AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0967710

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0967710 MtrunA17_Chr3g0127021 92.788 416 30 0 1 416 1 416 0.0 778
Msa0967710 MtrunA17_Chr1g0146861 48.731 394 150 12 42 416 42 402 4.82e-93 285
Msa0967710 MtrunA17_Chr7g0275901 33.654 416 188 13 28 414 68 424 4.34e-58 196
Msa0967710 MtrunA17_Chr8g0346681 34.167 360 178 14 88 416 41 372 7.41e-49 170
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0967710 AT2G46550.2 41.132 265 116 5 156 412 20 252 1.13e-53 179
Msa0967710 AT2G46550.3 41.132 265 116 5 156 412 92 324 1.48e-52 179
Msa0967710 AT2G46550.1 41.132 265 116 5 156 412 160 392 1.17e-51 178
Msa0967710 AT1G01240.4 40.496 242 112 8 177 414 117 330 7.76e-32 124
Msa0967710 AT1G01240.3 40.496 242 112 8 177 414 117 330 7.76e-32 124
Msa0967710 AT1G01240.1 40.496 242 112 8 177 414 117 330 7.76e-32 124
Msa0967710 AT1G01240.5 40.496 242 112 8 177 414 117 330 7.76e-32 124
Msa0967710 AT1G01240.2 40.496 242 112 8 177 414 117 330 7.76e-32 124

Find 107 sgRNAs with CRISPR-Local

Find 298 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTGGTGCTGGTTTACTTCT+TGG 0.202469 6_3:+97814047 Msa0967710:CDS
TGCTTCCGTTCCGGCTAATA+TGG 0.236774 6_3:+97810256 Msa0967710:five_prime_UTR
GTCCTTCTGATCTTTCTTCT+TGG 0.239340 6_3:-97811306 None:intergenic
TTTGACGATCTTTCTTATAT+TGG 0.255833 6_3:+97811161 Msa0967710:CDS
TCAGTCTTGCAGGAATAATT+TGG 0.259923 6_3:-97811068 None:intergenic
ATTCAATTAATGATCAAATT+CGG 0.272962 6_3:+97810952 Msa0967710:CDS
TTCTATACTGAATTTCTTGA+TGG 0.278329 6_3:+97811101 Msa0967710:CDS
CTTTGATGTTTCCGATTTCT+CGG 0.292147 6_3:+97811358 Msa0967710:CDS
TCCTTCTGATCTTTCTTCTT+GGG 0.301671 6_3:-97811305 None:intergenic
TTCAATTAATGATCAAATTC+GGG 0.324422 6_3:+97810953 Msa0967710:CDS
CAGGATTTATTTGAGAATCT+TGG 0.328624 6_3:-97813677 None:intergenic
GATATGCTCCTTCTCGTTGT+AGG 0.329509 6_3:-97813784 None:intergenic
GCAGTGGGTTTAAGCCTTGC+TGG 0.332793 6_3:+97814029 Msa0967710:CDS
TATTGGAAGTGATAATTTAT+CGG 0.333273 6_3:+97811178 Msa0967710:CDS
TCCGGCCAGAGCAAAGATTC+TGG 0.344971 6_3:+97813645 Msa0967710:CDS
GGAACCAAGCTCAGTCTTGC+AGG 0.347496 6_3:-97811078 None:intergenic
CTTATCAGAATTTCGATTAC+CGG 0.352732 6_3:-97810994 None:intergenic
ATCAAGAAATTCAGTATAGA+AGG 0.366041 6_3:-97811099 None:intergenic
GATGTCATTATTTACATTGA+AGG 0.367238 6_3:-97814092 None:intergenic
TGTAGCCACCATTTCATATC+TGG 0.379942 6_3:-97811020 None:intergenic
ACCCACCACAATCCACTTCC+TGG 0.385800 6_3:-97814454 None:intergenic
TCTAACTGAGTTCAGTTCAT+TGG 0.393593 6_3:+97810791 Msa0967710:intron
GGTTTAAGCCTTGCTGGTGC+TGG 0.404695 6_3:+97814035 Msa0967710:CDS
AGAGGAATATTTACAAATGA+TGG 0.406846 6_3:-97814237 None:intergenic
TCTCTCTTATGCTTCCGTTC+CGG 0.408909 6_3:+97810247 Msa0967710:five_prime_UTR
TCTGGAACAACGCCTACTTC+TGG 0.411020 6_3:+97811635 Msa0967710:CDS
CTTGATGGAAATGTCAAGAA+TGG 0.416125 6_3:+97811116 Msa0967710:CDS
TTGATGGAAATGTCAAGAAT+GGG 0.419864 6_3:+97811117 Msa0967710:CDS
AATGCCGCTGGTTATGCATC+TGG 0.421397 6_3:+97811617 Msa0967710:CDS
GTGCTGGTTTACTTCTTGGT+TGG 0.423182 6_3:+97814051 Msa0967710:CDS
TCAATGTAAATAATGACATC+TGG 0.424818 6_3:+97814095 Msa0967710:exon
GGGCCTTGGTGGCGCACTGC+TGG 0.425344 6_3:+97811425 Msa0967710:CDS
TCAGTAATGCTGCTGTTCTC+AGG 0.434062 6_3:-97813696 None:intergenic
GCTTCCGTTCCGGCTAATAT+GGG 0.437335 6_3:+97810257 Msa0967710:five_prime_UTR
AGCAGTGCGCCACCAAGGCC+CGG 0.441562 6_3:-97811423 None:intergenic
TTACTTCTTGGTTGGACCAT+GGG 0.448358 6_3:+97814059 Msa0967710:CDS
ACTTCTTGATCTTCAAGTAA+TGG 0.455166 6_3:-97810876 None:intergenic
TCTATGGATCAAGCAGCATC+TGG 0.456490 6_3:-97810829 None:intergenic
ATAAGCTACCAGATATGAAA+TGG 0.460867 6_3:+97811012 Msa0967710:CDS
TATTCCTGCAAGACTGAGCT+TGG 0.462198 6_3:+97811074 Msa0967710:CDS
AAACGCTTAGGCTGAGGATG+AGG 0.466545 6_3:-97811512 None:intergenic
GAAGAAAGATCAGAAGGACT+TGG 0.467901 6_3:+97811310 Msa0967710:CDS
AGATGCATAACCAGCGGCAT+TGG 0.468321 6_3:-97811615 None:intergenic
GAAATGAGAAACCCGGGCCT+TGG 0.472773 6_3:+97811411 Msa0967710:CDS
TTTACTTCTTGGTTGGACCA+TGG 0.487875 6_3:+97814058 Msa0967710:CDS
ACCAGAATCTTTGCTCTGGC+CGG 0.490478 6_3:-97813646 None:intergenic
AAGTGGATTGTGGTGGGTGC+AGG 0.490506 6_3:+97814459 Msa0967710:three_prime_UTR
CTGGATTCAGACATTGACTA+AGG 0.490930 6_3:+97814114 Msa0967710:three_prime_UTR
GCGGATTCAGTCTGCATGCC+CGG 0.491743 6_3:+97810975 Msa0967710:CDS
ATGAGAAACCCGGGCCTTGG+TGG 0.493894 6_3:+97811414 Msa0967710:CDS
CACTGCTGGTAAAGATGAGT+TGG 0.498893 6_3:+97811439 Msa0967710:CDS
TTCTTGGTTGGACCATGGGA+TGG 0.500107 6_3:+97814063 Msa0967710:CDS
TGATCATTAATTGAATTGCT+AGG 0.503875 6_3:-97810945 None:intergenic
CTCCTGCAAAAGTATGCGAC+AGG 0.504632 6_3:+97810189 None:intergenic
TCAAAAGAGTGTATATATGA+TGG 0.512014 6_3:+97814196 Msa0967710:three_prime_UTR
TGTTTCTAAGTTGAAGGCAG+AGG 0.515040 6_3:-97813881 None:intergenic
CTAACGGTTCTTAACAAAAG+AGG 0.521804 6_3:-97814255 None:intergenic
TTAAACCAGAAAACTGAGAC+TGG 0.528983 6_3:+97811587 Msa0967710:CDS
AATGATGGAAATTGAACCAA+TGG 0.530908 6_3:-97814222 None:intergenic
GTAAACCAGAATCTTTGCTC+TGG 0.535966 6_3:-97813650 None:intergenic
ACTGGTTCTTCCAATGCCGC+TGG 0.541532 6_3:+97811605 Msa0967710:CDS
GCTACATGTGAAAAGCAACT+TGG 0.542418 6_3:+97811037 Msa0967710:CDS
TCTCAAGGAAGTGAACAGTC+AGG 0.543414 6_3:-97814362 None:intergenic
AATCTCTGATCAAAACGCTT+AGG 0.546921 6_3:-97811524 None:intergenic
TTATCAGAATTTCGATTACC+GGG 0.547283 6_3:-97810993 None:intergenic
CAGTTATAGAGACCAGGAAG+TGG 0.549531 6_3:+97814442 Msa0967710:three_prime_UTR
GCAGTGCGCCACCAAGGCCC+GGG 0.550264 6_3:-97811422 None:intergenic
ACTTGAAGATCAAGAAGTAA+TGG 0.550322 6_3:+97810881 Msa0967710:exon
AAATATATACATACAACTAA+CGG 0.551075 6_3:-97814271 None:intergenic
AAGAAAGATCAGAAGGACTT+GGG 0.556919 6_3:+97811311 Msa0967710:CDS
TGAAAAGAACAGCCAGAAGT+AGG 0.557563 6_3:-97811647 None:intergenic
GAATGGTATCCCATATTAGC+CGG 0.557627 6_3:-97810266 None:intergenic
ATTATATACAAAGCCTTGCA+TGG 0.562366 6_3:-97814334 None:intergenic
TTCTCAAACAAGAGCAAGAG+AGG 0.562960 6_3:+97813740 Msa0967710:CDS
TGATCAAAACGCTTAGGCTG+AGG 0.573801 6_3:-97811518 None:intergenic
TTTGATCAGAGATTCTCAAA+GGG 0.576152 6_3:+97811533 Msa0967710:CDS
AACGCTTAGGCTGAGGATGA+GGG 0.577084 6_3:-97811511 None:intergenic
GTATATATGATGGTATCCAT+TGG 0.579504 6_3:+97814206 Msa0967710:three_prime_UTR
TCCCAAGAAGAAAGATCAGA+AGG 0.581602 6_3:+97811304 Msa0967710:CDS
TGCTAAATCTCTTTCCACAC+TGG 0.583299 6_3:+97813916 Msa0967710:CDS
TGTGTGATGTTTGCCATGCA+AGG 0.583928 6_3:+97814321 Msa0967710:three_prime_UTR
TGCCTTGCTAAATTGAGATG+TGG 0.591531 6_3:-97810288 None:intergenic
AACAGATCTCTGAGCAACAA+AGG 0.593658 6_3:-97811465 None:intergenic
AAAACGGCATCACATTTGAT+GGG 0.595069 6_3:+97811389 Msa0967710:CDS
TTCCACATCTCAATTTAGCA+AGG 0.602016 6_3:+97810286 Msa0967710:five_prime_UTR
TCTGAGTTCTGAATTAAGCA+AGG 0.603883 6_3:+97810317 Msa0967710:five_prime_UTR
AGAGACCAGGAAGTGGATTG+TGG 0.610782 6_3:+97814449 Msa0967710:three_prime_UTR
TTACCAGCAGTGCGCCACCA+AGG 0.611001 6_3:-97811428 None:intergenic
AAATTGCAGTTATAGAGACC+AGG 0.613822 6_3:+97814436 Msa0967710:three_prime_UTR
TCAAGTTGCATTCGCCAGTG+TGG 0.614289 6_3:-97813930 None:intergenic
TGATGGGAAATGAGAAACCC+GGG 0.619313 6_3:+97811405 Msa0967710:CDS
TGCTAAATTGAGATGTGGAA+TGG 0.620674 6_3:-97810283 None:intergenic
GTATCCCATATTAGCCGGAA+CGG 0.620962 6_3:-97810261 None:intergenic
TTGATGGGAAATGAGAAACC+CGG 0.621036 6_3:+97811404 Msa0967710:CDS
GCAAGAAGCCTACAACGAGA+AGG 0.635494 6_3:+97813776 Msa0967710:CDS
GAAGTAAACCAGCACCAGCA+AGG 0.638132 6_3:-97814043 None:intergenic
AGCTACCAGATATGAAATGG+TGG 0.640041 6_3:+97811015 Msa0967710:CDS
TGATGGAAATGTCAAGAATG+GGG 0.645416 6_3:+97811118 Msa0967710:CDS
TGAAGGAAACATCCATCCCA+TGG 0.646722 6_3:-97814075 None:intergenic
AACTCTTTGCATACAAACAG+TGG 0.649203 6_3:+97813835 Msa0967710:CDS
AATTAATGATCAAATTCGGG+CGG 0.649669 6_3:+97810956 Msa0967710:CDS
TGTGGAAAGAGATTTAGCAA+TGG 0.650005 6_3:-97813912 None:intergenic
GACCAGGAAGTGGATTGTGG+TGG 0.654052 6_3:+97814452 Msa0967710:three_prime_UTR
ACCAGGAAGTGGATTGTGGT+GGG 0.666144 6_3:+97814453 Msa0967710:three_prime_UTR
TGTTCCAGATGCATAACCAG+CGG 0.695980 6_3:-97811621 None:intergenic
TCCTGCAAAAGTATGCGACA+GGG 0.714077 6_3:+97810190 None:intergenic
GTAGTAGGAGAGACATGATG+TGG 0.764403 6_3:-97811209 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAAAATACAATTTACAA+TGG - chr6_3:97810478-97810497 None:intergenic 10.0%
!!! AACTGTTTTTTATATTAATT+AGG + chr6_3:97810853-97810872 Msa0967710:five_prime_UTR 10.0%
!!! ATATAAAAAACAGTTTTCTA+TGG - chr6_3:97810848-97810867 None:intergenic 15.0%
!! ATTCAATTAATGATCAAATT+CGG + chr6_3:97810952-97810971 Msa0967710:CDS 15.0%
!! AAATATATACATACAACTAA+CGG - chr6_3:97814274-97814293 None:intergenic 15.0%
!!! GATGATGATGATTAAATTAA+AGG - chr6_3:97810364-97810383 None:intergenic 20.0%
!!! TTATTAATTATTTCTGTAGC+TGG + chr6_3:97810632-97810651 Msa0967710:intron 20.0%
!!! ATACTAATTTTTTTGGAATC+TGG - chr6_3:97810914-97810933 None:intergenic 20.0%
!!! CAATCAGATACTAATTTTTT+TGG - chr6_3:97810921-97810940 None:intergenic 20.0%
!! CAAAAAAATTAGTATCTGAT+TGG + chr6_3:97810919-97810938 Msa0967710:CDS 20.0%
!! TTCAATTAATGATCAAATTC+GGG + chr6_3:97810953-97810972 Msa0967710:CDS 20.0%
!! TATTGGAAGTGATAATTTAT+CGG + chr6_3:97811178-97811197 Msa0967710:CDS 20.0%
!! TGTTTAACTGAATTTCTTTA+CGG + chr6_3:97811695-97811714 Msa0967710:intron 20.0%
!! TTTAAATTATAAAACTGCCA+AGG + chr6_3:97811787-97811806 Msa0967710:intron 20.0%
!!! TTCATAATTACTAGTTTGAA+TGG + chr6_3:97811974-97811993 Msa0967710:intron 20.0%
!!! TCATAATTACTAGTTTGAAT+GGG + chr6_3:97811975-97811994 Msa0967710:intron 20.0%
!!! TAATTTTAAATGTATAGAGC+TGG + chr6_3:97812241-97812260 Msa0967710:intron 20.0%
!!! GTGAGTTTTTCTAAATTTTA+AGG + chr6_3:97812313-97812332 Msa0967710:intron 20.0%
!! AACTAAAACTAGTGTAATAT+TGG - chr6_3:97812487-97812506 None:intergenic 20.0%
!! TATAACGATTTATATCAACT+GGG - chr6_3:97812681-97812700 None:intergenic 20.0%
!!! CTGTTCTTTTATAAAAGAAA+TGG - chr6_3:97812876-97812895 None:intergenic 20.0%
!! AAATAAAAGAAAACAGGTAA+GGG - chr6_3:97813091-97813110 None:intergenic 20.0%
!! TAAATAAAAGAAAACAGGTA+AGG - chr6_3:97813092-97813111 None:intergenic 20.0%
!! TAAATATTCAAATCGTGATT+TGG - chr6_3:97813183-97813202 None:intergenic 20.0%
!! ATCATTTCTATATGTTAAAG+AGG + chr6_3:97813370-97813389 Msa0967710:intron 20.0%
!! AATAAAGAAACAATGTTGAT+AGG - chr6_3:97813518-97813537 None:intergenic 20.0%
!!! AAATTTAAGTTAGCATAATC+AGG - chr6_3:97813593-97813612 None:intergenic 20.0%
!! AAATTTATTGTCAAACTATG+TGG + chr6_3:97813607-97813626 Msa0967710:intron 20.0%
!! AAGATCAATAACAAAAAATG+TGG + chr6_3:97813981-97814000 Msa0967710:CDS 20.0%
!! AGATCAATAACAAAAAATGT+GGG + chr6_3:97813982-97814001 Msa0967710:CDS 20.0%
!!! AAAAATGCAAAATTTTCTCA+AGG - chr6_3:97814380-97814399 None:intergenic 20.0%
!!! GAGAAAATTTTGCATTTTTT+AGG + chr6_3:97814381-97814400 Msa0967710:three_prime_UTR 20.0%
! TGATCATTAATTGAATTGCT+AGG - chr6_3:97810948-97810967 None:intergenic 25.0%
! ATCAAGAAATTCAGTATAGA+AGG - chr6_3:97811102-97811121 None:intergenic 25.0%
! TTCTATACTGAATTTCTTGA+TGG + chr6_3:97811101-97811120 Msa0967710:CDS 25.0%
! TTTGACGATCTTTCTTATAT+TGG + chr6_3:97811161-97811180 Msa0967710:CDS 25.0%
!!! TTGTTTTTCATACATGTAGT+AGG - chr6_3:97811227-97811246 None:intergenic 25.0%
!!! ATTTTCAGATGTTGGTTTTT+TGG + chr6_3:97811334-97811353 Msa0967710:CDS 25.0%
! TCAAACTAGTAATTATGAAG+AGG - chr6_3:97811973-97811992 None:intergenic 25.0%
! ATTCAAAAACACATAACAGT+TGG - chr6_3:97812080-97812099 None:intergenic 25.0%
! TAAAATTAAGTCTGTCAACA+AGG - chr6_3:97812229-97812248 None:intergenic 25.0%
! AAGGAAAAACATATCTTTCA+AGG - chr6_3:97812379-97812398 None:intergenic 25.0%
! TAAGAATATCTTATCTCATG+GGG - chr6_3:97812425-97812444 None:intergenic 25.0%
! CTAAGAATATCTTATCTCAT+GGG - chr6_3:97812426-97812445 None:intergenic 25.0%
! ACTAAGAATATCTTATCTCA+TGG - chr6_3:97812427-97812446 None:intergenic 25.0%
! AGATAAGATATTCTTAGTCA+TGG + chr6_3:97812429-97812448 Msa0967710:intron 25.0%
! GCATACAAAATGCAATTTAA+AGG - chr6_3:97812515-97812534 None:intergenic 25.0%
! GTATAACGATTTATATCAAC+TGG - chr6_3:97812682-97812701 None:intergenic 25.0%
! AGCAGTAAATAAAAGAAAAC+AGG - chr6_3:97813097-97813116 None:intergenic 25.0%
!! AGATGAGGCATTAATATAAT+GGG + chr6_3:97813310-97813329 Msa0967710:intron 25.0%
! ATTTCTATATGTTAAAGAGG+TGG + chr6_3:97813373-97813392 Msa0967710:intron 25.0%
! TTTCTATATGTTAAAGAGGT+GGG + chr6_3:97813374-97813393 Msa0967710:intron 25.0%
! TAGTCATTTCTATATGCTAA+AGG + chr6_3:97813438-97813457 Msa0967710:intron 25.0%
! GATATTAATGGTGAAAACAA+TGG - chr6_3:97813472-97813491 None:intergenic 25.0%
! AGTGAACTAGATGATATTAA+TGG - chr6_3:97813484-97813503 None:intergenic 25.0%
!! ATTAATATCATCTAGTTCAC+TGG + chr6_3:97813483-97813502 Msa0967710:intron 25.0%
!!! TGTTTTTGTTTCTAAGTTGA+AGG - chr6_3:97813890-97813909 None:intergenic 25.0%
! AATAACAAAAAATGTGGGAT+TGG + chr6_3:97813987-97814006 Msa0967710:CDS 25.0%
! GATGTCATTATTTACATTGA+AGG - chr6_3:97814095-97814114 None:intergenic 25.0%
! TCAATGTAAATAATGACATC+TGG + chr6_3:97814095-97814114 Msa0967710:exon 25.0%
!! TCAAAAGAGTGTATATATGA+TGG + chr6_3:97814196-97814215 Msa0967710:three_prime_UTR 25.0%
! AGAGGAATATTTACAAATGA+TGG - chr6_3:97814240-97814259 None:intergenic 25.0%
!!! TGTTTTTCTAAAGTCTACTC+TGG + chr6_3:97810501-97810520 Msa0967710:intron 30.0%
GCAGAAATCTCAATAAAACA+GGG - chr6_3:97810528-97810547 None:intergenic 30.0%
AACAGCCAAATTGAAGAAAA+AGG - chr6_3:97810579-97810598 None:intergenic 30.0%
!! TTCTTCAATTTGGCTGTTTT+AGG + chr6_3:97810581-97810600 Msa0967710:intron 30.0%
!! GCTGTTTTAGGTAATGAATT+TGG + chr6_3:97810593-97810612 Msa0967710:intron 30.0%
!! TAATTATTTCTGTAGCTGGA+AGG + chr6_3:97810636-97810655 Msa0967710:intron 30.0%
GTGAATGATAGTACTAATGA+TGG - chr6_3:97810712-97810731 None:intergenic 30.0%
ACTTCTTGATCTTCAAGTAA+TGG - chr6_3:97810879-97810898 None:intergenic 30.0%
ACTTGAAGATCAAGAAGTAA+TGG + chr6_3:97810881-97810900 Msa0967710:exon 30.0%
AATTAATGATCAAATTCGGG+CGG + chr6_3:97810956-97810975 Msa0967710:CDS 30.0%
TTATCAGAATTTCGATTACC+GGG - chr6_3:97810996-97811015 None:intergenic 30.0%
CTTATCAGAATTTCGATTAC+CGG - chr6_3:97810997-97811016 None:intergenic 30.0%
ATAAGCTACCAGATATGAAA+TGG + chr6_3:97811012-97811031 Msa0967710:CDS 30.0%
TTGATGGAAATGTCAAGAAT+GGG + chr6_3:97811117-97811136 Msa0967710:CDS 30.0%
! TTTTGATCAGAGATTCTCAA+AGG + chr6_3:97811532-97811551 Msa0967710:CDS 30.0%
TTTGATCAGAGATTCTCAAA+GGG + chr6_3:97811533-97811552 Msa0967710:CDS 30.0%
!!! GTTTTCTGGTTTAAAGATGA+TGG - chr6_3:97811581-97811600 None:intergenic 30.0%
AGGATTCAAAAAGTCATTTC+AGG + chr6_3:97811669-97811688 Msa0967710:CDS 30.0%
TCCTAATTAAATGACCATGA+AGG - chr6_3:97811746-97811765 None:intergenic 30.0%
TTATTCCATTGTTCATGAGA+CGG + chr6_3:97811841-97811860 Msa0967710:intron 30.0%
!!! GGTGCTTATTTTTTAAAGCT+TGG + chr6_3:97811862-97811881 Msa0967710:intron 30.0%
! TTGAAGATAGCTAGCTTATT+TGG - chr6_3:97811932-97811951 None:intergenic 30.0%
AGCTATCTTCAAGTAATATG+AGG + chr6_3:97811940-97811959 Msa0967710:intron 30.0%
AACTAGTAATTATGAAGAGG+CGG - chr6_3:97811970-97811989 None:intergenic 30.0%
!!! CTTTTTTATACCTCAGTACT+GGG + chr6_3:97812017-97812036 Msa0967710:intron 30.0%
!!! TTTTTTATACCTCAGTACTG+GGG + chr6_3:97812018-97812037 Msa0967710:intron 30.0%
!! TGTTTTTGAATTCCCATGAT+AGG + chr6_3:97812089-97812108 Msa0967710:intron 30.0%
! ATCCAACAAAATTAACTTGG+TGG - chr6_3:97812204-97812223 None:intergenic 30.0%
GAGATCCAACAAAATTAACT+TGG - chr6_3:97812207-97812226 None:intergenic 30.0%
AAGAATATCTTATCTCATGG+GGG - chr6_3:97812424-97812443 None:intergenic 30.0%
TTATGTTTCAGACGCTTATA+TGG + chr6_3:97812572-97812591 Msa0967710:intron 30.0%
ATCGTTATACGTATCTATTC+TGG + chr6_3:97812692-97812711 Msa0967710:intron 30.0%
AAAATGAATTGAGATTCCTG+CGG - chr6_3:97812728-97812747 None:intergenic 30.0%
TATGAATAGTGTGATTCAGA+GGG - chr6_3:97812775-97812794 None:intergenic 30.0%
ATATGAATAGTGTGATTCAG+AGG - chr6_3:97812776-97812795 None:intergenic 30.0%
CTTCAATGATGATTCTATCT+TGG - chr6_3:97812920-97812939 None:intergenic 30.0%
!! CTGAATTTTGACAAACTGAA+CGG - chr6_3:97813227-97813246 None:intergenic 30.0%
! AAACATTGATGACATTTGAC+AGG + chr6_3:97813257-97813276 Msa0967710:intron 30.0%
! GAGATGAGGCATTAATATAA+TGG + chr6_3:97813309-97813328 Msa0967710:intron 30.0%
! AGGCATTAATATAATGGGAT+AGG + chr6_3:97813315-97813334 Msa0967710:intron 30.0%
CAGGATTTATTTGAGAATCT+TGG - chr6_3:97813680-97813699 None:intergenic 30.0%
! CATGAGTCTTTTCTTTAAAC+AGG + chr6_3:97813806-97813825 Msa0967710:CDS 30.0%
GTATATATGATGGTATCCAT+TGG + chr6_3:97814206-97814225 Msa0967710:three_prime_UTR 30.0%
! AATGATGGAAATTGAACCAA+TGG - chr6_3:97814225-97814244 None:intergenic 30.0%
ATTATATACAAAGCCTTGCA+TGG - chr6_3:97814337-97814356 None:intergenic 30.0%
TGCTAAATTGAGATGTGGAA+TGG - chr6_3:97810286-97810305 None:intergenic 35.0%
TTCCACATCTCAATTTAGCA+AGG + chr6_3:97810286-97810305 Msa0967710:five_prime_UTR 35.0%
!! TCTGAGTTCTGAATTAAGCA+AGG + chr6_3:97810317-97810336 Msa0967710:five_prime_UTR 35.0%
TTAAATTAAAGGCGACACAC+AGG - chr6_3:97810353-97810372 None:intergenic 35.0%
AATGGTTCTTCATGCATGTT+TGG - chr6_3:97810460-97810479 None:intergenic 35.0%
GGCAGAAATCTCAATAAAAC+AGG - chr6_3:97810529-97810548 None:intergenic 35.0%
! GCACTCCTTTTTCTTCAATT+TGG + chr6_3:97810571-97810590 Msa0967710:intron 35.0%
!!! GAATTTGGCAGTTTTAAGTC+AGG + chr6_3:97810608-97810627 Msa0967710:intron 35.0%
TCTAACTGAGTTCAGTTCAT+TGG + chr6_3:97810791-97810810 Msa0967710:intron 35.0%
TCAGTCTTGCAGGAATAATT+TGG - chr6_3:97811071-97811090 None:intergenic 35.0%
CTTGATGGAAATGTCAAGAA+TGG + chr6_3:97811116-97811135 Msa0967710:CDS 35.0%
TGATGGAAATGTCAAGAATG+GGG + chr6_3:97811118-97811137 Msa0967710:CDS 35.0%
TCCTTCTGATCTTTCTTCTT+GGG - chr6_3:97811308-97811327 None:intergenic 35.0%
AAGAAAGATCAGAAGGACTT+GGG + chr6_3:97811311-97811330 Msa0967710:CDS 35.0%
CTTTGATGTTTCCGATTTCT+CGG + chr6_3:97811358-97811377 Msa0967710:CDS 35.0%
!!! TTTTTCTGAGACCGAGAAAT+CGG - chr6_3:97811372-97811391 None:intergenic 35.0%
TTTCTCGGTCTCAGAAAAAA+CGG + chr6_3:97811373-97811392 Msa0967710:CDS 35.0%
AAAAACGGCATCACATTTGA+TGG + chr6_3:97811388-97811407 Msa0967710:CDS 35.0%
AAAACGGCATCACATTTGAT+GGG + chr6_3:97811389-97811408 Msa0967710:CDS 35.0%
AATCTCTGATCAAAACGCTT+AGG - chr6_3:97811527-97811546 None:intergenic 35.0%
TTAAACCAGAAAACTGAGAC+TGG + chr6_3:97811587-97811606 Msa0967710:CDS 35.0%
! CCATGAAGGCATATATTACA+GGG - chr6_3:97811732-97811751 None:intergenic 35.0%
! ACCATGAAGGCATATATTAC+AGG - chr6_3:97811733-97811752 None:intergenic 35.0%
GCCTTCATGGTCATTTAATT+AGG + chr6_3:97811742-97811761 Msa0967710:intron 35.0%
GAAGTTGAAGTATGGAACAT+TGG - chr6_3:97811905-97811924 None:intergenic 35.0%
!! TTGGCTTTGAAGTTGAAGTA+TGG - chr6_3:97811913-97811932 None:intergenic 35.0%
ACTAGTAATTATGAAGAGGC+GGG - chr6_3:97811969-97811988 None:intergenic 35.0%
! CCAGTACTGAGGTATAAAAA+AGG - chr6_3:97812019-97812038 None:intergenic 35.0%
!!! CCTTTTTTATACCTCAGTAC+TGG + chr6_3:97812016-97812035 Msa0967710:intron 35.0%
ATAACAGTTGGCTAAGTGAT+GGG - chr6_3:97812068-97812087 None:intergenic 35.0%
AAATTCAGACCACCATTAAG+TGG + chr6_3:97812125-97812144 Msa0967710:intron 35.0%
AATTCAGACCACCATTAAGT+GGG + chr6_3:97812126-97812145 Msa0967710:intron 35.0%
ACCCAGGATAAGGATATTTA+TGG + chr6_3:97812176-97812195 Msa0967710:intron 35.0%
CCCATAAATATCCTTATCCT+GGG - chr6_3:97812180-97812199 None:intergenic 35.0%
CCCAGGATAAGGATATTTAT+GGG + chr6_3:97812177-97812196 Msa0967710:intron 35.0%
CCAGGATAAGGATATTTATG+GGG + chr6_3:97812178-97812197 Msa0967710:intron 35.0%
GCATATAATGAGAAGAGAGT+GGG - chr6_3:97812349-97812368 None:intergenic 35.0%
AGCATATAATGAGAAGAGAG+TGG - chr6_3:97812350-97812369 None:intergenic 35.0%
AGAATATCTTATCTCATGGG+GGG - chr6_3:97812423-97812442 None:intergenic 35.0%
AGTGTAATATTGGAGAACAG+TGG - chr6_3:97812477-97812496 None:intergenic 35.0%
TTCATATTCTGCTGTATGTG+CGG + chr6_3:97812789-97812808 Msa0967710:intron 35.0%
! TAACATGCCTTTAAGAAACC+AGG - chr6_3:97812840-97812859 None:intergenic 35.0%
GGAAAAAAACACTGTAGGAA+GGG - chr6_3:97812968-97812987 None:intergenic 35.0%
TGCAAAACACTGTTTAGACA+GGG - chr6_3:97812993-97813012 None:intergenic 35.0%
AACAAGATAAGGCGACTAAA+GGG - chr6_3:97813045-97813064 None:intergenic 35.0%
AAACAAGATAAGGCGACTAA+AGG - chr6_3:97813046-97813065 None:intergenic 35.0%
CACCATCTTCAAACAAGATA+AGG - chr6_3:97813056-97813075 None:intergenic 35.0%
!! CGCTTATTTTCTTCGATCTA+CGG + chr6_3:97813140-97813159 Msa0967710:intron 35.0%
! ATTTTCTTCGATCTACGGTT+TGG + chr6_3:97813145-97813164 Msa0967710:intron 35.0%
AATAGAGGGAAACAGTTAGA+AGG + chr6_3:97813287-97813306 Msa0967710:intron 35.0%
AACTCTTTGCATACAAACAG+TGG + chr6_3:97813835-97813854 Msa0967710:CDS 35.0%
TGTGGAAAGAGATTTAGCAA+TGG - chr6_3:97813915-97813934 None:intergenic 35.0%
CTAACGGTTCTTAACAAAAG+AGG - chr6_3:97814258-97814277 None:intergenic 35.0%
AAATTGCAGTTATAGAGACC+AGG + chr6_3:97814436-97814455 Msa0967710:three_prime_UTR 35.0%
GAATGGTATCCCATATTAGC+CGG - chr6_3:97810269-97810288 None:intergenic 40.0%
TGCCTTGCTAAATTGAGATG+TGG - chr6_3:97810291-97810310 None:intergenic 40.0%
GTGTACATAAGAGCAGTGTT+TGG - chr6_3:97810550-97810569 None:intergenic 40.0%
AGCTACCAGATATGAAATGG+TGG + chr6_3:97811015-97811034 Msa0967710:CDS 40.0%
TGTAGCCACCATTTCATATC+TGG - chr6_3:97811023-97811042 None:intergenic 40.0%
GCTACATGTGAAAAGCAACT+TGG + chr6_3:97811037-97811056 Msa0967710:CDS 40.0%
TGCCAGAATGCGAAAAATTG+AGG + chr6_3:97811253-97811272 Msa0967710:CDS 40.0%
! AGCCTCAATTTTTCGCATTC+TGG - chr6_3:97811258-97811277 None:intergenic 40.0%
TCCCAAGAAGAAAGATCAGA+AGG + chr6_3:97811304-97811323 Msa0967710:CDS 40.0%
GTCCTTCTGATCTTTCTTCT+TGG - chr6_3:97811309-97811328 None:intergenic 40.0%
GAAGAAAGATCAGAAGGACT+TGG + chr6_3:97811310-97811329 Msa0967710:CDS 40.0%
! GACTTGGGATTTTCAGATGT+TGG + chr6_3:97811326-97811345 Msa0967710:CDS 40.0%
TTGATGGGAAATGAGAAACC+CGG + chr6_3:97811404-97811423 Msa0967710:CDS 40.0%
AACAGATCTCTGAGCAACAA+AGG - chr6_3:97811468-97811487 None:intergenic 40.0%
! AAGAACCAGTCTCAGTTTTC+TGG - chr6_3:97811595-97811614 None:intergenic 40.0%
TGAAAAGAACAGCCAGAAGT+AGG - chr6_3:97811650-97811669 None:intergenic 40.0%
!! TACTTCTGGCTGTTCTTTTC+AGG + chr6_3:97811649-97811668 Msa0967710:CDS 40.0%
CCCTGTAATATATGCCTTCA+TGG + chr6_3:97811729-97811748 Msa0967710:intron 40.0%
TGTGAAACTTGTCTACGTCT+CGG + chr6_3:97811814-97811833 Msa0967710:intron 40.0%
CATAACAGTTGGCTAAGTGA+TGG - chr6_3:97812069-97812088 None:intergenic 40.0%
CGACAACTTTCTCCTATCAT+GGG - chr6_3:97812104-97812123 None:intergenic 40.0%
ACGACAACTTTCTCCTATCA+TGG - chr6_3:97812105-97812124 None:intergenic 40.0%
CCCCATAAATATCCTTATCC+TGG - chr6_3:97812181-97812200 None:intergenic 40.0%
! GGCCACCAAGTTAATTTTGT+TGG + chr6_3:97812199-97812218 Msa0967710:intron 40.0%
ATAGAGCTGGTAACATATGC+AGG + chr6_3:97812254-97812273 Msa0967710:intron 40.0%
TAGAGCTGGTAACATATGCA+GGG + chr6_3:97812255-97812274 Msa0967710:intron 40.0%
AATGGAATGGCAAAGTCAGA+AGG - chr6_3:97812398-97812417 None:intergenic 40.0%
GTATGCCACCAAGATAAACA+AGG + chr6_3:97812529-97812548 Msa0967710:intron 40.0%
! TCAACGCACCTTGTTTATCT+TGG - chr6_3:97812540-97812559 None:intergenic 40.0%
GGGAAAAAAACACTGTAGGA+AGG - chr6_3:97812969-97812988 None:intergenic 40.0%
AAACACTGTTTAGACAGGGT+GGG - chr6_3:97812989-97813008 None:intergenic 40.0%
AAAACACTGTTTAGACAGGG+TGG - chr6_3:97812990-97813009 None:intergenic 40.0%
GTGCAAAACACTGTTTAGAC+AGG - chr6_3:97812994-97813013 None:intergenic 40.0%
AAGGGGGAAAAAAATGGAGA+AGG - chr6_3:97813027-97813046 None:intergenic 40.0%
CGACTAAAGGGGGAAAAAAA+TGG - chr6_3:97813033-97813052 None:intergenic 40.0%
ACAAGATAAGGCGACTAAAG+GGG - chr6_3:97813044-97813063 None:intergenic 40.0%
! CGCCTTATCTTGTTTGAAGA+TGG + chr6_3:97813051-97813070 Msa0967710:intron 40.0%
TGAAGATGGTGCTCTTTCTT+TGG + chr6_3:97813065-97813084 Msa0967710:intron 40.0%
! CGATCTACGGTTTGGAAATT+AGG + chr6_3:97813153-97813172 Msa0967710:intron 40.0%
ACTGTTTCCCTCTATTACAC+AGG - chr6_3:97813283-97813302 None:intergenic 40.0%
GAAACAGTTAGAAGGAGATG+AGG + chr6_3:97813295-97813314 Msa0967710:intron 40.0%
GATAGGTCACATTTGTCTAG+TGG + chr6_3:97813332-97813351 Msa0967710:intron 40.0%
GTAAACCAGAATCTTTGCTC+TGG - chr6_3:97813653-97813672 None:intergenic 40.0%
TTCTCAAACAAGAGCAAGAG+AGG + chr6_3:97813740-97813759 Msa0967710:CDS 40.0%
! TGTTTCTAAGTTGAAGGCAG+AGG - chr6_3:97813884-97813903 None:intergenic 40.0%
TGCTAAATCTCTTTCCACAC+TGG + chr6_3:97813916-97813935 Msa0967710:CDS 40.0%
TTTACTTCTTGGTTGGACCA+TGG + chr6_3:97814058-97814077 Msa0967710:CDS 40.0%
TTACTTCTTGGTTGGACCAT+GGG + chr6_3:97814059-97814078 Msa0967710:CDS 40.0%
! CTGGATTCAGACATTGACTA+AGG + chr6_3:97814114-97814133 Msa0967710:three_prime_UTR 40.0%
TCTCTCTTATGCTTCCGTTC+CGG + chr6_3:97810247-97810266 Msa0967710:five_prime_UTR 45.0%
GTATCCCATATTAGCCGGAA+CGG - chr6_3:97810264-97810283 None:intergenic 45.0%
TCTATGGATCAAGCAGCATC+TGG - chr6_3:97810832-97810851 None:intergenic 45.0%
TATTCCTGCAAGACTGAGCT+TGG + chr6_3:97811074-97811093 Msa0967710:CDS 45.0%
GTAGTAGGAGAGACATGATG+TGG - chr6_3:97811212-97811231 None:intergenic 45.0%
TGATGGGAAATGAGAAACCC+GGG + chr6_3:97811405-97811424 Msa0967710:CDS 45.0%
CACTGCTGGTAAAGATGAGT+TGG + chr6_3:97811439-97811458 Msa0967710:CDS 45.0%
TGATCAAAACGCTTAGGCTG+AGG - chr6_3:97811521-97811540 None:intergenic 45.0%
TGTTCCAGATGCATAACCAG+CGG - chr6_3:97811624-97811643 None:intergenic 45.0%
GACAAGTTTCACAGTTGCCT+TGG - chr6_3:97811807-97811826 None:intergenic 45.0%
GTGAAACTTGTCTACGTCTC+GGG + chr6_3:97811815-97811834 Msa0967710:intron 45.0%
! AAGCACCGTCTCATGAACAA+TGG - chr6_3:97811849-97811868 None:intergenic 45.0%
! TTTATACCTCAGTACTGGGG+TGG + chr6_3:97812021-97812040 Msa0967710:intron 45.0%
! TCTAGGATCCCACTTAATGG+TGG - chr6_3:97812137-97812156 None:intergenic 45.0%
TCCTAGACCCAATTCACTCA+TGG + chr6_3:97812150-97812169 Msa0967710:intron 45.0%
!! GGGTTAGCCATGAGTGAATT+GGG - chr6_3:97812160-97812179 None:intergenic 45.0%
!! TGGGTTAGCCATGAGTGAAT+TGG - chr6_3:97812161-97812180 None:intergenic 45.0%
AATTCACTCATGGCTAACCC+AGG + chr6_3:97812160-97812179 Msa0967710:intron 45.0%
CTTATCTCATGGGGGGATAA+TGG - chr6_3:97812416-97812435 None:intergenic 45.0%
! ACGCACCTTGTTTATCTTGG+TGG - chr6_3:97812537-97812556 None:intergenic 45.0%
!! TAAACAAGGTGCGTTGACTG+TGG + chr6_3:97812543-97812562 Msa0967710:intron 45.0%
!! AAACAAGGTGCGTTGACTGT+GGG + chr6_3:97812544-97812563 Msa0967710:intron 45.0%
TTCTGGACATGAATTACCGC+AGG + chr6_3:97812709-97812728 Msa0967710:intron 45.0%
! TGCCTTTAAGAAACCAGGTG+CGG - chr6_3:97812835-97812854 None:intergenic 45.0%
GGGTGGGAAAAAAACACTGT+AGG - chr6_3:97812973-97812992 None:intergenic 45.0%
GGGGAAAAAAATGGAGAAGG+AGG - chr6_3:97813024-97813043 None:intergenic 45.0%
CAAGATAAGGCGACTAAAGG+GGG - chr6_3:97813043-97813062 None:intergenic 45.0%
AACTGAACGGCTGCAAATCA+TGG - chr6_3:97813214-97813233 None:intergenic 45.0%
TTGACAGGCCTGTGTAATAG+AGG + chr6_3:97813272-97813291 Msa0967710:intron 45.0%
TGACAGGCCTGTGTAATAGA+GGG + chr6_3:97813273-97813292 Msa0967710:intron 45.0%
GTTAAAGAGGTGGGAGTCAT+AGG + chr6_3:97813383-97813402 Msa0967710:intron 45.0%
TCAGTAATGCTGCTGTTCTC+AGG - chr6_3:97813699-97813718 None:intergenic 45.0%
GATATGCTCCTTCTCGTTGT+AGG - chr6_3:97813787-97813806 None:intergenic 45.0%
!!! ATGTGTCGTTGCTTTTGCAG+TGG + chr6_3:97814013-97814032 Msa0967710:CDS 45.0%
!!! TGTGTCGTTGCTTTTGCAGT+GGG + chr6_3:97814014-97814033 Msa0967710:CDS 45.0%
!! GTGCTGGTTTACTTCTTGGT+TGG + chr6_3:97814051-97814070 Msa0967710:CDS 45.0%
TGAAGGAAACATCCATCCCA+TGG - chr6_3:97814078-97814097 None:intergenic 45.0%
TGTGTGATGTTTGCCATGCA+AGG + chr6_3:97814321-97814340 Msa0967710:three_prime_UTR 45.0%
TCTCAAGGAAGTGAACAGTC+AGG - chr6_3:97814365-97814384 None:intergenic 45.0%
CAGTTATAGAGACCAGGAAG+TGG + chr6_3:97814442-97814461 Msa0967710:three_prime_UTR 45.0%
TGCTTCCGTTCCGGCTAATA+TGG + chr6_3:97810256-97810275 Msa0967710:five_prime_UTR 50.0%
GCTTCCGTTCCGGCTAATAT+GGG + chr6_3:97810257-97810276 Msa0967710:five_prime_UTR 50.0%
AACGCTTAGGCTGAGGATGA+GGG - chr6_3:97811514-97811533 None:intergenic 50.0%
AAACGCTTAGGCTGAGGATG+AGG - chr6_3:97811515-97811534 None:intergenic 50.0%
AGATGCATAACCAGCGGCAT+TGG - chr6_3:97811618-97811637 None:intergenic 50.0%
! AATGCCGCTGGTTATGCATC+TGG + chr6_3:97811617-97811636 Msa0967710:CDS 50.0%
! TCTGGAACAACGCCTACTTC+TGG + chr6_3:97811635-97811654 Msa0967710:CDS 50.0%
TCATTACCACCCCAGTACTG+AGG - chr6_3:97812030-97812049 None:intergenic 50.0%
! CAGTTGGCTAAGTGATGGGA+AGG - chr6_3:97812064-97812083 None:intergenic 50.0%
! GGGTCTAGGATCCCACTTAA+TGG - chr6_3:97812140-97812159 None:intergenic 50.0%
GCCATGAGTGAATTGGGTCT+AGG - chr6_3:97812154-97812173 None:intergenic 50.0%
CTCATGGCTAACCCAGGATA+AGG + chr6_3:97812166-97812185 Msa0967710:intron 50.0%
!! CTCATGGGGGGATAATGGAA+TGG - chr6_3:97812411-97812430 None:intergenic 50.0%
CTGTATGTGCGGCCTTGAAA+CGG + chr6_3:97812800-97812819 Msa0967710:intron 50.0%
TGTATGTGCGGCCTTGAAAC+GGG + chr6_3:97812801-97812820 Msa0967710:intron 50.0%
! CCTTTAAGAAACCAGGTGCG+GGG - chr6_3:97812833-97812852 None:intergenic 50.0%
! GCCTTTAAGAAACCAGGTGC+GGG - chr6_3:97812834-97812853 None:intergenic 50.0%
GTGGGAGTCATAGGTCACAT+TGG + chr6_3:97813392-97813411 Msa0967710:intron 50.0%
CATAGGTCACATTGGTCGAG+TGG + chr6_3:97813400-97813419 Msa0967710:intron 50.0%
TGGTTCTTCACGTCCAGTTC+CGG + chr6_3:97813627-97813646 Msa0967710:intron 50.0%
ACCAGAATCTTTGCTCTGGC+CGG - chr6_3:97813649-97813668 None:intergenic 50.0%
GCAAGAAGCCTACAACGAGA+AGG + chr6_3:97813776-97813795 Msa0967710:CDS 50.0%
! TCAAGTTGCATTCGCCAGTG+TGG - chr6_3:97813933-97813952 None:intergenic 50.0%
GAAGTAAACCAGCACCAGCA+AGG - chr6_3:97814046-97814065 None:intergenic 50.0%
!! GCTGGTGCTGGTTTACTTCT+TGG + chr6_3:97814047-97814066 Msa0967710:CDS 50.0%
TTCTTGGTTGGACCATGGGA+TGG + chr6_3:97814063-97814082 Msa0967710:CDS 50.0%
!! AGAGACCAGGAAGTGGATTG+TGG + chr6_3:97814449-97814468 Msa0967710:three_prime_UTR 50.0%
!! ACCAGGAAGTGGATTGTGGT+GGG + chr6_3:97814453-97814472 Msa0967710:three_prime_UTR 50.0%
GGAACCAAGCTCAGTCTTGC+AGG - chr6_3:97811081-97811100 None:intergenic 55.0%
GAAATGAGAAACCCGGGCCT+TGG + chr6_3:97811411-97811430 Msa0967710:CDS 55.0%
! ACTGGTTCTTCCAATGCCGC+TGG + chr6_3:97811605-97811624 Msa0967710:CDS 55.0%
CCCCGCACCTGGTTTCTTAA+AGG + chr6_3:97812830-97812849 Msa0967710:intron 55.0%
ATCTTTGCTCTGGCCGGAAC+TGG - chr6_3:97813643-97813662 None:intergenic 55.0%
TCCGGCCAGAGCAAAGATTC+TGG + chr6_3:97813645-97813664 Msa0967710:CDS 55.0%
! GCAGTGGGTTTAAGCCTTGC+TGG + chr6_3:97814029-97814048 Msa0967710:CDS 55.0%
GGTTTAAGCCTTGCTGGTGC+TGG + chr6_3:97814035-97814054 Msa0967710:CDS 55.0%
!! GACCAGGAAGTGGATTGTGG+TGG + chr6_3:97814452-97814471 Msa0967710:three_prime_UTR 55.0%
ACCCACCACAATCCACTTCC+TGG - chr6_3:97814457-97814476 None:intergenic 55.0%
!! AAGTGGATTGTGGTGGGTGC+AGG + chr6_3:97814459-97814478 Msa0967710:three_prime_UTR 55.0%
GCGGATTCAGTCTGCATGCC+CGG + chr6_3:97810975-97810994 Msa0967710:CDS 60.0%
ATGAGAAACCCGGGCCTTGG+TGG + chr6_3:97811414-97811433 Msa0967710:CDS 60.0%
TTACCAGCAGTGCGCCACCA+AGG - chr6_3:97811431-97811450 None:intergenic 60.0%
AGAAACCAGGTGCGGGGACA+TGG - chr6_3:97812827-97812846 None:intergenic 60.0%
CGGGGACATGGCCCGTTTCA+AGG - chr6_3:97812815-97812834 None:intergenic 65.0%
AGCAGTGCGCCACCAAGGCC+CGG - chr6_3:97811426-97811445 None:intergenic 70.0%
GCAGTGCGCCACCAAGGCCC+GGG - chr6_3:97811425-97811444 None:intergenic 75.0%
!! GGGCCTTGGTGGCGCACTGC+TGG + chr6_3:97811425-97811444 Msa0967710:CDS 75.0%
ACGGGCCATGTCCCCGCACC+TGG + chr6_3:97812819-97812838 Msa0967710:intron 75.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 97810196 97814492 97810196 ID=Msa0967710;Name=Msa0967710
chr6_3 mRNA 97810196 97814492 97810196 ID=Msa0967710-mRNA-1;Parent=Msa0967710;Name=Msa0967710-mRNA-1;_AED=0.10;_eAED=0.10;_QI=237|1|1|1|0.5|0.33|3|389|416
chr6_3 exon 97810196 97810338 97810196 ID=Msa0967710-mRNA-1:exon:18214;Parent=Msa0967710-mRNA-1
chr6_3 exon 97810806 97811690 97810806 ID=Msa0967710-mRNA-1:exon:18215;Parent=Msa0967710-mRNA-1
chr6_3 exon 97813644 97814492 97813644 ID=Msa0967710-mRNA-1:exon:18216;Parent=Msa0967710-mRNA-1
chr6_3 five_prime_UTR 97810196 97810338 97810196 ID=Msa0967710-mRNA-1:five_prime_utr;Parent=Msa0967710-mRNA-1
chr6_3 five_prime_UTR 97810806 97810899 97810806 ID=Msa0967710-mRNA-1:five_prime_utr;Parent=Msa0967710-mRNA-1
chr6_3 CDS 97810900 97811690 97810900 ID=Msa0967710-mRNA-1:cds;Parent=Msa0967710-mRNA-1
chr6_3 CDS 97813644 97814103 97813644 ID=Msa0967710-mRNA-1:cds;Parent=Msa0967710-mRNA-1
chr6_3 three_prime_UTR 97814104 97814492 97814104 ID=Msa0967710-mRNA-1:three_prime_utr;Parent=Msa0967710-mRNA-1
Gene Sequence

>Msa0967710

ATGGCAAATTTCCAGATTCCAAAAAAATTAGTATCTGATTGGAAACCTAGCAATTCAATTAATGATCAAATTCGGGCGGATTCAGTCTGCATGCCCGGTAATCGAAATTCTGATAAGCTACCAGATATGAAATGGTGGCTACATGTGAAAAGCAACTTGGATTGTGAACCAAATTATTCCTGCAAGACTGAGCTTGGTTCCTTCTATACTGAATTTCTTGATGGAAATGTCAAGAATGGGGAAGATCAATCTATCATTGACTTTGACGATCTTTCTTATATTGGAAGTGATAATTTATCGGTTGATCAGCCACATCATGTCTCTCCTACTACATGTATGAAAAACAACAATAATGCCAGAATGCGAAAAATTGAGGCTTCATTGAACAATGATTTTCATTTTACTCCCAAGAAGAAAGATCAGAAGGACTTGGGATTTTCAGATGTTGGTTTTTTGGACTTTGATGTTTCCGATTTCTCGGTCTCAGAAAAAACGGCATCACATTTGATGGGAAATGAGAAACCCGGGCCTTGGTGGCGCACTGCTGGTAAAGATGAGTTGGCTTCCTTTGTTGCTCAGAGATCTGTTGAGCATGTTGAAAATTGTGATCTCCCTCATCCTCAGCCTAAGCGTTTTGATCAGAGATTCTCAAAGGGTGTAGATAATGATAAGATTCTACCATCATCTTTAAACCAGAAAACTGAGACTGGTTCTTCCAATGCCGCTGGTTATGCATCTGGAACAACGCCTACTTCTGGCTGTTCTTTTCAGGATTCAAAAAGTCATTTCAGTTCCGGCCAGAGCAAAGATTCTGGTTTACGCAACCAAGATTCTCAAATAAATCCTGAGAACAGCAGCATTACTGAGCTGTTAGAAGCACTGTGTCATTCTCAAACAAGAGCAAGAGAGGCTGAGAAAGCAGCGCAAGAAGCCTACAACGAGAAGGAGCATATCATGAGTCTTTTCTTTAAACAGGTTTCTCAACTCTTTGCATACAAACAGTGGTACTACATGCTGCAGCTCGAGAACCTCTGCCTTCAACTTAGAAACAAAAACAAACCATTGCTAAATCTCTTTCCACACTGGCGAATGCAACTTGAGAAAAATCGCAACAGAGCTGAAAAGAGAAAGATCAATAACAAAAAATGTGGGATTGGAAAATGTGTCGTTGCTTTTGCAGTGGGTTTAAGCCTTGCTGGTGCTGGTTTACTTCTTGGTTGGACCATGGGATGGATGTTTCCTTCAATGTAA
Protein sequence

>Msa0967710

MANFQIPKKLVSDWKPSNSINDQIRADSVCMPGNRNSDKLPDMKWWLHVKSNLDCEPNYSCKTELGSFYTEFLDGNVKNGEDQSIIDFDDLSYIGSDNLSVDQPHHVSPTTCMKNNNNARMRKIEASLNNDFHFTPKKKDQKDLGFSDVGFLDFDVSDFSVSEKTASHLMGNEKPGPWWRTAGKDELASFVAQRSVEHVENCDLPHPQPKRFDQRFSKGVDNDKILPSSLNQKTETGSSNAAGYASGTTPTSGCSFQDSKSHFSSGQSKDSGLRNQDSQINPENSSITELLEALCHSQTRAREAEKAAQEAYNEKEHIMSLFFKQVSQLFAYKQWYYMLQLENLCLQLRNKNKPLLNLFPHWRMQLEKNRNRAEKRKINNKKCGIGKCVVAFAVGLSLAGAGLLLGWTMGWMFPSM*