Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0961670 | sp|P0C042|Y4597_ARATH | 50.538 | 279 | 127 | 4 | 83 | 360 | 41 | 309 | 7.30e-93 | 285 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0961670 | G7KM25 | 96.961 | 362 | 10 | 1 | 1 | 361 | 1 | 362 | 0.0 | 738 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0961670 | Msa0996380 | 0.805650 | 1.205094e-49 | -8.615850e-47 |
| Msa0961670 | Msa1107200 | 0.801114 | 1.049001e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0961670 | MtrunA17_Chr6g0481291 | 96.961 | 362 | 10 | 1 | 1 | 361 | 1 | 362 | 0.0 | 738 |
| Msa0961670 | MtrunA17_Chr1g0162921 | 51.205 | 332 | 153 | 3 | 36 | 360 | 47 | 376 | 8.05e-125 | 364 |
| Msa0961670 | MtrunA17_Chr1g0210841 | 55.903 | 288 | 123 | 2 | 73 | 360 | 64 | 347 | 1.84e-122 | 357 |
| Msa0961670 | MtrunA17_Chr1g0168191 | 42.545 | 275 | 148 | 4 | 78 | 343 | 58 | 331 | 1.39e-69 | 222 |
| Msa0961670 | MtrunA17_Chr8g0335991 | 37.952 | 332 | 182 | 7 | 48 | 360 | 20 | 346 | 4.90e-68 | 218 |
| Msa0961670 | MtrunA17_Chr7g0225581 | 32.721 | 272 | 177 | 5 | 93 | 360 | 1 | 270 | 1.13e-47 | 162 |
| Msa0961670 | MtrunA17_Chr7g0225571 | 32.117 | 274 | 175 | 7 | 93 | 360 | 1 | 269 | 7.42e-44 | 152 |
| Msa0961670 | MtrunA17_Chr8g0336021 | 41.429 | 140 | 80 | 1 | 205 | 342 | 1 | 140 | 2.62e-32 | 119 |
| Msa0961670 | MtrunA17_Chr8g0336001 | 37.654 | 162 | 99 | 1 | 201 | 360 | 3 | 164 | 8.74e-31 | 115 |
| Msa0961670 | MtrunA17_Chr8g0336011 | 38.554 | 166 | 86 | 5 | 50 | 200 | 22 | 186 | 6.23e-26 | 103 |
| Msa0961670 | MtrunA17_Chr8g0336031 | 39.844 | 128 | 69 | 3 | 80 | 200 | 57 | 183 | 1.92e-23 | 95.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0961670 | AT1G14590.1 | 48.169 | 355 | 171 | 5 | 7 | 360 | 18 | 360 | 9.53e-123 | 359 |
| Msa0961670 | AT2G02061.2 | 57.246 | 276 | 116 | 2 | 87 | 361 | 111 | 385 | 3.43e-119 | 350 |
| Msa0961670 | AT2G02061.1 | 57.091 | 275 | 116 | 2 | 87 | 360 | 111 | 384 | 2.08e-118 | 349 |
| Msa0961670 | AT4G19975.1 | 49.555 | 337 | 152 | 4 | 33 | 360 | 26 | 353 | 4.66e-117 | 343 |
| Msa0961670 | AT5G44820.1 | 47.159 | 352 | 168 | 5 | 23 | 360 | 17 | 364 | 1.72e-113 | 335 |
| Msa0961670 | AT4G19970.1 | 43.068 | 339 | 177 | 6 | 34 | 360 | 41 | 375 | 2.18e-98 | 296 |
| Msa0961670 | AT4G15970.1 | 50.896 | 279 | 126 | 4 | 83 | 360 | 32 | 300 | 2.41e-94 | 286 |
| Msa0961670 | AT1G28700.1 | 38.411 | 302 | 168 | 7 | 67 | 361 | 36 | 326 | 2.48e-61 | 200 |
| Msa0961670 | AT1G28695.1 | 39.068 | 279 | 159 | 5 | 69 | 341 | 30 | 303 | 9.11e-60 | 196 |
| Msa0961670 | AT1G28710.1 | 37.329 | 292 | 170 | 6 | 59 | 341 | 27 | 314 | 1.80e-58 | 193 |
| Msa0961670 | AT1G28710.4 | 37.329 | 292 | 170 | 6 | 59 | 341 | 27 | 314 | 1.80e-58 | 193 |
| Msa0961670 | AT1G28710.3 | 37.329 | 292 | 170 | 6 | 59 | 341 | 27 | 314 | 1.80e-58 | 193 |
| Msa0961670 | AT5G40900.1 | 34.615 | 286 | 159 | 7 | 84 | 361 | 57 | 322 | 1.02e-46 | 162 |
Find 64 sgRNAs with CRISPR-Local
Find 358 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATTTGGTTCTACAAATTT+TGG | 0.142477 | 6_3:+83863265 | Msa0961670:CDS |
| AAGCTTCTTATTTGTAATTA+AGG | 0.172101 | 6_3:-83863355 | None:intergenic |
| TGAAATAATCACAAGCAATT+TGG | 0.182799 | 6_3:-83863173 | None:intergenic |
| TTCTTAAGCACAAGCTATTT+TGG | 0.185065 | 6_3:+83863387 | Msa0961670:CDS |
| GAGAAAATTCACACCCTTCT+TGG | 0.198155 | 6_3:+83863553 | Msa0961670:CDS |
| TCTTGGAGCTGTTCTTCATT+TGG | 0.226484 | 6_3:+83862151 | Msa0961670:CDS |
| TGTCAATCTAGCAAGGATTT+TGG | 0.246249 | 6_3:+83863417 | Msa0961670:CDS |
| CTTGGAGCTGTTCTTCATTT+GGG | 0.255905 | 6_3:+83862152 | Msa0961670:CDS |
| TTGTAGAACCAAATTGTTCT+TGG | 0.269685 | 6_3:-83863258 | None:intergenic |
| TGGAGAAGAATTGAATTTCT+TGG | 0.276601 | 6_3:+83862134 | Msa0961670:CDS |
| AAAACAAAGGGAATTGGAAT+TGG | 0.303312 | 6_3:-83855594 | None:intergenic |
| AATCAAATCCAAGAACAATT+TGG | 0.309827 | 6_3:+83863250 | Msa0961670:CDS |
| AACAATTCTGCTTCTCCATT+TGG | 0.318301 | 6_3:+83856033 | Msa0961670:CDS |
| AGCTTCTTATTTGTAATTAA+GGG | 0.327364 | 6_3:-83863354 | None:intergenic |
| ATTGCTTGTGATTATTTCAA+TGG | 0.335617 | 6_3:+83863177 | Msa0961670:CDS |
| GTTGTTTGTTTGGTACTCTT+TGG | 0.338268 | 6_3:-83855656 | None:intergenic |
| AAAGTTTGAGGTTGTTTGTT+TGG | 0.339870 | 6_3:-83855666 | None:intergenic |
| CAAATAAGAAGCTTAAGATT+AGG | 0.357408 | 6_3:+83863364 | Msa0961670:CDS |
| TGGATAGTTGTGCATGTCAT+AGG | 0.363415 | 6_3:-83863205 | None:intergenic |
| CCATGACTTGTTTCCTTCTC+CGG | 0.367055 | 6_3:-83855914 | None:intergenic |
| TTAAGAACACTCTTTAGCTT+TGG | 0.370284 | 6_3:-83861837 | None:intergenic |
| TGCTAATTGTTGTGTTGGCT+TGG | 0.407831 | 6_3:+83863458 | Msa0961670:CDS |
| AACAAGTCATGGAAGTCAAT+TGG | 0.409262 | 6_3:+83855925 | Msa0961670:CDS |
| ACATATGTGAATCCTCCATT+TGG | 0.413713 | 6_3:-83863225 | None:intergenic |
| AAACAAAGGGAATTGGAATT+GGG | 0.421877 | 6_3:-83855593 | None:intergenic |
| GGGATATAGCTTTGTGTTCA+CGG | 0.424554 | 6_3:+83862172 | Msa0961670:CDS |
| TGAGGATTGGAAGAAGTATA+TGG | 0.432395 | 6_3:+83863512 | Msa0961670:CDS |
| CCTCAAACTTTGTTTATACT+AGG | 0.433343 | 6_3:+83855678 | Msa0961670:five_prime_UTR |
| GAACCAAACACAAAAGCTAT+TGG | 0.435864 | 6_3:+83861968 | Msa0961670:CDS |
| AAAGTTTGTATAAAGAGAAA+CGG | 0.438035 | 6_3:-83855570 | None:intergenic |
| AAGTTTGTATAAAGAGAAAC+GGG | 0.439700 | 6_3:-83855569 | None:intergenic |
| TCTTTGTAAAATTGTTTGAA+TGG | 0.440475 | 6_3:-83863141 | None:intergenic |
| TCATGGAAGTCAATTGGAAC+AGG | 0.450424 | 6_3:+83855931 | Msa0961670:CDS |
| CACATCATGTGTAAGTAAGT+TGG | 0.451113 | 6_3:-83862113 | None:intergenic |
| TATCACCTTTAGTTTGAAGT+TGG | 0.453462 | 6_3:-83862061 | None:intergenic |
| ATAGTAGCAGGAAGACCAAA+TGG | 0.455118 | 6_3:-83856048 | None:intergenic |
| AAGTAATGTGAGATAGTAGC+AGG | 0.464851 | 6_3:-83856060 | None:intergenic |
| TGTTACCAACTTCAAACTAA+AGG | 0.466478 | 6_3:+83862056 | Msa0961670:CDS |
| ACATCTTGATCATGCATAGT+TGG | 0.467730 | 6_3:-83863309 | None:intergenic |
| ACTATCTCACATTACTTCAA+TGG | 0.475598 | 6_3:+83856066 | Msa0961670:CDS |
| GACATGCACAACTATCCAAA+TGG | 0.496279 | 6_3:+83863210 | Msa0961670:CDS |
| GGTGCCGTCGACAACGTTGC+CGG | 0.496623 | 6_3:+83855895 | Msa0961670:CDS |
| GTCGACAACGTTGCCGGAGA+AGG | 0.497094 | 6_3:+83855901 | Msa0961670:CDS |
| CCTAGTATAAACAAAGTTTG+AGG | 0.499988 | 6_3:-83855678 | None:intergenic |
| TTTGTTTGGTACTCTTTGGA+AGG | 0.509625 | 6_3:-83855652 | None:intergenic |
| ATGCATGCTAATTGTTGTGT+TGG | 0.526017 | 6_3:+83863453 | Msa0961670:CDS |
| TCTTAAACAAGCATCAATGA+AGG | 0.526752 | 6_3:+83861854 | Msa0961670:CDS |
| TTCTCCGGCAACGTTGTCGA+CGG | 0.528995 | 6_3:-83855899 | None:intergenic |
| AATTGATCAAATATTGAACC+TGG | 0.540784 | 6_3:-83861921 | None:intergenic |
| AAGAATCATTATGCTGCTGC+TGG | 0.552708 | 6_3:+83855874 | Msa0961670:CDS |
| TCACCACATTGAATGATGCA+TGG | 0.575011 | 6_3:+83861892 | Msa0961670:CDS |
| CAACTTACTTACACATGATG+TGG | 0.575631 | 6_3:+83862114 | Msa0961670:CDS |
| ATCATCTTGTGGTAATAACA+TGG | 0.577012 | 6_3:+83861991 | Msa0961670:CDS |
| CACCACATTGAATGATGCAT+GGG | 0.590967 | 6_3:+83861893 | Msa0961670:CDS |
| CTTAAACAAGCATCAATGAA+GGG | 0.599814 | 6_3:+83861855 | Msa0961670:CDS |
| AAAGCTATTGGATCATCTTG+TGG | 0.607279 | 6_3:+83861980 | Msa0961670:CDS |
| AATGATGCATGGGCTGAACC+AGG | 0.607742 | 6_3:+83861903 | Msa0961670:CDS |
| TTGTGTTGGCTTGGAGAACA+AGG | 0.616497 | 6_3:+83863467 | Msa0961670:CDS |
| CCGGAGAAGGAAACAAGTCA+TGG | 0.624200 | 6_3:+83855914 | Msa0961670:CDS |
| TGCAGGACACTGATATAATG+TGG | 0.636069 | 6_3:+83863109 | Msa0961670:intron |
| TCATCTTGTGGTAATAACAT+GGG | 0.641239 | 6_3:+83861992 | Msa0961670:CDS |
| AGATACATACACCTTAGTGT+TGG | 0.644220 | 6_3:+83855736 | Msa0961670:five_prime_UTR |
| ATGCACAACTATCCAAATGG+AGG | 0.677945 | 6_3:+83863213 | Msa0961670:CDS |
| AGCCCATGCATCATTCAATG+TGG | 0.718468 | 6_3:-83861895 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAAAAAATAAATTTTATAT+TGG | - | chr6_3:83859185-83859204 | None:intergenic | 0.0% |
| !!! | TATTTTCTCAATTTTAATTT+TGG | + | chr6_3:83856989-83857008 | Msa0961670:intron | 10.0% |
| !!! | ATTTAATTAGTCTATAAAAA+AGG | + | chr6_3:83857281-83857300 | Msa0961670:intron | 10.0% |
| !!! | ATTTTTTTTGAATCTATTAA+AGG | + | chr6_3:83857336-83857355 | Msa0961670:intron | 10.0% |
| !!! | TTTTATTTTTAAAAATCATG+GGG | - | chr6_3:83859269-83859288 | None:intergenic | 10.0% |
| !!! | ATTTTATGTAAAAAAATTTG+AGG | + | chr6_3:83859513-83859532 | Msa0961670:intron | 10.0% |
| !!! | TTTTATGTAAAAAAATTTGA+GGG | + | chr6_3:83859514-83859533 | Msa0961670:intron | 10.0% |
| !! | CATCAAAATAAAATAAAAAT+TGG | + | chr6_3:83859627-83859646 | Msa0961670:intron | 10.0% |
| !! | CTGTTATTATATTATTATAT+TGG | - | chr6_3:83859752-83859771 | None:intergenic | 10.0% |
| !!! | CAAAAAAAAAAATATTTTAG+AGG | - | chr6_3:83860010-83860029 | None:intergenic | 10.0% |
| !!! | AGTTTTTAATAATATTTTAG+AGG | - | chr6_3:83860039-83860058 | None:intergenic | 10.0% |
| !!! | TGTATTTTTACATTTTTTTA+AGG | + | chr6_3:83860150-83860169 | Msa0961670:intron | 10.0% |
| !!! | AATATATTAATTTCACTTTT+TGG | + | chr6_3:83860679-83860698 | Msa0961670:intron | 10.0% |
| !!! | ATTTTTGATATATAATATAG+TGG | + | chr6_3:83860754-83860773 | Msa0961670:intron | 10.0% |
| !!! | TTTTTGATATATAATATAGT+GGG | + | chr6_3:83860755-83860774 | Msa0961670:intron | 10.0% |
| !!! | AATCAAAAAGTTGATTTTTT+TGG | + | chr6_3:83856214-83856233 | Msa0961670:intron | 15.0% |
| !!! | ATCAAAAAGTTGATTTTTTT+GGG | + | chr6_3:83856215-83856234 | Msa0961670:intron | 15.0% |
| !!! | AAAAAATTCAACTTTTTGAA+TGG | - | chr6_3:83856265-83856284 | None:intergenic | 15.0% |
| !!! | TTAATTTTGTGTTATTTTTG+TGG | + | chr6_3:83856283-83856302 | Msa0961670:intron | 15.0% |
| !!! | AAGAAATTCAACTTTTTAAT+TGG | - | chr6_3:83856311-83856330 | None:intergenic | 15.0% |
| !!! | TCAATTTTAATTTTGGATTT+TGG | + | chr6_3:83856996-83857015 | Msa0961670:intron | 15.0% |
| !! | TCAAGGAATATTATAAAAAT+GGG | - | chr6_3:83857069-83857088 | None:intergenic | 15.0% |
| !! | TTCAAGGAATATTATAAAAA+TGG | - | chr6_3:83857070-83857089 | None:intergenic | 15.0% |
| !!! | TAAAATAGTTTTAGTGAAAA+AGG | + | chr6_3:83857217-83857236 | Msa0961670:intron | 15.0% |
| !! | AATTAATGTTGTGATAATTT+AGG | - | chr6_3:83857421-83857440 | None:intergenic | 15.0% |
| !! | GCAAAACAAAAAAATTATAA+AGG | + | chr6_3:83858267-83858286 | Msa0961670:intron | 15.0% |
| !! | AAACAAGAATTCATATTATT+AGG | - | chr6_3:83858901-83858920 | None:intergenic | 15.0% |
| !!! | AATAATATGAATTCTTGTTT+AGG | + | chr6_3:83858901-83858920 | Msa0961670:intron | 15.0% |
| !!! | ATAATATGAATTCTTGTTTA+GGG | + | chr6_3:83858902-83858921 | Msa0961670:intron | 15.0% |
| !!! | ATCAATTACAAACAAAATTT+TGG | + | chr6_3:83859415-83859434 | Msa0961670:intron | 15.0% |
| !! | TCATCATAATTATTTACTAT+TGG | + | chr6_3:83860337-83860356 | Msa0961670:intron | 15.0% |
| !!! | ACATTTATTAACCTTTTAAT+CGG | - | chr6_3:83860580-83860599 | None:intergenic | 15.0% |
| !!! | TTTCAAATCAGAATAAATTT+TGG | + | chr6_3:83861543-83861562 | Msa0961670:intron | 15.0% |
| !!! | TTTTAGAAAAAGTTATGAAT+TGG | - | chr6_3:83861663-83861682 | None:intergenic | 15.0% |
| !! | TATCAAATGTTTCATTATAT+GGG | + | chr6_3:83862328-83862347 | Msa0961670:intron | 15.0% |
| !!! | ATAAGTTTTGATATATCTAT+AGG | + | chr6_3:83862577-83862596 | Msa0961670:intron | 15.0% |
| !! | TATATCAATTTATATTGTGA+AGG | + | chr6_3:83862974-83862993 | Msa0961670:intron | 15.0% |
| !! | ATATCAATTTATATTGTGAA+GGG | + | chr6_3:83862975-83862994 | Msa0961670:intron | 15.0% |
| !! | AAAGTTTGTATAAAGAGAAA+CGG | - | chr6_3:83855573-83855592 | None:intergenic | 20.0% |
| !! | AAAAAAAAAACAAAGGGAAT+TGG | - | chr6_3:83855603-83855622 | None:intergenic | 20.0% |
| !! | ATGAGGAAAAAAAAAACAAA+GGG | - | chr6_3:83855609-83855628 | None:intergenic | 20.0% |
| !!! | TGATTTGCAATTATAATTCT+GGG | + | chr6_3:83856168-83856187 | Msa0961670:intron | 20.0% |
| !! | TTGATTGATCAATAAAAAGA+AGG | + | chr6_3:83856701-83856720 | Msa0961670:intron | 20.0% |
| !! | TGATAAAATTGAAGAGAAAT+TGG | + | chr6_3:83856783-83856802 | Msa0961670:intron | 20.0% |
| !! | AAAAAATATCAATTGATGCA+GGG | - | chr6_3:83857742-83857761 | None:intergenic | 20.0% |
| !! | TAAACGTAAAATGACATAAA+AGG | + | chr6_3:83857949-83857968 | Msa0961670:intron | 20.0% |
| !! | ATATAAATAATAATCTCTGC+AGG | - | chr6_3:83858114-83858133 | None:intergenic | 20.0% |
| !! | TATAAGCTATAAAGTGATAA+GGG | + | chr6_3:83858313-83858332 | Msa0961670:intron | 20.0% |
| !!! | GAAAATAATTTTGTAGCATA+TGG | - | chr6_3:83858605-83858624 | None:intergenic | 20.0% |
| !!! | ATTACAAACAAAATTTTGGA+AGG | + | chr6_3:83859419-83859438 | Msa0961670:intron | 20.0% |
| !! | TCAGATAAGTATATATGAAA+AGG | - | chr6_3:83859582-83859601 | None:intergenic | 20.0% |
| !!! | AAATTATTTAAAATGACCTG+TGG | + | chr6_3:83859836-83859855 | Msa0961670:intron | 20.0% |
| !! | AAATGTAAAAATACAAGTTG+AGG | - | chr6_3:83860145-83860164 | None:intergenic | 20.0% |
| !! | ATAGATGAAAATAATTGTGT+TGG | + | chr6_3:83860399-83860418 | Msa0961670:intron | 20.0% |
| !!! | AATTTGAATTCTTAAGTTGT+TGG | + | chr6_3:83860604-83860623 | Msa0961670:intron | 20.0% |
| !! | CTATATATAGAAATATAGAG+TGG | - | chr6_3:83860875-83860894 | None:intergenic | 20.0% |
| !!! | CACTCTATATTTCTATATAT+AGG | + | chr6_3:83860873-83860892 | Msa0961670:intron | 20.0% |
| !!! | AATTGTACATGAATTTTTAG+TGG | - | chr6_3:83860937-83860956 | None:intergenic | 20.0% |
| !! | CTCAATTAATATGAATATGA+TGG | + | chr6_3:83861047-83861066 | Msa0961670:intron | 20.0% |
| !! | AAATTCATGACATCAAAAAA+TGG | - | chr6_3:83861155-83861174 | None:intergenic | 20.0% |
| !!! | TTTTTGCTTTGTTTGATTAT+TGG | + | chr6_3:83861278-83861297 | Msa0961670:intron | 20.0% |
| !!! | TGTTTGATTATTGGTAATTT+AGG | + | chr6_3:83861287-83861306 | Msa0961670:intron | 20.0% |
| !!! | AACTTTTTCTAAAATCACAA+CGG | + | chr6_3:83861669-83861688 | Msa0961670:intron | 20.0% |
| !! | CTATCAAATGTTTCATTATA+TGG | + | chr6_3:83862327-83862346 | Msa0961670:intron | 20.0% |
| !! | ATCAAATGTTTCATTATATG+GGG | + | chr6_3:83862329-83862348 | Msa0961670:intron | 20.0% |
| !!! | TTTGATTATCTTTTGAAACA+CGG | + | chr6_3:83862367-83862386 | Msa0961670:intron | 20.0% |
| !!! | TCTTTTTCTCAAATTGTTAT+CGG | - | chr6_3:83862421-83862440 | None:intergenic | 20.0% |
| !! | TTCAATGTAATTATATGTGT+TGG | + | chr6_3:83862446-83862465 | Msa0961670:intron | 20.0% |
| !!! | TCATTTTATAAGCTCTTTAA+AGG | - | chr6_3:83862925-83862944 | None:intergenic | 20.0% |
| !! | TATCAATTTATATTGTGAAG+GGG | + | chr6_3:83862976-83862995 | Msa0961670:intron | 20.0% |
| !! | TCTTTGTAAAATTGTTTGAA+TGG | - | chr6_3:83863144-83863163 | None:intergenic | 20.0% |
| !!! | AGCTTCTTATTTGTAATTAA+GGG | - | chr6_3:83863357-83863376 | None:intergenic | 20.0% |
| !!! | AAGCTTCTTATTTGTAATTA+AGG | - | chr6_3:83863358-83863377 | None:intergenic | 20.0% |
| ! | AAGTTTGTATAAAGAGAAAC+GGG | - | chr6_3:83855572-83855591 | None:intergenic | 25.0% |
| ! | GATGAGGAAAAAAAAAACAA+AGG | - | chr6_3:83855610-83855629 | None:intergenic | 25.0% |
| !! | TTTTTGTGACACAACAATTA+AGG | + | chr6_3:83855838-83855857 | Msa0961670:five_prime_UTR | 25.0% |
| !! | GTGATTTGCAATTATAATTC+TGG | + | chr6_3:83856167-83856186 | Msa0961670:intron | 25.0% |
| !!! | GTTGAATTTCTTGTTTTTGA+TGG | + | chr6_3:83856319-83856338 | Msa0961670:intron | 25.0% |
| !! | ATGATGATGTGTATAATAGT+AGG | + | chr6_3:83856621-83856640 | Msa0961670:intron | 25.0% |
| !! | GATAAGAAGATTCATTGATT+TGG | + | chr6_3:83856823-83856842 | Msa0961670:intron | 25.0% |
| !! | TGATTTGGAATGAGAAAATA+AGG | + | chr6_3:83856838-83856857 | Msa0961670:intron | 25.0% |
| !! | GATTTGGAATGAGAAAATAA+GGG | + | chr6_3:83856839-83856858 | Msa0961670:intron | 25.0% |
| ! | TATTCCTTGAAGTATAGAAT+TGG | + | chr6_3:83857079-83857098 | Msa0961670:intron | 25.0% |
| ! | TATACCAATTCTATACTTCA+AGG | - | chr6_3:83857086-83857105 | None:intergenic | 25.0% |
| !!! | CATAAGTTTTTGTTTTTGAG+AGG | + | chr6_3:83857122-83857141 | Msa0961670:intron | 25.0% |
| ! | TCAGACAAAAATCATTTGAT+CGG | + | chr6_3:83857573-83857592 | Msa0961670:intron | 25.0% |
| !!! | TATTAAGGTTAAAAGTGTCA+CGG | - | chr6_3:83857609-83857628 | None:intergenic | 25.0% |
| ! | GAAAAAATATCAATTGATGC+AGG | - | chr6_3:83857743-83857762 | None:intergenic | 25.0% |
| !! | TGTTGTTTATGTAAGAAAGA+AGG | + | chr6_3:83858290-83858309 | Msa0961670:intron | 25.0% |
| ! | GTATAAGCTATAAAGTGATA+AGG | + | chr6_3:83858312-83858331 | Msa0961670:intron | 25.0% |
| !! | TAAAAGCTAAAAGCTCTTTT+TGG | + | chr6_3:83858502-83858521 | Msa0961670:intron | 25.0% |
| !! | TAATTTTGTAGCATATGGTT+AGG | - | chr6_3:83858600-83858619 | None:intergenic | 25.0% |
| ! | CAAAAGAATAAGATGTTTGA+TGG | + | chr6_3:83858658-83858677 | Msa0961670:intron | 25.0% |
| ! | AATTGAATAACATGTGTTAC+AGG | - | chr6_3:83859210-83859229 | None:intergenic | 25.0% |
| ! | ATTCATTATTCATGCATATG+TGG | + | chr6_3:83859227-83859246 | Msa0961670:intron | 25.0% |
| ! | TTCATTATTCATGCATATGT+GGG | + | chr6_3:83859228-83859247 | Msa0961670:intron | 25.0% |
| ! | TTTAAAAATCATGGGGATTT+AGG | - | chr6_3:83859262-83859281 | None:intergenic | 25.0% |
| !! | GTGTTCTTCTTTCTAATTTT+TGG | + | chr6_3:83859342-83859361 | Msa0961670:intron | 25.0% |
| !! | TGGAAGGAAAAAAAAACTTT+TGG | + | chr6_3:83859435-83859454 | Msa0961670:intron | 25.0% |
| ! | TAAAATTCTGAGTTTGAATC+TGG | + | chr6_3:83859548-83859567 | Msa0961670:intron | 25.0% |
| ! | AAAATTCTGAGTTTGAATCT+GGG | + | chr6_3:83859549-83859568 | Msa0961670:intron | 25.0% |
| !!! | TTATTTTGATGTTAGTCTAG+TGG | - | chr6_3:83859618-83859637 | None:intergenic | 25.0% |
| ! | AAATTATATATGTTAGCACG+TGG | - | chr6_3:83860211-83860230 | None:intergenic | 25.0% |
| ! | ATTATGATGAAAGAACAATG+TGG | - | chr6_3:83860327-83860346 | None:intergenic | 25.0% |
| ! | AATGATTGTTGGATTGAAAT+TGG | + | chr6_3:83860464-83860483 | Msa0961670:intron | 25.0% |
| ! | ACCATAAAACTAACTATAGA+AGG | + | chr6_3:83860655-83860674 | Msa0961670:intron | 25.0% |
| ! | AAAAAGGATAGTAGACATTA+TGG | - | chr6_3:83860732-83860751 | None:intergenic | 25.0% |
| !! | GATATATAATATAGTGGGAA+AGG | + | chr6_3:83860760-83860779 | Msa0961670:intron | 25.0% |
| !! | ATAAAGGGATATATTTTCCT+AGG | + | chr6_3:83860784-83860803 | Msa0961670:intron | 25.0% |
| ! | ATTTCTATATATAGGCTCAT+AGG | + | chr6_3:83860881-83860900 | Msa0961670:intron | 25.0% |
| ! | CATTTACTTATATACACAAG+TGG | - | chr6_3:83860983-83861002 | None:intergenic | 25.0% |
| ! | CACTTGTGTATATAAGTAAA+TGG | + | chr6_3:83860981-83861000 | Msa0961670:intron | 25.0% |
| ! | TTGTGTATATAAGTAAATGG+AGG | + | chr6_3:83860984-83861003 | Msa0961670:intron | 25.0% |
| ! | TGTGTATATAAGTAAATGGA+GGG | + | chr6_3:83860985-83861004 | Msa0961670:intron | 25.0% |
| !!! | GTTATTGACTTCAAATTTGA+TGG | + | chr6_3:83861073-83861092 | Msa0961670:intron | 25.0% |
| !! | TTTTGCACATCTTTTCTTTT+TGG | + | chr6_3:83861108-83861127 | Msa0961670:intron | 25.0% |
| ! | TCAAAAAATGGTTAGGATTT+AGG | - | chr6_3:83861143-83861162 | None:intergenic | 25.0% |
| !!! | GATGTCATGAATTTTAACAA+AGG | + | chr6_3:83861161-83861180 | Msa0961670:intron | 25.0% |
| !!! | CATGAATTTTAACAAAGGAT+TGG | + | chr6_3:83861166-83861185 | Msa0961670:intron | 25.0% |
| !! | TGATTATTGGTAATTTAGGT+TGG | + | chr6_3:83861291-83861310 | Msa0961670:intron | 25.0% |
| ! | TGATGCATAAAAAATTGTGA+TGG | + | chr6_3:83861328-83861347 | Msa0961670:intron | 25.0% |
| ! | CAGTTGTATATTTGAATTAG+CGG | - | chr6_3:83861719-83861738 | None:intergenic | 25.0% |
| ! | AATTGATCAAATATTGAACC+TGG | - | chr6_3:83861924-83861943 | None:intergenic | 25.0% |
| !! | TTTCTTGAGAGTTTTCAAAT+TGG | + | chr6_3:83861942-83861961 | Msa0961670:CDS | 25.0% |
| ! | ATTCTTAGTTACTTGTGTAA+GGG | + | chr6_3:83862274-83862293 | Msa0961670:intron | 25.0% |
| ! | GATGATTATCTACACATAAA+AGG | - | chr6_3:83862624-83862643 | None:intergenic | 25.0% |
| !! | TTTATAAGCTCTTTAAAGGA+TGG | - | chr6_3:83862921-83862940 | None:intergenic | 25.0% |
| ! | TGACATTTCACATTTATAAC+AGG | + | chr6_3:83863023-83863042 | Msa0961670:intron | 25.0% |
| ! | AAATTACAATGTGTCAATTG+TGG | - | chr6_3:83863055-83863074 | None:intergenic | 25.0% |
| !!! | TAATTTGTTTTTTCCTTTGC+AGG | + | chr6_3:83863092-83863111 | Msa0961670:intron | 25.0% |
| ! | TGAAATAATCACAAGCAATT+TGG | - | chr6_3:83863176-83863195 | None:intergenic | 25.0% |
| ! | ATTGCTTGTGATTATTTCAA+TGG | + | chr6_3:83863177-83863196 | Msa0961670:CDS | 25.0% |
| ! | AATCAAATCCAAGAACAATT+TGG | + | chr6_3:83863250-83863269 | Msa0961670:CDS | 25.0% |
| !!! | CAATTTGGTTCTACAAATTT+TGG | + | chr6_3:83863265-83863284 | Msa0961670:CDS | 25.0% |
| ! | CAAATAAGAAGCTTAAGATT+AGG | + | chr6_3:83863364-83863383 | Msa0961670:CDS | 25.0% |
| AAACAAAGGGAATTGGAATT+GGG | - | chr6_3:83855596-83855615 | None:intergenic | 30.0% | |
| AAAACAAAGGGAATTGGAAT+TGG | - | chr6_3:83855597-83855616 | None:intergenic | 30.0% | |
| !! | ACATGATTTTCAAGATGATG+AGG | - | chr6_3:83855626-83855645 | None:intergenic | 30.0% |
| ! | AAAGTTTGAGGTTGTTTGTT+TGG | - | chr6_3:83855669-83855688 | None:intergenic | 30.0% |
| CCTAGTATAAACAAAGTTTG+AGG | - | chr6_3:83855681-83855700 | None:intergenic | 30.0% | |
| ! | CCTCAAACTTTGTTTATACT+AGG | + | chr6_3:83855678-83855697 | Msa0961670:five_prime_UTR | 30.0% |
| ACTATCTCACATTACTTCAA+TGG | + | chr6_3:83856066-83856085 | Msa0961670:CDS | 30.0% | |
| !! | TTGACTTGGAGAATCAAAAT+TGG | - | chr6_3:83856378-83856397 | None:intergenic | 30.0% |
| ! | TTTTCTGTTCATGTTTGACT+TGG | - | chr6_3:83856392-83856411 | None:intergenic | 30.0% |
| !! | ACATCATAAACCGATTTTGT+CGG | + | chr6_3:83856512-83856531 | Msa0961670:intron | 30.0% |
| !!! | TGCCTATTTTGTTTTTTGAG+TGG | + | chr6_3:83856541-83856560 | Msa0961670:intron | 30.0% |
| CTCCACTCAAAAAACAAAAT+AGG | - | chr6_3:83856546-83856565 | None:intergenic | 30.0% | |
| ACACATCATCATCACTATTT+AGG | - | chr6_3:83856613-83856632 | None:intergenic | 30.0% | |
| ! | AATAAGGGCTAGTAGAAAAT+AGG | + | chr6_3:83856854-83856873 | Msa0961670:intron | 30.0% |
| TAGTAGAAAATAGGTACTAG+TGG | + | chr6_3:83856863-83856882 | Msa0961670:intron | 30.0% | |
| ! | AAAAGATTACGTTTGCTGAT+TGG | + | chr6_3:83856921-83856940 | Msa0961670:intron | 30.0% |
| ! | AAAGATTACGTTTGCTGATT+GGG | + | chr6_3:83856922-83856941 | Msa0961670:intron | 30.0% |
| AGGAAAATCATATGCAAGTT+GGG | + | chr6_3:83857142-83857161 | Msa0961670:intron | 30.0% | |
| ! | TGTGGATATGTTCACATTTT+AGG | - | chr6_3:83857803-83857822 | None:intergenic | 30.0% |
| AAAATGTGAACATATCCACA+AGG | + | chr6_3:83857803-83857822 | Msa0961670:intron | 30.0% | |
| ! | GAAGTGTTTGGTAAAATTAG+CGG | + | chr6_3:83857913-83857932 | Msa0961670:intron | 30.0% |
| TAAAGTGATAAGGGCAAAAA+TGG | + | chr6_3:83858322-83858341 | Msa0961670:intron | 30.0% | |
| TCATTATTCATGCATATGTG+GGG | + | chr6_3:83859229-83859248 | Msa0961670:intron | 30.0% | |
| CAGTATAAAAGTCATTCATG+TGG | + | chr6_3:83859769-83859788 | Msa0961670:intron | 30.0% | |
| !!! | TGGACCACATGTTATTTTAT+TGG | + | chr6_3:83859789-83859808 | Msa0961670:intron | 30.0% |
| GTCACCAATAAAATAACATG+TGG | - | chr6_3:83859796-83859815 | None:intergenic | 30.0% | |
| AACTTAAATCACAAAACCAC+AGG | - | chr6_3:83859855-83859874 | None:intergenic | 30.0% | |
| TTGCATGTTTGTGACAATAT+TGG | + | chr6_3:83860181-83860200 | Msa0961670:intron | 30.0% | |
| ! | GTTGACTCTATGAATAAAGT+GGG | - | chr6_3:83860439-83860458 | None:intergenic | 30.0% |
| !! | TGTTGACTCTATGAATAAAG+TGG | - | chr6_3:83860440-83860459 | None:intergenic | 30.0% |
| GTCAACACATAAATGATTGT+TGG | + | chr6_3:83860453-83860472 | Msa0961670:intron | 30.0% | |
| ATGTTCGTTGAATCGAAATT+AGG | - | chr6_3:83860546-83860565 | None:intergenic | 30.0% | |
| ! | CGATGTATTTACCGATTAAA+AGG | + | chr6_3:83860566-83860585 | Msa0961670:intron | 30.0% |
| !!! | GCCTTCTATAGTTAGTTTTA+TGG | - | chr6_3:83860659-83860678 | None:intergenic | 30.0% |
| ATAGTAGACATTATGGATCA+TGG | - | chr6_3:83860725-83860744 | None:intergenic | 30.0% | |
| ! | ATATAGTGGGAAAGGAATAA+AGG | + | chr6_3:83860768-83860787 | Msa0961670:intron | 30.0% |
| ! | TATAGTGGGAAAGGAATAAA+GGG | + | chr6_3:83860769-83860788 | Msa0961670:intron | 30.0% |
| CAAAGAATAATATCCTACCT+AGG | - | chr6_3:83860804-83860823 | None:intergenic | 30.0% | |
| AGGTAGGATATTATTCTTTG+AGG | + | chr6_3:83860804-83860823 | Msa0961670:intron | 30.0% | |
| TATATCACCATTATTGAGGA+TGG | - | chr6_3:83860833-83860852 | None:intergenic | 30.0% | |
| ACACTATATCACCATTATTG+AGG | - | chr6_3:83860837-83860856 | None:intergenic | 30.0% | |
| ! | TTTTTACCTCAAATAGCCTT+AGG | + | chr6_3:83860955-83860974 | Msa0961670:intron | 30.0% |
| GTGTATATAAGTAAATGGAG+GGG | + | chr6_3:83860986-83861005 | Msa0961670:intron | 30.0% | |
| TGTATATAAGTAAATGGAGG+GGG | + | chr6_3:83860987-83861006 | Msa0961670:intron | 30.0% | |
| AACATACAATAAACGCAAGA+TGG | - | chr6_3:83861018-83861037 | None:intergenic | 30.0% | |
| CATGACATCAAAAAATGGTT+AGG | - | chr6_3:83861150-83861169 | None:intergenic | 30.0% | |
| !!! | GAAGCTAGTTGCTATTTTTT+TGG | + | chr6_3:83861215-83861234 | Msa0961670:intron | 30.0% |
| !!! | TAGTTGCTATTTTTTTGGTG+TGG | + | chr6_3:83861220-83861239 | Msa0961670:intron | 30.0% |
| !!! | AGTTGCTATTTTTTTGGTGT+GGG | + | chr6_3:83861221-83861240 | Msa0961670:intron | 30.0% |
| !!! | CTTTAGTTTTACTTCACCAT+TGG | + | chr6_3:83861361-83861380 | Msa0961670:intron | 30.0% |
| GTCTTGTATGTTTATGTAAC+AGG | + | chr6_3:83861803-83861822 | Msa0961670:intron | 30.0% | |
| ! | TTAAGAACACTCTTTAGCTT+TGG | - | chr6_3:83861840-83861859 | None:intergenic | 30.0% |
| TCTTAAACAAGCATCAATGA+AGG | + | chr6_3:83861854-83861873 | Msa0961670:CDS | 30.0% | |
| CTTAAACAAGCATCAATGAA+GGG | + | chr6_3:83861855-83861874 | Msa0961670:CDS | 30.0% | |
| ! | TTGAGAGTTTTCAAATTGGT+GGG | + | chr6_3:83861946-83861965 | Msa0961670:CDS | 30.0% |
| ATCATCTTGTGGTAATAACA+TGG | + | chr6_3:83861991-83862010 | Msa0961670:CDS | 30.0% | |
| TCATCTTGTGGTAATAACAT+GGG | + | chr6_3:83861992-83862011 | Msa0961670:CDS | 30.0% | |
| TGTTACCAACTTCAAACTAA+AGG | + | chr6_3:83862056-83862075 | Msa0961670:CDS | 30.0% | |
| !! | TATCACCTTTAGTTTGAAGT+TGG | - | chr6_3:83862064-83862083 | None:intergenic | 30.0% |
| TGGAGAAGAATTGAATTTCT+TGG | + | chr6_3:83862134-83862153 | Msa0961670:CDS | 30.0% | |
| GATTCTTAGTTACTTGTGTA+AGG | + | chr6_3:83862273-83862292 | Msa0961670:intron | 30.0% | |
| TTCTTAGTTACTTGTGTAAG+GGG | + | chr6_3:83862275-83862294 | Msa0961670:intron | 30.0% | |
| TCATAGCTTATGTAGTTGTT+TGG | + | chr6_3:83862540-83862559 | Msa0961670:intron | 30.0% | |
| CATATATAGTTGAGCTTATC+TGG | - | chr6_3:83862698-83862717 | None:intergenic | 30.0% | |
| AAAAGAAGCAAAATCTGCAT+AGG | - | chr6_3:83862803-83862822 | None:intergenic | 30.0% | |
| TTGTAGAACCAAATTGTTCT+TGG | - | chr6_3:83863261-83863280 | None:intergenic | 30.0% | |
| ! | TTCTTAAGCACAAGCTATTT+TGG | + | chr6_3:83863387-83863406 | Msa0961670:CDS | 30.0% |
| ! | TGATCTTAAGATTTTGCTTG+AGG | + | chr6_3:83863494-83863513 | Msa0961670:CDS | 30.0% |
| ! | TTAAGATTTTGCTTGAGGAT+TGG | + | chr6_3:83863499-83863518 | Msa0961670:CDS | 30.0% |
| ! | GAATTTTCTCTCTTATCTTC+AGG | - | chr6_3:83863543-83863562 | None:intergenic | 30.0% |
| TTTGTTTGGTACTCTTTGGA+AGG | - | chr6_3:83855655-83855674 | None:intergenic | 35.0% | |
| GTTGTTTGTTTGGTACTCTT+TGG | - | chr6_3:83855659-83855678 | None:intergenic | 35.0% | |
| AGATACATACACCTTAGTGT+TGG | + | chr6_3:83855736-83855755 | Msa0961670:five_prime_UTR | 35.0% | |
| ! | TGTTTTCTTCACCAACACTA+AGG | - | chr6_3:83855750-83855769 | None:intergenic | 35.0% |
| AACAAGTCATGGAAGTCAAT+TGG | + | chr6_3:83855925-83855944 | Msa0961670:CDS | 35.0% | |
| !! | AAGCCATGTTTTTGTGAAGA+GGG | + | chr6_3:83855954-83855973 | Msa0961670:CDS | 35.0% |
| TAACCCTCTTCACAAAAACA+TGG | - | chr6_3:83855960-83855979 | None:intergenic | 35.0% | |
| !!! | TTGTTGCTTTTGCTGTGTTA+TGG | + | chr6_3:83855998-83856017 | Msa0961670:CDS | 35.0% |
| AACAATTCTGCTTCTCCATT+TGG | + | chr6_3:83856033-83856052 | Msa0961670:CDS | 35.0% | |
| AAGTAATGTGAGATAGTAGC+AGG | - | chr6_3:83856063-83856082 | None:intergenic | 35.0% | |
| ! | TGATGTCTGCTTTATTGTTG+TGG | + | chr6_3:83856351-83856370 | Msa0961670:intron | 35.0% |
| ! | GATGTCTGCTTTATTGTTGT+GGG | + | chr6_3:83856352-83856371 | Msa0961670:intron | 35.0% |
| !! | CATCATAAACCGATTTTGTC+GGG | + | chr6_3:83856513-83856532 | Msa0961670:intron | 35.0% |
| CATCATCATCACTATTTAGG+TGG | - | chr6_3:83856610-83856629 | None:intergenic | 35.0% | |
| !!! | TCTTTTTCAGCAGACTCTTA+AGG | + | chr6_3:83856952-83856971 | Msa0961670:intron | 35.0% |
| !!! | CTTTTTCAGCAGACTCTTAA+GGG | + | chr6_3:83856953-83856972 | Msa0961670:intron | 35.0% |
| !! | TTTTTCAGCAGACTCTTAAG+GGG | + | chr6_3:83856954-83856973 | Msa0961670:intron | 35.0% |
| !! | TTTTGGATTTTGGCACCATT+CGG | + | chr6_3:83857006-83857025 | Msa0961670:intron | 35.0% |
| GAGGAAAATCATATGCAAGT+TGG | + | chr6_3:83857141-83857160 | Msa0961670:intron | 35.0% | |
| ! | AATCATATGCAAGTTGGGAT+TGG | + | chr6_3:83857147-83857166 | Msa0961670:intron | 35.0% |
| ! | ATCATATGCAAGTTGGGATT+GGG | + | chr6_3:83857148-83857167 | Msa0961670:intron | 35.0% |
| !! | TTTCTAGAATGTGGGGAAAT+GGG | - | chr6_3:83857777-83857796 | None:intergenic | 35.0% |
| !! | TTAGGAGGTTTCTAGAATGT+GGG | - | chr6_3:83857785-83857804 | None:intergenic | 35.0% |
| !! | TTTAGGAGGTTTCTAGAATG+TGG | - | chr6_3:83857786-83857805 | None:intergenic | 35.0% |
| ! | GGATATGTTCACATTTTAGG+AGG | - | chr6_3:83857800-83857819 | None:intergenic | 35.0% |
| AACATATCCACAAGGAGAAT+AGG | + | chr6_3:83857811-83857830 | Msa0961670:intron | 35.0% | |
| ACGAGCTTATAGCTTATTTC+AGG | - | chr6_3:83858423-83858442 | None:intergenic | 35.0% | |
| TTGACAAAAACAGCTCTGTT+TGG | - | chr6_3:83858461-83858480 | None:intergenic | 35.0% | |
| ! | AAGCTAAAAGCTCTTTTTGG+TGG | + | chr6_3:83858505-83858524 | Msa0961670:intron | 35.0% |
| AGCATATGGTTAGGTTAAGT+AGG | - | chr6_3:83858591-83858610 | None:intergenic | 35.0% | |
| GTTCTTGCTTATGCATTAAG+AGG | - | chr6_3:83858799-83858818 | None:intergenic | 35.0% | |
| !! | TTCAGTCTTGAGTTGAGTTT+GGG | - | chr6_3:83858821-83858840 | None:intergenic | 35.0% |
| !! | TTTCAGTCTTGAGTTGAGTT+TGG | - | chr6_3:83858822-83858841 | None:intergenic | 35.0% |
| GAATTCATATTATTAGGCCC+CGG | - | chr6_3:83858895-83858914 | None:intergenic | 35.0% | |
| AAGACAGATAAATTGCTCAC+AGG | - | chr6_3:83859051-83859070 | None:intergenic | 35.0% | |
| CAGAGCTTAACAAGTGAAAA+TGG | - | chr6_3:83859701-83859720 | None:intergenic | 35.0% | |
| GTCAACCTTTAGTCTACATT+GGG | - | chr6_3:83860271-83860290 | None:intergenic | 35.0% | |
| AGTCAACCTTTAGTCTACAT+TGG | - | chr6_3:83860272-83860291 | None:intergenic | 35.0% | |
| AATGTAGACTAAAGGTTGAC+TGG | + | chr6_3:83860271-83860290 | Msa0961670:intron | 35.0% | |
| ! | AGGGATATATTTTCCTAGGT+AGG | + | chr6_3:83860788-83860807 | Msa0961670:intron | 35.0% |
| TACAATAAACGCAAGATGGT+TGG | - | chr6_3:83861014-83861033 | None:intergenic | 35.0% | |
| AATAACCAAACACACACCAA+TGG | - | chr6_3:83861380-83861399 | None:intergenic | 35.0% | |
| TAGAATCCATGTTGCATGTT+TGG | + | chr6_3:83861585-83861604 | Msa0961670:intron | 35.0% | |
| TTGGAGCTTCAACAAAATCA+AGG | - | chr6_3:83861644-83861663 | None:intergenic | 35.0% | |
| ATTTGAATTAGCGGTGTGTT+TGG | - | chr6_3:83861710-83861729 | None:intergenic | 35.0% | |
| ACAAGACATCATTAAGCACT+TGG | - | chr6_3:83861790-83861809 | None:intergenic | 35.0% | |
| ! | CTTGAGAGTTTTCAAATTGG+TGG | + | chr6_3:83861945-83861964 | Msa0961670:CDS | 35.0% |
| GAACCAAACACAAAAGCTAT+TGG | + | chr6_3:83861968-83861987 | Msa0961670:CDS | 35.0% | |
| ! | GATCCAATAGCTTTTGTGTT+TGG | - | chr6_3:83861974-83861993 | None:intergenic | 35.0% |
| AAAGCTATTGGATCATCTTG+TGG | + | chr6_3:83861980-83861999 | Msa0961670:CDS | 35.0% | |
| CACATCATGTGTAAGTAAGT+TGG | - | chr6_3:83862116-83862135 | None:intergenic | 35.0% | |
| CAACTTACTTACACATGATG+TGG | + | chr6_3:83862114-83862133 | Msa0961670:CDS | 35.0% | |
| !!! | TATCTTTTGAAACACGGACA+AGG | + | chr6_3:83862373-83862392 | Msa0961670:intron | 35.0% |
| TCTCAAATTGTTATCGGTGT+CGG | - | chr6_3:83862415-83862434 | None:intergenic | 35.0% | |
| ! | ACCAACACATGTCTAAAATC+AGG | + | chr6_3:83862488-83862507 | Msa0961670:intron | 35.0% |
| ! | TCCTGATTTTAGACATGTGT+TGG | - | chr6_3:83862492-83862511 | None:intergenic | 35.0% |
| ! | AGCTCTTTAAAGGATGGATT+TGG | - | chr6_3:83862915-83862934 | None:intergenic | 35.0% |
| GTCAAGATCCTCTAAACAAT+TGG | - | chr6_3:83863007-83863026 | None:intergenic | 35.0% | |
| ATTATATCAGTGTCCTGCAA+AGG | - | chr6_3:83863108-83863127 | None:intergenic | 35.0% | |
| ACATATGTGAATCCTCCATT+TGG | - | chr6_3:83863228-83863247 | None:intergenic | 35.0% | |
| ACATCTTGATCATGCATAGT+TGG | - | chr6_3:83863312-83863331 | None:intergenic | 35.0% | |
| !! | TTAAGCACAAGCTATTTTGG+AGG | + | chr6_3:83863390-83863409 | Msa0961670:CDS | 35.0% |
| !! | TAAGCACAAGCTATTTTGGA+GGG | + | chr6_3:83863391-83863410 | Msa0961670:CDS | 35.0% |
| ! | TGTCAATCTAGCAAGGATTT+TGG | + | chr6_3:83863417-83863436 | Msa0961670:CDS | 35.0% |
| ATGCATGCTAATTGTTGTGT+TGG | + | chr6_3:83863453-83863472 | Msa0961670:CDS | 35.0% | |
| ! | TGAGGATTGGAAGAAGTATA+TGG | + | chr6_3:83863512-83863531 | Msa0961670:CDS | 35.0% |
| AAGAATCATTATGCTGCTGC+TGG | + | chr6_3:83855874-83855893 | Msa0961670:CDS | 40.0% | |
| TCATGGAAGTCAATTGGAAC+AGG | + | chr6_3:83855931-83855950 | Msa0961670:CDS | 40.0% | |
| !! | GAAGCCATGTTTTTGTGAAG+AGG | + | chr6_3:83855953-83855972 | Msa0961670:CDS | 40.0% |
| ATAGTAGCAGGAAGACCAAA+TGG | - | chr6_3:83856051-83856070 | None:intergenic | 40.0% | |
| CATCATCACTATTTAGGTGG+AGG | - | chr6_3:83856607-83856626 | None:intergenic | 40.0% | |
| ! | TCATATGCAAGTTGGGATTG+GGG | + | chr6_3:83857149-83857168 | Msa0961670:intron | 40.0% |
| ACTCAACACGTTGGAAACAA+CGG | - | chr6_3:83857705-83857724 | None:intergenic | 40.0% | |
| !! | TTCTAGAATGTGGGGAAATG+GGG | - | chr6_3:83857776-83857795 | None:intergenic | 40.0% |
| !! | GTTTCTAGAATGTGGGGAAA+TGG | - | chr6_3:83857778-83857797 | None:intergenic | 40.0% |
| !! | TAGGAGGTTTCTAGAATGTG+GGG | - | chr6_3:83857784-83857803 | None:intergenic | 40.0% |
| TGTATCTCCTATTCTCCTTG+TGG | - | chr6_3:83857821-83857840 | None:intergenic | 40.0% | |
| GGAGAATAGGAGATACATGA+AGG | + | chr6_3:83857824-83857843 | Msa0961670:intron | 40.0% | |
| AGATACATGAAGGCTCTGTT+TGG | + | chr6_3:83857834-83857853 | Msa0961670:intron | 40.0% | |
| ! | GATAAGCTAGCTGAAGTGTT+TGG | + | chr6_3:83857901-83857920 | Msa0961670:intron | 40.0% |
| TGAACTGCGTATCAAAAAGC+AGG | + | chr6_3:83858718-83858737 | Msa0961670:intron | 40.0% | |
| GAACTGCGTATCAAAAAGCA+GGG | + | chr6_3:83858719-83858738 | Msa0961670:intron | 40.0% | |
| AATCAACAGATGCACGTGTT+CGG | - | chr6_3:83859148-83859167 | None:intergenic | 40.0% | |
| AGCACGTAACAGTAACAATG+AGG | - | chr6_3:83859473-83859492 | None:intergenic | 40.0% | |
| AGCTGGTTATGTCTGATCAA+TGG | - | chr6_3:83860234-83860253 | None:intergenic | 40.0% | |
| GTTGTCCCAATGTAGACTAA+AGG | + | chr6_3:83860263-83860282 | Msa0961670:intron | 40.0% | |
| ! | GCTCATAGGTGAGATTTTGA+AGG | + | chr6_3:83860895-83860914 | Msa0961670:intron | 40.0% |
| ATATACACAAGTGGCTCCTA+AGG | - | chr6_3:83860974-83860993 | None:intergenic | 40.0% | |
| ! | ATGTTGCATGTTTGGAGTCA+GGG | + | chr6_3:83861593-83861612 | Msa0961670:intron | 40.0% |
| GGGTGAGTTTGACAAAATCA+CGG | + | chr6_3:83861613-83861632 | Msa0961670:intron | 40.0% | |
| TCACCACATTGAATGATGCA+TGG | + | chr6_3:83861892-83861911 | Msa0961670:CDS | 40.0% | |
| CACCACATTGAATGATGCAT+GGG | + | chr6_3:83861893-83861912 | Msa0961670:CDS | 40.0% | |
| !! | TGCAACGAGAGTATGCTTTT+TGG | - | chr6_3:83862019-83862038 | None:intergenic | 40.0% |
| TCTTGGAGCTGTTCTTCATT+TGG | + | chr6_3:83862151-83862170 | Msa0961670:CDS | 40.0% | |
| CTTGGAGCTGTTCTTCATTT+GGG | + | chr6_3:83862152-83862171 | Msa0961670:CDS | 40.0% | |
| !! | GGGATATAGCTTTGTGTTCA+CGG | + | chr6_3:83862172-83862191 | Msa0961670:CDS | 40.0% |
| TATGAAGCACAGACACTCAT+CGG | - | chr6_3:83862525-83862544 | None:intergenic | 40.0% | |
| GGGTTAGACCAATTGTTTAG+AGG | + | chr6_3:83862996-83863015 | Msa0961670:intron | 40.0% | |
| TGCAGGACACTGATATAATG+TGG | + | chr6_3:83863109-83863128 | Msa0961670:intron | 40.0% | |
| TGGATAGTTGTGCATGTCAT+AGG | - | chr6_3:83863208-83863227 | None:intergenic | 40.0% | |
| GACATGCACAACTATCCAAA+TGG | + | chr6_3:83863210-83863229 | Msa0961670:CDS | 40.0% | |
| ATGCACAACTATCCAAATGG+AGG | + | chr6_3:83863213-83863232 | Msa0961670:CDS | 40.0% | |
| !! | AGGGTTTTGTCAATCTAGCA+AGG | + | chr6_3:83863410-83863429 | Msa0961670:CDS | 40.0% |
| !! | TGCTAATTGTTGTGTTGGCT+TGG | + | chr6_3:83863458-83863477 | Msa0961670:CDS | 40.0% |
| GAGAAAATTCACACCCTTCT+TGG | + | chr6_3:83863553-83863572 | Msa0961670:CDS | 40.0% | |
| !! | TTTTTGGCACACTCCAAGAA+GGG | - | chr6_3:83863569-83863588 | None:intergenic | 40.0% |
| !! | CCATGACTTGTTTCCTTCTC+CGG | - | chr6_3:83855917-83855936 | None:intergenic | 45.0% |
| GGCAGAAAACCCGACAAAAT+CGG | - | chr6_3:83856525-83856544 | None:intergenic | 45.0% | |
| AAATAGGTACTAGTGGCGTG+TGG | + | chr6_3:83856870-83856889 | Msa0961670:intron | 45.0% | |
| AATAGGTACTAGTGGCGTGT+GGG | + | chr6_3:83856871-83856890 | Msa0961670:intron | 45.0% | |
| ! | AGTTGAAGCACTCAACACGT+TGG | - | chr6_3:83857714-83857733 | None:intergenic | 45.0% |
| TTTACCAAACAGAGCCGAAG+AGG | + | chr6_3:83858528-83858547 | Msa0961670:intron | 45.0% | |
| TTACCAAACAGAGCCGAAGA+GGG | + | chr6_3:83858529-83858548 | Msa0961670:intron | 45.0% | |
| CGAAACAAGGAGTCTCAAAG+AGG | + | chr6_3:83858557-83858576 | Msa0961670:intron | 45.0% | |
| GACACAGCTAAAGACAACAC+TGG | + | chr6_3:83858869-83858888 | Msa0961670:intron | 45.0% | |
| ATCAACAGATGCACGTGTTC+GGG | - | chr6_3:83859147-83859166 | None:intergenic | 45.0% | |
| TCTACATTGGGACAACCATG+TGG | - | chr6_3:83860259-83860278 | None:intergenic | 45.0% | |
| GAGGTTGCCATCCTCAATAA+TGG | + | chr6_3:83860823-83860842 | Msa0961670:intron | 45.0% | |
| CTTCACCATTGGTGTGTGTT+TGG | + | chr6_3:83861372-83861391 | Msa0961670:intron | 45.0% | |
| CTGACTCCAAACATGCAACA+TGG | - | chr6_3:83861594-83861613 | None:intergenic | 45.0% | |
| ! | CATGTTGCATGTTTGGAGTC+AGG | + | chr6_3:83861592-83861611 | Msa0961670:intron | 45.0% |
| AGCCCATGCATCATTCAATG+TGG | - | chr6_3:83861898-83861917 | None:intergenic | 45.0% | |
| !! | TTGTGTTGGCTTGGAGAACA+AGG | + | chr6_3:83863467-83863486 | Msa0961670:CDS | 45.0% |
| !! | CTTTTTGGCACACTCCAAGA+AGG | - | chr6_3:83863570-83863589 | None:intergenic | 45.0% |
| !! | ATTAGAATATTATTTATTTA+AGG | + | chr6_3:83857313-83857332 | Msa0961670:intron | 5.0% |
| !!! | ATTAAATTTGTTTTTTATTA+AGG | - | chr6_3:83857624-83857643 | None:intergenic | 5.0% |
| !!! | AAAGTTTTAATTTTTTTTTT+TGG | - | chr6_3:83857650-83857669 | None:intergenic | 5.0% |
| !!! | ATTTTATTTTTAAAAATCAT+GGG | - | chr6_3:83859270-83859289 | None:intergenic | 5.0% |
| !!! | TATTTTATTTTTAAAAATCA+TGG | - | chr6_3:83859271-83859290 | None:intergenic | 5.0% |
| !!! | TTGTTTTAATTTTTTTTTAT+AGG | + | chr6_3:83860097-83860116 | Msa0961670:intron | 5.0% |
| !! | TATATATCAAAAATATAAAA+AGG | - | chr6_3:83860748-83860767 | None:intergenic | 5.0% |
| CCGGAGAAGGAAACAAGTCA+TGG | + | chr6_3:83855914-83855933 | Msa0961670:CDS | 50.0% | |
| ATAGGTACTAGTGGCGTGTG+GGG | + | chr6_3:83856872-83856891 | Msa0961670:intron | 50.0% | |
| GCACCATTCGGAATTGTGTG+AGG | + | chr6_3:83857018-83857037 | Msa0961670:intron | 50.0% | |
| CCTCCTCACACAATTCCGAA+TGG | - | chr6_3:83857024-83857043 | None:intergenic | 50.0% | |
| CCATTCGGAATTGTGTGAGG+AGG | + | chr6_3:83857021-83857040 | Msa0961670:intron | 50.0% | |
| GGAATTGTGTGAGGAGGAAG+AGG | + | chr6_3:83857027-83857046 | Msa0961670:intron | 50.0% | |
| TTGTTTCGCAGCACCCTCTT+CGG | - | chr6_3:83858545-83858564 | None:intergenic | 50.0% | |
| CAGCTAAAGACAACACTGGC+CGG | + | chr6_3:83858873-83858892 | Msa0961670:intron | 50.0% | |
| AGCTAAAGACAACACTGGCC+GGG | + | chr6_3:83858874-83858893 | Msa0961670:intron | 50.0% | |
| GACATAACCAGCTGTCCACA+TGG | + | chr6_3:83860241-83860260 | Msa0961670:intron | 50.0% | |
| GTGGCTCCTAAGGCTATTTG+AGG | - | chr6_3:83860964-83860983 | None:intergenic | 50.0% | |
| ! | AATGATGCATGGGCTGAACC+AGG | + | chr6_3:83861903-83861922 | Msa0961670:CDS | 50.0% |
| GCACAGACACTCATCGGATT+AGG | - | chr6_3:83862519-83862538 | None:intergenic | 50.0% | |
| GGAGTGTGCCAAAAAGTTGC+AGG | + | chr6_3:83863574-83863593 | Msa0961670:CDS | 50.0% | |
| TTCTCCGGCAACGTTGTCGA+CGG | - | chr6_3:83855902-83855921 | None:intergenic | 55.0% | |
| !! | GAAGAGGGTGCTGCGAAACA+AGG | + | chr6_3:83858544-83858563 | Msa0961670:intron | 55.0% |
| GCTAAAGACAACACTGGCCG+GGG | + | chr6_3:83858875-83858894 | Msa0961670:intron | 55.0% | |
| !! | TGTTATCGGTGTCGGCGTGT+CGG | - | chr6_3:83862407-83862426 | None:intergenic | 55.0% |
| GTCGACAACGTTGCCGGAGA+AGG | + | chr6_3:83855901-83855920 | Msa0961670:CDS | 60.0% | |
| GCACCCTCTTCGGCTCTGTT+TGG | - | chr6_3:83858535-83858554 | None:intergenic | 60.0% | |
| GGGACAACCATGTGGACAGC+TGG | - | chr6_3:83860251-83860270 | None:intergenic | 60.0% | |
| ! | GGTGCCGTCGACAACGTTGC+CGG | + | chr6_3:83855895-83855914 | Msa0961670:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 83855519 | 83863599 | 83855519 | ID=Msa0961670;Name=Msa0961670 |
| chr6_3 | mRNA | 83855519 | 83863599 | 83855519 | ID=Msa0961670-mRNA-1;Parent=Msa0961670;Name=Msa0961670-mRNA-1;_AED=0.07;_eAED=0.07;_QI=352|1|0.33|1|1|1|3|0|361 |
| chr6_3 | exon | 83855519 | 83856101 | 83855519 | ID=Msa0961670-mRNA-1:exon:15019;Parent=Msa0961670-mRNA-1 |
| chr6_3 | exon | 83861825 | 83862193 | 83861825 | ID=Msa0961670-mRNA-1:exon:15020;Parent=Msa0961670-mRNA-1 |
| chr6_3 | exon | 83863114 | 83863599 | 83863114 | ID=Msa0961670-mRNA-1:exon:15021;Parent=Msa0961670-mRNA-1 |
| chr6_3 | five_prime_UTR | 83855519 | 83855870 | 83855519 | ID=Msa0961670-mRNA-1:five_prime_utr;Parent=Msa0961670-mRNA-1 |
| chr6_3 | CDS | 83855871 | 83856101 | 83855871 | ID=Msa0961670-mRNA-1:cds;Parent=Msa0961670-mRNA-1 |
| chr6_3 | CDS | 83861825 | 83862193 | 83861825 | ID=Msa0961670-mRNA-1:cds;Parent=Msa0961670-mRNA-1 |
| chr6_3 | CDS | 83863114 | 83863599 | 83863114 | ID=Msa0961670-mRNA-1:cds;Parent=Msa0961670-mRNA-1 |
| Gene Sequence |
| Protein sequence |
