Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0970590 | XP_013450760.1 | 97.468 | 237 | 4 | 1 | 1 | 235 | 1 | 237 | 2.31e-167 | 471 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0970590 | sp|Q8VZT8|RT11_ARATH | 58.642 | 162 | 65 | 1 | 76 | 235 | 153 | 314 | 1.70e-64 | 206 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0970590 | I3SP73 | 97.468 | 237 | 4 | 1 | 1 | 235 | 1 | 237 | 1.10e-167 | 471 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0547240 | Msa0970590 | 0.824435 | 8.083412e-54 | -8.615850e-47 |
| Msa0970590 | Msa1458800 | 0.977538 | 5.573261e-144 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0970590 | MtrunA17_Chr6g0449471 | 97.468 | 237 | 4 | 1 | 1 | 235 | 1 | 237 | 2.12e-171 | 471 |
| Msa0970590 | MtrunA17_Chr2g0332561 | 86.555 | 238 | 29 | 2 | 1 | 235 | 1 | 238 | 1.40e-147 | 410 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0970590 | AT1G31817.1 | 58.642 | 162 | 65 | 1 | 76 | 235 | 153 | 314 | 1.73e-65 | 206 |
Find 70 sgRNAs with CRISPR-Local
Find 306 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCAGCATTATTCTCACTTT+TGG | 0.164647 | 6_4:-2144061 | None:intergenic |
| ATTACTAGGGTTTGAGATTT+GGG | 0.234267 | 6_4:-2138820 | None:intergenic |
| TCATAATGAAATATGTAAAA+TGG | 0.237571 | 6_4:-2144807 | None:intergenic |
| CATTGTTGCTGCAGATTACT+AGG | 0.255446 | 6_4:-2138834 | None:intergenic |
| TTGGCAGTCTGCAGCCATTA+TGG | 0.258176 | 6_4:-2144518 | None:intergenic |
| GATTACTAGGGTTTGAGATT+TGG | 0.262449 | 6_4:-2138821 | None:intergenic |
| AATCAGGGCAAAAGCTTTCT+AGG | 0.277751 | 6_4:+2144298 | Msa0970590:CDS |
| GTGAGATTGAAGTGTGGTTT+TGG | 0.288990 | 6_4:-2138912 | None:intergenic |
| CCCTGATTTCATGTCTTTCA+AGG | 0.289130 | 6_4:-2144283 | None:intergenic |
| AATTGAAATCATTCGAAATT+CGG | 0.300009 | 6_4:-2144745 | None:intergenic |
| GGACGGAGATCTAGAGGTTT+AGG | 0.305182 | 6_4:+2144351 | Msa0970590:CDS |
| TGGTGGAAATTCCAGGAAAA+TGG | 0.320222 | 6_4:+2144086 | Msa0970590:CDS |
| GAAGATGAAAAGAGTGTTAT+GGG | 0.321530 | 6_4:+2144129 | Msa0970590:CDS |
| TGGCAGTCTGCAGCCATTAT+GGG | 0.322578 | 6_4:-2144517 | None:intergenic |
| AGAAGATGAAAAGAGTGTTA+TGG | 0.333476 | 6_4:+2144128 | Msa0970590:CDS |
| TCCTTGAAAGACATGAAATC+AGG | 0.342062 | 6_4:+2144282 | Msa0970590:CDS |
| AACTAGATACGTCGACTCTT+TGG | 0.342449 | 6_4:-2144537 | None:intergenic |
| GAAACTGCAGGATATGTTAG+AGG | 0.388568 | 6_4:+2143937 | Msa0970590:intron |
| CTGAGATTGGTGGAAATTCC+AGG | 0.399094 | 6_4:+2144079 | Msa0970590:CDS |
| GTATCTTCAATGTATACAAT+TGG | 0.413544 | 6_4:-2144483 | None:intergenic |
| GTAAAACTTAGTGGCTCTGC+TGG | 0.418753 | 6_4:+2144258 | Msa0970590:CDS |
| TCCCGACCCCGCAGAAAATC+CGG | 0.427991 | 6_4:-2144027 | None:intergenic |
| ACAACTCGTCGTCCCCATAA+TGG | 0.428444 | 6_4:+2144504 | Msa0970590:CDS |
| AAAGGAAATGTAAAACTTAG+TGG | 0.428546 | 6_4:+2144249 | Msa0970590:CDS |
| TGTGAATGCAAGTGCTCGTC+CGG | 0.438860 | 6_4:+2144008 | Msa0970590:CDS |
| GCTATCTATCTCAGTTAGAA+AGG | 0.468861 | 6_4:+2144675 | Msa0970590:three_prime_UTR |
| ATTGTAATTTGAGTGGAAGA+AGG | 0.472266 | 6_4:-2144722 | None:intergenic |
| GTTACAGTGACCGATTCTAA+AGG | 0.474490 | 6_4:+2144231 | Msa0970590:CDS |
| GTGCAAGTTGGGGTTTGAGC+GGG | 0.480718 | 6_4:+2143968 | Msa0970590:CDS |
| GAAGAAGGAATTGAAATTTG+AGG | 0.481411 | 6_4:-2144707 | None:intergenic |
| AATGAAGAGATTGACGGCTA+TGG | 0.482399 | 6_4:-2138883 | None:intergenic |
| AATTGTGTTGTGTTGTGACT+AGG | 0.493198 | 6_4:+2144764 | Msa0970590:three_prime_UTR |
| CATCATGCTGGAAATGATAC+AGG | 0.497731 | 6_4:-2144167 | None:intergenic |
| TGCTGAAGCAACTGCGGAAG+TGG | 0.498444 | 6_4:+2144326 | Msa0970590:CDS |
| AGAATCGGTCACTGTAACAA+AGG | 0.511601 | 6_4:-2144226 | None:intergenic |
| GAACAAAATCAGCATCATGC+TGG | 0.519192 | 6_4:-2144179 | None:intergenic |
| GAGAATAATGCTGAGATTGG+TGG | 0.526522 | 6_4:+2144069 | Msa0970590:CDS |
| TTGTAGCAACATCTATTGAA+AGG | 0.526722 | 6_4:+2144653 | Msa0970590:three_prime_UTR |
| AGATTGACGGCTATGGATGA+AGG | 0.535592 | 6_4:-2138876 | None:intergenic |
| AGTGAGAATAATGCTGAGAT+TGG | 0.539267 | 6_4:+2144066 | Msa0970590:CDS |
| GTTGTGACTAGGCTATGTTA+TGG | 0.539397 | 6_4:+2144775 | Msa0970590:three_prime_UTR |
| AATTCGGATTGTAATTTGAG+TGG | 0.553403 | 6_4:-2144729 | None:intergenic |
| CAAGTTGGGGTTTGAGCGGG+AGG | 0.553465 | 6_4:+2143971 | Msa0970590:CDS |
| GGCAGTCTGCAGCCATTATG+GGG | 0.556364 | 6_4:-2144516 | None:intergenic |
| TAGAAAATACGTTCAACAGT+AGG | 0.556732 | 6_4:-2144571 | None:intergenic |
| TGAAGGAAGAACACAATTTG+CGG | 0.562090 | 6_4:-2138859 | None:intergenic |
| GAAGCAACTGCGGAAGTGGT+TGG | 0.563081 | 6_4:+2144330 | Msa0970590:CDS |
| ATGGAGAATGAAGAGATTGA+CGG | 0.563106 | 6_4:-2138889 | None:intergenic |
| ATTGTTGCTGCAGATTACTA+GGG | 0.563552 | 6_4:-2138833 | None:intergenic |
| AGCAATATTGAGCTGGAGGG+AGG | 0.568183 | 6_4:+2144431 | Msa0970590:CDS |
| TCTCACACCACCTTCTTCCA+AGG | 0.578505 | 6_4:+2138929 | Msa0970590:CDS |
| AAAGGCAAGCAATATTGAGC+TGG | 0.578900 | 6_4:+2144424 | Msa0970590:CDS |
| GTGGTTGGACGGAGATCTAG+AGG | 0.582119 | 6_4:+2144345 | Msa0970590:CDS |
| CCTTGAAAGACATGAAATCA+GGG | 0.583578 | 6_4:+2144283 | Msa0970590:CDS |
| AGTGCAAGTTGGGGTTTGAG+CGG | 0.585051 | 6_4:+2143967 | Msa0970590:CDS |
| GCAATATTGAGCTGGAGGGA+GGG | 0.589094 | 6_4:+2144432 | Msa0970590:CDS |
| CAACTGCGGAAGTGGTTGGA+CGG | 0.593288 | 6_4:+2144334 | Msa0970590:CDS |
| TCTGTTGTCATGAAAGTGAA+CGG | 0.595836 | 6_4:+2144381 | Msa0970590:CDS |
| AGGAAAATGGACTTTGTGAG+AGG | 0.596525 | 6_4:+2144099 | Msa0970590:CDS |
| GGCAAGCAATATTGAGCTGG+AGG | 0.597786 | 6_4:+2144427 | Msa0970590:CDS |
| TTACTAGGGTTTGAGATTTG+GGG | 0.606708 | 6_4:-2138819 | None:intergenic |
| GAGGGATTTACTGATTCTCG+AGG | 0.625322 | 6_4:+2144450 | Msa0970590:CDS |
| GAAAGTGTTACCTTGGAAGA+AGG | 0.628450 | 6_4:-2138939 | None:intergenic |
| AATGAAATATGTAAAATGGA+TGG | 0.629058 | 6_4:-2144803 | None:intergenic |
| GCAAGCAATATTGAGCTGGA+GGG | 0.647783 | 6_4:+2144428 | Msa0970590:CDS |
| GTATGCTGCTGAAGCAACTG+CGG | 0.658519 | 6_4:+2144320 | Msa0970590:CDS |
| AATATGTAAAATGGATGGTG+AGG | 0.664727 | 6_4:-2144798 | None:intergenic |
| GATGAAAAGAGTGTTATGGG+AGG | 0.673626 | 6_4:+2144132 | Msa0970590:CDS |
| GGTGGTGTGAGATTGAAGTG+TGG | 0.696440 | 6_4:-2138918 | None:intergenic |
| AGTGTTACCTTGGAAGAAGG+TGG | 0.718531 | 6_4:-2138936 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTCTTTAATTGTTAT+TGG | + | chr6_4:2139094-2139113 | Msa0970590:intron | 10.0% |
| !! | ATTTAACAATAATGAAATAT+TGG | + | chr6_4:2142227-2142246 | Msa0970590:intron | 10.0% |
| !!! | ATATATTTTACCATCAAATT+AGG | + | chr6_4:2139594-2139613 | Msa0970590:intron | 15.0% |
| !! | TTTCTTGATTTCATAAATTT+AGG | - | chr6_4:2139622-2139641 | None:intergenic | 15.0% |
| !! | TACAAAATATTGTTAAATAG+AGG | + | chr6_4:2139960-2139979 | Msa0970590:intron | 15.0% |
| !! | ACAAAATATTGTTAAATAGA+GGG | + | chr6_4:2139961-2139980 | Msa0970590:intron | 15.0% |
| !! | ACAAAAAGAAAATAAAAATC+AGG | - | chr6_4:2140099-2140118 | None:intergenic | 15.0% |
| !!! | TATAAGTTTTGTAAGATTTT+TGG | + | chr6_4:2141085-2141104 | Msa0970590:intron | 15.0% |
| !!! | ATAAGTTTTGTAAGATTTTT+GGG | + | chr6_4:2141086-2141105 | Msa0970590:intron | 15.0% |
| !!! | ATATATTTTACCATCAAATT+AGG | + | chr6_4:2139594-2139613 | Msa0970590:intron | 15.0% |
| !! | AAATCAATAAACTAGAAAAA+AGG | + | chr6_4:2141431-2141450 | Msa0970590:intron | 15.0% |
| !! | ATATATGTTATCATCAAATT+AGG | + | chr6_4:2141649-2141668 | Msa0970590:intron | 15.0% |
| !! | TACAAAATATTGTTAAATAG+CGG | + | chr6_4:2139960-2139979 | Msa0970590:intron | 15.0% |
| !!! | TATAGTTTTCATCTAAAATT+GGG | - | chr6_4:2142402-2142421 | None:intergenic | 15.0% |
| !!! | ATATAGTTTTCATCTAAAAT+TGG | - | chr6_4:2142403-2142422 | None:intergenic | 15.0% |
| !! | TTGTGTTAATTATATTAAGT+TGG | + | chr6_4:2143333-2143352 | Msa0970590:intron | 15.0% |
| !! | TGTGTTAATTATATTAAGTT+GGG | + | chr6_4:2143334-2143353 | Msa0970590:intron | 15.0% |
| !! | TCATAATGAAATATGTAAAA+TGG | - | chr6_4:2144810-2144829 | None:intergenic | 15.0% |
| !!! | ATAAGTTTTGTAAGATTGTT+TGG | + | chr6_4:2139276-2139295 | Msa0970590:intron | 20.0% |
| !!! | TAAGTTTTGTAAGATTGTTT+GGG | + | chr6_4:2139277-2139296 | Msa0970590:intron | 20.0% |
| !! | ATACATGATATCATCAAATT+AGG | + | chr6_4:2139849-2139868 | Msa0970590:intron | 20.0% |
| !!! | TTTTCTTTTTGTAGAAAGAT+TGG | + | chr6_4:2140107-2140126 | Msa0970590:intron | 20.0% |
| !! | TAAAGAAATTGGATTCTAAA+TGG | + | chr6_4:2140260-2140279 | Msa0970590:intron | 20.0% |
| !! | ATATATGGTATCATCAAATT+AGG | + | chr6_4:2140453-2140472 | Msa0970590:intron | 20.0% |
| !! | TACAAAATATTGTCAAATAG+CGG | + | chr6_4:2140802-2140821 | Msa0970590:intron | 20.0% |
| !!! | TTTATTGATTTCATCCATTT+AGG | - | chr6_4:2141422-2141441 | None:intergenic | 20.0% |
| !!! | TATTCTTTTTGTAGAAAGAT+TGG | + | chr6_4:2141926-2141945 | Msa0970590:intron | 20.0% |
| !!! | ATCTAATTTCATTCCTTTTT+GGG | + | chr6_4:2142478-2142497 | Msa0970590:intron | 20.0% |
| !!! | TTATTAGAGTTGATAAAAGA+AGG | + | chr6_4:2142523-2142542 | Msa0970590:intron | 20.0% |
| !!! | AAAAGGTTTAAAATCCATAT+GGG | - | chr6_4:2142658-2142677 | None:intergenic | 20.0% |
| !!! | TAAAAGGTTTAAAATCCATA+TGG | - | chr6_4:2142659-2142678 | None:intergenic | 20.0% |
| !! | TAAAGAATCAAAGTCATAAA+AGG | - | chr6_4:2142675-2142694 | None:intergenic | 20.0% |
| !! | TATCCTAATCAAATTAATCT+TGG | - | chr6_4:2142783-2142802 | None:intergenic | 20.0% |
| !!! | AGATTAATTTGATTAGGATA+TGG | + | chr6_4:2142783-2142802 | Msa0970590:intron | 20.0% |
| !! | AAGATGTGTTAAACAAAATA+GGG | + | chr6_4:2143151-2143170 | Msa0970590:intron | 20.0% |
| !!! | TTATTTTGTGAGACTAAATT+GGG | - | chr6_4:2143285-2143304 | None:intergenic | 20.0% |
| !!! | ATTATTTTGTGAGACTAAAT+TGG | - | chr6_4:2143286-2143305 | None:intergenic | 20.0% |
| !!! | TGGTTATTATTTTGAGTAAA+AGG | + | chr6_4:2143591-2143610 | Msa0970590:intron | 20.0% |
| !!! | ATTTTGTTCATATAAAGATG+CGG | + | chr6_4:2144193-2144212 | Msa0970590:CDS | 20.0% |
| !!! | TTTTACATTTCCTTTAGAAT+CGG | - | chr6_4:2144244-2144263 | None:intergenic | 20.0% |
| !! | AATTGAAATCATTCGAAATT+CGG | - | chr6_4:2144748-2144767 | None:intergenic | 20.0% |
| !! | AATGAAATATGTAAAATGGA+TGG | - | chr6_4:2144806-2144825 | None:intergenic | 20.0% |
| !! | GAGAGTGATAATCATTTTAA+AGG | - | chr6_4:2138774-2138793 | None:intergenic | 25.0% |
| !! | TTTTTAGATGTTTGCACTTT+TGG | + | chr6_4:2139049-2139068 | Msa0970590:intron | 25.0% |
| !! | TTTTAGATGTTTGCACTTTT+GGG | + | chr6_4:2139050-2139069 | Msa0970590:intron | 25.0% |
| ! | TATCAAATTACTATCAGTGT+CGG | - | chr6_4:2139213-2139232 | None:intergenic | 25.0% |
| !! | AATTTAGGATCCTAATTTGA+TGG | - | chr6_4:2139607-2139626 | None:intergenic | 25.0% |
| ! | GAAATCAAGAAACTAGAAAA+AGG | + | chr6_4:2139630-2139649 | Msa0970590:intron | 25.0% |
| ! | TTACTAGTTAGTGATAGATT+CGG | + | chr6_4:2139661-2139680 | Msa0970590:intron | 25.0% |
| ! | TTACAACTTTAGATCCTAAA+TGG | + | chr6_4:2140043-2140062 | Msa0970590:intron | 25.0% |
| !!! | TATTTCATTTTAGTGTACCT+AGG | + | chr6_4:2140161-2140180 | Msa0970590:intron | 25.0% |
| !!! | TGTCAATGTTCTAAAGAAAT+TGG | + | chr6_4:2140249-2140268 | Msa0970590:intron | 25.0% |
| ! | TAAAATCAAGAAAACTGGAA+AGG | + | chr6_4:2140284-2140303 | Msa0970590:intron | 25.0% |
| ! | TAAATCAAGAAACTGCAAAA+AGG | + | chr6_4:2140340-2140359 | Msa0970590:intron | 25.0% |
| ! | TACACAACTCATATCATATA+TGG | + | chr6_4:2139579-2139598 | Msa0970590:intron | 25.0% |
| ! | TACACAACTCATATCATATA+TGG | + | chr6_4:2139579-2139598 | Msa0970590:intron | 25.0% |
| ! | CTAAATAGCTGAATTCATTT+GGG | + | chr6_4:2140910-2140929 | Msa0970590:intron | 25.0% |
| ! | AAATAGAAGTGATCGTATAT+AGG | + | chr6_4:2141048-2141067 | Msa0970590:intron | 25.0% |
| ! | AATAGAAGTGATCGTATATA+GGG | + | chr6_4:2141049-2141068 | Msa0970590:intron | 25.0% |
| ! | AATAAGTTGTTTATCCAAAC+AGG | + | chr6_4:2139496-2139515 | Msa0970590:intron | 25.0% |
| !!! | TATTTGATTTTAATGCACGT+GGG | + | chr6_4:2141979-2141998 | Msa0970590:intron | 25.0% |
| !!! | CATAATATTTAGCTTGCATT+TGG | + | chr6_4:2142036-2142055 | Msa0970590:intron | 25.0% |
| ! | TCAACAAATTAGATCCTAAA+TGG | + | chr6_4:2142078-2142097 | Msa0970590:intron | 25.0% |
| ! | TCATTATTGTTAAATGAGCT+TGG | - | chr6_4:2142222-2142241 | None:intergenic | 25.0% |
| ! | AATATGATGCTATCAATTAG+TGG | + | chr6_4:2142323-2142342 | Msa0970590:intron | 25.0% |
| !! | CATCTAATTTCATTCCTTTT+TGG | + | chr6_4:2142477-2142496 | Msa0970590:intron | 25.0% |
| !! | TCTAATTTCATTCCTTTTTG+GGG | + | chr6_4:2142479-2142498 | Msa0970590:intron | 25.0% |
| ! | TTGCTAGTAAAAAATTAACC+TGG | + | chr6_4:2142619-2142638 | Msa0970590:intron | 25.0% |
| !! | TAGCCAAGATTAATTTGATT+AGG | + | chr6_4:2142777-2142796 | Msa0970590:intron | 25.0% |
| ! | CAAGATGTGTTAAACAAAAT+AGG | + | chr6_4:2143150-2143169 | Msa0970590:intron | 25.0% |
| ! | CTTATCAGTGTACTAATATT+CGG | + | chr6_4:2143222-2143241 | Msa0970590:intron | 25.0% |
| ! | GAAAATTGTAAGACCAAATT+GGG | - | chr6_4:2143256-2143275 | None:intergenic | 25.0% |
| ! | AGAAAATTGTAAGACCAAAT+TGG | - | chr6_4:2143257-2143276 | None:intergenic | 25.0% |
| ! | ACACAATTTGAAAATGTCAA+GGG | - | chr6_4:2143319-2143338 | None:intergenic | 25.0% |
| ! | AACACAATTTGAAAATGTCA+AGG | - | chr6_4:2143320-2143339 | None:intergenic | 25.0% |
| !!! | TAATCTTCTATTTCTATACC+TGG | - | chr6_4:2143430-2143449 | None:intergenic | 25.0% |
| ! | ATAATCACACAACCTTATTA+GGG | - | chr6_4:2143790-2143809 | None:intergenic | 25.0% |
| ! | TATAATCACACAACCTTATT+AGG | - | chr6_4:2143791-2143810 | None:intergenic | 25.0% |
| ! | TTATGCAATGACATGAAATA+TGG | - | chr6_4:2142969-2142988 | None:intergenic | 25.0% |
| ! | AAAGGAAATGTAAAACTTAG+TGG | + | chr6_4:2144249-2144268 | Msa0970590:CDS | 25.0% |
| ! | GTATCTTCAATGTATACAAT+TGG | - | chr6_4:2144486-2144505 | None:intergenic | 25.0% |
| ! | ATTACTAGGGTTTGAGATTT+GGG | - | chr6_4:2138823-2138842 | None:intergenic | 30.0% |
| ! | AGAATTTTCTATAAGCTACC+TGG | - | chr6_4:2139369-2139388 | None:intergenic | 30.0% |
| CAACACACACTTATGATTAT+GGG | - | chr6_4:2139522-2139541 | None:intergenic | 30.0% | |
| TCAACACACACTTATGATTA+TGG | - | chr6_4:2139523-2139542 | None:intergenic | 30.0% | |
| TATTACTAGTGTCTATGTGT+CGG | - | chr6_4:2139730-2139749 | None:intergenic | 30.0% | |
| CACTCTTTAACAACATTGTT+AGG | - | chr6_4:2139877-2139896 | None:intergenic | 30.0% | |
| ! | TATTTTGTACTAGTGTATCG+TGG | - | chr6_4:2139949-2139968 | None:intergenic | 30.0% |
| ATGGCTAAAATCAAGAAAAC+TGG | + | chr6_4:2140279-2140298 | Msa0970590:intron | 30.0% | |
| ATGCCTTCAATATGAAGTTT+AGG | + | chr6_4:2140412-2140431 | Msa0970590:intron | 30.0% | |
| TCTCTATTCACAACATTGTT+AGG | - | chr6_4:2140481-2140500 | None:intergenic | 30.0% | |
| ATGCCTTCAATATGAAGTTT+AGG | + | chr6_4:2140412-2140431 | Msa0970590:intron | 30.0% | |
| ACACCTAAACTTCATATTGA+AGG | - | chr6_4:2140654-2140673 | None:intergenic | 30.0% | |
| ! | GATTTGTTCAAATTTCGCTA+CGG | - | chr6_4:2140755-2140774 | None:intergenic | 30.0% |
| CCAAATGAATTCAGCTATTT+AGG | - | chr6_4:2140912-2140931 | None:intergenic | 30.0% | |
| CCTAAATAGCTGAATTCATT+TGG | + | chr6_4:2140909-2140928 | Msa0970590:intron | 30.0% | |
| !! | GTATATAGGGTCTTATTTAC+TGG | + | chr6_4:2141062-2141081 | Msa0970590:intron | 30.0% |
| ! | AGATCTTTTTATAAGCTACC+TGG | - | chr6_4:2141178-2141197 | None:intergenic | 30.0% |
| ! | CATTTAGGATCCTAATTTGA+TGG | - | chr6_4:2141407-2141426 | None:intergenic | 30.0% |
| CATCAAATTAGGATCCTAAA+TGG | + | chr6_4:2139605-2139624 | Msa0970590:intron | 30.0% | |
| ATGCCTTCAATATGAAGTTT+CGG | + | chr6_4:2140412-2140431 | Msa0970590:intron | 30.0% | |
| TCTCTATTCACAACATTGTT+AGG | - | chr6_4:2140481-2140500 | None:intergenic | 30.0% | |
| !! | GTTTTGTTCAAATTTCGCTA+CGG | - | chr6_4:2141724-2141743 | None:intergenic | 30.0% |
| TGACAACATTAGATCCTAAA+TGG | + | chr6_4:2141864-2141883 | Msa0970590:intron | 30.0% | |
| !! | GTATTTGATTTTAATGCACG+TGG | + | chr6_4:2141978-2141997 | Msa0970590:intron | 30.0% |
| TAAAGTCGAGAAAACAGAAA+AGG | + | chr6_4:2142102-2142121 | Msa0970590:intron | 30.0% | |
| AGTGATAGATAGTAATCAAC+AGG | + | chr6_4:2142134-2142153 | Msa0970590:intron | 30.0% | |
| ! | GTGAAATACACAGTGTTTTA+AGG | - | chr6_4:2142163-2142182 | None:intergenic | 30.0% |
| !!! | CGGTTTTTTTTTGGAAGTAA+AGG | + | chr6_4:2142811-2142830 | Msa0970590:intron | 30.0% |
| GTTTCTGTCAAAACAAGTAA+AGG | + | chr6_4:2142838-2142857 | Msa0970590:intron | 30.0% | |
| TGGAAAGACTAACTTAGAAT+TGG | + | chr6_4:2143033-2143052 | Msa0970590:intron | 30.0% | |
| TGAAGCTCATCAACATAAAT+GGG | - | chr6_4:2143093-2143112 | None:intergenic | 30.0% | |
| ATGAAGCTCATCAACATAAA+TGG | - | chr6_4:2143094-2143113 | None:intergenic | 30.0% | |
| TTTGTTTAACACATCTTGCT+TGG | - | chr6_4:2143148-2143167 | None:intergenic | 30.0% | |
| TCGACAAAAATTGTTAGATG+TGG | + | chr6_4:2143461-2143480 | Msa0970590:intron | 30.0% | |
| ATACCATTCTCACTAATTGT+TGG | + | chr6_4:2143512-2143531 | Msa0970590:intron | 30.0% | |
| AAACCAACAATTAGTGAGAA+TGG | - | chr6_4:2143518-2143537 | None:intergenic | 30.0% | |
| TCAATATTTGTGTTTGTGTG+TGG | + | chr6_4:2143663-2143682 | Msa0970590:intron | 30.0% | |
| TAATCACACAACCTTATTAG+GGG | - | chr6_4:2143789-2143808 | None:intergenic | 30.0% | |
| !! | AGAAGATGAAAAGAGTGTTA+TGG | + | chr6_4:2144128-2144147 | Msa0970590:CDS | 30.0% |
| !! | GAAGATGAAAAGAGTGTTAT+GGG | + | chr6_4:2144129-2144148 | Msa0970590:CDS | 30.0% |
| ! | TTACTCATTTTCGAAGGAAA+AGG | + | chr6_4:2144406-2144425 | Msa0970590:CDS | 30.0% |
| TAGAAAATACGTTCAACAGT+AGG | - | chr6_4:2144574-2144593 | None:intergenic | 30.0% | |
| AGATGTTGCTACAAAAATTC+TGG | - | chr6_4:2144647-2144666 | None:intergenic | 30.0% | |
| TTGTAGCAACATCTATTGAA+AGG | + | chr6_4:2144653-2144672 | Msa0970590:three_prime_UTR | 30.0% | |
| GAAGAAGGAATTGAAATTTG+AGG | - | chr6_4:2144710-2144729 | None:intergenic | 30.0% | |
| ATTGTAATTTGAGTGGAAGA+AGG | - | chr6_4:2144725-2144744 | None:intergenic | 30.0% | |
| AATTCGGATTGTAATTTGAG+TGG | - | chr6_4:2144732-2144751 | None:intergenic | 30.0% | |
| AATATGTAAAATGGATGGTG+AGG | - | chr6_4:2144801-2144820 | None:intergenic | 30.0% | |
| ! | TTACTAGGGTTTGAGATTTG+GGG | - | chr6_4:2138822-2138841 | None:intergenic | 35.0% |
| ! | GATTACTAGGGTTTGAGATT+TGG | - | chr6_4:2138824-2138843 | None:intergenic | 35.0% |
| ATTGTTGCTGCAGATTACTA+GGG | - | chr6_4:2138836-2138855 | None:intergenic | 35.0% | |
| TGAAGGAAGAACACAATTTG+CGG | - | chr6_4:2138862-2138881 | None:intergenic | 35.0% | |
| ATGGAGAATGAAGAGATTGA+CGG | - | chr6_4:2138892-2138911 | None:intergenic | 35.0% | |
| !! | AAAGTGTGAAAGTGTTACCT+TGG | - | chr6_4:2138949-2138968 | None:intergenic | 35.0% |
| AAGTGATCCTATTCGTATGT+AGG | + | chr6_4:2139238-2139257 | Msa0970590:intron | 35.0% | |
| AGTGATCCTATTCGTATGTA+GGG | + | chr6_4:2139239-2139258 | Msa0970590:intron | 35.0% | |
| ATAAGACCCTACATACGAAT+AGG | - | chr6_4:2139248-2139267 | None:intergenic | 35.0% | |
| !! | GTATGTAGGGTCTTATTTAC+TGG | + | chr6_4:2139252-2139271 | Msa0970590:intron | 35.0% |
| ! | TTATTTTCGTAAGTTCTGCC+AGG | + | chr6_4:2139348-2139367 | Msa0970590:intron | 35.0% |
| CTTATGATTATGGGTCTGTT+TGG | - | chr6_4:2139513-2139532 | None:intergenic | 35.0% | |
| ! | ATGCCTTTAATCTGAAGTGT+CGG | + | chr6_4:2139553-2139572 | Msa0970590:intron | 35.0% |
| CAAGAAACTAGAAAAAGGTG+TGG | + | chr6_4:2139635-2139654 | Msa0970590:intron | 35.0% | |
| ATAGTTGTGTTATACCGTAG+CGG | + | chr6_4:2139900-2139919 | Msa0970590:intron | 35.0% | |
| ! | GATTTGTTCAAATTCCGCTA+CGG | - | chr6_4:2139917-2139936 | None:intergenic | 35.0% |
| CCAAATGATTTCAGCCATTT+AGG | - | chr6_4:2140060-2140079 | None:intergenic | 35.0% | |
| CCTAAATGGCTGAAATCATT+TGG | + | chr6_4:2140057-2140076 | Msa0970590:intron | 35.0% | |
| TAGAAAGATTGGTGCAATAG+TGG | + | chr6_4:2140118-2140137 | Msa0970590:intron | 35.0% | |
| GTGAGTAGTGATAAATCCTT+TGG | + | chr6_4:2140317-2140336 | Msa0970590:intron | 35.0% | |
| GCAGTTTCTTGATTTACCAA+AGG | - | chr6_4:2140336-2140355 | None:intergenic | 35.0% | |
| GCACCTAAACTTCATATTGA+AGG | - | chr6_4:2140418-2140437 | None:intergenic | 35.0% | |
| ! | GCTTTGTTCAAATTTCGCTA+CGG | - | chr6_4:2140528-2140547 | None:intergenic | 35.0% |
| TTGTACTAAGTAGTGTATCG+CGG | - | chr6_4:2140787-2140806 | None:intergenic | 35.0% | |
| CAGCCTATGATATTGTTCAT+CGG | + | chr6_4:2141123-2141142 | Msa0970590:intron | 35.0% | |
| CAACCGATGAACAATATCAT+AGG | - | chr6_4:2141129-2141148 | None:intergenic | 35.0% | |
| ! | TTATTTTCGTATGTTCTGCC+AGG | + | chr6_4:2141157-2141176 | Msa0970590:intron | 35.0% |
| ACGCCTTTAATATGAAGTGT+CGG | + | chr6_4:2141358-2141377 | Msa0970590:intron | 35.0% | |
| AAGGTGTAGTAGTTACTAGT+TGG | + | chr6_4:2141450-2141469 | Msa0970590:intron | 35.0% | |
| TATTGCTGATGTATATGCGT+CGG | - | chr6_4:2141531-2141550 | None:intergenic | 35.0% | |
| GTTGTGAATAGAGATTGTAG+TGG | + | chr6_4:2141683-2141702 | Msa0970590:intron | 35.0% | |
| CTAAATGGCTGAAGTCATTT+GGG | + | chr6_4:2141879-2141898 | Msa0970590:intron | 35.0% | |
| TTTCTCGACTTTAGCCATTT+AGG | - | chr6_4:2142095-2142114 | None:intergenic | 35.0% | |
| TCGAGAAAACAGAAAAGGAT+CGG | + | chr6_4:2142107-2142126 | Msa0970590:intron | 35.0% | |
| !!! | AATCCTTTGAGCTAGCTTTT+GGG | + | chr6_4:2142188-2142207 | Msa0970590:intron | 35.0% |
| ATATCTGTGATTCACATCAG+TGG | + | chr6_4:2142269-2142288 | Msa0970590:intron | 35.0% | |
| TATCACTGAATGAATGCTCT+TGG | + | chr6_4:2142365-2142384 | Msa0970590:intron | 35.0% | |
| AAAATTCCTGTCAGACAGTT+TGG | + | chr6_4:2142432-2142451 | Msa0970590:intron | 35.0% | |
| AAATTCCTGTCAGACAGTTT+GGG | + | chr6_4:2142433-2142452 | Msa0970590:intron | 35.0% | |
| TGAGAACTTAATCCCCAAAA+AGG | - | chr6_4:2142494-2142513 | None:intergenic | 35.0% | |
| TTGATTAGGATATGGCTTGA+CGG | + | chr6_4:2142791-2142810 | Msa0970590:intron | 35.0% | |
| !!! | ATGGCTTGACGGTTTTTTTT+TGG | + | chr6_4:2142802-2142821 | Msa0970590:intron | 35.0% |
| ATAATGATACACGCAAAGAG+TGG | + | chr6_4:2143013-2143032 | Msa0970590:intron | 35.0% | |
| ! | TTGATGAGCTTCATAGCTTT+TGG | + | chr6_4:2143100-2143119 | Msa0970590:intron | 35.0% |
| GAGAAAGCAACTTAGGAATT+TGG | + | chr6_4:2143175-2143194 | Msa0970590:intron | 35.0% | |
| ATTAGTACACTGATAAGCTG+AGG | - | chr6_4:2143219-2143238 | None:intergenic | 35.0% | |
| AGCAAGCTCAGCATATAATT+TGG | + | chr6_4:2143571-2143590 | Msa0970590:intron | 35.0% | |
| TGTGAAAAGAAGAGTGAAGA+TGG | + | chr6_4:2143759-2143778 | Msa0970590:intron | 35.0% | |
| TTTCATACTCTTGAAACTGC+AGG | + | chr6_4:2143925-2143944 | Msa0970590:intron | 35.0% | |
| ! | CTCAGCATTATTCTCACTTT+TGG | - | chr6_4:2144064-2144083 | None:intergenic | 35.0% |
| AGTGAGAATAATGCTGAGAT+TGG | + | chr6_4:2144066-2144085 | Msa0970590:CDS | 35.0% | |
| TCCTTGAAAGACATGAAATC+AGG | + | chr6_4:2144282-2144301 | Msa0970590:CDS | 35.0% | |
| CCTTGAAAGACATGAAATCA+GGG | + | chr6_4:2144283-2144302 | Msa0970590:CDS | 35.0% | |
| TCTGTTGTCATGAAAGTGAA+CGG | + | chr6_4:2144381-2144400 | Msa0970590:CDS | 35.0% | |
| ! | ACGGATTTACTCATTTTCGA+AGG | + | chr6_4:2144400-2144419 | Msa0970590:CDS | 35.0% |
| GCTATCTATCTCAGTTAGAA+AGG | + | chr6_4:2144675-2144694 | Msa0970590:three_prime_UTR | 35.0% | |
| AATTGTGTTGTGTTGTGACT+AGG | + | chr6_4:2144764-2144783 | Msa0970590:three_prime_UTR | 35.0% | |
| CATTGTTGCTGCAGATTACT+AGG | - | chr6_4:2138837-2138856 | None:intergenic | 40.0% | |
| AATGAAGAGATTGACGGCTA+TGG | - | chr6_4:2138886-2138905 | None:intergenic | 40.0% | |
| !!! | GATTGAAGTGTGGTTTTGGA+TGG | - | chr6_4:2138911-2138930 | None:intergenic | 40.0% |
| ! | GTGAGATTGAAGTGTGGTTT+TGG | - | chr6_4:2138915-2138934 | None:intergenic | 40.0% |
| !! | GAAAGTGTTACCTTGGAAGA+AGG | - | chr6_4:2138942-2138961 | None:intergenic | 40.0% |
| ! | GAAACTAGAAAAAGGTGTGG+TGG | + | chr6_4:2139638-2139657 | Msa0970590:intron | 40.0% |
| ATGTCTTCAATCTGCAGTGT+TGG | + | chr6_4:2139808-2139827 | Msa0970590:intron | 40.0% | |
| !! | AGATTGGTGCAATAGTGGAT+CGG | + | chr6_4:2140123-2140142 | Msa0970590:intron | 40.0% |
| CAAGAAACTGCAAAAAGGTG+TGG | + | chr6_4:2140345-2140364 | Msa0970590:intron | 40.0% | |
| GTTGTGAATAGAGACTGTAG+TGG | + | chr6_4:2140487-2140506 | Msa0970590:intron | 40.0% | |
| GTTGTGAATAGAGACTGTAG+TGG | + | chr6_4:2140487-2140506 | Msa0970590:intron | 40.0% | |
| ! | GCACCGACACTTCATATTAA+AGG | - | chr6_4:2141364-2141383 | None:intergenic | 40.0% |
| GCACCGAAACTTCATATTGA+AGG | - | chr6_4:2141614-2141633 | None:intergenic | 40.0% | |
| TTGTTCCACGATACACTACT+TGG | + | chr6_4:2141748-2141767 | Msa0970590:intron | 40.0% | |
| TTGTACCAAGTAGTGTATCG+TGG | - | chr6_4:2141756-2141775 | None:intergenic | 40.0% | |
| CCAAATGACTTCAGCCATTT+AGG | - | chr6_4:2141881-2141900 | None:intergenic | 40.0% | |
| CCTAAATGGCTGAAGTCATT+TGG | + | chr6_4:2141878-2141897 | Msa0970590:intron | 40.0% | |
| TAGAAAGATTGGCGCAATAG+TGG | + | chr6_4:2141937-2141956 | Msa0970590:intron | 40.0% | |
| !!! | CAATCCTTTGAGCTAGCTTT+TGG | + | chr6_4:2142187-2142206 | Msa0970590:intron | 40.0% |
| ! | TTGGCTCTTATCAAGTTTGC+TGG | + | chr6_4:2142246-2142265 | Msa0970590:intron | 40.0% |
| ! | CATCAGTGGTCAACCAATTT+TGG | + | chr6_4:2142283-2142302 | Msa0970590:intron | 40.0% |
| GACTACTGATCCACCAAAAT+TGG | - | chr6_4:2142299-2142318 | None:intergenic | 40.0% | |
| ! | GAATGCTCTTGGTTAGTTGT+AGG | + | chr6_4:2142376-2142395 | Msa0970590:intron | 40.0% |
| ! | GTGCTTTGTGCTTTGTTACT+TGG | - | chr6_4:2142558-2142577 | None:intergenic | 40.0% |
| ! | AAATTAACCTGGCTTTCCAC+AGG | + | chr6_4:2142630-2142649 | Msa0970590:intron | 40.0% |
| AAAATCCATATGGGAACCTG+TGG | - | chr6_4:2142649-2142668 | None:intergenic | 40.0% | |
| CACGCAACAACTATCAATAG+AGG | + | chr6_4:2142698-2142717 | Msa0970590:intron | 40.0% | |
| TGTCAAAACAAGTAAAGGCG+TGG | + | chr6_4:2142843-2142862 | Msa0970590:intron | 40.0% | |
| ATAGGGAGAGAAAGCAACTT+AGG | + | chr6_4:2143168-2143187 | Msa0970590:intron | 40.0% | |
| AGTGAGAATGGTATCGTCTA+AGG | - | chr6_4:2143506-2143525 | None:intergenic | 40.0% | |
| GAACTGCGAGAAAATTGTGA+AGG | + | chr6_4:2143621-2143640 | Msa0970590:intron | 40.0% | |
| ! | TTCTTTTCACATAACGCAGC+AGG | - | chr6_4:2143750-2143769 | None:intergenic | 40.0% |
| AAGATGGTTGACCCCTAATA+AGG | + | chr6_4:2143775-2143794 | Msa0970590:intron | 40.0% | |
| GAAACTGCAGGATATGTTAG+AGG | + | chr6_4:2143937-2143956 | Msa0970590:intron | 40.0% | |
| !!! | AGGATTTTCGAGTGCAAGTT+GGG | + | chr6_4:2143957-2143976 | Msa0970590:CDS | 40.0% |
| GAGAATAATGCTGAGATTGG+TGG | + | chr6_4:2144069-2144088 | Msa0970590:CDS | 40.0% | |
| TGGTGGAAATTCCAGGAAAA+TGG | + | chr6_4:2144086-2144105 | Msa0970590:CDS | 40.0% | |
| ! | TCTCACAAAGTCCATTTTCC+TGG | - | chr6_4:2144100-2144119 | None:intergenic | 40.0% |
| ! | AGGAAAATGGACTTTGTGAG+AGG | + | chr6_4:2144099-2144118 | Msa0970590:CDS | 40.0% |
| !! | GATGAAAAGAGTGTTATGGG+AGG | + | chr6_4:2144132-2144151 | Msa0970590:CDS | 40.0% |
| CATCATGCTGGAAATGATAC+AGG | - | chr6_4:2144170-2144189 | None:intergenic | 40.0% | |
| GAACAAAATCAGCATCATGC+TGG | - | chr6_4:2144182-2144201 | None:intergenic | 40.0% | |
| AGAATCGGTCACTGTAACAA+AGG | - | chr6_4:2144229-2144248 | None:intergenic | 40.0% | |
| ! | GTTACAGTGACCGATTCTAA+AGG | + | chr6_4:2144231-2144250 | Msa0970590:CDS | 40.0% |
| CCCTGATTTCATGTCTTTCA+AGG | - | chr6_4:2144286-2144305 | None:intergenic | 40.0% | |
| AATCAGGGCAAAAGCTTTCT+AGG | + | chr6_4:2144298-2144317 | Msa0970590:CDS | 40.0% | |
| AAAGGCAAGCAATATTGAGC+TGG | + | chr6_4:2144424-2144443 | Msa0970590:CDS | 40.0% | |
| !! | AACTAGATACGTCGACTCTT+TGG | - | chr6_4:2144540-2144559 | None:intergenic | 40.0% |
| GTTGTGACTAGGCTATGTTA+TGG | + | chr6_4:2144775-2144794 | Msa0970590:three_prime_UTR | 40.0% | |
| AGATTGACGGCTATGGATGA+AGG | - | chr6_4:2138879-2138898 | None:intergenic | 45.0% | |
| AGTGTTACCTTGGAAGAAGG+TGG | - | chr6_4:2138939-2138958 | None:intergenic | 45.0% | |
| !! | ATCAGTGTCGGTGTTTGTGT+TGG | - | chr6_4:2139201-2139220 | None:intergenic | 45.0% |
| ! | GCACCGACACTTCAGATTAA+AGG | - | chr6_4:2139559-2139578 | None:intergenic | 45.0% |
| AGTTGTAAAGCGCAGATTGC+AGG | - | chr6_4:2140031-2140050 | None:intergenic | 45.0% | |
| !! | GTGCAATAGTGGATCGGATT+AGG | + | chr6_4:2140129-2140148 | Msa0970590:intron | 45.0% |
| ! | GAAACTGCAAAAAGGTGTGG+TGG | + | chr6_4:2140348-2140367 | Msa0970590:intron | 45.0% |
| !! | GCGCAATAGTGGATACGATT+AGG | + | chr6_4:2141948-2141967 | Msa0970590:intron | 45.0% |
| ACTCCCAAAAGCTAGCTCAA+AGG | - | chr6_4:2142194-2142213 | None:intergenic | 45.0% | |
| ! | CAGTGGTCAACCAATTTTGG+TGG | + | chr6_4:2142286-2142305 | Msa0970590:intron | 45.0% |
| GTAGAGTGCAGGATATAGAG+TGG | + | chr6_4:2143066-2143085 | Msa0970590:intron | 45.0% | |
| TTTGGCATGTCCTAGTGTCA+CGG | + | chr6_4:2143193-2143212 | Msa0970590:intron | 45.0% | |
| TTCGGAGTGAAGACCCAATT+TGG | + | chr6_4:2143240-2143259 | Msa0970590:intron | 45.0% | |
| CACAGTTCATGACTCATGAG+AGG | - | chr6_4:2143370-2143389 | None:intergenic | 45.0% | |
| CGTCACATTGCTTTGCTAGT+TGG | - | chr6_4:2143397-2143416 | None:intergenic | 45.0% | |
| ATGTGACGTGTGTTGTATCC+AGG | + | chr6_4:2143409-2143428 | Msa0970590:intron | 45.0% | |
| !! | TATGCTGAGCTTGCTGTTGA+AGG | - | chr6_4:2143566-2143585 | None:intergenic | 45.0% |
| !!! | GAGGATTTTCGAGTGCAAGT+TGG | + | chr6_4:2143956-2143975 | Msa0970590:CDS | 45.0% |
| !!! | GGATTTTCGAGTGCAAGTTG+GGG | + | chr6_4:2143958-2143977 | Msa0970590:CDS | 45.0% |
| CTGAGATTGGTGGAAATTCC+AGG | + | chr6_4:2144079-2144098 | Msa0970590:CDS | 45.0% | |
| ! | GTAAAACTTAGTGGCTCTGC+TGG | + | chr6_4:2144258-2144277 | Msa0970590:CDS | 45.0% |
| GCAAGCAATATTGAGCTGGA+GGG | + | chr6_4:2144428-2144447 | Msa0970590:CDS | 45.0% | |
| !! | GAGGGATTTACTGATTCTCG+AGG | + | chr6_4:2144450-2144469 | Msa0970590:CDS | 45.0% |
| !!! | TTTTATCATTATTTTTTTAT+TGG | + | chr6_4:2138998-2139017 | Msa0970590:intron | 5.0% |
| !!! | TTTATCATTATTTTTTTATT+GGG | + | chr6_4:2138999-2139018 | Msa0970590:intron | 5.0% |
| !!! | ATTTTTAATCTAAAATTTTA+AGG | - | chr6_4:2142897-2142916 | None:intergenic | 5.0% |
| GGTGGTGTGAGATTGAAGTG+TGG | - | chr6_4:2138921-2138940 | None:intergenic | 50.0% | |
| TCTCACACCACCTTCTTCCA+AGG | + | chr6_4:2138929-2138948 | Msa0970590:CDS | 50.0% | |
| GTACCTAGGTTGTGTGTGCT+TGG | + | chr6_4:2140175-2140194 | Msa0970590:intron | 50.0% | |
| GTCAGTGTCAGTGTCAGCAT+CGG | - | chr6_4:2140552-2140571 | None:intergenic | 50.0% | |
| AGCAGTGTCCACGTTTGTGT+CGG | - | chr6_4:2141016-2141035 | None:intergenic | 50.0% | |
| AAACAGGCCCATACTCACCA+GGG | + | chr6_4:2141317-2141336 | Msa0970590:intron | 50.0% | |
| CAACACACCCTGGTGAGTAT+GGG | - | chr6_4:2141327-2141346 | None:intergenic | 50.0% | |
| TCAACACACCCTGGTGAGTA+TGG | - | chr6_4:2141328-2141347 | None:intergenic | 50.0% | |
| TGTTGTCAAGCGCAGATTGC+AGG | - | chr6_4:2141852-2141871 | None:intergenic | 50.0% | |
| GCTTTCCACAGGTTCCCATA+TGG | + | chr6_4:2142641-2142660 | Msa0970590:intron | 50.0% | |
| GTGACATCAGTGTAGAGTGC+AGG | + | chr6_4:2143055-2143074 | Msa0970590:intron | 50.0% | |
| TCACATAACGCAGCAGGCAA+AGG | - | chr6_4:2143744-2143763 | None:intergenic | 50.0% | |
| ! | AGTGCAAGTTGGGGTTTGAG+CGG | + | chr6_4:2143967-2143986 | Msa0970590:CDS | 50.0% |
| TGTGAATGCAAGTGCTCGTC+CGG | + | chr6_4:2144008-2144027 | Msa0970590:CDS | 50.0% | |
| GTATGCTGCTGAAGCAACTG+CGG | + | chr6_4:2144320-2144339 | Msa0970590:CDS | 50.0% | |
| GGACGGAGATCTAGAGGTTT+AGG | + | chr6_4:2144351-2144370 | Msa0970590:CDS | 50.0% | |
| GGCAAGCAATATTGAGCTGG+AGG | + | chr6_4:2144427-2144446 | Msa0970590:CDS | 50.0% | |
| AGCAATATTGAGCTGGAGGG+AGG | + | chr6_4:2144431-2144450 | Msa0970590:CDS | 50.0% | |
| GCAATATTGAGCTGGAGGGA+GGG | + | chr6_4:2144432-2144451 | Msa0970590:CDS | 50.0% | |
| ACAACTCGTCGTCCCCATAA+TGG | + | chr6_4:2144504-2144523 | Msa0970590:CDS | 50.0% | |
| TGGCAGTCTGCAGCCATTAT+GGG | - | chr6_4:2144520-2144539 | None:intergenic | 50.0% | |
| TTGGCAGTCTGCAGCCATTA+TGG | - | chr6_4:2144521-2144540 | None:intergenic | 50.0% | |
| GAGCCAAGCACACACAACCT+AGG | - | chr6_4:2140181-2140200 | None:intergenic | 55.0% | |
| TGTTGTCAAGCGCAGATCGC+AGG | - | chr6_4:2140883-2140902 | None:intergenic | 55.0% | |
| !! | GTGAAGCACCGACACAAACG+TGG | + | chr6_4:2141005-2141024 | Msa0970590:intron | 55.0% |
| CTGGTGAGTATGGGCCTGTT+TGG | - | chr6_4:2141318-2141337 | None:intergenic | 55.0% | |
| CAAACAGGCCCATACTCACC+AGG | + | chr6_4:2141316-2141335 | Msa0970590:intron | 55.0% | |
| ! | TCGAAGTGCTCAACACACCC+TGG | - | chr6_4:2141337-2141356 | None:intergenic | 55.0% |
| CACTGCCCAAACTGTCTGAC+AGG | - | chr6_4:2142441-2142460 | None:intergenic | 55.0% | |
| ATGGGAACCTGTGGAAAGCC+AGG | - | chr6_4:2142640-2142659 | None:intergenic | 55.0% | |
| TAAGCTGAGGCCGTGACACT+AGG | - | chr6_4:2143206-2143225 | None:intergenic | 55.0% | |
| ! | GTGCAAGTTGGGGTTTGAGC+GGG | + | chr6_4:2143968-2143987 | Msa0970590:CDS | 55.0% |
| ! | GTGCTCGTCCGGATTTTCTG+CGG | + | chr6_4:2144019-2144038 | Msa0970590:CDS | 55.0% |
| ! | TGCTCGTCCGGATTTTCTGC+GGG | + | chr6_4:2144020-2144039 | Msa0970590:CDS | 55.0% |
| TGCTGAAGCAACTGCGGAAG+TGG | + | chr6_4:2144326-2144345 | Msa0970590:CDS | 55.0% | |
| GAAGCAACTGCGGAAGTGGT+TGG | + | chr6_4:2144330-2144349 | Msa0970590:CDS | 55.0% | |
| CAACTGCGGAAGTGGTTGGA+CGG | + | chr6_4:2144334-2144353 | Msa0970590:CDS | 55.0% | |
| GTGGTTGGACGGAGATCTAG+AGG | + | chr6_4:2144345-2144364 | Msa0970590:CDS | 55.0% | |
| GGCAGTCTGCAGCCATTATG+GGG | - | chr6_4:2144519-2144538 | None:intergenic | 55.0% | |
| ! | GCACGTGGGTTGTGTGTGCT+TGG | + | chr6_4:2141993-2142012 | Msa0970590:intron | 60.0% |
| ! | CAAGTTGGGGTTTGAGCGGG+AGG | + | chr6_4:2143971-2143990 | Msa0970590:CDS | 60.0% |
| ! | GCTCGTCCGGATTTTCTGCG+GGG | + | chr6_4:2144021-2144040 | Msa0970590:CDS | 60.0% |
| ! | GTCCGGATTTTCTGCGGGGT+CGG | + | chr6_4:2144025-2144044 | Msa0970590:CDS | 60.0% |
| ! | TCCGGATTTTCTGCGGGGTC+GGG | + | chr6_4:2144026-2144045 | Msa0970590:CDS | 60.0% |
| TCCCGACCCCGCAGAAAATC+CGG | - | chr6_4:2144030-2144049 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 2138719 | 2144840 | 2138719 | ID=Msa0970590;Name=Msa0970590 |
| chr6_4 | mRNA | 2138719 | 2144840 | 2138719 | ID=Msa0970590-mRNA-1;Parent=Msa0970590;Name=Msa0970590-mRNA-1;_AED=0.01;_eAED=0.01;_QI=135|1|1|1|1|1|2|283|235 |
| chr6_4 | exon | 2138719 | 2138950 | 2138719 | ID=Msa0970590-mRNA-1:exon:1023;Parent=Msa0970590-mRNA-1 |
| chr6_4 | exon | 2143947 | 2144840 | 2143947 | ID=Msa0970590-mRNA-1:exon:1024;Parent=Msa0970590-mRNA-1 |
| chr6_4 | five_prime_UTR | 2138719 | 2138853 | 2138719 | ID=Msa0970590-mRNA-1:five_prime_utr;Parent=Msa0970590-mRNA-1 |
| chr6_4 | CDS | 2138854 | 2138950 | 2138854 | ID=Msa0970590-mRNA-1:cds;Parent=Msa0970590-mRNA-1 |
| chr6_4 | CDS | 2143947 | 2144557 | 2143947 | ID=Msa0970590-mRNA-1:cds;Parent=Msa0970590-mRNA-1 |
| chr6_4 | three_prime_UTR | 2144558 | 2144840 | 2144558 | ID=Msa0970590-mRNA-1:three_prime_utr;Parent=Msa0970590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
