AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0706390

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0706390 MtrunA17_Chr8g0385701 98.842 259 3 0 1 259 1 259 0.0 530
Msa0706390 MtrunA17_Chr1g0170101 54.231 260 112 2 1 260 1 253 3.27e-96 293
Msa0706390 MtrunA17_Chr7g0273481 51.938 258 121 2 1 258 1 255 9.76e-91 280
Msa0706390 MtrunA17_Chr7g0273421 47.826 92 42 2 150 239 13 100 2.12e-21 87.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0706390 AT5G61900.3 60.227 264 104 1 1 263 1 264 2.58e-100 305
Msa0706390 AT5G61900.1 60.227 264 104 1 1 263 1 264 2.58e-100 305
Msa0706390 AT5G07300.1 57.471 261 110 1 1 260 1 261 8.90e-98 299
Msa0706390 AT5G61910.4 57.455 275 94 2 1 263 769 1032 5.78e-96 308
Msa0706390 AT1G08860.1 55.094 265 112 3 1 260 1 263 1.77e-94 290

Find 131 sgRNAs with CRISPR-Local

Find 702 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGTGCTAAATGCCAATTAA+AGG 0.164211 4_4:-79349979 Msa0706390:three_prime_UTR
TTTGCATAAAGAACCATTAT+TGG 0.170610 4_4:+79359026 None:intergenic
AGTACAGTTTGTTCCATTTC+GGG 0.198239 4_4:-79350311 Msa0706390:three_prime_UTR
CTTACTCTTTGGTATGAATT+TGG 0.198746 4_4:+79353757 None:intergenic
ACCTCTCTTGAACCTTTAAT+TGG 0.224119 4_4:+79349967 None:intergenic
CGATTTCCTACGTGGGGATT+TGG 0.249110 4_4:-79353618 Msa0706390:three_prime_UTR
GTCTGTCCGTTCAAGCCTTC+TGG 0.259870 4_4:-79349918 Msa0706390:three_prime_UTR
TTAGAAGAACAACAATTTCT+TGG 0.262270 4_4:-79357862 Msa0706390:CDS
TAGTACAGTTTGTTCCATTT+CGG 0.270483 4_4:-79350312 Msa0706390:three_prime_UTR
TTCAGTTATATTGGATTTCC+AGG 0.295865 4_4:+79349756 None:intergenic
AGCATGAGTTCTCAGCTCTT+TGG 0.328119 4_4:+79350002 None:intergenic
GGGATTTGAATTGAACTTCA+TGG 0.330327 4_4:-79354887 Msa0706390:three_prime_UTR
CTGTCAGCTGCTTTATCTTC+AGG 0.332432 4_4:-79349940 Msa0706390:three_prime_UTR
GTATCAAAAGTTGTGGAAAA+TGG 0.333423 4_4:-79357219 Msa0706390:CDS
AAGTATTCAATATACTTTCC+TGG 0.337996 4_4:-79354923 Msa0706390:three_prime_UTR
TCTTTACATGACTAGAGATT+TGG 0.338099 4_4:+79350115 None:intergenic
ACTTTCCTGGATTACTTGGC+TGG 0.341165 4_4:-79354910 Msa0706390:three_prime_UTR
GAGCTGGAGAAGCTCTATTC+TGG 0.347750 4_4:-79355123 Msa0706390:CDS
TTGCATTACATTGATCCTTC+AGG 0.350303 4_4:-79353784 Msa0706390:three_prime_UTR
ATTTCTTAAATCGATAAATT+CGG 0.351739 4_4:-79350025 Msa0706390:three_prime_UTR
TGCCGGAGGTCCACTGAATC+CGG 0.359355 4_4:-79360781 Msa0706390:CDS
AAAACAATGGAGAGAGAAAA+AGG 0.360858 4_4:-79361047 Msa0706390:five_prime_UTR
GCGTCGTTGGAAGTGTTTCC+CGG 0.363595 4_4:+79360762 None:intergenic
GATACTCAGGTGTACAGATT+TGG 0.363618 4_4:-79357371 Msa0706390:CDS
TTCATTTCATTTCAACGCTA+TGG 0.364271 4_4:-79360853 Msa0706390:exon
ATATACTTTCCTGGATTACT+TGG 0.364628 4_4:-79354914 Msa0706390:three_prime_UTR
TCCCATTGTTTCAACTTGAA+TGG 0.386734 4_4:-79353570 Msa0706390:three_prime_UTR
GTGTACAGATTTGGAATATA+GGG 0.392511 4_4:-79357362 Msa0706390:CDS
TTCTTACTGTGATTATCAAC+AGG 0.392780 4_4:+79353301 None:intergenic
TCAATGTAATGCAAAGAATC+TGG 0.395751 4_4:+79353793 None:intergenic
GCCGGTGGCCGTACGGCAAT+CGG 0.399080 4_4:-79360810 Msa0706390:CDS
TTGATCAATGTGCAAGTTCA+AGG 0.403676 4_4:-79350065 Msa0706390:three_prime_UTR
GGTGTACAGATTTGGAATAT+AGG 0.414115 4_4:-79357363 Msa0706390:CDS
TTGCACATTGATCAATGAAT+AGG 0.419106 4_4:+79350073 None:intergenic
CTACTTTGAACATCCCGAAA+TGG 0.420882 4_4:+79350298 None:intergenic
TTCCACCATTTGCTACAGAT+TGG 0.430209 4_4:+79353337 None:intergenic
ATAATGGTTCTTTATGCAAA+AGG 0.434192 4_4:-79359023 Msa0706390:CDS
ACCATTTGCTACAGATTGGC+TGG 0.436179 4_4:+79353341 None:intergenic
GCAGACATCTCTGGTGGAGC+TGG 0.441893 4_4:-79355139 Msa0706390:CDS
TGATCGAGATGTGCTCTCTA+AGG 0.450912 4_4:-79360570 Msa0706390:intron
CAGAAAACTGCAGACATCTC+TGG 0.451157 4_4:-79355148 Msa0706390:CDS
TCCATTCAAGTTGAAACAAT+GGG 0.454390 4_4:+79353569 None:intergenic
TCCCGGATTCAGTGGACCTC+CGG 0.455624 4_4:+79360779 None:intergenic
GATAGGCTTGAAAGTTCATC+TGG 0.456547 4_4:-79350355 Msa0706390:three_prime_UTR
TTTGGAGCACGACCGATTGA+TGG 0.458957 4_4:-79353600 Msa0706390:three_prime_UTR
GAAGTTATCGACGGCGTCGT+TGG 0.460192 4_4:+79360749 None:intergenic
CGATGTCGCCGGTGGCCGTA+CGG 0.467233 4_4:-79360817 Msa0706390:CDS
CTGCTTAACGTTTCTCTCGC+AGG 0.467436 4_4:-79353408 Msa0706390:three_prime_UTR
TCATTTCATTTCAACGCTAT+GGG 0.468362 4_4:-79360852 Msa0706390:exon
CTTTCCTGGATTACTTGGCT+GGG 0.475384 4_4:-79354909 Msa0706390:three_prime_UTR
CCTACAGTCTACACTGAACC+TGG 0.478538 4_4:-79349774 Msa0706390:three_prime_UTR
AGACAAGATTCTACCAGATC+TGG 0.479706 4_4:-79357466 Msa0706390:CDS
CTCCTCCTACGCCAACGATA+AGG 0.479761 4_4:+79350552 None:intergenic
GCCGATTGCCGTACGGCCAC+CGG 0.479897 4_4:+79360809 None:intergenic
TTGCAGGTAGAAGGCATTCA+AGG 0.481279 4_4:-79353456 Msa0706390:intron
TTTCCTGGATTACTTGGCTG+GGG 0.488293 4_4:-79354908 Msa0706390:three_prime_UTR
ATTGCAGCATTATTTATGAC+AGG 0.495261 4_4:+79353369 None:intergenic
ACGGCAATCGGCGGAACTGC+CGG 0.496253 4_4:-79360798 Msa0706390:CDS
ATCCTTATCGTTGGCGTAGG+AGG 0.496936 4_4:-79350554 Msa0706390:three_prime_UTR
TGTTGTTTACCAGCTTCAAA+TGG 0.499401 4_4:-79353829 Msa0706390:intron
AATGGAGCACTTGAGGAACT+TGG 0.502480 4_4:-79358996 Msa0706390:CDS
AGGAGCTGATTTCAAAGAGA+TGG 0.503459 4_4:-79350534 Msa0706390:three_prime_UTR
CCAACGATAAGGATTGATAA+TGG 0.504163 4_4:+79350563 None:intergenic
GCTGTAGAGTGATCCAATAA+TGG 0.504399 4_4:-79359039 Msa0706390:intron
TGGATGCAGACAAAGGAGAT+AGG 0.507223 4_4:-79350372 Msa0706390:three_prime_UTR
GTCCGTTCAAGCCTTCTGGT+TGG 0.509090 4_4:-79349914 Msa0706390:three_prime_UTR
TGGAGTACCTGTAAAATCAA+TGG 0.509634 4_4:+79354861 None:intergenic
GCCAGCCAATCTGTAGCAAA+TGG 0.513378 4_4:-79353342 Msa0706390:three_prime_UTR
AAGCTCTATTCTGGTGGCCA+AGG 0.515420 4_4:-79355114 Msa0706390:CDS
TTTATTAGTATCAAAAGTTG+TGG 0.517406 4_4:-79357226 Msa0706390:CDS
AAGTTGAAACAATGGGAGAC+AGG 0.519091 4_4:+79353576 None:intergenic
CCATTATCAATCCTTATCGT+TGG 0.521967 4_4:-79350563 Msa0706390:three_prime_UTR
GGCAATTATTGAGGTTGGAG+AGG 0.522341 4_4:-79353667 Msa0706390:three_prime_UTR
CGTACGGCCACCGGCGACAT+CGG 0.526840 4_4:+79360818 None:intergenic
GCCGGAGGTCCACTGAATCC+GGG 0.531146 4_4:-79360780 Msa0706390:CDS
TTCCTGGATTACTTGGCTGG+GGG 0.531776 4_4:-79354907 Msa0706390:three_prime_UTR
TTCCATTCAAGTTGAAACAA+TGG 0.534177 4_4:+79353568 None:intergenic
CTCCAACCAGAAGGCTTGAA+CGG 0.534775 4_4:+79349912 None:intergenic
AATTGCTGCTCCGATGTCGC+CGG 0.549086 4_4:-79360828 Msa0706390:CDS
CTGAGATCATGACCCACGGC+AGG 0.549342 4_4:+79355072 None:intergenic
TATGAATTTGGCCGTCCTGA+AGG 0.556160 4_4:+79353769 None:intergenic
AAAATTTGTCCACAAATAGT+CGG 0.556612 4_4:+79354950 None:intergenic
TGGGAGACAGGACCATCAAT+CGG 0.559133 4_4:+79353588 None:intergenic
GAAGTGTTTCCCGGATTCAG+TGG 0.560239 4_4:+79360771 None:intergenic
TCAATCCTTATCGTTGGCGT+AGG 0.573889 4_4:-79350557 Msa0706390:three_prime_UTR
CGATCTGAGAGAAGAGACCT+TGG 0.574746 4_4:+79360709 None:intergenic
CCAGGTTCAGTGTAGACTGT+AGG 0.578817 4_4:+79349774 None:intergenic
TGCTGCTCCGATGTCGCCGG+TGG 0.582433 4_4:-79360825 Msa0706390:CDS
AGAACAACAATTTCTTGGTG+AGG 0.589436 4_4:-79357857 Msa0706390:CDS
GACAAGCGATTTCCTACGTG+GGG 0.590517 4_4:-79353624 Msa0706390:three_prime_UTR
AAAATAAAACTCCAACCAGA+AGG 0.591296 4_4:+79349903 None:intergenic
AGATGCACTTGTTAAAGCAT+CGG 0.592040 4_4:-79350591 Msa0706390:three_prime_UTR
GCCAATTAAAGGTTCAAGAG+AGG 0.592584 4_4:-79349968 Msa0706390:three_prime_UTR
CAGTTCCGCCGATTGCCGTA+CGG 0.592626 4_4:+79360802 None:intergenic
TACATGACTAGAGATTTGGT+TGG 0.595044 4_4:+79350119 None:intergenic
AATTCAAAACTACTTCCGTC+CGG 0.595748 4_4:+79358973 None:intergenic
CTACTAGGATGGAGTTGTGA+CGG 0.599974 4_4:-79350630 Msa0706390:intron
TGTTCAACAAGTAGGAAGCA+AGG 0.601240 4_4:-79357121 Msa0706390:intron
TTCAAGTCTCGTGGCTACCA+AGG 0.609125 4_4:-79360726 Msa0706390:CDS
GAGCACTTGAGGAACTTGGC+CGG 0.609390 4_4:-79358992 Msa0706390:CDS
ACTTGAGGAACTTGGCCGGA+CGG 0.609426 4_4:-79358988 Msa0706390:CDS
AGCTGATTTCAAAGAGATGG+AGG 0.615204 4_4:-79350531 Msa0706390:three_prime_UTR
TGAATTCGTTGAATCCGACA+TGG 0.617366 4_4:-79358956 Msa0706390:CDS
CAGACAAGCGATTTCCTACG+TGG 0.619290 4_4:-79353626 Msa0706390:three_prime_UTR
CAGATCTTGGATGCAGACAA+AGG 0.620101 4_4:-79350379 Msa0706390:three_prime_UTR
GTTTCACAACGCAGACGTGA+AGG 0.620590 4_4:-79358765 Msa0706390:intron
AAAACTGCAGACATCTCTGG+TGG 0.621038 4_4:-79355145 Msa0706390:CDS
GTTTGTTTAGTAATCCATGT+CGG 0.622631 4_4:+79358942 None:intergenic
CTACAGTAGAGATGATACTC+AGG 0.624513 4_4:-79357384 Msa0706390:CDS
TGGGTCATGATCTCAGACCA+AGG 0.627893 4_4:-79355065 Msa0706390:intron
CGATAAGGATTGATAATGGT+AGG 0.628743 4_4:+79350567 None:intergenic
AGAATGATCACAATCCAACA+TGG 0.632845 4_4:-79357161 Msa0706390:CDS
GGTGGCCGTACGGCAATCGG+CGG 0.635146 4_4:-79360807 Msa0706390:CDS
TGTAATGCAAAGAATCTGGA+AGG 0.637807 4_4:+79353797 None:intergenic
CTGGAGAAGCTCTATTCTGG+TGG 0.643477 4_4:-79355120 Msa0706390:CDS
AGGCATTCAAGGAATCATGA+TGG 0.645806 4_4:-79353445 Msa0706390:three_prime_UTR
TGAAATGAAATGAAATGAGT+CGG 0.648033 4_4:+79360862 None:intergenic
GATAACTTCTTCAAGTCTCG+TGG 0.649983 4_4:-79360735 Msa0706390:CDS
AGCCAATCTGTAGCAAATGG+TGG 0.650165 4_4:-79353339 Msa0706390:three_prime_UTR
AGGTCTCTTCTCTCAGATCG+AGG 0.653280 4_4:-79360706 Msa0706390:intron
GGCAACTTGTGCATTATCTG+AGG 0.654797 4_4:-79357836 Msa0706390:intron
AGACAAGCGATTTCCTACGT+GGG 0.662700 4_4:-79353625 Msa0706390:three_prime_UTR
GCAATCGGCGGAACTGCCGG+AGG 0.665003 4_4:-79360795 Msa0706390:CDS
ATTACATTGATCCTTCAGGA+CGG 0.667479 4_4:-79353780 Msa0706390:three_prime_UTR
TGGTCTGAGATCATGACCCA+CGG 0.669862 4_4:+79355068 None:intergenic
ATTTGAATTGAACTTCATGG+TGG 0.674358 4_4:-79354884 Msa0706390:three_prime_UTR
GTGTATGCTGAGGAATGTGT+TGG 0.678518 4_4:-79357415 Msa0706390:CDS
AGACTTGAAGAAGTTATCGA+CGG 0.701794 4_4:+79360740 None:intergenic
GAAGCTCAAAGTGTATGCTG+AGG 0.705846 4_4:-79357425 Msa0706390:CDS
CGTGCTCCAAATCCCCACGT+AGG 0.721272 4_4:+79353612 None:intergenic
TGGAAGCAATACTTACTGTG+AGG 0.795076 4_4:-79353550 Msa0706390:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAATAAAAATATATTA+AGG - chr4_4:79358475-79358494 Msa0706390:intron 0.0%
!! AATAAATAAAAATATATTAA+GGG - chr4_4:79358476-79358495 Msa0706390:intron 0.0%
!!! ATTATTTTTTTGACAATTTT+TGG + chr4_4:79349824-79349843 None:intergenic 10.0%
!! TTGTTAATTAATAATGATTA+AGG - chr4_4:79350333-79350352 Msa0706390:three_prime_UTR 10.0%
!! ATTATTATTGCTAATAATTA+AGG - chr4_4:79351104-79351123 Msa0706390:intron 10.0%
!! AAAATAATTGCATTAATTTA+TGG - chr4_4:79352321-79352340 Msa0706390:intron 10.0%
!! AATACTTAAATAGAAATATT+AGG + chr4_4:79354043-79354062 None:intergenic 10.0%
!! AACAACATTATTATAAAAAT+AGG + chr4_4:79354574-79354593 None:intergenic 10.0%
!!! CATAGTTAAATATTATTTTA+GGG + chr4_4:79355812-79355831 None:intergenic 10.0%
!!! TCATAGTTAAATATTATTTT+AGG + chr4_4:79355813-79355832 None:intergenic 10.0%
!!! GTATTTTTTATTTATTAAAG+AGG - chr4_4:79356508-79356527 Msa0706390:intron 10.0%
!! TAGTATATAAATAATTCTTA+GGG + chr4_4:79358079-79358098 None:intergenic 10.0%
!! ATAATTATTATGTGAATATA+TGG - chr4_4:79359814-79359833 Msa0706390:intron 10.0%
!! AGAAATATTAAAAATGAAAA+GGG + chr4_4:79360760-79360779 None:intergenic 10.0%
!! AAGAAATATTAAAAATGAAA+AGG + chr4_4:79360761-79360780 None:intergenic 10.0%
!! ACAAGATTCTTAAAATAAAT+GGG + chr4_4:79352176-79352195 None:intergenic 15.0%
!! TACAAGATTCTTAAAATAAA+TGG + chr4_4:79352177-79352196 None:intergenic 15.0%
!! AAAAAATCTTGAACTAAAAA+AGG + chr4_4:79352488-79352507 None:intergenic 15.0%
!!! ATCATAGAATATGATTTTTT+TGG - chr4_4:79352630-79352649 Msa0706390:intron 15.0%
!!! CTTAAAATTTTATTTCCTAA+TGG - chr4_4:79352731-79352750 Msa0706390:intron 15.0%
!! AGAAAAACAATAATAATGAA+TGG + chr4_4:79353079-79353098 None:intergenic 15.0%
!!! TTTTCAGTTTTTAGAATATT+AGG - chr4_4:79353127-79353146 Msa0706390:intron 15.0%
!!! TATATTTTCAGTAAAACATA+GGG + chr4_4:79353212-79353231 None:intergenic 15.0%
!!! ATATATTTTCAGTAAAACAT+AGG + chr4_4:79353213-79353232 None:intergenic 15.0%
!!! ACTTTTGATACTAATAAAAA+GGG + chr4_4:79353571-79353590 None:intergenic 15.0%
!!! AACTTTTGATACTAATAAAA+AGG + chr4_4:79353572-79353591 None:intergenic 15.0%
!!! TTTATTAATTTGATACTTCT+TGG + chr4_4:79353909-79353928 None:intergenic 15.0%
!!! ATTTTTGTTTGTTGAAATTT+AGG - chr4_4:79353945-79353964 Msa0706390:intron 15.0%
!!! TTTTTGTTTGTTGAAATTTA+GGG - chr4_4:79353946-79353965 Msa0706390:intron 15.0%
!!! TAGAAAACAAAAGAATTTTA+TGG + chr4_4:79354690-79354709 None:intergenic 15.0%
!!! TGCTAATTTTTTTAACTATT+AGG - chr4_4:79354782-79354801 Msa0706390:intron 15.0%
!!! GCTAATTTTTTTAACTATTA+GGG - chr4_4:79354783-79354802 Msa0706390:intron 15.0%
!! AATTTAATATAACAAAACCT+TGG + chr4_4:79355754-79355773 None:intergenic 15.0%
!! ATAATATTTAACTATGACAA+AGG - chr4_4:79355816-79355835 Msa0706390:intron 15.0%
!!! AGTTTTAACTTTTTAAGTTT+AGG - chr4_4:79356101-79356120 Msa0706390:intron 15.0%
!! ACAATACATATTTAAATCTA+TGG + chr4_4:79356159-79356178 None:intergenic 15.0%
!! TAGATTTAAATATGTATTGT+AGG - chr4_4:79356159-79356178 Msa0706390:intron 15.0%
!! CATAATGATATAAACTAAAA+AGG + chr4_4:79356253-79356272 None:intergenic 15.0%
!! AATTATATCATTTCATAATC+CGG + chr4_4:79356848-79356867 None:intergenic 15.0%
!! AGAACTTAAAATTCATTATA+TGG + chr4_4:79357757-79357776 None:intergenic 15.0%
!! AATACAAGTATAATTTCAAA+AGG + chr4_4:79357824-79357843 None:intergenic 15.0%
!! TTATTCTTCAAAATTTACTA+TGG + chr4_4:79357894-79357913 None:intergenic 15.0%
!! TGTATATTATAACATAATAG+GGG + chr4_4:79357978-79357997 None:intergenic 15.0%
!! GTGTATATTATAACATAATA+GGG + chr4_4:79357979-79357998 None:intergenic 15.0%
!! AGTGTATATTATAACATAAT+AGG + chr4_4:79357980-79357999 None:intergenic 15.0%
!!! TTTTAGGTTTTTATTTTCAA+GGG + chr4_4:79358008-79358027 None:intergenic 15.0%
!!! ATTTTAGGTTTTTATTTTCA+AGG + chr4_4:79358009-79358028 None:intergenic 15.0%
!! AGTATATAAATAATTCTTAG+GGG + chr4_4:79358078-79358097 None:intergenic 15.0%
!! GTAGTATATAAATAATTCTT+AGG + chr4_4:79358080-79358099 None:intergenic 15.0%
!! AAATAAAAATATATTAAGGG+AGG - chr4_4:79358479-79358498 Msa0706390:intron 15.0%
!! AATAAAAATATATTAAGGGA+GGG - chr4_4:79358480-79358499 Msa0706390:intron 15.0%
!! ATTATATAAGTAGAATTAGA+AGG - chr4_4:79358778-79358797 Msa0706390:CDS 15.0%
!!! ATATTCTAAAGAAAATTGTA+TGG - chr4_4:79359673-79359692 Msa0706390:intron 15.0%
!! ATTCAAAATTAGATGTTATA+AGG - chr4_4:79359773-79359792 Msa0706390:intron 15.0%
!! TTCAAAATTAGATGTTATAA+GGG - chr4_4:79359774-79359793 Msa0706390:intron 15.0%
!! ATTTCTTAAATCGATAAATT+CGG - chr4_4:79360774-79360793 Msa0706390:CDS 15.0%
!!! AAAAAAGTATTCAGTTATAT+TGG + chr4_4:79361055-79361074 None:intergenic 15.0%
!!! AAAATTGATTGAAGTAGTTT+TGG + chr4_4:79350156-79350175 None:intergenic 20.0%
!! TTGATTAATTTAATGTACAC+AGG + chr4_4:79350382-79350401 None:intergenic 20.0%
!! TTGAAAAAGAAATTTGTACT+TGG - chr4_4:79350791-79350810 Msa0706390:intron 20.0%
!! TGAAAAAGAAATTTGTACTT+GGG - chr4_4:79350792-79350811 Msa0706390:intron 20.0%
!! AAATTAATTGCATTGCATTA+TGG + chr4_4:79351201-79351220 None:intergenic 20.0%
!!! TCTTTTTCTGAATAAAAAGA+TGG + chr4_4:79351434-79351453 None:intergenic 20.0%
!! CAGTATAAACAAATTACAAA+GGG + chr4_4:79351655-79351674 None:intergenic 20.0%
!! AAGCATAACATTTCATTTAA+AGG + chr4_4:79351686-79351705 None:intergenic 20.0%
!!! ATGAAATGTTATGCTTTTAA+TGG - chr4_4:79351690-79351709 Msa0706390:intron 20.0%
!! AGAAATATACATCAAAAACT+TGG + chr4_4:79352085-79352104 None:intergenic 20.0%
!!! GTTCAAGATTTTTTTTAATG+AGG - chr4_4:79352494-79352513 Msa0706390:intron 20.0%
!!! ATAAAATTTTAAGTGCAGTT+GGG + chr4_4:79352724-79352743 None:intergenic 20.0%
!!! AATAAAATTTTAAGTGCAGT+TGG + chr4_4:79352725-79352744 None:intergenic 20.0%
!! CAAGATATTAATTTACTATG+TGG - chr4_4:79352817-79352836 Msa0706390:intron 20.0%
!! AAGTTCAAATTGTAACTATT+TGG - chr4_4:79352892-79352911 Msa0706390:intron 20.0%
!! TTATTTAGTTGTCTAATATC+AGG + chr4_4:79353018-79353037 None:intergenic 20.0%
!! TTTATTAGTATCAAAAGTTG+TGG - chr4_4:79353573-79353592 Msa0706390:three_prime_UTR 20.0%
!!! AGAATACCATGTTAATTTTT+AGG - chr4_4:79354379-79354398 Msa0706390:intron 20.0%
!!! CATGTTAATTTTTAGGAAAT+GGG - chr4_4:79354386-79354405 Msa0706390:intron 20.0%
!!! GCCATATTTTATGTAAAATT+TGG - chr4_4:79354604-79354623 Msa0706390:intron 20.0%
!!! GCCAAATTTTACATAAAATA+TGG + chr4_4:79354608-79354627 None:intergenic 20.0%
!!! CAACTTTTATTTAAGTTATG+AGG - chr4_4:79354909-79354928 Msa0706390:three_prime_UTR 20.0%
!! AACTTATAATGAAAATGTGT+TGG - chr4_4:79355101-79355120 Msa0706390:CDS 20.0%
!! GGCTTATTAAAAAAAAATGT+TGG - chr4_4:79355200-79355219 Msa0706390:intron 20.0%
!! GACAATCATAGAATATAATT+AGG + chr4_4:79355985-79356004 None:intergenic 20.0%
!! TAACTAATAAATTGGATGAT+GGG + chr4_4:79356600-79356619 None:intergenic 20.0%
!! ACATTATAGTTTATAAGACA+TGG - chr4_4:79356873-79356892 Msa0706390:intron 20.0%
!! AAAAATCATTTCTTACTCTT+TGG + chr4_4:79357056-79357075 None:intergenic 20.0%
!!! ATATTTTTAGGCAATTATTG+AGG - chr4_4:79357123-79357142 Msa0706390:CDS 20.0%
!! TTATTTCAATATAGCAACAA+AGG + chr4_4:79357298-79357317 None:intergenic 20.0%
!! CATCGTATAAATTAAATGAA+GGG + chr4_4:79357793-79357812 None:intergenic 20.0%
!! TCATCGTATAAATTAAATGA+AGG + chr4_4:79357794-79357813 None:intergenic 20.0%
!!! TTTCAATACCCATATTTTAA+TGG - chr4_4:79358265-79358284 Msa0706390:intron 20.0%
!! CACTAAAACCATTAAAATAT+GGG + chr4_4:79358276-79358295 None:intergenic 20.0%
!! TCACTAAAACCATTAAAATA+TGG + chr4_4:79358277-79358296 None:intergenic 20.0%
!!! GTTACATGACTATTTTATTT+AGG - chr4_4:79358822-79358841 Msa0706390:intron 20.0%
!! TATATTGTATTTGGATGTAA+GGG + chr4_4:79358998-79359017 None:intergenic 20.0%
!! ATATATTGTATTTGGATGTA+AGG + chr4_4:79358999-79359018 None:intergenic 20.0%
!! GTTGCAAAATATATTGTATT+TGG + chr4_4:79359007-79359026 None:intergenic 20.0%
!! ACAAAATAATTAGTGAACAT+GGG + chr4_4:79359176-79359195 None:intergenic 20.0%
!! AACAAAATAATTAGTGAACA+TGG + chr4_4:79359177-79359196 None:intergenic 20.0%
!! TTACTAACAATTATCTCAAT+AGG - chr4_4:79359426-79359445 Msa0706390:intron 20.0%
!!! TTTCTTTAGAATATCTTAAG+AGG + chr4_4:79359667-79359686 None:intergenic 20.0%
!! TCTTAACTCAAAGTTATAAT+TGG - chr4_4:79360319-79360338 Msa0706390:intron 20.0%
! TTCTTATTGGTCAAAAACAA+TGG - chr4_4:79349739-79349758 Msa0706390:three_prime_UTR 25.0%
! TGAAATGAAATGAAATGAGT+CGG + chr4_4:79349940-79349959 None:intergenic 25.0%
! TTTGAAAGAGAAATATCTGA+AGG - chr4_4:79350537-79350556 Msa0706390:three_prime_UTR 25.0%
!!! TTTTTTATCTGGATTTTCTG+TGG + chr4_4:79351167-79351186 None:intergenic 25.0%
! TTTGCTCCAAATTAATGAAT+TGG + chr4_4:79351404-79351423 None:intergenic 25.0%
! AGATTTACAGCTAACAAAAT+TGG - chr4_4:79351451-79351470 Msa0706390:intron 25.0%
! CCAGTATAAACAAATTACAA+AGG + chr4_4:79351656-79351675 None:intergenic 25.0%
!!! CCTTTGTAATTTGTTTATAC+TGG - chr4_4:79351653-79351672 Msa0706390:intron 25.0%
! TTTGCATAAAGAACCATTAT+TGG + chr4_4:79351776-79351795 None:intergenic 25.0%
! ATAATGGTTCTTTATGCAAA+AGG - chr4_4:79351776-79351795 Msa0706390:intron 25.0%
! CTTTATGCAAAAGGAAAAAA+TGG - chr4_4:79351785-79351804 Msa0706390:intron 25.0%
!! AACTCTCATTTATCATTTTG+AGG - chr4_4:79351877-79351896 Msa0706390:intron 25.0%
!! TCTTTTTATCATTACCTGTT+AGG - chr4_4:79352260-79352279 Msa0706390:intron 25.0%
!! CTTTTTATCATTACCTGTTA+GGG - chr4_4:79352261-79352280 Msa0706390:intron 25.0%
!! TTTTTATCATTACCTGTTAG+GGG - chr4_4:79352262-79352281 Msa0706390:intron 25.0%
! GATACTATCATATTATCACA+TGG - chr4_4:79352367-79352386 Msa0706390:intron 25.0%
! TTAGAAGAACAACAATTTCT+TGG - chr4_4:79352937-79352956 Msa0706390:intron 25.0%
! AAAATTTACTACACTCTCAA+TGG - chr4_4:79353037-79353056 Msa0706390:intron 25.0%
!!! TTATTGTTTTTCTCTGTCAA+TGG - chr4_4:79353086-79353105 Msa0706390:intron 25.0%
!! TTTTTGAATGTTCAACAAGT+AGG - chr4_4:79353670-79353689 Msa0706390:intron 25.0%
! CAATCATAATTTATAACGAC+TGG - chr4_4:79353741-79353760 Msa0706390:intron 25.0%
! TACAGGTTATTAATGTTGTT+TGG + chr4_4:79353846-79353865 None:intergenic 25.0%
!! AGATTTAGAATGAGATATAG+CGG - chr4_4:79353882-79353901 Msa0706390:intron 25.0%
! TATAGAATACTGTTATTGTC+TGG + chr4_4:79354079-79354098 None:intergenic 25.0%
! CAATTTATTCTTCAATCTCA+AGG + chr4_4:79354286-79354305 None:intergenic 25.0%
! CTTGAGATTGAAGAATAAAT+TGG - chr4_4:79354284-79354303 Msa0706390:intron 25.0%
! AGGAGACTATTAAAACAAAA+TGG - chr4_4:79354324-79354343 Msa0706390:intron 25.0%
! CCATTTCCTAAAAATTAACA+TGG + chr4_4:79354388-79354407 None:intergenic 25.0%
!!! CCATGTTAATTTTTAGGAAA+TGG - chr4_4:79354385-79354404 Msa0706390:intron 25.0%
! CACTAACCTAATAATATGTT+AGG - chr4_4:79354473-79354492 Msa0706390:intron 25.0%
! ACTAGACCTAACATATTATT+AGG + chr4_4:79354482-79354501 None:intergenic 25.0%
! GTTAAAAAAATTAGCATAGC+TGG + chr4_4:79354778-79354797 None:intergenic 25.0%
! AACTATTAGGGATTTATGAA+TGG - chr4_4:79354795-79354814 Msa0706390:intron 25.0%
!! ATTTAAGTTATGAGGTTGAA+AGG - chr4_4:79354917-79354936 Msa0706390:three_prime_UTR 25.0%
! ATTTATTGTTACCCTAACTA+TGG - chr4_4:79355371-79355390 Msa0706390:intron 25.0%
!! ATCACTTTATCTTCTTGTTT+GGG - chr4_4:79355415-79355434 Msa0706390:intron 25.0%
! ACTTTATGATGAAGACATAT+CGG - chr4_4:79355450-79355469 Msa0706390:intron 25.0%
!! ATCTCATTTTCATTACATAC+AGG - chr4_4:79355485-79355504 Msa0706390:intron 25.0%
!!! AATGGAAAACATGATTTGTT+GGG - chr4_4:79355545-79355564 Msa0706390:intron 25.0%
! AAATAGATTTAAGGGACAAA+AGG + chr4_4:79355590-79355609 None:intergenic 25.0%
! TAAAATAGGATAAACAACTC+TGG + chr4_4:79355630-79355649 None:intergenic 25.0%
! ACAAAAATAAATGTTCTCCT+TGG + chr4_4:79355705-79355724 None:intergenic 25.0%
!!! ATTATTTTAGGGAAAGATAG+AGG + chr4_4:79355801-79355820 None:intergenic 25.0%
! AAAATTTGTCCACAAATAGT+CGG + chr4_4:79355852-79355871 None:intergenic 25.0%
! AAGTATTCAATATACTTTCC+TGG - chr4_4:79355876-79355895 Msa0706390:intron 25.0%
! ATTAGGTACAACAAACTTAA+GGG + chr4_4:79355968-79355987 None:intergenic 25.0%
! AATTAGGTACAACAAACTTA+AGG + chr4_4:79355969-79355988 None:intergenic 25.0%
! ATGATTGTCATGTTTGTAAT+AGG - chr4_4:79355996-79356015 Msa0706390:intron 25.0%
!!! CGAATTCGTTTTTAGTTATT+TGG - chr4_4:79356019-79356038 Msa0706390:intron 25.0%
! AAAAACACTAGAACTTCTTA+TGG + chr4_4:79356211-79356230 None:intergenic 25.0%
!! CTCATCATAGCTAATATTTT+TGG - chr4_4:79356276-79356295 Msa0706390:intron 25.0%
!! GAAATCGTTTACTCAATTTT+TGG - chr4_4:79356331-79356350 Msa0706390:intron 25.0%
!! TCATTAACCTTTTGCATTAT+AGG - chr4_4:79356437-79356456 Msa0706390:intron 25.0%
! AACTAATCCTATAATGCAAA+AGG + chr4_4:79356447-79356466 None:intergenic 25.0%
!!! TTGCAAAATTAGTCTTTTGA+TGG - chr4_4:79356467-79356486 Msa0706390:intron 25.0%
!!! AAAATTAGTCTTTTGATGGT+AGG - chr4_4:79356471-79356490 Msa0706390:intron 25.0%
! AAGAGGATAACAATTATGTA+TGG - chr4_4:79356525-79356544 Msa0706390:intron 25.0%
! AACTAATAAATTGGATGATG+GGG + chr4_4:79356599-79356618 None:intergenic 25.0%
! CTAACTAATAAATTGGATGA+TGG + chr4_4:79356601-79356620 None:intergenic 25.0%
! AGTAAAATGTTCATACTTCT+CGG - chr4_4:79356638-79356657 Msa0706390:intron 25.0%
! ATCAGTAACAAATAAAGTAG+TGG + chr4_4:79357090-79357109 None:intergenic 25.0%
! ATTTATCTGTTAGAGTATGT+TGG - chr4_4:79357553-79357572 Msa0706390:intron 25.0%
! AATTAAATGAAGGGATTGTT+CGG + chr4_4:79357784-79357803 None:intergenic 25.0%
! TATTATAACATAATAGGGGA+GGG + chr4_4:79357974-79357993 None:intergenic 25.0%
! ATATTATAACATAATAGGGG+AGG + chr4_4:79357975-79357994 None:intergenic 25.0%
!!! AGGGGAGTATAATTTATTTT+AGG + chr4_4:79358024-79358043 None:intergenic 25.0%
! TATAAATAATTCTTAGGGGA+GGG + chr4_4:79358074-79358093 None:intergenic 25.0%
! ATATAAATAATTCTTAGGGG+AGG + chr4_4:79358075-79358094 None:intergenic 25.0%
!!! AATTGTTTTGTCTTGAATAG+TGG + chr4_4:79358157-79358176 None:intergenic 25.0%
!!! AGTGTAGATTTTAACATTAG+AGG - chr4_4:79358504-79358523 Msa0706390:intron 25.0%
!!! GTGTAGATTTTAACATTAGA+GGG - chr4_4:79358505-79358524 Msa0706390:intron 25.0%
!!! TGTAGATTTTAACATTAGAG+GGG - chr4_4:79358506-79358525 Msa0706390:intron 25.0%
! TGTAATTCAATCTTCTTTCA+AGG - chr4_4:79358537-79358556 Msa0706390:intron 25.0%
! GTAATTCAATCTTCTTTCAA+GGG - chr4_4:79358538-79358557 Msa0706390:intron 25.0%
!!! TCTAATATTTTTTGCATGAG+AGG - chr4_4:79358578-79358597 Msa0706390:intron 25.0%
!!! CTAATATTTTTTGCATGAGA+GGG - chr4_4:79358579-79358598 Msa0706390:intron 25.0%
!!! TAATATTTTTTGCATGAGAG+GGG - chr4_4:79358580-79358599 Msa0706390:intron 25.0%
!!! AGTGTATATTTTGACATAAC+AGG - chr4_4:79358608-79358627 Msa0706390:intron 25.0%
!!! GTGTATATTTTGACATAACA+GGG - chr4_4:79358609-79358628 Msa0706390:intron 25.0%
!!! TGTATATTTTGACATAACAG+GGG - chr4_4:79358610-79358629 Msa0706390:intron 25.0%
! TAATGTAATTTAAGCATCTC+CGG - chr4_4:79358637-79358656 Msa0706390:intron 25.0%
!!! ATGACTAGTAGCTTTATTTT+GGG + chr4_4:79358679-79358698 None:intergenic 25.0%
!!! AATGACTAGTAGCTTTATTT+TGG + chr4_4:79358680-79358699 None:intergenic 25.0%
! TGTATTCATATATGTATTCC+TGG + chr4_4:79358744-79358763 None:intergenic 25.0%
! CTTATCTTAGAGTAACTAAA+AGG - chr4_4:79358931-79358950 Msa0706390:CDS 25.0%
! ATATTGTATTTGGATGTAAG+GGG + chr4_4:79358997-79359016 None:intergenic 25.0%
!! TACAATATATTTTGCAACCT+AGG - chr4_4:79359009-79359028 Msa0706390:CDS 25.0%
! AAAAATGCTGAATGGAAATT+CGG - chr4_4:79359314-79359333 Msa0706390:intron 25.0%
!! AAGATATCATAAGAAGTGTA+TGG - chr4_4:79359890-79359909 Msa0706390:intron 25.0%
! ATGTTATTCAATATACTGCA+TGG - chr4_4:79359970-79359989 Msa0706390:intron 25.0%
! TGTTATTCAATATACTGCAT+GGG - chr4_4:79359971-79359990 Msa0706390:intron 25.0%
!!! GCAATTTTTTTGGAATTGTT+TGG + chr4_4:79360103-79360122 None:intergenic 25.0%
! AACTCAAAGTTATAATTGGT+TGG - chr4_4:79360323-79360342 Msa0706390:intron 25.0%
!! TAAAGTCATAATTTGCAAAC+TGG + chr4_4:79360531-79360550 None:intergenic 25.0%
! ATATACGCTAAAAATTGAGT+AGG + chr4_4:79360645-79360664 None:intergenic 25.0%
!! TTTCTTGTGTTCTTTCTTTT+TGG - chr4_4:79360916-79360935 Msa0706390:five_prime_UTR 25.0%
!!! TTCTTTCTTTTTGGTTTTTC+TGG - chr4_4:79360925-79360944 Msa0706390:five_prime_UTR 25.0%
!!! TCTTTCTTTTTGGTTTTTCT+GGG - chr4_4:79360926-79360945 Msa0706390:five_prime_UTR 25.0%
AAAACAATGGAGAGAGAAAA+AGG - chr4_4:79349752-79349771 Msa0706390:three_prime_UTR 30.0%
TTCATTTCATTTCAACGCTA+TGG - chr4_4:79349946-79349965 Msa0706390:three_prime_UTR 30.0%
TCATTTCATTTCAACGCTAT+GGG - chr4_4:79349947-79349966 Msa0706390:three_prime_UTR 30.0%
! CTATTTGACAATACTGGTTA+TGG + chr4_4:79350874-79350893 None:intergenic 30.0%
TTGTCAAATAGCAGCTATAT+TGG - chr4_4:79350883-79350902 Msa0706390:intron 30.0%
!! AAGTACAAAGTGTTGTCAAA+TGG - chr4_4:79350944-79350963 Msa0706390:intron 30.0%
!!! CCTGAATTTGCTTTTTTATC+TGG + chr4_4:79351178-79351197 None:intergenic 30.0%
CCAGATAAAAAAGCAAATTC+AGG - chr4_4:79351175-79351194 Msa0706390:intron 30.0%
AATGATAGATAATACCAGAG+AGG - chr4_4:79351308-79351327 Msa0706390:intron 30.0%
ATGATAGATAATACCAGAGA+GGG - chr4_4:79351309-79351328 Msa0706390:intron 30.0%
!!! TGTTGTTTTTACCACCTTAA+AGG - chr4_4:79351364-79351383 Msa0706390:intron 30.0%
CCAAATTAATGAATTGGATC+CGG + chr4_4:79351398-79351417 None:intergenic 30.0%
TTCCACGTAAGAAGAAAATA+TGG - chr4_4:79351518-79351537 Msa0706390:intron 30.0%
! AACCATATTTTCTTCTTACG+TGG + chr4_4:79351523-79351542 None:intergenic 30.0%
GTAAGAAGAAAATATGGTTG+TGG - chr4_4:79351524-79351543 Msa0706390:intron 30.0%
TTTGCTGAACTATGTTAACA+AGG + chr4_4:79351598-79351617 None:intergenic 30.0%
ATTCTCATTATTCAGTTGCA+TGG - chr4_4:79351717-79351736 Msa0706390:intron 30.0%
GTTTGTTTAGTAATCCATGT+CGG + chr4_4:79351860-79351879 None:intergenic 30.0%
!!! TTATCATTTTGAGGTTGTTC+AGG - chr4_4:79351886-79351905 Msa0706390:intron 30.0%
GAAATTTACAGAACAATTCC+TGG + chr4_4:79351976-79351995 None:intergenic 30.0%
CTGTAAATTTCTTTCATCAC+AGG - chr4_4:79351985-79352004 Msa0706390:intron 30.0%
!! CGATTTATGTTTTTGCATGT+CGG - chr4_4:79352421-79352440 Msa0706390:intron 30.0%
CTTACACATTCATACAGAAA+GGG + chr4_4:79352550-79352569 None:intergenic 30.0%
ACTTACACATTCATACAGAA+AGG + chr4_4:79352551-79352570 None:intergenic 30.0%
! TTATAGTGTTGCAGCATTTT+AGG - chr4_4:79352571-79352590 Msa0706390:intron 30.0%
TCATTTCCAAGTTGTTTAGT+TGG - chr4_4:79352794-79352813 Msa0706390:intron 30.0%
! TATCTGAGGTAATTTAGAGA+CGG - chr4_4:79352977-79352996 Msa0706390:intron 30.0%
!! TATTTTGAGTAAGCACTTCT+TGG + chr4_4:79353184-79353203 None:intergenic 30.0%
GGGTACTATACTATTATTGT+TGG + chr4_4:79353243-79353262 None:intergenic 30.0%
! GTGTACAGATTTGGAATATA+GGG - chr4_4:79353437-79353456 Msa0706390:three_prime_UTR 30.0%
ACAATTGATGTTCCTTCATA+AGG + chr4_4:79353514-79353533 None:intergenic 30.0%
GTATCAAAAGTTGTGGAAAA+TGG - chr4_4:79353580-79353599 Msa0706390:three_prime_UTR 30.0%
! CTGTTTTGCAAATAGGAATA+TGG + chr4_4:79353609-79353628 None:intergenic 30.0%
! ATAGCTTCTGTTTTGCAAAT+AGG + chr4_4:79353616-79353635 None:intergenic 30.0%
CATTCTAAATCTAAACAGAC+AGG + chr4_4:79353874-79353893 None:intergenic 30.0%
TTGTTGAAATTTAGGGAGTA+TGG - chr4_4:79353953-79353972 Msa0706390:intron 30.0%
GGTATGCTTAGTTGTAAATT+GGG + chr4_4:79354114-79354133 None:intergenic 30.0%
AGGTATGCTTAGTTGTAAAT+TGG + chr4_4:79354115-79354134 None:intergenic 30.0%
GAATAAATTGGACAATAACG+AGG - chr4_4:79354296-79354315 Msa0706390:intron 30.0%
! GAGGTTAGTTAGTTACTAAT+AGG - chr4_4:79354417-79354436 Msa0706390:intron 30.0%
CACTAACAATCTATTATGCT+GGG + chr4_4:79354541-79354560 None:intergenic 30.0%
! TTTTCTAAATATGCCCTCAA+TGG - chr4_4:79354703-79354722 Msa0706390:intron 30.0%
AATGCATGCTATCACTAATA+TGG - chr4_4:79355062-79355081 Msa0706390:intron 30.0%
!! ATAATGAAAATGTGTTGGCT+TGG - chr4_4:79355106-79355125 Msa0706390:CDS 30.0%
!! TAATGAAAATGTGTTGGCTT+GGG - chr4_4:79355107-79355126 Msa0706390:CDS 30.0%
AAAGTGATGAGATACAGTAA+GGG + chr4_4:79355403-79355422 None:intergenic 30.0%
TAAAGTGATGAGATACAGTA+AGG + chr4_4:79355404-79355423 None:intergenic 30.0%
CATCACTTTATCTTCTTGTT+TGG - chr4_4:79355414-79355433 Msa0706390:intron 30.0%
! TCACTTTATCTTCTTGTTTG+GGG - chr4_4:79355416-79355435 Msa0706390:intron 30.0%
!!! TCTTGTTTGGGGTAATTTTT+TGG - chr4_4:79355427-79355446 Msa0706390:intron 30.0%
! CAATGGAAAACATGATTTGT+TGG - chr4_4:79355544-79355563 Msa0706390:intron 30.0%
!! ATGGAAAACATGATTTGTTG+GGG - chr4_4:79355546-79355565 Msa0706390:intron 30.0%
! TGTCCCTTAAATCTATTTCT+TGG - chr4_4:79355592-79355611 Msa0706390:intron 30.0%
CAGCCAAGAAATAGATTTAA+GGG + chr4_4:79355598-79355617 None:intergenic 30.0%
TCAGCCAAGAAATAGATTTA+AGG + chr4_4:79355599-79355618 None:intergenic 30.0%
! CTGCAGTTTTCTGATAAAAT+AGG + chr4_4:79355644-79355663 None:intergenic 30.0%
ATTAAAAAGCCGACTATTTG+TGG - chr4_4:79355840-79355859 Msa0706390:intron 30.0%
ATATACTTTCCTGGATTACT+TGG - chr4_4:79355885-79355904 Msa0706390:intron 30.0%
ATTTGAATTGAACTTCATGG+TGG - chr4_4:79355915-79355934 Msa0706390:intron 30.0%
! ACAACAAACTTAAGGGTATA+TGG + chr4_4:79355961-79355980 None:intergenic 30.0%
TGTATAATCTGTTCTCATCT+TGG - chr4_4:79356064-79356083 Msa0706390:intron 30.0%
!!! TTTTTGGCTTTGTTATCTCT+TGG - chr4_4:79356292-79356311 Msa0706390:intron 30.0%
TTTGGAAATATTGCACTAAC+AGG - chr4_4:79356349-79356368 Msa0706390:intron 30.0%
CATCCAATTTATTAGTTAGC+TGG - chr4_4:79356602-79356621 Msa0706390:intron 30.0%
GAACCAGCTAACTAATAAAT+TGG + chr4_4:79356608-79356627 None:intergenic 30.0%
TACATTTCAATCTGTCATGA+TGG - chr4_4:79356898-79356917 Msa0706390:intron 30.0%
!!! AAGGGTGCTATACATTTTAT+TGG - chr4_4:79356937-79356956 Msa0706390:intron 30.0%
!! AGGGTGCTATACATTTTATT+GGG - chr4_4:79356938-79356957 Msa0706390:intron 30.0%
TCAATGTAATGCAAAGAATC+TGG + chr4_4:79357009-79357028 None:intergenic 30.0%
CTTACTCTTTGGTATGAATT+TGG + chr4_4:79357045-79357064 None:intergenic 30.0%
CTAAAAATATCCGTACAACA+TGG + chr4_4:79357113-79357132 None:intergenic 30.0%
! CATGTTGTACGGATATTTTT+AGG - chr4_4:79357111-79357130 Msa0706390:intron 30.0%
! TTTTAGGCAATTATTGAGGT+TGG - chr4_4:79357127-79357146 Msa0706390:CDS 30.0%
!! TCCATTCAAGTTGAAACAAT+GGG + chr4_4:79357233-79357252 None:intergenic 30.0%
!! TTCCATTCAAGTTGAAACAA+TGG + chr4_4:79357234-79357253 None:intergenic 30.0%
ATTGCAGCATTATTTATGAC+AGG + chr4_4:79357433-79357452 None:intergenic 30.0%
TTCTTACTGTGATTATCAAC+AGG + chr4_4:79357501-79357520 None:intergenic 30.0%
! TATGTTGGTTATAATTGACG+TGG - chr4_4:79357568-79357587 Msa0706390:intron 30.0%
! TGGAATTGACTCAATCTAAA+TGG + chr4_4:79357604-79357623 None:intergenic 30.0%
TTTAGATTGAGTCAATTCCA+TGG - chr4_4:79357604-79357623 Msa0706390:intron 30.0%
ACATAAGAATGATTATGCCA+TGG + chr4_4:79357624-79357643 None:intergenic 30.0%
AAAATTCATTATATGGAGCC+AGG + chr4_4:79357750-79357769 None:intergenic 30.0%
GATATGATCATATGAAGAGT+AGG + chr4_4:79357852-79357871 None:intergenic 30.0%
ATTATAACATAATAGGGGAG+GGG + chr4_4:79357973-79357992 None:intergenic 30.0%
TTGTAATCTAAGCATCTCTT+AGG + chr4_4:79358049-79358068 None:intergenic 30.0%
ATAAATAATTCTTAGGGGAG+GGG + chr4_4:79358073-79358092 None:intergenic 30.0%
!! GTAGATTTTAACATTAGAGG+GGG - chr4_4:79358507-79358526 Msa0706390:intron 30.0%
AATGTAATTTAAGCATCTCC+GGG - chr4_4:79358638-79358657 Msa0706390:intron 30.0%
! CATTTCCTTTTATTGCCATA+CGG - chr4_4:79358867-79358886 Msa0706390:intron 30.0%
TATTGTATTTGGATGTAAGG+GGG + chr4_4:79358996-79359015 None:intergenic 30.0%
GATTTAGTTGAAGTAATCCT+AGG + chr4_4:79359029-79359048 None:intergenic 30.0%
AAGACAACTACAAATAAGTG+GGG + chr4_4:79359124-79359143 None:intergenic 30.0%
GAAGACAACTACAAATAAGT+GGG + chr4_4:79359125-79359144 None:intergenic 30.0%
TATTTGTAGTTGTCTTCCTT+TGG - chr4_4:79359128-79359147 Msa0706390:intron 30.0%
CTAGTAGTTAACATTACCAA+AGG + chr4_4:79359147-79359166 None:intergenic 30.0%
GTATCTTACATAAAACGCAA+AGG + chr4_4:79359243-79359262 None:intergenic 30.0%
! CCATTCAGCATTTTTACTAT+GGG + chr4_4:79359309-79359328 None:intergenic 30.0%
! TCCATTCAGCATTTTTACTA+TGG + chr4_4:79359310-79359329 None:intergenic 30.0%
! ATATCATAAGAAGTGTATGG+AGG - chr4_4:79359893-79359912 Msa0706390:intron 30.0%
! TATCATAAGAAGTGTATGGA+GGG - chr4_4:79359894-79359913 Msa0706390:intron 30.0%
GTTATTCAATATACTGCATG+GGG - chr4_4:79359972-79359991 Msa0706390:intron 30.0%
TTGTATGCATTGTTCTAACA+TGG + chr4_4:79360060-79360079 None:intergenic 30.0%
! TAGTACAGTTTGTTCCATTT+CGG - chr4_4:79360487-79360506 Msa0706390:intron 30.0%
ACAAGAGATTGATAAGTTCA+AGG + chr4_4:79360562-79360581 None:intergenic 30.0%
!!! CTCAATTTTTAGCGTATATG+CGG - chr4_4:79360646-79360665 Msa0706390:intron 30.0%
TCTTTACATGACTAGAGATT+TGG + chr4_4:79360687-79360706 None:intergenic 30.0%
TTGCACATTGATCAATGAAT+AGG + chr4_4:79360729-79360748 None:intergenic 30.0%
TTGTGCTAAATGCCAATTAA+AGG - chr4_4:79360820-79360839 Msa0706390:CDS 30.0%
AAAATAAAACTCCAACCAGA+AGG + chr4_4:79360899-79360918 None:intergenic 30.0%
! ATTCTATTTTCTTGTAGCTG+AGG - chr4_4:79360986-79361005 Msa0706390:five_prime_UTR 30.0%
! TTCTATTTTCTTGTAGCTGA+GGG - chr4_4:79360987-79361006 Msa0706390:five_prime_UTR 30.0%
TTCAGTTATATTGGATTTCC+AGG + chr4_4:79361046-79361065 None:intergenic 30.0%
AGACTTGAAGAAGTTATCGA+CGG + chr4_4:79350062-79350081 None:intergenic 35.0%
AGTTCATGATCTCTGTACTT+AGG + chr4_4:79350447-79350466 None:intergenic 35.0%
GTGAAGTAGTGATGTAGTAT+TGG - chr4_4:79350583-79350602 Msa0706390:three_prime_UTR 35.0%
CCTGCAACATATCTCAATTT+CGG + chr4_4:79350654-79350673 None:intergenic 35.0%
CGAAATTGAGATATGTTGCA+GGG - chr4_4:79350652-79350671 Msa0706390:intron 35.0%
GAAATTGAGATATGTTGCAG+GGG - chr4_4:79350653-79350672 Msa0706390:intron 35.0%
! TAGCTGCTATTTGACAATAC+TGG + chr4_4:79350880-79350899 None:intergenic 35.0%
TGCGAAATTTGAACATTCTG+CGG - chr4_4:79350987-79351006 Msa0706390:intron 35.0%
! GTTTTTACCACCTTAAAGGT+AGG - chr4_4:79351368-79351387 Msa0706390:intron 35.0%
CCGGATCCAATTCATTAATT+TGG - chr4_4:79351395-79351414 Msa0706390:intron 35.0%
TTCTTCTTACGTGGAAGAAA+GGG + chr4_4:79351514-79351533 None:intergenic 35.0%
TTTCTTCTTACGTGGAAGAA+AGG + chr4_4:79351515-79351534 None:intergenic 35.0%
AATTCAAAACTACTTCCGTC+CGG + chr4_4:79351829-79351848 None:intergenic 35.0%
TCTCAGAAACAGTAAGTAGT+AGG + chr4_4:79352127-79352146 None:intergenic 35.0%
!! ATGTTTTTGCATGTCGGTTA+CGG - chr4_4:79352427-79352446 Msa0706390:intron 35.0%
GAGTCTCTTGGGAAAAATAA+TGG + chr4_4:79352455-79352474 None:intergenic 35.0%
GTGAAATGTAAGAGTCTCTT+GGG + chr4_4:79352466-79352485 None:intergenic 35.0%
ATCTTGCCAACTAAACAACT+TGG + chr4_4:79352803-79352822 None:intergenic 35.0%
AGAACAACAATTTCTTGGTG+AGG - chr4_4:79352942-79352961 Msa0706390:intron 35.0%
TCTAATATCAGGTGCCAAAA+AGG + chr4_4:79353007-79353026 None:intergenic 35.0%
ACCCATCAACAACAACAATT+TGG - chr4_4:79353259-79353278 Msa0706390:intron 35.0%
! GCCAAATTGTTGTTGTTGAT+GGG + chr4_4:79353263-79353282 None:intergenic 35.0%
! TTTTTGTGAGTTACCAGATC+TGG + chr4_4:79353349-79353368 None:intergenic 35.0%
TCTGGTAACTCACAAAAATG+TGG - chr4_4:79353351-79353370 Msa0706390:three_prime_UTR 35.0%
CTGGTAACTCACAAAAATGT+GGG - chr4_4:79353352-79353371 Msa0706390:three_prime_UTR 35.0%
! GGTGTACAGATTTGGAATAT+AGG - chr4_4:79353436-79353455 Msa0706390:three_prime_UTR 35.0%
!! TGTGCTTTTGTTTGTCTTGA+AGG - chr4_4:79353543-79353562 Msa0706390:intron 35.0%
AGAATGATCACAATCCAACA+TGG - chr4_4:79353638-79353657 Msa0706390:three_prime_UTR 35.0%
AAAAACACTTGCTTCCATGT+TGG + chr4_4:79353655-79353674 None:intergenic 35.0%
AAACTTGAATTTGTCTCCTC+TGG - chr4_4:79353705-79353724 Msa0706390:intron 35.0%
AGTTCTTTGTCTCTCAGATT+TGG + chr4_4:79354171-79354190 None:intergenic 35.0%
CATTGTTAACAGATAGACAG+AGG - chr4_4:79354354-79354373 Msa0706390:intron 35.0%
ATTATGCTGGGAGTAGTATT+GGG + chr4_4:79354529-79354548 None:intergenic 35.0%
TATTATGCTGGGAGTAGTAT+TGG + chr4_4:79354530-79354549 None:intergenic 35.0%
GCACTAACAATCTATTATGC+TGG + chr4_4:79354542-79354561 None:intergenic 35.0%
TAAAGACCACTTTGTCATAG+AGG - chr4_4:79354947-79354966 Msa0706390:three_prime_UTR 35.0%
AACTAAGCTATTAGGAGAGT+TGG + chr4_4:79354982-79355001 None:intergenic 35.0%
CTCAAGCTAACTAAGCTATT+AGG + chr4_4:79354990-79355009 None:intergenic 35.0%
! CTAATAGCTTAGTTAGCTTG+AGG - chr4_4:79354988-79355007 Msa0706390:intron 35.0%
!! AGTTAGCTTGAGGTTTTTAC+TGG - chr4_4:79354998-79355017 Msa0706390:intron 35.0%
GAACCTTACTGTTACAATGA+GGG - chr4_4:79355340-79355359 Msa0706390:intron 35.0%
AAGGGAAAACTCCATAGTTA+GGG + chr4_4:79355385-79355404 None:intergenic 35.0%
TAAGGGAAAACTCCATAGTT+AGG + chr4_4:79355386-79355405 None:intergenic 35.0%
GTTGTAGCACTCTATTACAA+AGG + chr4_4:79355516-79355535 None:intergenic 35.0%
TGCTACAACTTCAATAGCAA+TGG - chr4_4:79355527-79355546 Msa0706390:intron 35.0%
GGGATTTGAATTGAACTTCA+TGG - chr4_4:79355912-79355931 Msa0706390:intron 35.0%
! TGGAGTACCTGTAAAATCAA+TGG + chr4_4:79355941-79355960 None:intergenic 35.0%
ATGGTAGGACTATGATGTAA+CGG - chr4_4:79356486-79356505 Msa0706390:intron 35.0%
! TTTTGTCCAGTCTACCTTAA+GGG - chr4_4:79356719-79356738 Msa0706390:intron 35.0%
CTGTCATGATGGTTATGTAT+TGG - chr4_4:79356909-79356928 Msa0706390:intron 35.0%
TGGTTATGTATTGGATGACA+AGG - chr4_4:79356918-79356937 Msa0706390:intron 35.0%
GGTTATGTATTGGATGACAA+GGG - chr4_4:79356919-79356938 Msa0706390:intron 35.0%
! TGTTGTTTACCAGCTTCAAA+TGG - chr4_4:79356970-79356989 Msa0706390:intron 35.0%
TGTAATGCAAAGAATCTGGA+AGG + chr4_4:79357005-79357024 None:intergenic 35.0%
TTGCATTACATTGATCCTTC+AGG - chr4_4:79357015-79357034 Msa0706390:intron 35.0%
ATTACATTGATCCTTCAGGA+CGG - chr4_4:79357019-79357038 Msa0706390:intron 35.0%
TGTTACTGATCCATGTTGTA+CGG - chr4_4:79357100-79357119 Msa0706390:intron 35.0%
TCCCATTGTTTCAACTTGAA+TGG - chr4_4:79357229-79357248 Msa0706390:CDS 35.0%
!! TACATGTTTCTGTCTTTTGC+AGG - chr4_4:79357327-79357346 Msa0706390:intron 35.0%
TGGTTATAATTGACGTGGAA+TGG - chr4_4:79357573-79357592 Msa0706390:intron 35.0%
CTTATTCGCAAGAAAAAGCA+TGG - chr4_4:79357650-79357669 Msa0706390:intron 35.0%
TGTAATTCAAGCTTCTCATG+GGG + chr4_4:79357943-79357962 None:intergenic 35.0%
GTGTAATTCAAGCTTCTCAT+GGG + chr4_4:79357944-79357963 None:intergenic 35.0%
AGTGTAATTCAAGCTTCTCA+TGG + chr4_4:79357945-79357964 None:intergenic 35.0%
!! ATTTTAACATTAGAGGGGGA+GGG - chr4_4:79358511-79358530 Msa0706390:intron 35.0%
ATTCAATCTTCTTTCAAGGG+AGG - chr4_4:79358541-79358560 Msa0706390:intron 35.0%
TTCAATCTTCTTTCAAGGGA+GGG - chr4_4:79358542-79358561 Msa0706390:intron 35.0%
ATGTAATTTAAGCATCTCCG+GGG - chr4_4:79358639-79358658 Msa0706390:intron 35.0%
CGTATGGCAATAAAAGGAAA+TGG + chr4_4:79358869-79358888 None:intergenic 35.0%
TAACTAAAAGGACCAATGAG+AGG - chr4_4:79358943-79358962 Msa0706390:CDS 35.0%
AAGGTTAGGTCAACAGTTTA+AGG + chr4_4:79359060-79359079 None:intergenic 35.0%
TGGAAAAGCAACTAAAGGTT+AGG + chr4_4:79359074-79359093 None:intergenic 35.0%
CACATTGGAAAAGCAACTAA+AGG + chr4_4:79359079-79359098 None:intergenic 35.0%
!!! CTTTAGTTGCTTTTCCAATG+TGG - chr4_4:79359077-79359096 Msa0706390:intron 35.0%
GGAAGACAACTACAAATAAG+TGG + chr4_4:79359126-79359145 None:intergenic 35.0%
TACTATGGGAATGAAGATCA+GGG + chr4_4:79359295-79359314 None:intergenic 35.0%
TTACTATGGGAATGAAGATC+AGG + chr4_4:79359296-79359315 None:intergenic 35.0%
CCCATAGTAAAAATGCTGAA+TGG - chr4_4:79359306-79359325 Msa0706390:intron 35.0%
ACTCTATGTTTCATTCGAAG+TGG - chr4_4:79359589-79359608 Msa0706390:intron 35.0%
TATGTTTCATTCGAAGTGGA+AGG - chr4_4:79359593-79359612 Msa0706390:intron 35.0%
! ATATACTGCATGGGGAATTT+TGG - chr4_4:79359980-79359999 Msa0706390:intron 35.0%
TTACATGGGAATGACAACTA+TGG - chr4_4:79360023-79360042 Msa0706390:intron 35.0%
!!! GCAAGAGGATGCAATTTTTT+TGG + chr4_4:79360113-79360132 None:intergenic 35.0%
TCCTAGTGCTAATGTCTAAT+TGG - chr4_4:79360142-79360161 Msa0706390:intron 35.0%
ACCAATTAGACATTAGCACT+AGG + chr4_4:79360146-79360165 None:intergenic 35.0%
TGTCTAATTGGTATCCTACT+AGG - chr4_4:79360154-79360173 Msa0706390:intron 35.0%
TAATTGGTATCCTACTAGGA+TGG - chr4_4:79360158-79360177 Msa0706390:intron 35.0%
!! CAAGTGCATCTTTTGTTTCT+TGG + chr4_4:79360199-79360218 None:intergenic 35.0%
! AGATGCACTTGTTAAAGCAT+CGG - chr4_4:79360208-79360227 Msa0706390:intron 35.0%
!! CGATAAGGATTGATAATGGT+AGG + chr4_4:79360235-79360254 None:intergenic 35.0%
CCAACGATAAGGATTGATAA+TGG + chr4_4:79360239-79360258 None:intergenic 35.0%
CCATTATCAATCCTTATCGT+TGG - chr4_4:79360236-79360255 Msa0706390:intron 35.0%
TAAAAACTACATAAGCCCTG+AGG + chr4_4:79360388-79360407 None:intergenic 35.0%
! AGTACAGTTTGTTCCATTTC+GGG - chr4_4:79360488-79360507 Msa0706390:intron 35.0%
TGTAAACTTCTTCCTATTGC+AGG - chr4_4:79360579-79360598 Msa0706390:CDS 35.0%
! TACATGACTAGAGATTTGGT+TGG + chr4_4:79360683-79360702 None:intergenic 35.0%
TTGATCAATGTGCAAGTTCA+AGG - chr4_4:79360734-79360753 Msa0706390:CDS 35.0%
ACCTCTCTTGAACCTTTAAT+TGG + chr4_4:79360835-79360854 None:intergenic 35.0%
!!! TTTGGTTTTTCTGGGTAGTT+AGG - chr4_4:79360934-79360953 Msa0706390:five_prime_UTR 35.0%
! TCTATTTTCTTGTAGCTGAG+GGG - chr4_4:79360988-79361007 Msa0706390:five_prime_UTR 35.0%
AGAGAGAAAAAGGAAGAGAG+AGG - chr4_4:79349762-79349781 Msa0706390:three_prime_UTR 40.0%
GATAACTTCTTCAAGTCTCG+TGG - chr4_4:79350064-79350083 Msa0706390:three_prime_UTR 40.0%
GGTTTGTATTGTAGCGTAGA+TGG + chr4_4:79350135-79350154 None:intergenic 40.0%
AGTTTAGCCTCGTAATCTCA+AGG + chr4_4:79350475-79350494 None:intergenic 40.0%
ACACTTAAATGCTAGCTCAG+TGG + chr4_4:79350502-79350521 None:intergenic 40.0%
CCGAAATTGAGATATGTTGC+AGG - chr4_4:79350651-79350670 Msa0706390:intron 40.0%
!! ATATTGGTGCTATAGCGTAG+CGG - chr4_4:79350899-79350918 Msa0706390:intron 40.0%
AAATGGCAACTATAGCACTG+TGG - chr4_4:79350961-79350980 Msa0706390:intron 40.0%
!! AAGTCACATTGACTTTCCTG+CGG + chr4_4:79351246-79351265 None:intergenic 40.0%
TCTTCTTACGTGGAAGAAAG+GGG + chr4_4:79351513-79351532 None:intergenic 40.0%
!! TGACTTGCTACGATGATGTA+AGG + chr4_4:79351555-79351574 None:intergenic 40.0%
AGTTCAGCAAACACAACAGA+TGG - chr4_4:79351607-79351626 Msa0706390:intron 40.0%
CAAACACAACAGATGGATCA+GGG - chr4_4:79351614-79351633 Msa0706390:intron 40.0%
AAACACAACAGATGGATCAG+GGG - chr4_4:79351615-79351634 Msa0706390:intron 40.0%
GCTGTAGAGTGATCCAATAA+TGG - chr4_4:79351760-79351779 Msa0706390:intron 40.0%
! AGGAAAAAATGGAGCACTTG+AGG - chr4_4:79351796-79351815 Msa0706390:intron 40.0%
TGAATTCGTTGAATCCGACA+TGG - chr4_4:79351843-79351862 Msa0706390:intron 40.0%
!!! AAGCGTTTTGTTGTTTCACC+AGG - chr4_4:79351955-79351974 Msa0706390:intron 40.0%
GGTGAAATGTAAGAGTCTCT+TGG + chr4_4:79352467-79352486 None:intergenic 40.0%
TGTGCAGAATCTGAACCATT+AGG + chr4_4:79352749-79352768 None:intergenic 40.0%
TTCTGCACAATCTTCTCGTA+AGG - chr4_4:79352760-79352779 Msa0706390:intron 40.0%
! TTAGAGACGGTTCACCTTTT+TGG - chr4_4:79352990-79353009 Msa0706390:intron 40.0%
! GGCCAAATTGTTGTTGTTGA+TGG + chr4_4:79353264-79353283 None:intergenic 40.0%
CGCTTTGTAATTATCTGCAC+AGG + chr4_4:79353285-79353304 None:intergenic 40.0%
AGACAAGATTCTACCAGATC+TGG - chr4_4:79353333-79353352 Msa0706390:three_prime_UTR 40.0%
CTACAGTAGAGATGATACTC+AGG - chr4_4:79353415-79353434 Msa0706390:three_prime_UTR 40.0%
GATACTCAGGTGTACAGATT+TGG - chr4_4:79353428-79353447 Msa0706390:three_prime_UTR 40.0%
! GCTGTTGTTAAGCCTTATGA+AGG - chr4_4:79353499-79353518 Msa0706390:intron 40.0%
TGTTCAACAAGTAGGAAGCA+AGG - chr4_4:79353678-79353697 Msa0706390:intron 40.0%
TTGCACATTTGACTATCCAG+AGG + chr4_4:79353724-79353743 None:intergenic 40.0%
CTAAGCATACCTAGACTTGA+TGG - chr4_4:79354123-79354142 Msa0706390:intron 40.0%
! TAGACTTGATGGCCTAGAAA+CGG - chr4_4:79354134-79354153 Msa0706390:intron 40.0%
GCCTAGAAACGGTATAAAGT+TGG - chr4_4:79354145-79354164 Msa0706390:intron 40.0%
GCCAACTTTATACCGTTTCT+AGG + chr4_4:79354149-79354168 None:intergenic 40.0%
CTCTAGATCAGATGCTACTA+TGG + chr4_4:79354218-79354237 None:intergenic 40.0%
AGAGACGAAGAACATTTAGC+TGG - chr4_4:79354249-79354268 Msa0706390:intron 40.0%
GAGACGAAGAACATTTAGCT+GGG - chr4_4:79354250-79354269 Msa0706390:intron 40.0%
TGGACAATAACGAGGAAACA+AGG - chr4_4:79354304-79354323 Msa0706390:intron 40.0%
TTATGGCTCTTCACTTCGTT+AGG + chr4_4:79354673-79354692 None:intergenic 40.0%
TCAAAGCCTCTATGACAAAG+TGG + chr4_4:79354956-79354975 None:intergenic 40.0%
!!! ATGCGCATCTTGTTTTCATG+AGG - chr4_4:79355255-79355274 Msa0706390:intron 40.0%
!!! TGCGCATCTTGTTTTCATGA+GGG - chr4_4:79355256-79355275 Msa0706390:intron 40.0%
AGAAATAAGATCCCCTCACA+TGG + chr4_4:79355298-79355317 None:intergenic 40.0%
!! GGGGATCTTATTTCTATGAG+CGG - chr4_4:79355303-79355322 Msa0706390:intron 40.0%
GGAACCTTACTGTTACAATG+AGG - chr4_4:79355339-79355358 Msa0706390:intron 40.0%
AGACCCTCATTGTAACAGTA+AGG + chr4_4:79355346-79355365 None:intergenic 40.0%
TAAGGGACAAAAGGACAAAC+AGG + chr4_4:79355581-79355600 None:intergenic 40.0%
!!! TTTATTTTTGTCTCCTGCCG+TGG - chr4_4:79355714-79355733 Msa0706390:intron 40.0%
!!! TTATTTTTGTCTCCTGCCGT+GGG - chr4_4:79355715-79355734 Msa0706390:intron 40.0%
!!! ATGGTGGCCATTGATTTTAC+AGG - chr4_4:79355931-79355950 Msa0706390:intron 40.0%
CTGGAAACTACACACTAGAA+AGG + chr4_4:79356665-79356684 None:intergenic 40.0%
! GTTTTGTCCAGTCTACCTTA+AGG - chr4_4:79356718-79356737 Msa0706390:intron 40.0%
!! TACCTTAAGGGAGCATTTGT+GGG - chr4_4:79356731-79356750 Msa0706390:intron 40.0%
TTCCTCAAAATGCCATTCCT+GGG - chr4_4:79356754-79356773 Msa0706390:intron 40.0%
TCATTTCATAATCCGGAGAG+TGG + chr4_4:79356841-79356860 None:intergenic 40.0%
AAGTTGAAACAATGGGAGAC+AGG + chr4_4:79357226-79357245 None:intergenic 40.0%
TGGAAGCAATACTTACTGTG+AGG - chr4_4:79357249-79357268 Msa0706390:intron 40.0%
! TTCTGTCTTTTGCAGGTAGA+AGG - chr4_4:79357334-79357353 Msa0706390:intron 40.0%
AGGCATTCAAGGAATCATGA+TGG - chr4_4:79357354-79357373 Msa0706390:CDS 40.0%
! ATGACAGGTCCAAAAAGTGT+TGG + chr4_4:79357418-79357437 None:intergenic 40.0%
! TTCCACCATTTGCTACAGAT+TGG + chr4_4:79357465-79357484 None:intergenic 40.0%
!! AGGGATGATTTCTGGTTCTA+TGG + chr4_4:79357701-79357720 None:intergenic 40.0%
GTAATTCAAGCTTCTCATGG+GGG + chr4_4:79357942-79357961 None:intergenic 40.0%
TCTAAGCATCTCTTAGGAGA+GGG + chr4_4:79358043-79358062 None:intergenic 40.0%
ATCTAAGCATCTCTTAGGAG+AGG + chr4_4:79358044-79358063 None:intergenic 40.0%
!! GATTTTAACATTAGAGGGGG+AGG - chr4_4:79358510-79358529 Msa0706390:intron 40.0%
! TTTTAACATTAGAGGGGGAG+GGG - chr4_4:79358512-79358531 Msa0706390:intron 40.0%
TCAATCTTCTTTCAAGGGAG+GGG - chr4_4:79358543-79358562 Msa0706390:intron 40.0%
!!! TATTTTTTGCATGAGAGGGG+AGG - chr4_4:79358583-79358602 Msa0706390:intron 40.0%
!!! ATTTTTTGCATGAGAGGGGA+GGG - chr4_4:79358584-79358603 Msa0706390:intron 40.0%
TGTAATTTAAGCATCTCCGG+GGG - chr4_4:79358640-79358659 Msa0706390:intron 40.0%
TATTCCTGGCAAACTACTAC+AGG + chr4_4:79358730-79358749 None:intergenic 40.0%
GTGAACCGTATGGCAATAAA+AGG + chr4_4:79358875-79358894 None:intergenic 40.0%
GGAAGAAAATGCAACCACAT+TGG + chr4_4:79359094-79359113 None:intergenic 40.0%
ACAAATAAGTGGGGAGATGA+AGG + chr4_4:79359115-79359134 None:intergenic 40.0%
GTTGAACGCAATAAAGCTCT+TGG - chr4_4:79359194-79359213 Msa0706390:intron 40.0%
! TCTGTAGAGTTGCTATTCAG+TGG - chr4_4:79359264-79359283 Msa0706390:intron 40.0%
!! GATCACAGTTTCTAGAGCTA+GGG - chr4_4:79359526-79359545 Msa0706390:intron 40.0%
TTAGACATTAGCACTAGGAG+TGG + chr4_4:79360141-79360160 None:intergenic 40.0%
! AGGAGCTGATTTCAAAGAGA+TGG - chr4_4:79360265-79360284 Msa0706390:intron 40.0%
! AGCTGATTTCAAAGAGATGG+AGG - chr4_4:79360268-79360287 Msa0706390:intron 40.0%
!! AGTTATAATTGGTTGGCCTG+AGG - chr4_4:79360330-79360349 Msa0706390:intron 40.0%
TGGTATGTAATGTCACCTCA+GGG - chr4_4:79360370-79360389 Msa0706390:intron 40.0%
ATGTTCAATGTCGCAGATCT+TGG - chr4_4:79360407-79360426 Msa0706390:intron 40.0%
GATAGGCTTGAAAGTTCATC+TGG - chr4_4:79360444-79360463 Msa0706390:intron 40.0%
CTACTTTGAACATCCCGAAA+TGG + chr4_4:79360504-79360523 None:intergenic 40.0%
CATTTCGGGATGTTCAAAGT+AGG - chr4_4:79360502-79360521 Msa0706390:intron 40.0%
AAACTTCTTCCTATTGCAGG+TGG - chr4_4:79360582-79360601 Msa0706390:CDS 40.0%
GAAATTTCACCACCTGCAAT+AGG + chr4_4:79360594-79360613 None:intergenic 40.0%
GCCAATTAAAGGTTCAAGAG+AGG - chr4_4:79360831-79360850 Msa0706390:CDS 40.0%
! CTATTTTCTTGTAGCTGAGG+GGG - chr4_4:79360989-79361008 Msa0706390:five_prime_UTR 40.0%
!!! CAGTTGTCGTTTTCTGCTTC+TGG - chr4_4:79350200-79350219 Msa0706390:three_prime_UTR 45.0%
TGATCGAGATGTGCTCTCTA+AGG - chr4_4:79350229-79350248 Msa0706390:intron 45.0%
CTCTGTACCTTGAGATTACG+AGG - chr4_4:79350465-79350484 Msa0706390:intron 45.0%
GATATGTTGCAGGGGCTATA+AGG - chr4_4:79350661-79350680 Msa0706390:intron 45.0%
!! GTTGACTTGGAGATGATGAG+AGG - chr4_4:79350683-79350702 Msa0706390:intron 45.0%
GGATTGATCCTCATCTTGTG+AGG - chr4_4:79350813-79350832 Msa0706390:intron 45.0%
TCTCTGATCCTCACAAGATG+AGG + chr4_4:79350824-79350843 None:intergenic 45.0%
TTAGAGAAGTTTAGCCTGCG+AGG - chr4_4:79351140-79351159 Msa0706390:intron 45.0%
TACCAGAGAGGGAGCAAAAT+AGG - chr4_4:79351320-79351339 Msa0706390:intron 45.0%
CTTCTTACGTGGAAGAAAGG+GGG + chr4_4:79351512-79351531 None:intergenic 45.0%
GCAAACACAACAGATGGATC+AGG - chr4_4:79351613-79351632 Msa0706390:intron 45.0%
! AATGGAGCACTTGAGGAACT+TGG - chr4_4:79351803-79351822 Msa0706390:intron 45.0%
CATCTATCGAACAAGCGACA+AGG + chr4_4:79352844-79352863 None:intergenic 45.0%
GGCAACTTGTGCATTATCTG+AGG - chr4_4:79352963-79352982 Msa0706390:intron 45.0%
GAAGCTCAAAGTGTATGCTG+AGG - chr4_4:79353374-79353393 Msa0706390:three_prime_UTR 45.0%
GTGTATGCTGAGGAATGTGT+TGG - chr4_4:79353384-79353403 Msa0706390:three_prime_UTR 45.0%
GGAGTATGGAAGAGAGAAGA+GGG - chr4_4:79353967-79353986 Msa0706390:intron 45.0%
! GTTTCTAGGCCATCAAGTCT+AGG + chr4_4:79354135-79354154 None:intergenic 45.0%
CGAAGAACATTTAGCTGGGA+AGG - chr4_4:79354254-79354273 Msa0706390:intron 45.0%
TAGGAAATGGGTGAGAAGAG+AGG - chr4_4:79354398-79354417 Msa0706390:intron 45.0%
TGGGATCTTGCACAAAGACA+AGG + chr4_4:79354838-79354857 None:intergenic 45.0%
TGCAAGATCCCAAAGTCTCA+AGG - chr4_4:79354846-79354865 Msa0706390:intron 45.0%
GCAAGATCCCAAAGTCTCAA+GGG - chr4_4:79354847-79354866 Msa0706390:intron 45.0%
!! AATGTGTTGGCTTGGGACTT+TGG - chr4_4:79355114-79355133 Msa0706390:CDS 45.0%
ATCAAACCTGAGACCTTGAG+AGG + chr4_4:79355148-79355167 None:intergenic 45.0%
!!! GCATCTTGTTTTCATGAGGG+TGG - chr4_4:79355259-79355278 Msa0706390:intron 45.0%
TGGTGTGTGATACCATGTGA+GGG - chr4_4:79355283-79355302 Msa0706390:intron 45.0%
CAGAAAACTGCAGACATCTC+TGG - chr4_4:79355651-79355670 Msa0706390:intron 45.0%
AAAACTGCAGACATCTCTGG+TGG - chr4_4:79355654-79355673 Msa0706390:intron 45.0%
ACTTTCCTGGATTACTTGGC+TGG - chr4_4:79355889-79355908 Msa0706390:intron 45.0%
CTTTCCTGGATTACTTGGCT+GGG - chr4_4:79355890-79355909 Msa0706390:intron 45.0%
TTTCCTGGATTACTTGGCTG+GGG - chr4_4:79355891-79355910 Msa0706390:intron 45.0%
AATGCTCCCTTAAGGTAGAC+TGG + chr4_4:79356728-79356747 None:intergenic 45.0%
!! CTACCTTAAGGGAGCATTTG+TGG - chr4_4:79356730-79356749 Msa0706390:intron 45.0%
AACCCACAAATGCTCCCTTA+AGG + chr4_4:79356736-79356755 None:intergenic 45.0%
GTTCCTCAAAATGCCATTCC+TGG - chr4_4:79356753-79356772 Msa0706390:intron 45.0%
TCCTCAAAATGCCATTCCTG+GGG - chr4_4:79356755-79356774 Msa0706390:intron 45.0%
ACCAGTGAACAGGGGTAAAA+GGG + chr4_4:79356782-79356801 None:intergenic 45.0%
TACCAGTGAACAGGGGTAAA+AGG + chr4_4:79356783-79356802 None:intergenic 45.0%
TTACCCCTGTTCACTGGTAT+AGG - chr4_4:79356784-79356803 Msa0706390:intron 45.0%
TACCCCTGTTCACTGGTATA+GGG - chr4_4:79356785-79356804 Msa0706390:intron 45.0%
TGGGGAAGTAAGGAAGGATA+AGG + chr4_4:79356815-79356834 None:intergenic 45.0%
ATAATCCGGAGAGTGGAGTT+GGG + chr4_4:79356834-79356853 None:intergenic 45.0%
TGAAGCTGGTAAACAACACG+AGG + chr4_4:79356968-79356987 None:intergenic 45.0%
! CGTGAATTGCCATTTGAAGC+TGG + chr4_4:79356982-79357001 None:intergenic 45.0%
TATGAATTTGGCCGTCCTGA+AGG + chr4_4:79357033-79357052 None:intergenic 45.0%
GGCAATTATTGAGGTTGGAG+AGG - chr4_4:79357132-79357151 Msa0706390:CDS 45.0%
AGACAAGCGATTTCCTACGT+GGG - chr4_4:79357174-79357193 Msa0706390:CDS 45.0%
!! TTGCAGGTAGAAGGCATTCA+AGG - chr4_4:79357343-79357362 Msa0706390:intron 45.0%
! ACCATTTGCTACAGATTGGC+TGG + chr4_4:79357461-79357480 None:intergenic 45.0%
AGCCAATCTGTAGCAAATGG+TGG - chr4_4:79357460-79357479 Msa0706390:CDS 45.0%
AACATAATAGGGGAGGGGAA+GGG + chr4_4:79357968-79357987 None:intergenic 45.0%
TAACATAATAGGGGAGGGGA+AGG + chr4_4:79357969-79357988 None:intergenic 45.0%
CTAAGCATCTCTTAGGAGAG+GGG + chr4_4:79358042-79358061 None:intergenic 45.0%
!!! TTTTTTGCATGAGAGGGGAG+GGG - chr4_4:79358585-79358604 Msa0706390:intron 45.0%
GTTGTGTGTAGTGAACCGTA+TGG + chr4_4:79358885-79358904 None:intergenic 45.0%
!! TCAAAAGGTGTTGCCTTGCA+TGG + chr4_4:79358969-79358988 None:intergenic 45.0%
ATGTAAGGGGGCTACTCAAA+AGG + chr4_4:79358984-79359003 None:intergenic 45.0%
! GTGCAATAGTTAGTCTGAGC+TGG - chr4_4:79359504-79359523 Msa0706390:intron 45.0%
!! GGATCACAGTTTCTAGAGCT+AGG - chr4_4:79359525-79359544 Msa0706390:intron 45.0%
!!! TGCATGGGGAATTTTGGAGT+TGG - chr4_4:79359986-79360005 Msa0706390:intron 45.0%
!! TCGCTTTGTGCTGCTTACAT+GGG - chr4_4:79360009-79360028 Msa0706390:intron 45.0%
!! TTGGAATTGTTTGGTGCGCA+AGG + chr4_4:79360094-79360113 None:intergenic 45.0%
CTACTAGGATGGAGTTGTGA+CGG - chr4_4:79360169-79360188 Msa0706390:intron 45.0%
TCAATCCTTATCGTTGGCGT+AGG - chr4_4:79360242-79360261 Msa0706390:intron 45.0%
GTGGTATGTAATGTCACCTC+AGG - chr4_4:79360369-79360388 Msa0706390:intron 45.0%
CAGATCTTGGATGCAGACAA+AGG - chr4_4:79360420-79360439 Msa0706390:intron 45.0%
TGGATGCAGACAAAGGAGAT+AGG - chr4_4:79360427-79360446 Msa0706390:intron 45.0%
AGCATGAGTTCTCAGCTCTT+TGG + chr4_4:79360800-79360819 None:intergenic 45.0%
! CTGTCAGCTGCTTTATCTTC+AGG - chr4_4:79360859-79360878 Msa0706390:five_prime_UTR 45.0%
!!! ATATTTCAAAATTATTTTAA+TGG - chr4_4:79352396-79352415 Msa0706390:intron 5.0%
!! AATATTTATTTATGTAAAAA+TGG + chr4_4:79358111-79358130 None:intergenic 5.0%
!!! GAATTTTAATTATAATAAAA+TGG - chr4_4:79358395-79358414 Msa0706390:intron 5.0%
! GAAGTGTTTCCCGGATTCAG+TGG + chr4_4:79350031-79350050 None:intergenic 50.0%
TTCAAGTCTCGTGGCTACCA+AGG - chr4_4:79350073-79350092 Msa0706390:three_prime_UTR 50.0%
CGATCTGAGAGAAGAGACCT+TGG + chr4_4:79350093-79350112 None:intergenic 50.0%
AGGTCTCTTCTCTCAGATCG+AGG - chr4_4:79350093-79350112 Msa0706390:three_prime_UTR 50.0%
CAGGGGCTATAAGGTTGACT+TGG - chr4_4:79350670-79350689 Msa0706390:intron 50.0%
!! CATTGACTTTCCTGCGGCAA+AGG + chr4_4:79351240-79351259 None:intergenic 50.0%
! CTCCTATTTTGCTCCCTCTC+TGG + chr4_4:79351325-79351344 None:intergenic 50.0%
CACCTTAAAGGTAGGCGATC+CGG - chr4_4:79351376-79351395 Msa0706390:intron 50.0%
ATCCGGATCGCCTACCTTTA+AGG + chr4_4:79351381-79351400 None:intergenic 50.0%
GTTTCACAACGCAGACGTGA+AGG - chr4_4:79352034-79352053 Msa0706390:intron 50.0%
AAAAGCTGCAAGCCCCTAAC+AGG + chr4_4:79352277-79352296 None:intergenic 50.0%
TAAACAGACAGGCGCACTAC+AGG + chr4_4:79353863-79353882 None:intergenic 50.0%
! GGGAGTATGGAAGAGAGAAG+AGG - chr4_4:79353966-79353985 Msa0706390:intron 50.0%
AGATCCCAAAGTCTCAAGGG+TGG - chr4_4:79354850-79354869 Msa0706390:intron 50.0%
CTGACCACCCTTGAGACTTT+GGG + chr4_4:79354857-79354876 None:intergenic 50.0%
ACTGACCACCCTTGAGACTT+TGG + chr4_4:79354858-79354877 None:intergenic 50.0%
! TTTGGAGTGTGCTCCTCTCA+AGG - chr4_4:79355132-79355151 Msa0706390:CDS 50.0%
GTCTCAGGTTTGATTCTCCC+CGG - chr4_4:79355154-79355173 Msa0706390:intron 50.0%
! ATTCTCCCCGGTGCCAATTT+CGG - chr4_4:79355166-79355185 Msa0706390:intron 50.0%
!! CTTTCAGTGGACTGTTGGCA+TGG + chr4_4:79355234-79355253 None:intergenic 50.0%
!! GCATGCTTTCAGTGGACTGT+TGG + chr4_4:79355239-79355258 None:intergenic 50.0%
CAAGATGCGCATGCTTTCAG+TGG + chr4_4:79355247-79355266 None:intergenic 50.0%
!! CTTGTTTTCATGAGGGTGGC+TGG - chr4_4:79355263-79355282 Msa0706390:intron 50.0%
CTGGTGTGTGATACCATGTG+AGG - chr4_4:79355282-79355301 Msa0706390:intron 50.0%
GGTGTGTGATACCATGTGAG+GGG - chr4_4:79355284-79355303 Msa0706390:intron 50.0%
ATGAGCGGCTAAGTCAGTGT+AGG - chr4_4:79355318-79355337 Msa0706390:intron 50.0%
GAGCTGGAGAAGCTCTATTC+TGG - chr4_4:79355676-79355695 Msa0706390:intron 50.0%
CTGGAGAAGCTCTATTCTGG+TGG - chr4_4:79355679-79355698 Msa0706390:intron 50.0%
AAGCTCTATTCTGGTGGCCA+AGG - chr4_4:79355685-79355704 Msa0706390:intron 50.0%
! TGGTCTGAGATCATGACCCA+CGG + chr4_4:79355734-79355753 None:intergenic 50.0%
TGGGTCATGATCTCAGACCA+AGG - chr4_4:79355734-79355753 Msa0706390:intron 50.0%
TTCCTGGATTACTTGGCTGG+GGG - chr4_4:79355892-79355911 Msa0706390:intron 50.0%
CCTCAAAATGCCATTCCTGG+GGG - chr4_4:79356756-79356775 Msa0706390:intron 50.0%
AGCCCTATACCAGTGAACAG+GGG + chr4_4:79356790-79356809 None:intergenic 50.0%
CAGCCCTATACCAGTGAACA+GGG + chr4_4:79356791-79356810 None:intergenic 50.0%
TCAGCCCTATACCAGTGAAC+AGG + chr4_4:79356792-79356811 None:intergenic 50.0%
TGGAGTTGGGGAAGTAAGGA+AGG + chr4_4:79356821-79356840 None:intergenic 50.0%
AGAGTGGAGTTGGGGAAGTA+AGG + chr4_4:79356825-79356844 None:intergenic 50.0%
TAATCCGGAGAGTGGAGTTG+GGG + chr4_4:79356833-79356852 None:intergenic 50.0%
CATAATCCGGAGAGTGGAGT+TGG + chr4_4:79356835-79356854 None:intergenic 50.0%
CAGACAAGCGATTTCCTACG+TGG - chr4_4:79357173-79357192 Msa0706390:CDS 50.0%
GACAAGCGATTTCCTACGTG+GGG - chr4_4:79357175-79357194 Msa0706390:CDS 50.0%
CGATTTCCTACGTGGGGATT+TGG - chr4_4:79357181-79357200 Msa0706390:CDS 50.0%
! TTTGGAGCACGACCGATTGA+TGG - chr4_4:79357199-79357218 Msa0706390:CDS 50.0%
TGGGAGACAGGACCATCAAT+CGG + chr4_4:79357214-79357233 None:intergenic 50.0%
CTGCTTAACGTTTCTCTCGC+AGG - chr4_4:79357391-79357410 Msa0706390:CDS 50.0%
! CTCGCAGGACCAACACTTTT+TGG - chr4_4:79357406-79357425 Msa0706390:CDS 50.0%
GCCAGCCAATCTGTAGCAAA+TGG - chr4_4:79357457-79357476 Msa0706390:CDS 50.0%
ACCAGAAATCATCCCTTCGC+CGG - chr4_4:79357705-79357724 Msa0706390:intron 50.0%
AATCACCAATCCCACCTCTC+CGG + chr4_4:79357727-79357746 None:intergenic 50.0%
TTCAAGCTTCTCATGGGGGA+GGG + chr4_4:79357938-79357957 None:intergenic 50.0%
ATTCAAGCTTCTCATGGGGG+AGG + chr4_4:79357939-79357958 None:intergenic 50.0%
AATTTAAGCATCTCCGGGGG+AGG - chr4_4:79358643-79358662 Msa0706390:intron 50.0%
ATTTAAGCATCTCCGGGGGA+GGG - chr4_4:79358644-79358663 Msa0706390:intron 50.0%
! TGTGCCTGTAGTAGTTTGCC+AGG - chr4_4:79358723-79358742 Msa0706390:intron 50.0%
!! GTCGCTTTGTGCTGCTTACA+TGG - chr4_4:79360008-79360027 Msa0706390:intron 50.0%
CTAGGAGTGGAAAACGCAAG+AGG + chr4_4:79360128-79360147 None:intergenic 50.0%
CGTCACAACTCCATCCTAGT+AGG + chr4_4:79360171-79360190 None:intergenic 50.0%
ATCCTTATCGTTGGCGTAGG+AGG - chr4_4:79360245-79360264 Msa0706390:intron 50.0%
CTCCAACCAGAAGGCTTGAA+CGG + chr4_4:79360890-79360909 None:intergenic 50.0%
CCAGGTTCAGTGTAGACTGT+AGG + chr4_4:79361028-79361047 None:intergenic 50.0%
CCTACAGTCTACACTGAACC+TGG - chr4_4:79361025-79361044 Msa0706390:five_prime_UTR 50.0%
AATTGCTGCTCCGATGTCGC+CGG - chr4_4:79349971-79349990 Msa0706390:three_prime_UTR 55.0%
!! GCGTCGTTGGAAGTGTTTCC+CGG + chr4_4:79350040-79350059 None:intergenic 55.0%
GAAGTTATCGACGGCGTCGT+TGG + chr4_4:79350053-79350072 None:intergenic 55.0%
CGGTCGAGATGTGCTCTTGT+TGG - chr4_4:79351007-79351026 Msa0706390:intron 55.0%
! GGATTTTCTGTGGTCCTCGC+AGG + chr4_4:79351157-79351176 None:intergenic 55.0%
AGATTGCCTACCTTTGCCGC+AGG - chr4_4:79351227-79351246 Msa0706390:intron 55.0%
GACTTTCCTGCGGCAAAGGT+AGG + chr4_4:79351236-79351255 None:intergenic 55.0%
! CGGATCGCCTACCTTTAAGG+TGG + chr4_4:79351378-79351397 None:intergenic 55.0%
GAGCACTTGAGGAACTTGGC+CGG - chr4_4:79351807-79351826 Msa0706390:intron 55.0%
ACTTGAGGAACTTGGCCGGA+CGG - chr4_4:79351811-79351830 Msa0706390:intron 55.0%
TGTGCTCCTCTCAAGGTCTC+AGG - chr4_4:79355139-79355158 Msa0706390:CDS 55.0%
CCAAACTAGCCCGCCGAAAT+TGG + chr4_4:79355182-79355201 None:intergenic 55.0%
!! CCAATTTCGGCGGGCTAGTT+TGG - chr4_4:79355179-79355198 Msa0706390:intron 55.0%
ATCCCCCAGCCAAGTAATCC+AGG + chr4_4:79355897-79355916 None:intergenic 55.0%
! CCCCCAGGAATGGCATTTTG+AGG + chr4_4:79356759-79356778 None:intergenic 55.0%
! GCCCTTTTACCCCTGTTCAC+TGG - chr4_4:79356778-79356797 Msa0706390:intron 55.0%
ACTTCCCCAACTCCACTCTC+CGG - chr4_4:79356826-79356845 Msa0706390:intron 55.0%
TCCGGCGAAGGGATGATTTC+TGG + chr4_4:79357709-79357728 None:intergenic 55.0%
AAATCATCCCTTCGCCGGAG+AGG - chr4_4:79357710-79357729 Msa0706390:intron 55.0%
! GAGGTGGGATTGGTGATTCC+TGG - chr4_4:79357729-79357748 Msa0706390:intron 55.0%
TCAAGCTTCTCATGGGGGAG+GGG + chr4_4:79357937-79357956 None:intergenic 55.0%
GGGATATTACAACCCTCCCC+CGG + chr4_4:79358659-79358678 None:intergenic 55.0%
GACCAATGAGAGGCCATGCA+AGG - chr4_4:79358953-79358972 Msa0706390:CDS 55.0%
TGCCTTGCATGGCCTCTCAT+TGG + chr4_4:79358958-79358977 None:intergenic 55.0%
CTCCTCCTACGCCAACGATA+AGG + chr4_4:79360250-79360269 None:intergenic 55.0%
TCATCACAGCTAAGCGCCTC+AGG + chr4_4:79360349-79360368 None:intergenic 55.0%
AGGCGCTTAGCTGTGATGAG+TGG - chr4_4:79360350-79360369 Msa0706390:intron 55.0%
GTCTGTCCGTTCAAGCCTTC+TGG - chr4_4:79360881-79360900 Msa0706390:five_prime_UTR 55.0%
GTCCGTTCAAGCCTTCTGGT+TGG - chr4_4:79360885-79360904 Msa0706390:five_prime_UTR 55.0%
! CAGTTCCGCCGATTGCCGTA+CGG + chr4_4:79350000-79350019 None:intergenic 60.0%
TGCCGGAGGTCCACTGAATC+CGG - chr4_4:79350018-79350037 Msa0706390:three_prime_UTR 60.0%
TCCCGGATTCAGTGGACCTC+CGG + chr4_4:79350023-79350042 None:intergenic 60.0%
TAGCCCGCCGAAATTGGCAC+CGG + chr4_4:79355176-79355195 None:intergenic 60.0%
GCAGACATCTCTGGTGGAGC+TGG - chr4_4:79355660-79355679 Msa0706390:intron 60.0%
CTGAGATCATGACCCACGGC+AGG + chr4_4:79355730-79355749 None:intergenic 60.0%
CCACGCACACTGGTGCAAAC+TGG + chr4_4:79356684-79356703 None:intergenic 60.0%
CCAGTTTGCACCAGTGTGCG+TGG - chr4_4:79356681-79356700 Msa0706390:intron 60.0%
TTTGCACCAGTGTGCGTGGC+AGG - chr4_4:79356685-79356704 Msa0706390:intron 60.0%
TTGCACCAGTGTGCGTGGCA+GGG - chr4_4:79356686-79356705 Msa0706390:intron 60.0%
GGTAAAAGGGCCCCCAGGAA+TGG + chr4_4:79356769-79356788 None:intergenic 60.0%
CGTGCTCCAAATCCCCACGT+AGG + chr4_4:79357190-79357209 None:intergenic 60.0%
AATCCCACCTCTCCGGCGAA+GGG + chr4_4:79357720-79357739 None:intergenic 60.0%
ACGGCAATCGGCGGAACTGC+CGG - chr4_4:79350001-79350020 Msa0706390:three_prime_UTR 65.0%
GCCGGAGGTCCACTGAATCC+GGG - chr4_4:79350019-79350038 Msa0706390:three_prime_UTR 65.0%
! CTCCCCGGTGCCAATTTCGG+CGG - chr4_4:79355169-79355188 Msa0706390:intron 65.0%
! TCCCCGGTGCCAATTTCGGC+GGG - chr4_4:79355170-79355189 Msa0706390:intron 65.0%
AGCCCGCCGAAATTGGCACC+GGG + chr4_4:79355175-79355194 None:intergenic 65.0%
ACCAGTGTGCGTGGCAGGGT+GGG - chr4_4:79356690-79356709 Msa0706390:intron 65.0%
ACAGGGGTAAAAGGGCCCCC+AGG + chr4_4:79356774-79356793 None:intergenic 65.0%
TCATCCCTTCGCCGGAGAGG+TGG - chr4_4:79357713-79357732 Msa0706390:intron 65.0%
CATCCCTTCGCCGGAGAGGT+GGG - chr4_4:79357714-79357733 Msa0706390:intron 65.0%
CAATCCCACCTCTCCGGCGA+AGG + chr4_4:79357721-79357740 None:intergenic 65.0%
CTTCGCCGGAGAGGTGGGAT+TGG - chr4_4:79357719-79357738 Msa0706390:intron 65.0%
TGCTGCTCCGATGTCGCCGG+TGG - chr4_4:79349974-79349993 Msa0706390:three_prime_UTR 70.0%
CGTACGGCCACCGGCGACAT+CGG + chr4_4:79349984-79350003 None:intergenic 70.0%
CGATGTCGCCGGTGGCCGTA+CGG - chr4_4:79349982-79350001 Msa0706390:three_prime_UTR 70.0%
GCCGGTGGCCGTACGGCAAT+CGG - chr4_4:79349989-79350008 Msa0706390:three_prime_UTR 70.0%
GCCGATTGCCGTACGGCCAC+CGG + chr4_4:79349993-79350012 None:intergenic 70.0%
GGTGGCCGTACGGCAATCGG+CGG - chr4_4:79349992-79350011 Msa0706390:three_prime_UTR 70.0%
GCAATCGGCGGAACTGCCGG+AGG - chr4_4:79350004-79350023 Msa0706390:three_prime_UTR 70.0%
GCCCGCCGAAATTGGCACCG+GGG + chr4_4:79355174-79355193 None:intergenic 70.0%
CACCAGTGTGCGTGGCAGGG+TGG - chr4_4:79356689-79356708 Msa0706390:intron 70.0%
CCAGTGTGCGTGGCAGGGTG+GGG - chr4_4:79356691-79356710 Msa0706390:intron 70.0%
GTGCGTGGCAGGGTGGGGTA+AGG - chr4_4:79356696-79356715 Msa0706390:intron 70.0%
CCCCACCCTGCCACGCACAC+TGG + chr4_4:79356694-79356713 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 79349727 79361094 79349727 ID=Msa0706390;Name=Msa0706390
chr4_4 mRNA 79349727 79361094 79349727 ID=Msa0706390-mRNA-1;Parent=Msa0706390;Name=Msa0706390-mRNA-1;_AED=0.12;_eAED=0.12;_QI=238|0.92|1|1|0.85|0.86|15|1228|287
chr4_4 exon 79349727 79350220 79349727 ID=Msa0706390-mRNA-1:exon:25543;Parent=Msa0706390-mRNA-1
chr4_4 exon 79350302 79350398 79350302 ID=Msa0706390-mRNA-1:exon:25542;Parent=Msa0706390-mRNA-1
chr4_4 exon 79350516 79350645 79350516 ID=Msa0706390-mRNA-1:exon:25541;Parent=Msa0706390-mRNA-1
chr4_4 exon 79353308 79353472 79353308 ID=Msa0706390-mRNA-1:exon:25540;Parent=Msa0706390-mRNA-1
chr4_4 exon 79353551 79353688 79353551 ID=Msa0706390-mRNA-1:exon:25539;Parent=Msa0706390-mRNA-1
chr4_4 exon 79353762 79353838 79353762 ID=Msa0706390-mRNA-1:exon:25538;Parent=Msa0706390-mRNA-1
chr4_4 exon 79354869 79354983 79354869 ID=Msa0706390-mRNA-1:exon:25537;Parent=Msa0706390-mRNA-1
chr4_4 exon 79355066 79355167 79355066 ID=Msa0706390-mRNA-1:exon:25536;Parent=Msa0706390-mRNA-1
chr4_4 exon 79357122 79357256 79357122 ID=Msa0706390-mRNA-1:exon:25535;Parent=Msa0706390-mRNA-1
chr4_4 exon 79357345 79357530 79357345 ID=Msa0706390-mRNA-1:exon:25534;Parent=Msa0706390-mRNA-1
chr4_4 exon 79357837 79357893 79357837 ID=Msa0706390-mRNA-1:exon:25533;Parent=Msa0706390-mRNA-1
chr4_4 exon 79358766 79358814 79358766 ID=Msa0706390-mRNA-1:exon:25532;Parent=Msa0706390-mRNA-1
chr4_4 exon 79358906 79359054 79358906 ID=Msa0706390-mRNA-1:exon:25531;Parent=Msa0706390-mRNA-1
chr4_4 exon 79360571 79360618 79360571 ID=Msa0706390-mRNA-1:exon:25530;Parent=Msa0706390-mRNA-1
chr4_4 exon 79360707 79361094 79360707 ID=Msa0706390-mRNA-1:exon:25529;Parent=Msa0706390-mRNA-1
chr4_4 five_prime_UTR 79360857 79361094 79360857 ID=Msa0706390-mRNA-1:five_prime_utr;Parent=Msa0706390-mRNA-1
chr4_4 CDS 79360707 79360856 79360707 ID=Msa0706390-mRNA-1:cds;Parent=Msa0706390-mRNA-1
chr4_4 CDS 79360571 79360618 79360571 ID=Msa0706390-mRNA-1:cds;Parent=Msa0706390-mRNA-1
chr4_4 CDS 79358906 79359054 79358906 ID=Msa0706390-mRNA-1:cds;Parent=Msa0706390-mRNA-1
chr4_4 CDS 79358766 79358814 79358766 ID=Msa0706390-mRNA-1:cds;Parent=Msa0706390-mRNA-1
chr4_4 CDS 79357837 79357893 79357837 ID=Msa0706390-mRNA-1:cds;Parent=Msa0706390-mRNA-1
chr4_4 CDS 79357345 79357530 79357345 ID=Msa0706390-mRNA-1:cds;Parent=Msa0706390-mRNA-1
chr4_4 CDS 79357122 79357256 79357122 ID=Msa0706390-mRNA-1:cds;Parent=Msa0706390-mRNA-1
chr4_4 CDS 79355078 79355167 79355078 ID=Msa0706390-mRNA-1:cds;Parent=Msa0706390-mRNA-1
chr4_4 three_prime_UTR 79355066 79355077 79355066 ID=Msa0706390-mRNA-1:three_prime_utr;Parent=Msa0706390-mRNA-1
chr4_4 three_prime_UTR 79354869 79354983 79354869 ID=Msa0706390-mRNA-1:three_prime_utr;Parent=Msa0706390-mRNA-1
chr4_4 three_prime_UTR 79353762 79353838 79353762 ID=Msa0706390-mRNA-1:three_prime_utr;Parent=Msa0706390-mRNA-1
chr4_4 three_prime_UTR 79353551 79353688 79353551 ID=Msa0706390-mRNA-1:three_prime_utr;Parent=Msa0706390-mRNA-1
chr4_4 three_prime_UTR 79353308 79353472 79353308 ID=Msa0706390-mRNA-1:three_prime_utr;Parent=Msa0706390-mRNA-1
chr4_4 three_prime_UTR 79350516 79350645 79350516 ID=Msa0706390-mRNA-1:three_prime_utr;Parent=Msa0706390-mRNA-1
chr4_4 three_prime_UTR 79350302 79350398 79350302 ID=Msa0706390-mRNA-1:three_prime_utr;Parent=Msa0706390-mRNA-1
chr4_4 three_prime_UTR 79349727 79350220 79349727 ID=Msa0706390-mRNA-1:three_prime_utr;Parent=Msa0706390-mRNA-1
Gene Sequence

>Msa0706390

ATGGGAAATTGCTGCTCCGATGTCGCCGGTGGCCGTACGGCAATCGGCGGAACTGCCGGAGGTCCACTGAATCCGGGAAACACTTCCAACGACGCCGTCGATAACTTCTTCAAGTCTCGTGGCTACCAAGGTCTCTTCTCTCAGATCGAGTTGTCGTTTTCTGCTTCTGGTTTGCGTGATCGAGATGTGCTCTCTAAGAGTGATCCAATAATGGTTCTTTATGCAAAAGGAAAAAATGGAGCACTTGAGGAACTTGGCCGGACGGAAGTAGTTTTGAATTCGTTGAATCCGACATGGATTACTAAACAAACTCTCATTTATCATTTTGAGGTTGTTCAGGTTTTAGTGTTTCATGTTTATGATGTTGATACTCAGTTTCACAACGCAGACGTGAAGATACTTAAGTTAGAAGAACAACAATTTCTTGGTGAGGCAACTTGTGCATTATCTGAGATAATTACAAAGCGTGATCGATCATTGACATTAGATTTACTCAGACAAGATTCTACCAGATCTGGTAACTCACAAAAATGTGGGAAGCTCAAAGTGTATGCTGAGGAATGTGTTGGCTCAAAGACTACAGTAGAGATGATACTCAGGTGTACAGATTTGGAATATAGGGATCTATTCTCAAAGAGTGATCCCTTTTTATTAGTATCAAAAGTTGTGGAAAATGGTGACCATATTCCTATTTGCAAAACAGAAGCTATTAAGAATGATCACAATCCAACATGGAAGCAAGTGTTTTTGAATGTTCAACAAGTAGGAAGCAAGAAAACTGCAGACATCTCTGGTGGAGCTGGAGAAGCTCTATTCTGGTGGCCAAGGAGAACATTTATTTTTGTCTCCTGCCGTGGGTCATGA
Protein sequence

>Msa0706390

MGNCCSDVAGGRTAIGGTAGGPLNPGNTSNDAVDNFFKSRGYQGLFSQIELSFSASGLRDRDVLSKSDPIMVLYAKGKNGALEELGRTEVVLNSLNPTWITKQTLIYHFEVVQVLVFHVYDVDTQFHNADVKILKLEEQQFLGEATCALSEIITKRDRSLTLDLLRQDSTRSGNSQKCGKLKVYAEECVGSKTTVEMILRCTDLEYRDLFSKSDPFLLVSKVVENGDHIPICKTEAIKNDHNPTWKQVFLNVQQVGSKKTADISGGAGEALFWWPRRTFIFVSCRGS*