.684758 | 6_3:-15482940 | Msa0941640:CDS |
| ACACTCCAGACAGTACTCCA+AGG | 0.689003 | 6_3:+15484222 | None:intergenic |
| AACTTAACTAGAATATACCG+CGG | 0.697520 | 6_3:-15482962 | Msa0941640:intron |
| AAGGCCACTTTCCAACACAC+AGG | 0.708330 | 6_3:-15484957 | Msa0941640:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAGGTTAAATTTAAATT+CGG | - | chr6_3:15485193-15485212 | Msa0941640:intron | 10.0% |
| !!! | TCTATCATTTAAAATAAAAT+AGG | + | chr6_3:15485890-15485909 | None:intergenic | 10.0% |
| !! | AATTTAGCTATTATAAATTC+TGG | - | chr6_3:15480165-15480184 | Msa0941640:three_prime_UTR | 15.0% |
| !! | ATTTAGCTATTATAAATTCT+GGG | - | chr6_3:15480166-15480185 | Msa0941640:three_prime_UTR | 15.0% |
| !!! | TTTTTTTCTCAAATTATTAG+AGG | - | chr6_3:15480547-15480566 | Msa0941640:intron | 15.0% |
| !! | AAAATAAATAAATGAAACAG+TGG | + | chr6_3:15480952-15480971 | None:intergenic | 15.0% |
| !! | TATTTAACTCATTAATCTAT+AGG | + | chr6_3:15481635-15481654 | None:intergenic | 15.0% |
| !!! | TTTAATGATTTTTGTTTTCT+TGG | - | chr6_3:15481771-15481790 | Msa0941640:CDS | 15.0% |
| !! | AAAAAAATTGGTATTAGTTA+AGG | + | chr6_3:15482273-15482292 | None:intergenic | 15.0% |
| !! | ATATAGTACAATCAATTTAA+GGG | + | chr6_3:15482977-15482996 | None:intergenic | 15.0% |
| !! | TATATAGTACAATCAATTTA+AGG | + | chr6_3:15482978-15482997 | None:intergenic | 15.0% |
| !!! | TTGTAGAAAAACATAATTTT+TGG | + | chr6_3:15483077-15483096 | None:intergenic | 15.0% |
| !!! | TCATTCTTTTATCAAAAAAA+TGG | + | chr6_3:15483594-15483613 | None:intergenic | 15.0% |
| !! | ATAAAAACAAAGTAAACAAT+TGG | + | chr6_3:15485766-15485785 | None:intergenic | 15.0% |
| !! | AAAAAATGAAACAAACAAAA+AGG | + | chr6_3:15485867-15485886 | None:intergenic | 15.0% |
| !! | AAAATTACTTAAAGGAAATT+TGG | + | chr6_3:15485925-15485944 | None:intergenic | 15.0% |
| !!! | TTTTACGAAAAATTACTTAA+AGG | + | chr6_3:15485933-15485952 | None:intergenic | 15.0% |
| !!! | AATTAACATTTTTCAATTTC+AGG | - | chr6_3:15486497-15486516 | Msa0941640:intron | 15.0% |
| !!! | ATTAACATTTTTCAATTTCA+GGG | - | chr6_3:15486498-15486517 | Msa0941640:intron | 15.0% |
| !!! | TTTTGAAATGTTGTTAATAT+AGG | - | chr6_3:15486525-15486544 | Msa0941640:intron | 15.0% |
| !!! | TTTGAAATGTTGTTAATATA+GGG | - | chr6_3:15486526-15486545 | Msa0941640:intron | 15.0% |
| !!! | TTTTGGTAATAATATTCTGA+AGG | - | chr6_3:15480282-15480301 | Msa0941640:three_prime_UTR | 20.0% |
| !! | AACACCTATCATAAAAAATA+TGG | - | chr6_3:15481454-15481473 | Msa0941640:CDS | 20.0% |
| !! | TCTTTCTTAATAATTCTTCT+AGG | + | chr6_3:15481612-15481631 | None:intergenic | 20.0% |
| !! | TAATCAATCACTAATCATTA+TGG | + | chr6_3:15481866-15481885 | None:intergenic | 20.0% |
| !!! | AGAATCTAAAATTTATTCCT+TGG | + | chr6_3:15482222-15482241 | None:intergenic | 20.0% |
| !!! | ATACCAATTTTTTTCTTTAC+AGG | - | chr6_3:15482279-15482298 | Msa0941640:intron | 20.0% |
| !! | ATAAAACCGTTTATTATAGA+AGG | + | chr6_3:15482310-15482329 | None:intergenic | 20.0% |
| !! | TTATTAATTCAGAGCAATAT+TGG | - | chr6_3:15482859-15482878 | Msa0941640:CDS | 20.0% |
| !! | TATTAATTCAGAGCAATATT+GGG | - | chr6_3:15482860-15482879 | Msa0941640:CDS | 20.0% |
| !!! | TTGTAGAAAAACCTAATTTT+TGG | + | chr6_3:15483034-15483053 | None:intergenic | 20.0% |
| !!! | CTACAAATTTTCTATTGAAT+TGG | - | chr6_3:15483048-15483067 | Msa0941640:intron | 20.0% |
| !! | AACTAAAGAAACAATGTAAT+TGG | + | chr6_3:15483221-15483240 | None:intergenic | 20.0% |
| !! | TGTTTCTTATTGTATTTGTT+TGG | - | chr6_3:15483247-15483266 | Msa0941640:intron | 20.0% |
| !!! | CTTATATAGTCTTGTTATTT+TGG | + | chr6_3:15483974-15483993 | None:intergenic | 20.0% |
| !! | ATATCAAAATGTTTCCAAAT+AGG | + | chr6_3:15484710-15484729 | None:intergenic | 20.0% |
| !! | TACGATATTTAGTACAAAAT+TGG | - | chr6_3:15484912-15484931 | Msa0941640:intron | 20.0% |
| !! | AACTCGTAATAAATATGATA+TGG | + | chr6_3:15485060-15485079 | None:intergenic | 20.0% |
| !! | ATTTAAATTCGGATTTGATA+TGG | - | chr6_3:15485204-15485223 | Msa0941640:intron | 20.0% |
| !! | TTTAATGATTCAATAGGATA+GGG | - | chr6_3:15485818-15485837 | Msa0941640:intron | 20.0% |
| !!! | TTTTAATTTTTTTTGGACAC+TGG | + | chr6_3:15486015-15486034 | None:intergenic | 20.0% |
| !!! | TAACTAGCTTTATTTTATAC+AGG | - | chr6_3:15486090-15486109 | Msa0941640:intron | 20.0% |
| !!! | AACTAGCTTTATTTTATACA+GGG | - | chr6_3:15486091-15486110 | Msa0941640:intron | 20.0% |
| !! | AAATATTTGTCGAAATAATG+TGG | + | chr6_3:15486166-15486185 | None:intergenic | 20.0% |
| !! | TGATATTGTTATCTTCAAAA+TGG | + | chr6_3:15486205-15486224 | None:intergenic | 20.0% |
| !! | TTTCTCGTTATATACTAATT+TGG | - | chr6_3:15486261-15486280 | Msa0941640:intron | 20.0% |
| !!! | TTATATACTAATTTGGTGAA+TGG | - | chr6_3:15486268-15486287 | Msa0941640:intron | 20.0% |
| !!! | ACTCTTTAATTTGACTATTT+GGG | - | chr6_3:15486356-15486375 | Msa0941640:intron | 20.0% |
| !! | TTGAAATGTTGTTAATATAG+GGG | - | chr6_3:15486527-15486546 | Msa0941640:intron | 20.0% |
| !!! | TATTTTTGAAGGCAAATAAT+CGG | + | chr6_3:15486603-15486622 | None:intergenic | 20.0% |
| !! | AATATTGAATGTCAAATAGT+TGG | - | chr6_3:15487157-15487176 | Msa0941640:five_prime_UTR | 20.0% |
| ! | GTTTGTTTCAATATTGAGTA+TGG | - | chr6_3:15480314-15480333 | Msa0941640:three_prime_UTR | 25.0% |
| ! | TTTCAATATTGAGTATGGTA+AGG | - | chr6_3:15480319-15480338 | Msa0941640:three_prime_UTR | 25.0% |
| ! | TTCAGTGTAATTATATGTGT+CGG | + | chr6_3:15480516-15480535 | None:intergenic | 25.0% |
| ! | GACAATATTACTATGAAACA+CGG | + | chr6_3:15480626-15480645 | None:intergenic | 25.0% |
| ! | TGTTTCATAGTAATATTGTC+TGG | - | chr6_3:15480626-15480645 | Msa0941640:intron | 25.0% |
| ! | TGAATATCTGAATGTAAATG+TGG | + | chr6_3:15481079-15481098 | None:intergenic | 25.0% |
| ! | TTTCATAGCTCTTATCTATT+TGG | - | chr6_3:15481198-15481217 | Msa0941640:intron | 25.0% |
| ! | TCTTATCTATTTGGTTAGTA+GGG | - | chr6_3:15481207-15481226 | Msa0941640:intron | 25.0% |
| ! | ATTCAAGAACATTCATATCA+CGG | - | chr6_3:15481300-15481319 | Msa0941640:intron | 25.0% |
| ! | ACCTATCATAAAAAATATGG+TGG | - | chr6_3:15481457-15481476 | Msa0941640:CDS | 25.0% |
| !!! | TCCACCATATTTTTTATGAT+AGG | + | chr6_3:15481461-15481480 | None:intergenic | 25.0% |
| !! | TAAAAAATATGGTGGAAACT+CGG | - | chr6_3:15481465-15481484 | Msa0941640:CDS | 25.0% |
| !! | GTCTTTCTTAATAGTTTTCT+AGG | + | chr6_3:15481590-15481609 | None:intergenic | 25.0% |
| ! | CTACAAATGTCTCATAATAT+AGG | + | chr6_3:15481889-15481908 | None:intergenic | 25.0% |
| ! | CAACCTGTAAAGAAAAAAAT+TGG | + | chr6_3:15482285-15482304 | None:intergenic | 25.0% |
| !! | AACTGTTTTCATAACTATCT+TGG | - | chr6_3:15482511-15482530 | Msa0941640:intron | 25.0% |
| ! | AAATACAAACATGATCAAGA+AGG | + | chr6_3:15482765-15482784 | None:intergenic | 25.0% |
| ! | TCATGTTTGTATTTATTGAC+TGG | - | chr6_3:15482771-15482790 | Msa0941640:intron | 25.0% |
| ! | AGAAAAACCAAATCTTCATA+AGG | + | chr6_3:15483177-15483196 | None:intergenic | 25.0% |
| !! | TTTTTCTTTATCCTCTCTTT+AGG | - | chr6_3:15483190-15483209 | Msa0941640:intron | 25.0% |
| !! | TTTTCTTTATCCTCTCTTTA+GGG | - | chr6_3:15483191-15483210 | Msa0941640:intron | 25.0% |
| ! | CGATATATCATAGTAAAACA+TGG | + | chr6_3:15483634-15483653 | None:intergenic | 25.0% |
| !! | GTTTTACTATGATATATCGA+TGG | - | chr6_3:15483635-15483654 | Msa0941640:intron | 25.0% |
| !!! | TTCTTATTTTTGAACCAGAT+AGG | - | chr6_3:15483731-15483750 | Msa0941640:intron | 25.0% |
| ! | AAACTACACAAACAACAAAA+AGG | + | chr6_3:15484106-15484125 | None:intergenic | 25.0% |
| ! | AGTTAAGTTTACAACACTTT+CGG | + | chr6_3:15484150-15484169 | None:intergenic | 25.0% |
| ! | ATGTTAATTCCTATTATTGC+TGG | - | chr6_3:15484238-15484257 | Msa0941640:CDS | 25.0% |
| !! | GTTTTCAGAATCAACTTAAA+AGG | - | chr6_3:15484401-15484420 | Msa0941640:intron | 25.0% |
| !!! | TTTTAGGTCTAAATTAAGAC+AGG | - | chr6_3:15484521-15484540 | Msa0941640:intron | 25.0% |
| ! | TTTAGGTCTAAATTAAGACA+GGG | - | chr6_3:15484522-15484541 | Msa0941640:intron | 25.0% |
| !! | GTTTAATTGTTATGTGGTTT+TGG | - | chr6_3:15484562-15484581 | Msa0941640:intron | 25.0% |
| !!! | AGAAAGTTGTTTTTGCATTT+TGG | - | chr6_3:15484809-15484828 | Msa0941640:CDS | 25.0% |
| ! | CACTCTTGTGTAAAAAAAAT+TGG | - | chr6_3:15484867-15484886 | Msa0941640:intron | 25.0% |
| ! | TTGTACTAAATATCGTATCA+CGG | + | chr6_3:15484909-15484928 | None:intergenic | 25.0% |
| ! | TCTTATGCTCATTAGATTAT+TGG | - | chr6_3:15485026-15485045 | Msa0941640:CDS | 25.0% |
| ! | AACATTCTCTTCATTCTTAT+TGG | - | chr6_3:15485093-15485112 | Msa0941640:CDS | 25.0% |
| ! | CTTCATTCTTATTGGAAAAT+TGG | - | chr6_3:15485101-15485120 | Msa0941640:CDS | 25.0% |
| !!! | TCTTATTGGAAAATTGGTTT+TGG | - | chr6_3:15485107-15485126 | Msa0941640:CDS | 25.0% |
| ! | GAAAGATGTTTGGTTATAAA+AGG | - | chr6_3:15485177-15485196 | Msa0941640:intron | 25.0% |
| ! | ATAAGATAATGCATGAGATT+TGG | - | chr6_3:15485266-15485285 | Msa0941640:intron | 25.0% |
| ! | ATGTTAAATGTTCTTTGCAA+TGG | - | chr6_3:15485573-15485592 | Msa0941640:intron | 25.0% |
| ! | CTTCTGTTTAATGATTCAAT+AGG | - | chr6_3:15485812-15485831 | Msa0941640:intron | 25.0% |
| ! | GTTTAATGATTCAATAGGAT+AGG | - | chr6_3:15485817-15485836 | Msa0941640:intron | 25.0% |
| ! | CCTAACATCTATCATTATAA+GGG | + | chr6_3:15486066-15486085 | None:intergenic | 25.0% |
| ! | TCCTAACATCTATCATTATA+AGG | + | chr6_3:15486067-15486086 | None:intergenic | 25.0% |
| !!! | ACTAGCTTTATTTTATACAG+GGG | - | chr6_3:15486092-15486111 | Msa0941640:intron | 25.0% |
| ! | AATATCTTTAGACGAAGATA+CGG | + | chr6_3:15486228-15486247 | None:intergenic | 25.0% |
| !!! | CACTCTTTAATTTGACTATT+TGG | - | chr6_3:15486355-15486374 | Msa0941640:intron | 25.0% |
| ! | AATTTGGTACCTAAAATTGT+AGG | - | chr6_3:15486390-15486409 | Msa0941640:intron | 25.0% |
| !!! | TGTTGGTATTGATAATCTAA+GGG | + | chr6_3:15486432-15486451 | None:intergenic | 25.0% |
| !!! | ATGTTGGTATTGATAATCTA+AGG | + | chr6_3:15486433-15486452 | None:intergenic | 25.0% |
| ! | GAACTATAATGACATTATGT+TGG | + | chr6_3:15486449-15486468 | None:intergenic | 25.0% |
| !!! | ATTTTTGAAGGCAAATAATC+GGG | + | chr6_3:15486602-15486621 | None:intergenic | 25.0% |
| ! | TTGCCTTCAAAAATATTTAG+AGG | - | chr6_3:15486608-15486627 | Msa0941640:intron | 25.0% |
| ! | TGCCTTCAAAAATATTTAGA+GGG | - | chr6_3:15486609-15486628 | Msa0941640:intron | 25.0% |
| ! | TCTCTAAACATTAGGATTTA+GGG | + | chr6_3:15486649-15486668 | None:intergenic | 25.0% |
| ! | TTCTCTAAACATTAGGATTT+AGG | + | chr6_3:15486650-15486669 | None:intergenic | 25.0% |
| !!! | AAGTTTGTTTGTCTACTTTT+TGG | - | chr6_3:15486720-15486739 | Msa0941640:intron | 25.0% |
| ! | GACAAAATAATGAACTTTGT+AGG | + | chr6_3:15486984-15487003 | None:intergenic | 25.0% |
| !!! | TTCATTATTTTGTCTTGTAC+AGG | - | chr6_3:15486990-15487009 | Msa0941640:intron | 25.0% |
| GCTATTATAAATTCTGGGTA+TGG | - | chr6_3:15480171-15480190 | Msa0941640:three_prime_UTR | 30.0% | |
| TATGGTTCATTATTGGGTAT+TGG | - | chr6_3:15480189-15480208 | Msa0941640:three_prime_UTR | 30.0% | |
| !! | GATTTTGAAAGATCTATGAG+TGG | - | chr6_3:15480259-15480278 | Msa0941640:three_prime_UTR | 30.0% |
| CATCAACTAACTAAACCATA+AGG | + | chr6_3:15480379-15480398 | None:intergenic | 30.0% | |
| CTTATTGTGACAATAAAGCA+CGG | - | chr6_3:15480444-15480463 | Msa0941640:intron | 30.0% | |
| ! | TCTCAAATTATTAGAGGTGT+TGG | - | chr6_3:15480553-15480572 | Msa0941640:intron | 30.0% |
| TAATCACTGCTTAATGACAT+CGG | - | chr6_3:15480790-15480809 | Msa0941640:intron | 30.0% | |
| TTATTCAGCTGTTTAAGAAC+TGG | - | chr6_3:15480919-15480938 | Msa0941640:intron | 30.0% | |
| TATTCAGCTGTTTAAGAACT+GGG | - | chr6_3:15480920-15480939 | Msa0941640:intron | 30.0% | |
| TTTCAAGCAATATTTACTCG+TGG | - | chr6_3:15480982-15481001 | Msa0941640:intron | 30.0% | |
| ! | GGATTAAATTCTAGTTGTGT+TGG | - | chr6_3:15481036-15481055 | Msa0941640:intron | 30.0% |
| GTGACAACAATTTAAGAAAG+TGG | + | chr6_3:15481109-15481128 | None:intergenic | 30.0% | |
| CTCTTATCTATTTGGTTAGT+AGG | - | chr6_3:15481206-15481225 | Msa0941640:intron | 30.0% | |
| CAGAAATGATTATGTTGTGT+TGG | - | chr6_3:15481370-15481389 | Msa0941640:intron | 30.0% | |
| !!! | AAAAGCATTAGAGAGAGTTT+TGG | - | chr6_3:15481429-15481448 | Msa0941640:CDS | 30.0% |
| !! | AAAGCATTAGAGAGAGTTTT+GGG | - | chr6_3:15481430-15481449 | Msa0941640:CDS | 30.0% |
| GACTTGTAGATTCTATAGTA+AGG | - | chr6_3:15481516-15481535 | Msa0941640:CDS | 30.0% | |
| TTGTAGATTCTATAGTAAGG+AGG | - | chr6_3:15481519-15481538 | Msa0941640:CDS | 30.0% | |
| TGTAGATTCTATAGTAAGGA+GGG | - | chr6_3:15481520-15481539 | Msa0941640:CDS | 30.0% | |
| ATGACATAACATTACAGTGT+TGG | - | chr6_3:15481667-15481686 | Msa0941640:intron | 30.0% | |
| TTGGTTGTTGTAAATGCTTT+CGG | - | chr6_3:15481728-15481747 | Msa0941640:CDS | 30.0% | |
| GTGTATGTCTATAAAGAGAA+GGG | + | chr6_3:15481983-15482002 | None:intergenic | 30.0% | |
| ! | GCTTTTGCAAAATCAAAAAC+AGG | + | chr6_3:15482136-15482155 | None:intergenic | 30.0% |
| !!! | TTTTGATTTTGCAAAAGCCT+TGG | - | chr6_3:15482138-15482157 | Msa0941640:intron | 30.0% |
| AATTAAGTTTACCTGTGTGT+TGG | + | chr6_3:15482180-15482199 | None:intergenic | 30.0% | |
| GTTGTGCCTTCTATAATAAA+CGG | - | chr6_3:15482301-15482320 | Msa0941640:intron | 30.0% | |
| AGAACTTGACACATTTAAGT+TGG | + | chr6_3:15482424-15482443 | None:intergenic | 30.0% | |
| !! | TTTTGAGTGATACGATATTG+TGG | - | chr6_3:15482653-15482672 | Msa0941640:CDS | 30.0% |
| TCAATTGGAGTATGAAAAAC+TGG | + | chr6_3:15482709-15482728 | None:intergenic | 30.0% | |
| GATGACATCAATGATTCAAT+TGG | + | chr6_3:15482724-15482743 | None:intergenic | 30.0% | |
| AAGAAGGAGCAATATAATGA+TGG | + | chr6_3:15482749-15482768 | None:intergenic | 30.0% | |
| AATTGGAGTATACAGTTTCA+GGG | + | chr6_3:15483001-15483020 | None:intergenic | 30.0% | |
| ACTGTATACTCCAATTGAAT+TGG | - | chr6_3:15483005-15483024 | Msa0941640:intron | 30.0% | |
| !!! | TTTTTGGAGTCCAATTCAAT+TGG | + | chr6_3:15483018-15483037 | None:intergenic | 30.0% |
| TGAATTGGACTCCAAAAATT+AGG | - | chr6_3:15483020-15483039 | Msa0941640:intron | 30.0% | |
| TCGATACAAATAAAGAAGAG+AGG | + | chr6_3:15483107-15483126 | None:intergenic | 30.0% | |
| TTCCGTTAGAGAAAAAACTA+GGG | + | chr6_3:15483529-15483548 | None:intergenic | 30.0% | |
| TTTCCGTTAGAGAAAAAACT+AGG | + | chr6_3:15483530-15483549 | None:intergenic | 30.0% | |
| GATGTGTTTGAAAGAAGTTT+AGG | - | chr6_3:15483684-15483703 | Msa0941640:intron | 30.0% | |
| !!! | TTATTTTTGAACCAGATAGG+TGG | - | chr6_3:15483734-15483753 | Msa0941640:intron | 30.0% |
| ! | TAATTTCAAGTGGTTTAAGG+TGG | + | chr6_3:15483930-15483949 | None:intergenic | 30.0% |
| ! | GTCTAATTTCAAGTGGTTTA+AGG | + | chr6_3:15483933-15483952 | None:intergenic | 30.0% |
| GACTATATAAGTCTGTTTCA+AGG | - | chr6_3:15483983-15484002 | Msa0941640:intron | 30.0% | |
| AACTTAACTAGAATATACCG+CGG | - | chr6_3:15484161-15484180 | Msa0941640:intron | 30.0% | |
| TGTAGTTATTATTCTCTCCT+TGG | - | chr6_3:15484330-15484349 | Msa0941640:intron | 30.0% | |
| CGGAATGTTTAATTGTTATG+TGG | - | chr6_3:15484556-15484575 | Msa0941640:intron | 30.0% | |
| GGTTCATAATTGTAAAACAG+TGG | - | chr6_3:15484838-15484857 | Msa0941640:intron | 30.0% | |
| GTACAAAATTGGTCAAATTG+TGG | - | chr6_3:15484923-15484942 | Msa0941640:intron | 30.0% | |
| AATCCATAGTTGTTAACACT+GGG | - | chr6_3:15485001-15485020 | Msa0941640:CDS | 30.0% | |
| GTCATACAAATTGTTTGACA+AGG | + | chr6_3:15485143-15485162 | None:intergenic | 30.0% | |
| TGCAATGTATGAAAGATGTT+TGG | - | chr6_3:15485167-15485186 | Msa0941640:intron | 30.0% | |
| ! | GTGATTTGCAGCTTAATATT+AGG | - | chr6_3:15485448-15485467 | Msa0941640:intron | 30.0% |
| TGCAGCTTAATATTAGGTTT+AGG | - | chr6_3:15485454-15485473 | Msa0941640:intron | 30.0% | |
| TCTTTGCAATGGAATTATGT+AGG | - | chr6_3:15485584-15485603 | Msa0941640:intron | 30.0% | |
| CTTTGCAATGGAATTATGTA+GGG | - | chr6_3:15485585-15485604 | Msa0941640:intron | 30.0% | |
| CGAAATTCTGATTTATCGAA+TGG | - | chr6_3:15485653-15485672 | Msa0941640:intron | 30.0% | |
| AATCATTAAACAGAAGCTCA+AGG | + | chr6_3:15485808-15485827 | None:intergenic | 30.0% | |
| CCCTTATAATGATAGATGTT+AGG | - | chr6_3:15486063-15486082 | Msa0941640:intron | 30.0% | |
| GAATAAACTCGGTCATAATT+TGG | - | chr6_3:15486118-15486137 | Msa0941640:intron | 30.0% | |
| !! | AATTTGGTTCTCTGTTGATT+AGG | - | chr6_3:15486134-15486153 | Msa0941640:intron | 30.0% |
| !! | ATTTGGTTCTCTGTTGATTA+GGG | - | chr6_3:15486135-15486154 | Msa0941640:intron | 30.0% |
| TATTTCGACAAATATTTCCG+TGG | - | chr6_3:15486169-15486188 | Msa0941640:intron | 30.0% | |
| !! | ATTTTGGTCCATGAAATTGT+GGG | + | chr6_3:15486569-15486588 | None:intergenic | 30.0% |
| !! | AATTTTGGTCCATGAAATTG+TGG | + | chr6_3:15486570-15486589 | None:intergenic | 30.0% |
| !! | AGCCCTCTAAATATTTTTGA+AGG | + | chr6_3:15486614-15486633 | None:intergenic | 30.0% |
| ATCCTAATGTTTAGAGAATG+TGG | - | chr6_3:15486652-15486671 | Msa0941640:intron | 30.0% | |
| ATCCACATTCTCTAAACATT+AGG | + | chr6_3:15486657-15486676 | None:intergenic | 30.0% | |
| GGATGGTTGTTTATATTTGA+AGG | - | chr6_3:15486691-15486710 | Msa0941640:intron | 30.0% | |
| TGTAACTCATGATATAGCAA+AGG | + | chr6_3:15486791-15486810 | None:intergenic | 30.0% | |
| !!! | GTTGATAACAATTTTGCAAC+TGG | + | chr6_3:15486908-15486927 | None:intergenic | 30.0% |
| ATCAATATTCATCATGATCC+TGG | - | chr6_3:15487086-15487105 | Msa0941640:five_prime_UTR | 30.0% | |
| TTTGTTTACCTGACATGATG+AGG | + | chr6_3:15480114-15480133 | None:intergenic | 35.0% | |
| TTCTGGGTATGGTTCATTAT+TGG | - | chr6_3:15480182-15480201 | Msa0941640:three_prime_UTR | 35.0% | |
| TCTGGGTATGGTTCATTATT+GGG | - | chr6_3:15480183-15480202 | Msa0941640:three_prime_UTR | 35.0% | |
| !! | TGGGTATTGGTTCAAATTGA+AGG | - | chr6_3:15480202-15480221 | Msa0941640:three_prime_UTR | 35.0% |
| ! | GAAAGATCTATGAGTGGTTT+TGG | - | chr6_3:15480265-15480284 | Msa0941640:three_prime_UTR | 35.0% |
| ! | GCTTTAAGCTGAAATCCTTA+TGG | - | chr6_3:15480361-15480380 | Msa0941640:three_prime_UTR | 35.0% |
| ATTACTATGAAACACGGACA+CGG | + | chr6_3:15480620-15480639 | None:intergenic | 35.0% | |
| GATACTTACTATCTACAACG+TGG | - | chr6_3:15480812-15480831 | Msa0941640:intron | 35.0% | |
| CATTGGCACATTTCAAATGA+TGG | + | chr6_3:15480880-15480899 | None:intergenic | 35.0% | |
| TTGAAATGTGCCAATGCTTT+AGG | - | chr6_3:15480884-15480903 | Msa0941640:intron | 35.0% | |
| TGGTTAGTAGGGAAATTTGA+AGG | - | chr6_3:15481218-15481237 | Msa0941640:intron | 35.0% | |
| ATTATGTTGTGTTGGATGTG+TGG | - | chr6_3:15481378-15481397 | Msa0941640:intron | 35.0% | |
| TTATGAGACATTTGTAGACG+AGG | - | chr6_3:15481892-15481911 | Msa0941640:intron | 35.0% | |
| TATGAGACATTTGTAGACGA+GGG | - | chr6_3:15481893-15481912 | Msa0941640:intron | 35.0% | |
| GGTGTATGTCTATAAAGAGA+AGG | + | chr6_3:15481984-15482003 | None:intergenic | 35.0% | |
| GCAACATGAATTATCTGCAA+CGG | + | chr6_3:15482005-15482024 | None:intergenic | 35.0% | |
| ATGTTGCTGCAAATTTCTTG+AGG | - | chr6_3:15482018-15482037 | Msa0941640:intron | 35.0% | |
| CTGCAAATTTCTTGAGGATA+TGG | - | chr6_3:15482024-15482043 | Msa0941640:intron | 35.0% | |
| AAAAAGAACAACTGAAGCTC+CGG | + | chr6_3:15482084-15482103 | None:intergenic | 35.0% | |
| ! | TCTTTTTCTTTTTGCCTGTC+TGG | - | chr6_3:15482097-15482116 | Msa0941640:intron | 35.0% |
| ! | ATTTTGCAAAAGCCTTGGAA+GGG | - | chr6_3:15482143-15482162 | Msa0941640:intron | 35.0% |
| !! | TCAAGTTCTGAAAGTCTGTT+TGG | - | chr6_3:15482435-15482454 | Msa0941640:CDS | 35.0% |
| AAGCACTTGTGAGACTATTT+GGG | + | chr6_3:15482577-15482596 | None:intergenic | 35.0% | |
| TAGTTAGACTAGAGTTTGTC+TGG | + | chr6_3:15482624-15482643 | None:intergenic | 35.0% | |
| AAGGAGCAATATAATGATGG+TGG | + | chr6_3:15482746-15482765 | None:intergenic | 35.0% | |
| CAATTGGAGTATACAGTTTC+AGG | + | chr6_3:15483002-15483021 | None:intergenic | 35.0% | |
| AAGGCATGGTAAAACAATTC+AGG | + | chr6_3:15483158-15483177 | None:intergenic | 35.0% | |
| TACCATGCCTTATGAAGATT+TGG | - | chr6_3:15483167-15483186 | Msa0941640:intron | 35.0% | |
| AACCAAATCTTCATAAGGCA+TGG | + | chr6_3:15483172-15483191 | None:intergenic | 35.0% | |
| AATTGGATTACCCTAAAGAG+AGG | + | chr6_3:15483204-15483223 | None:intergenic | 35.0% | |
| TATCCAAACAGTCTTAGTCT+TGG | - | chr6_3:15483479-15483498 | Msa0941640:intron | 35.0% | |
| !!! | CTTAGTCTTGGTTGTTTTAG+AGG | - | chr6_3:15483491-15483510 | Msa0941640:intron | 35.0% |
| TTAGAGAAAAAACTAGGGGA+TGG | + | chr6_3:15483524-15483543 | None:intergenic | 35.0% | |
| !!! | TCCCCTAGTTTTTTCTCTAA+CGG | - | chr6_3:15483524-15483543 | Msa0941640:intron | 35.0% |
| TCCGTTAGAGAAAAAACTAG+GGG | + | chr6_3:15483528-15483547 | None:intergenic | 35.0% | |
| ! | GTTTAGGATCTTCTCTAATC+TGG | - | chr6_3:15483700-15483719 | Msa0941640:intron | 35.0% |
| ! | TCATTTTACCTGCTATCTGA+AGG | - | chr6_3:15483776-15483795 | Msa0941640:intron | 35.0% |
| AATCGAACCAATCATCAATC+CGG | - | chr6_3:15483877-15483896 | Msa0941640:intron | 35.0% | |
| CAGTTTCGTCTAATTTCAAG+TGG | + | chr6_3:15483940-15483959 | None:intergenic | 35.0% | |
| CTTGAAATTAGACGAAACTG+CGG | - | chr6_3:15483940-15483959 | Msa0941640:intron | 35.0% | |
| AGTCTGTTTCAAGGTTCAAT+TGG | - | chr6_3:15483992-15484011 | Msa0941640:intron | 35.0% | |
| !!! | AGAGTTTTAACTACCGAACA+GGG | + | chr6_3:15484026-15484045 | None:intergenic | 35.0% |
| ACTTAACTAGAATATACCGC+GGG | - | chr6_3:15484162-15484181 | Msa0941640:intron | 35.0% | |
| GATAGGATACCAGCAATAAT+AGG | + | chr6_3:15484250-15484269 | None:intergenic | 35.0% | |
| TCTGAAAACGAAAGATGTTC+CGG | + | chr6_3:15484390-15484409 | None:intergenic | 35.0% | |
| CAGAAGCAATAGTTAAAGCA+TGG | + | chr6_3:15484432-15484451 | None:intergenic | 35.0% | |
| TAGACCTAAAATCCAAAGCA+CGG | + | chr6_3:15484512-15484531 | None:intergenic | 35.0% | |
| AATTTCCCATTGCTTTCAGA+AGG | + | chr6_3:15484654-15484673 | None:intergenic | 35.0% | |
| CAATGGGAAATTGCCATTAT+CGG | - | chr6_3:15484662-15484681 | Msa0941640:intron | 35.0% | |
| TTCTTGAGCACTATCCTATT+TGG | - | chr6_3:15484693-15484712 | Msa0941640:intron | 35.0% | |
| CTCACGTAACAGTTACATAT+GGG | + | chr6_3:15484785-15484804 | None:intergenic | 35.0% | |
| ACTCACGTAACAGTTACATA+TGG | + | chr6_3:15484786-15484805 | None:intergenic | 35.0% | |
| !!! | GTTTTTGCATTTTGGCTACT+AGG | - | chr6_3:15484817-15484836 | Msa0941640:CDS | 35.0% |
| ! | CTATGGATTGCAGAAAATAC+TGG | + | chr6_3:15484990-15485009 | None:intergenic | 35.0% |
| CAATCCATAGTTGTTAACAC+TGG | - | chr6_3:15485000-15485019 | Msa0941640:CDS | 35.0% | |
| GCTCATTAGATTATTGGAAG+AGG | - | chr6_3:15485032-15485051 | Msa0941640:CDS | 35.0% | |
| CGGATTTGATATGGAAAACT+CGG | - | chr6_3:15485213-15485232 | Msa0941640:intron | 35.0% | |
| ! | TGGTGATTGAAAACACGTTT+TGG | - | chr6_3:15485286-15485305 | Msa0941640:intron | 35.0% |
| ! | TTTTCGTTGTAGATTGCACA+TGG | - | chr6_3:15485333-15485352 | Msa0941640:intron | 35.0% |
| ! | AAAGGAAATTTGGTGACTAG+TGG | + | chr6_3:15485915-15485934 | None:intergenic | 35.0% |
| !! | AAAATGGACTAACTAGACCA+CGG | + | chr6_3:15486189-15486208 | None:intergenic | 35.0% |
| !!! | TGACAATTGTGTTTTTCGAG+AGG | - | chr6_3:15486291-15486310 | Msa0941640:intron | 35.0% |
| !! | TTTTCGAGAGGCAATTTTTG+TGG | - | chr6_3:15486303-15486322 | Msa0941640:intron | 35.0% |
| TTGGGAGTGAATACTCAATT+TGG | - | chr6_3:15486374-15486393 | Msa0941640:intron | 35.0% | |
| ! | TGACACAGTCCTACAATTTT+AGG | + | chr6_3:15486402-15486421 | None:intergenic | 35.0% |
| ATAGTTCCTGCAAATACGAA+CGG | - | chr6_3:15486462-15486481 | Msa0941640:intron | 35.0% | |
| TGTTGTTAATATAGGGGACT+TGG | - | chr6_3:15486533-15486552 | Msa0941640:intron | 35.0% | |
| ! | TTTTGGTCCATGAAATTGTG+GGG | + | chr6_3:15486568-15486587 | None:intergenic | 35.0% |
| ! | ATCGGGTTACTACTCAATTT+TGG | + | chr6_3:15486585-15486604 | None:intergenic | 35.0% |
| TGTGGATATGTTACTAATGC+TGG | - | chr6_3:15486670-15486689 | Msa0941640:intron | 35.0% | |
| GATATGTTACTAATGCTGGA+TGG | - | chr6_3:15486674-15486693 | Msa0941640:intron | 35.0% | |
| !!! | TTGTTTGTCTACTTTTTGGC+AGG | - | chr6_3:15486724-15486743 | Msa0941640:intron | 35.0% |
| ATGAGTTACACTTTGATCAC+CGG | - | chr6_3:15486801-15486820 | Msa0941640:intron | 35.0% | |
| AGTGCACAAAATGAAATTGC+CGG | + | chr6_3:15486823-15486842 | None:intergenic | 35.0% | |
| TCGAAAATACATCATTGTCG+TGG | + | chr6_3:15486869-15486888 | None:intergenic | 35.0% | |
| TGAACTTTGTAGGCTAAAAG+TGG | + | chr6_3:15486974-15486993 | None:intergenic | 35.0% | |
| AGATTTAAAGAACTGCTACC+AGG | + | chr6_3:15487107-15487126 | None:intergenic | 35.0% | |
| TCACTCTCTTTGTCTCACTT+TGG | - | chr6_3:15480029-15480048 | Msa0941640:three_prime_UTR | 40.0% | |
| ATCATCCGACAAGTGATTAG+GGG | + | chr6_3:15480079-15480098 | None:intergenic | 40.0% | |
| GATCATCCGACAAGTGATTA+GGG | + | chr6_3:15480080-15480099 | None:intergenic | 40.0% | |
| CATTAGGCATGTTCTAGTGT+CGG | - | chr6_3:15480477-15480496 | Msa0941640:intron | 40.0% | |
| TCGATTTCAGCCTAAAGCAT+TGG | + | chr6_3:15480897-15480916 | None:intergenic | 40.0% | |
| ! | ATTCTAGTTGTGTTGGACAC+CGG | - | chr6_3:15481043-15481062 | Msa0941640:intron | 40.0% |
| GAATGTAAATGTGGCAGTGT+CGG | + | chr6_3:15481070-15481089 | None:intergenic | 40.0% | |
| AGACTAGACGAGATAGGATT+AGG | - | chr6_3:15481403-15481422 | Msa0941640:intron | 40.0% | |
| ! | ATATGGTGGAAACTCGGATT+AGG | - | chr6_3:15481471-15481490 | Msa0941640:CDS | 40.0% |
| ! | AAACTCGGATTAGGTGGTTT+GGG | - | chr6_3:15481480-15481499 | Msa0941640:CDS | 40.0% |
| ! | GATTTTGCAAAAGCCTTGGA+AGG | - | chr6_3:15482142-15482161 | Msa0941640:intron | 40.0% |
| TTTACCTGTGTGTTGGAAAG+TGG | + | chr6_3:15482173-15482192 | None:intergenic | 40.0% | |
| TACTTCAGCAGAGAATACCA+AGG | - | chr6_3:15482202-15482221 | Msa0941640:intron | 40.0% | |
| AGCACTGTATCTTGTCTTGT+GGG | - | chr6_3:15482333-15482352 | Msa0941640:intron | 40.0% | |
| TATCTTGTCTTGTGGGGAAA+GGG | - | chr6_3:15482340-15482359 | Msa0941640:intron | 40.0% | |
| TGAAATCATGTGGACCAGTT+AGG | - | chr6_3:15482365-15482384 | Msa0941640:intron | 40.0% | |
| GCATACAAAACCAACCTAAC+TGG | + | chr6_3:15482382-15482401 | None:intergenic | 40.0% | |
| AGACTATTTGGGAGAGCTTA+TGG | + | chr6_3:15482566-15482585 | None:intergenic | 40.0% | |
| CAAGCACTTGTGAGACTATT+TGG | + | chr6_3:15482578-15482597 | None:intergenic | 40.0% | |
| TGTTCTACATGACTGCACAT+CGG | + | chr6_3:15482679-15482698 | None:intergenic | 40.0% | |
| GCAATATTGGGTGAGTATTC+TGG | - | chr6_3:15482872-15482891 | Msa0941640:CDS | 40.0% | |
| !! | TACTGTCTGGAGTGTTGTAT+GGG | - | chr6_3:15482909-15482928 | Msa0941640:CDS | 40.0% |
| CAACCAAGACTAAGACTGTT+TGG | + | chr6_3:15483485-15483504 | None:intergenic | 40.0% | |
| !! | GATGGTGTTATGTTTCCTCT+TGG | - | chr6_3:15483653-15483672 | Msa0941640:intron | 40.0% |
| ACACATCAATCACAACCAAG+AGG | + | chr6_3:15483671-15483690 | None:intergenic | 40.0% | |
| ATGATGCACACATGGCAATT+AGG | + | chr6_3:15483760-15483779 | None:intergenic | 40.0% | |
| CAGGTAAAATGATGCACACA+TGG | + | chr6_3:15483768-15483787 | None:intergenic | 40.0% | |
| TTTACCTGCTATCTGAAGGA+TGG | - | chr6_3:15483780-15483799 | Msa0941640:intron | 40.0% | |
| TTACCTGCTATCTGAAGGAT+GGG | - | chr6_3:15483781-15483800 | Msa0941640:intron | 40.0% | |
| GAACGGAAAATATGTTGCTG+TGG | + | chr6_3:15483807-15483826 | None:intergenic | 40.0% | |
| CTGCGAGTAAGGATATAGAA+CGG | + | chr6_3:15483824-15483843 | None:intergenic | 40.0% | |
| AGAAAATAACGCTGCGAGTA+AGG | + | chr6_3:15483835-15483854 | None:intergenic | 40.0% | |
| AAATTAGACGAAACTGCGGA+TGG | - | chr6_3:15483944-15483963 | Msa0941640:intron | 40.0% | |
| !!! | CAGAGTTTTAACTACCGAAC+AGG | + | chr6_3:15484027-15484046 | None:intergenic | 40.0% |
| GGAAGATAGAGATGAAACTG+AGG | - | chr6_3:15484183-15484202 | Msa0941640:intron | 40.0% | |
| GCTCAGACAGAACATGTATT+GGG | - | chr6_3:15484205-15484224 | Msa0941640:CDS | 40.0% | |
| TTATGTTTCCCATTGCCATG+TGG | - | chr6_3:15484461-15484480 | Msa0941640:intron | 40.0% | |
| TATGTTTCCCATTGCCATGT+GGG | - | chr6_3:15484462-15484481 | Msa0941640:intron | 40.0% | |
| TAAAATCCAAAGCACGGTCA+AGG | + | chr6_3:15484506-15484525 | None:intergenic | 40.0% | |
| !! | TTGACCGTGCTTTGGATTTT+AGG | - | chr6_3:15484505-15484524 | Msa0941640:intron | 40.0% |
| AAGACAGGGTTATCGCATTA+CGG | - | chr6_3:15484536-15484555 | Msa0941640:intron | 40.0% | |
| ! | GATCACCTTCTGAAAGCAAT+GGG | - | chr6_3:15484646-15484665 | Msa0941640:intron | 40.0% |
| !! | GAAATTGCCATTATCGGCTT+GGG | - | chr6_3:15484668-15484687 | Msa0941640:intron | 40.0% |
| CTATGCTGATAGTATTGCAG+AGG | - | chr6_3:15484731-15484750 | Msa0941640:intron | 40.0% | |
| GTAACAGTTACATATGGGCA+TGG | + | chr6_3:15484780-15484799 | None:intergenic | 40.0% | |
| ATCGTATCACGGAACAATAG+AGG | + | chr6_3:15484898-15484917 | None:intergenic | 40.0% | |
| TGGTCAAATTGTGGCTATAG+CGG | - | chr6_3:15484932-15484951 | Msa0941640:intron | 40.0% | |
| AAGCCCAGTGTTAACAACTA+TGG | + | chr6_3:15485007-15485026 | None:intergenic | 40.0% | |
| TAGTGCATGCATCATTGTCA+TGG | - | chr6_3:15485387-15485406 | Msa0941640:intron | 40.0% | |
| CATGGAGATTGTGTACAAGA+TGG | - | chr6_3:15485405-15485424 | Msa0941640:intron | 40.0% | |
| !! | AAGATGGATTTTTCGCTTGC+AGG | - | chr6_3:15485421-15485440 | Msa0941640:intron | 40.0% |
| AAGTAGGTAGTGATGACATC+TGG | + | chr6_3:15485697-15485716 | None:intergenic | 40.0% | |
| AGAGTATACGCACTTCAAGT+AGG | + | chr6_3:15485713-15485732 | None:intergenic | 40.0% | |
| TACAGGGGCTTGAATAAACT+CGG | - | chr6_3:15486107-15486126 | Msa0941640:intron | 40.0% | |
| GATACATCCCCACAATTTCA+TGG | - | chr6_3:15486558-15486577 | Msa0941640:intron | 40.0% | |
| TCCCTAATGAACGGATCAAT+CGG | + | chr6_3:15486942-15486961 | None:intergenic | 40.0% | |
| AGTTCAACCTCCCTAATGAA+CGG | + | chr6_3:15486951-15486970 | None:intergenic | 40.0% | |
| GATGTCCCCTAATCACTTGT+CGG | - | chr6_3:15480071-15480090 | Msa0941640:three_prime_UTR | 45.0% | |
| CGATCATCCGACAAGTGATT+AGG | + | chr6_3:15480081-15480100 | None:intergenic | 45.0% | |
| AATCACTTGTCGGATGATCG+AGG | - | chr6_3:15480081-15480100 | Msa0941640:three_prime_UTR | 45.0% | |
| GTTTACCTGACATGATGAGG+AGG | + | chr6_3:15480111-15480130 | None:intergenic | 45.0% | |
| GTAACCTTCTGACCAACACT+TGG | - | chr6_3:15480662-15480681 | Msa0941640:intron | 45.0% | |
| TGTTTCCTGACTCTTGCGAA+TGG | - | chr6_3:15480705-15480724 | Msa0941640:intron | 45.0% | |
| TTTCTCCATTCGCAAGAGTC+AGG | + | chr6_3:15480713-15480732 | None:intergenic | 45.0% | |
| CAGTGATTAATCTTCGACGC+GGG | + | chr6_3:15480779-15480798 | None:intergenic | 45.0% | |
| GCAGTGATTAATCTTCGACG+CGG | + | chr6_3:15480780-15480799 | None:intergenic | 45.0% | |
| ! | CCAAAGTGTCAGCGATACAT+AGG | + | chr6_3:15481018-15481037 | None:intergenic | 45.0% |
| CCTATGTATCGCTGACACTT+TGG | - | chr6_3:15481015-15481034 | Msa0941640:intron | 45.0% | |
| GTGGTAAGACTAGACGAGAT+AGG | - | chr6_3:15481397-15481416 | Msa0941640:intron | 45.0% | |
| ! | GAAACTCGGATTAGGTGGTT+TGG | - | chr6_3:15481479-15481498 | Msa0941640:CDS | 45.0% |
| ! | AGGAGGGTACAACAGATAGA+TGG | - | chr6_3:15481536-15481555 | Msa0941640:intron | 45.0% |
| ! | AAGCCTTATCCCACTACGTA+GGG | + | chr6_3:15481710-15481729 | None:intergenic | 45.0% |
| CATTTGTAGACGAGGGATTC+TGG | - | chr6_3:15481900-15481919 | Msa0941640:intron | 45.0% | |
| CTGCGATAAGTAGCGAAACA+TGG | + | chr6_3:15482060-15482079 | None:intergenic | 45.0% | |
| TTTCGCTACTTATCGCAGAC+CGG | - | chr6_3:15482062-15482081 | Msa0941640:intron | 45.0% | |
| ATCAAAAACAGGATAGCCGC+AGG | + | chr6_3:15482125-15482144 | None:intergenic | 45.0% | |
| CAGCACTGTATCTTGTCTTG+TGG | - | chr6_3:15482332-15482351 | Msa0941640:intron | 45.0% | |
| GCACTGTATCTTGTCTTGTG+GGG | - | chr6_3:15482334-15482353 | Msa0941640:intron | 45.0% | |
| GTATCTTGTCTTGTGGGGAA+AGG | - | chr6_3:15482339-15482358 | Msa0941640:intron | 45.0% | |
| GGAAAGGGACTGAAATCATG+TGG | - | chr6_3:15482355-15482374 | Msa0941640:intron | 45.0% | |
| ATCATGTGGACCAGTTAGGT+TGG | - | chr6_3:15482369-15482388 | Msa0941640:intron | 45.0% | |
| !! | GTACTGTCTGGAGTGTTGTA+TGG | - | chr6_3:15482908-15482927 | Msa0941640:CDS | 45.0% |
| GCGAAGCAATCTGTGGAAAA+AGG | - | chr6_3:15482934-15482953 | Msa0941640:CDS | 45.0% | |
| GTTGAACCATGATGAAGCAG+AGG | + | chr6_3:15483908-15483927 | None:intergenic | 45.0% | |
| ! | ATTGGTTGAGTTGCCCTGTT+CGG | - | chr6_3:15484010-15484029 | Msa0941640:intron | 45.0% |
| GTTTCATCTCTATCTTCCCG+CGG | + | chr6_3:15484181-15484200 | None:intergenic | 45.0% | |
| GGCTCAGACAGAACATGTAT+TGG | - | chr6_3:15484204-15484223 | Msa0941640:CDS | 45.0% | |
| CTGGTATCCTATCAGCACTT+AGG | - | chr6_3:15484257-15484276 | Msa0941640:intron | 45.0% | |
| !! | TCACTCTCCTAAGTGCTGAT+AGG | + | chr6_3:15484267-15484286 | None:intergenic | 45.0% |
| CACTTAGGAGAGTGATTGCA+AGG | - | chr6_3:15484272-15484291 | Msa0941640:intron | 45.0% | |
| GCATAAAGCACATGAGACCA+AGG | + | chr6_3:15484350-15484369 | None:intergenic | 45.0% | |
| GCGTGCGCTTATATCTAAAC+CGG | - | chr6_3:15484368-15484387 | Msa0941640:intron | 45.0% | |
| TTTCAGAAGGTGATCCCTGA+AGG | + | chr6_3:15484641-15484660 | None:intergenic | 45.0% | |
| ! | GGATCACCTTCTGAAAGCAA+TGG | - | chr6_3:15484645-15484664 | Msa0941640:intron | 45.0% |
| ! | GGAAATTGCCATTATCGGCT+TGG | - | chr6_3:15484667-15484686 | Msa0941640:intron | 45.0% |
| AAGAAAGCCCAAGCCGATAA+TGG | + | chr6_3:15484678-15484697 | None:intergenic | 45.0% | |
| CTGATAGTATTGCAGAGGAG+AGG | - | chr6_3:15484736-15484755 | Msa0941640:intron | 45.0% | |
| ! | ACATGGTTTTCTCCTCACCA+AGG | - | chr6_3:15485350-15485369 | Msa0941640:intron | 45.0% |
| TTCCTGCAAATACGAACGGA+GGG | - | chr6_3:15486466-15486485 | Msa0941640:intron | 45.0% | |
| !!! | CTACTTTTTGGCAGGCTGTT+TGG | - | chr6_3:15486732-15486751 | Msa0941640:intron | 45.0% |
| GGCTGTTTGGATGCATCAAA+TGG | - | chr6_3:15486745-15486764 | Msa0941640:intron | 45.0% | |
| ! | TGTATTTTCGACCACTTCCG+CGG | - | chr6_3:15486878-15486897 | Msa0941640:intron | 45.0% |
| ! | ATTTTGCAACTGGAAGTCCG+CGG | + | chr6_3:15486898-15486917 | None:intergenic | 45.0% |
| ! | TGCCGATTGATCCGTTCATT+AGG | - | chr6_3:15486937-15486956 | Msa0941640:intron | 45.0% |
| GCCGATTGATCCGTTCATTA+GGG | - | chr6_3:15486938-15486957 | Msa0941640:intron | 45.0% | |
| GATTGATCCGTTCATTAGGG+AGG | - | chr6_3:15486941-15486960 | Msa0941640:intron | 45.0% | |
| !! | ATAAAATAATATAACATAAA+TGG | - | chr6_3:15485966-15485985 | Msa0941640:intron | 5.0% |
| !!! | TTTCTAATTTTAATTTTTTT+TGG | + | chr6_3:15486022-15486041 | None:intergenic | 5.0% |
| GTTCTCCTCCTCATCATGTC+AGG | - | chr6_3:15480103-15480122 | Msa0941640:three_prime_UTR | 50.0% | |
| GTCAATGTCCGTGTTGTGTC+CGG | - | chr6_3:15480579-15480598 | Msa0941640:intron | 50.0% | |
| ATGAAACACGGACACGGACA+CGG | + | chr6_3:15480614-15480633 | None:intergenic | 50.0% | |
| !! | CCAACCAAGTGTTGGTCAGA+AGG | + | chr6_3:15480669-15480688 | None:intergenic | 50.0% |
| CCTTCTGACCAACACTTGGT+TGG | - | chr6_3:15480666-15480685 | Msa0941640:intron | 50.0% | |
| CACTAGGACCAACCAAGTGT+TGG | + | chr6_3:15480677-15480696 | None:intergenic | 50.0% | |
| ! | CAACACTTGGTTGGTCCTAG+TGG | - | chr6_3:15480675-15480694 | Msa0941640:intron | 50.0% |
| ! | ACTTGGTTGGTCCTAGTGGA+CGG | - | chr6_3:15480679-15480698 | Msa0941640:intron | 50.0% |
| AGGAAACAAACCCGTCCACT+AGG | + | chr6_3:15480693-15480712 | None:intergenic | 50.0% | |
| CGAATGGAGAAAACCCTCCT+GGG | - | chr6_3:15480721-15480740 | Msa0941640:intron | 50.0% | |
| ! | TAAATGTGGCAGTGTCGGAC+CGG | + | chr6_3:15481065-15481084 | None:intergenic | 50.0% |
| ! | TGGTGGAAACTCGGATTAGG+TGG | - | chr6_3:15481474-15481493 | Msa0941640:CDS | 50.0% |
| ! | GGATTAGGTGGTTTGGGCAT+GGG | - | chr6_3:15481486-15481505 | Msa0941640:CDS | 50.0% |
| ! | GATTAGGTGGTTTGGGCATG+GGG | - | chr6_3:15481487-15481506 | Msa0941640:CDS | 50.0% |
| GATGGTAGTCAAACCGCTAG+AGG | - | chr6_3:15481554-15481573 | Msa0941640:intron | 50.0% | |
| CTTATCCCACTACGTAGGGT+CGG | + | chr6_3:15481706-15481725 | None:intergenic | 50.0% | |
| ! | CAAGCCTTATCCCACTACGT+AGG | + | chr6_3:15481711-15481730 | None:intergenic | 50.0% |
| ! | CTACGTAGTGGGATAAGGCT+TGG | - | chr6_3:15481709-15481728 | Msa0941640:CDS | 50.0% |
| TGCAAAAGCCTTGGAAGGGA+AGG | - | chr6_3:15482147-15482166 | Msa0941640:intron | 50.0% | |
| ! | AAGGCCACTTTCCAACACAC+AGG | - | chr6_3:15482166-15482185 | Msa0941640:intron | 50.0% |
| ACACTCCAGACAGTACTCCA+AGG | + | chr6_3:15482904-15482923 | None:intergenic | 50.0% | |
| !! | TGTCTGGAGTGTTGTATGGG+AGG | - | chr6_3:15482912-15482931 | Msa0941640:CDS | 50.0% |
| TGGCAATTAGGCCACCTATC+TGG | + | chr6_3:15483748-15483767 | None:intergenic | 50.0% | |
| ! | GGTCTTGCCGGATTGATGAT+TGG | + | chr6_3:15483887-15483906 | None:intergenic | 50.0% |
| TGATGAAGCAGAGGTCTTGC+CGG | + | chr6_3:15483899-15483918 | None:intergenic | 50.0% | |
| GCAAGACCTCTGCTTCATCA+TGG | - | chr6_3:15483899-15483918 | Msa0941640:intron | 50.0% | |
| TGCAAGGCGCGTTTCAATCA+AGG | - | chr6_3:15484288-15484307 | Msa0941640:intron | 50.0% | |
| ATCACGTCCCACATGGCAAT+GGG | + | chr6_3:15484472-15484491 | None:intergenic | 50.0% | |
| CACTATGATCACGTCCCACA+TGG | + | chr6_3:15484479-15484498 | None:intergenic | 50.0% | |
| TGAGTTCCTTGACCGTGCTT+TGG | - | chr6_3:15484497-15484516 | Msa0941640:intron | 50.0% | |
| TCCCTCGTTTGACTCCTTCA+GGG | - | chr6_3:15484624-15484643 | Msa0941640:intron | 50.0% | |
| TCCCTGAAGGAGTCAAACGA+GGG | + | chr6_3:15484628-15484647 | None:intergenic | 50.0% | |
| ATCCCTGAAGGAGTCAAACG+AGG | + | chr6_3:15484629-15484648 | None:intergenic | 50.0% | |
| ! | CTCCTCACCAAGGCATTTGA+TGG | - | chr6_3:15485360-15485379 | Msa0941640:intron | 50.0% |
| ! | CTCACCAAGGCATTTGATGG+CGG | - | chr6_3:15485363-15485382 | Msa0941640:intron | 50.0% |
| GTTCCTGCAAATACGAACGG+AGG | - | chr6_3:15486465-15486484 | Msa0941640:intron | 50.0% | |
| GCACGGACACTTCTCGCATT+AGG | - | chr6_3:15480461-15480480 | Msa0941640:intron | 55.0% | |
| ! | GGCATGTTCTAGTGTCGGAC+AGG | - | chr6_3:15480482-15480501 | Msa0941640:intron | 55.0% |
| CACAGACACCGGACACAACA+CGG | + | chr6_3:15480590-15480609 | None:intergenic | 55.0% | |
| ! | CTTGGTTGGTCCTAGTGGAC+GGG | - | chr6_3:15480680-15480699 | Msa0941640:intron | 55.0% |
| GCGAATGGAGAAAACCCTCC+TGG | - | chr6_3:15480720-15480739 | Msa0941640:intron | 55.0% | |
| TGGAGAAAACCCTCCTGGGA+AGG | - | chr6_3:15480725-15480744 | Msa0941640:intron | 55.0% | |
| GGAGAAAACCCTCCTGGGAA+GGG | - | chr6_3:15480726-15480745 | Msa0941640:intron | 55.0% | |
| TGAGTTCTCCCTTCCCAGGA+GGG | + | chr6_3:15480737-15480756 | None:intergenic | 55.0% | |
| AAGGTGAGTTCTCCCTTCCC+AGG | + | chr6_3:15480741-15480760 | None:intergenic | 55.0% | |
| ACTCACCTTGTGTGCCCAAC+AGG | - | chr6_3:15480752-15480771 | Msa0941640:intron | 55.0% | |
| CTCACCTTGTGTGCCCAACA+GGG | - | chr6_3:15480753-15480772 | Msa0941640:intron | 55.0% | |
| ! | CGGATTAGGTGGTTTGGGCA+TGG | - | chr6_3:15481485-15481504 | Msa0941640:CDS | 55.0% |
| AGTCAAACCGCTAGAGGCAG+AGG | - | chr6_3:15481560-15481579 | Msa0941640:intron | 55.0% | |
| AGGTCTTCCTCTGCCTCTAG+CGG | + | chr6_3:15481570-15481589 | None:intergenic | 55.0% | |
| ACTACGTAGGGTCGGCTACA+TGG | + | chr6_3:15481698-15481717 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCTACGTAG+TGG | - | chr6_3:15481697-15481716 | Msa0941640:CDS | 55.0% | |
| TGTAGCCGACCCTACGTAGT+GGG | - | chr6_3:15481698-15481717 | Msa0941640:CDS | 55.0% | |
| ! | CGACCCTACGTAGTGGGATA+AGG | - | chr6_3:15481704-15481723 | Msa0941640:CDS | 55.0% |
| !! | TTTTGCCTGTCTGGCTCCTG+CGG | - | chr6_3:15482106-15482125 | Msa0941640:intron | 55.0% |
| GAAAGTGGCCTTCCCTTCCA+AGG | + | chr6_3:15482158-15482177 | None:intergenic | 55.0% | |
| GAGTATTCTGGCGCTGTCCT+TGG | - | chr6_3:15482884-15482903 | Msa0941640:CDS | 55.0% | |
| !! | GCTGTCCTTGGAGTACTGTC+TGG | - | chr6_3:15482896-15482915 | Msa0941640:CDS | 55.0% |
| ATGGGAGGCGAAGCAATCTG+TGG | - | chr6_3:15482927-15482946 | Msa0941640:CDS | 55.0% | |
| TGGCCCATCCTTCAGATAGC+AGG | + | chr6_3:15483787-15483806 | None:intergenic | 55.0% | |
| GATCACGTCCCACATGGCAA+TGG | + | chr6_3:15484473-15484492 | None:intergenic | 55.0% | |
| GTCAAACGAGGGAGACGAAG+AGG | + | chr6_3:15484617-15484636 | None:intergenic | 55.0% | |
| CTCCCTCGTTTGACTCCTTC+AGG | - | chr6_3:15484623-15484642 | Msa0941640:intron | 55.0% | |
| CGCCATCAAATGCCTTGGTG+AGG | + | chr6_3:15485365-15485384 | None:intergenic | 55.0% | |
| CTAGCCGCCATCAAATGCCT+TGG | + | chr6_3:15485370-15485389 | None:intergenic | 55.0% | |
| GTCCCTCCGTTCGTATTTGC+AGG | + | chr6_3:15486471-15486490 | None:intergenic | 55.0% | |
| ACGGACACGGACACAGACAC+CGG | + | chr6_3:15480601-15480620 | None:intergenic | 60.0% | |
| GTGAGTTCTCCCTTCCCAGG+AGG | + | chr6_3:15480738-15480757 | None:intergenic | 60.0% | |
| CAACTGGAAGTCCGCGGAAG+TGG | + | chr6_3:15486892-15486911 | None:intergenic | 60.0% | |
| TCTTCGACGCGGGCCCTGTT+GGG | + | chr6_3:15480769-15480788 | None:intergenic | 65.0% | |
| ATCTTCGACGCGGGCCCTGT+TGG | + | chr6_3:15480770-15480789 | None:intergenic | 65.0% | |
| GATAGCCGCAGGAGCCAGAC+AGG | + | chr6_3:15482114-15482133 | None:intergenic | 65.0% | |
| CGGGCCCTGTTGGGCACACA+AGG | + | chr6_3:15480760-15480779 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 15479964 | 15487181 | 15479964 | ID=Msa0941640;Name=Msa0941640 |
| chr6_3 | mRNA | 15479964 | 15487181 | 15479964 | ID=Msa0941640-mRNA-1;Parent=Msa0941640;Name=Msa0941640-mRNA-1;_AED=0.14;_eAED=0.14;_QI=105|0.88|0.9|1|0.88|0.8|10|437|333 |
| chr6_3 | exon | 15479964 | 15480399 | 15479964 | ID=Msa0941640-mRNA-1:exon:4725;Parent=Msa0941640-mRNA-1 |
| chr6_3 | exon | 15481426 | 15481539 | 15481426 | ID=Msa0941640-mRNA-1:exon:4724;Parent=Msa0941640-mRNA-1 |
| chr6_3 | exon | 15481670 | 15481800 | 15481670 | ID=Msa0941640-mRNA-1:exon:4723;Parent=Msa0941640-mRNA-1 |
| chr6_3 | exon | 15482388 | 15482500 | 15482388 | ID=Msa0941640-mRNA-1:exon:4722;Parent=Msa0941640-mRNA-1 |
| chr6_3 | exon | 15482650 | 15482736 | 15482650 | ID=Msa0941640-mRNA-1:exon:4721;Parent=Msa0941640-mRNA-1 |
| chr6_3 | exon | 15482836 | 15482973 | 15482836 | ID=Msa0941640-mRNA-1:exon:4720;Parent=Msa0941640-mRNA-1 |
| chr6_3 | exon | 15484190 | 15484274 | 15484190 | ID=Msa0941640-mRNA-1:exon:4719;Parent=Msa0941640-mRNA-1 |
| chr6_3 | exon | 15484759 | 15484844 | 15484759 | ID=Msa0941640-mRNA-1:exon:4718;Parent=Msa0941640-mRNA-1 |
| chr6_3 | exon | 15484958 | 15485150 | 15484958 | ID=Msa0941640-mRNA-1:exon:4717;Parent=Msa0941640-mRNA-1 |
| chr6_3 | exon | 15487021 | 15487181 | 15487021 | ID=Msa0941640-mRNA-1:exon:4716;Parent=Msa0941640-mRNA-1 |
| chr6_3 | five_prime_UTR | 15487077 | 15487181 | 15487077 | ID=Msa0941640-mRNA-1:five_prime_utr;Parent=Msa0941640-mRNA-1 |
| chr6_3 | CDS | 15487021 | 15487076 | 15487021 | ID=Msa0941640-mRNA-1:cds;Parent=Msa0941640-mRNA-1 |
| chr6_3 | CDS | 15484958 | 15485150 | 15484958 | ID=Msa0941640-mRNA-1:cds;Parent=Msa0941640-mRNA-1 |
| chr6_3 | CDS | 15484759 | 15484844 | 15484759 | ID=Msa0941640-mRNA-1:cds;Parent=Msa0941640-mRNA-1 |
| chr6_3 | CDS | 15484190 | 15484274 | 15484190 | ID=Msa0941640-mRNA-1:cds;Parent=Msa0941640-mRNA-1 |
| chr6_3 | CDS | 15482836 | 15482973 | 15482836 | ID=Msa0941640-mRNA-1:cds;Parent=Msa0941640-mRNA-1 |
| chr6_3 | CDS | 15482650 | 15482736 | 15482650 | ID=Msa0941640-mRNA-1:cds;Parent=Msa0941640-mRNA-1 |
| chr6_3 | CDS | 15482388 | 15482500 | 15482388 | ID=Msa0941640-mRNA-1:cds;Parent=Msa0941640-mRNA-1 |
| chr6_3 | CDS | 15481670 | 15481800 | 15481670 | ID=Msa0941640-mRNA-1:cds;Parent=Msa0941640-mRNA-1 |
| chr6_3 | CDS | 15481427 | 15481539 | 15481427 | ID=Msa0941640-mRNA-1:cds;Parent=Msa0941640-mRNA-1 |
| chr6_3 | three_prime_UTR | 15481426 | 15481426 | 15481426 | ID=Msa0941640-mRNA-1:three_prime_utr;Parent=Msa0941640-mRNA-1 |
| chr6_3 | three_prime_UTR | 15479964 | 15480399 | 15479964 | ID=Msa0941640-mRNA-1:three_prime_utr;Parent=Msa0941640-mRNA-1 |
| Gene Sequence |
| Protein sequence |
