Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0970890 | XP_003618179.1 | 90.985 | 477 | 21 | 9 | 1 | 468 | 1 | 464 | 0.0 | 856 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0970890 | sp|Q8LPJ5|ICDHP_ARATH | 80.607 | 428 | 61 | 5 | 55 | 468 | 48 | 467 | 0.0 | 712 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0970890 | G7KHI5 | 90.985 | 477 | 21 | 9 | 1 | 468 | 1 | 464 | 0.0 | 856 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0970890 | Msa0970930 | 0.922120 | 1.484973e-88 | -8.615850e-47 |
| Msa0970890 | Msa1158640 | 0.823543 | 1.309291e-53 | -8.615850e-47 |
| Msa0970890 | Msa1160110 | 0.803651 | 3.149386e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0970890 | MtrunA17_Chr6g0449881 | 90.985 | 477 | 21 | 9 | 1 | 468 | 1 | 464 | 0.0 | 856 |
| Msa0970890 | MtrunA17_Chr5g0433901 | 77.556 | 401 | 76 | 4 | 74 | 468 | 6 | 398 | 0.0 | 635 |
| Msa0970890 | MtrunA17_Chr2g0309401 | 76.060 | 401 | 82 | 4 | 74 | 468 | 6 | 398 | 0.0 | 629 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0970890 | AT5G14590.1 | 80.607 | 428 | 61 | 5 | 55 | 468 | 48 | 467 | 0.0 | 712 |
| Msa0970890 | AT1G54340.1 | 75.000 | 400 | 87 | 3 | 74 | 468 | 6 | 397 | 0.0 | 623 |
| Msa0970890 | AT1G65930.1 | 75.062 | 401 | 84 | 5 | 74 | 468 | 6 | 396 | 0.0 | 616 |
| Msa0970890 | AT1G54340.2 | 74.000 | 300 | 65 | 3 | 74 | 368 | 6 | 297 | 9.38e-163 | 462 |
Find 139 sgRNAs with CRISPR-Local
Find 433 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATGCTTTCCTAACATTCT+AGG | 0.153931 | 6_4:-2539157 | None:intergenic |
| GGGTATATTGCGGCATATTA+TGG | 0.223017 | 6_4:-2535944 | None:intergenic |
| CCAAAGTCCCAAAGAATAAT+TGG | 0.239083 | 6_4:-2539206 | None:intergenic |
| TAAATTGTCCAATTATTCTT+TGG | 0.243027 | 6_4:+2539198 | Msa0970890:three_prime_UTR |
| GACATTACCAGAAATAATTC+TGG | 0.266401 | 6_4:-2535965 | None:intergenic |
| CAGATTTAAAGACATATTTC+AGG | 0.273780 | 6_4:+2536705 | Msa0970890:intron |
| CTGGAGCGTCGCCGTCTTCT+GGG | 0.277774 | 6_4:-2536294 | None:intergenic |
| GGGAAGCTTAAGCTGGTATT+TGG | 0.283456 | 6_4:+2536156 | Msa0970890:CDS |
| GAGACCCGAGTCAAAGAATT+TGG | 0.286449 | 6_4:+2534870 | Msa0970890:CDS |
| CTTTGCTGAGAAAGTTAAAT+TGG | 0.296379 | 6_4:+2533700 | Msa0970890:intron |
| AAATCACAGCCAACGTATAT+CGG | 0.306906 | 6_4:+2539284 | Msa0970890:three_prime_UTR |
| ATGAAATGACAAGGATTATA+TGG | 0.309197 | 6_4:+2532234 | Msa0970890:CDS |
| AAAGTGAAGGTGGGTATGTC+TGG | 0.310572 | 6_4:+2536910 | Msa0970890:CDS |
| CCAATTATTCTTTGGGACTT+TGG | 0.315222 | 6_4:+2539206 | Msa0970890:three_prime_UTR |
| AATATACCCAGAATTATTTC+TGG | 0.315808 | 6_4:+2535958 | Msa0970890:CDS |
| GAATGGAAGAGAAGGTTGTT+AGG | 0.318076 | 6_4:-2531959 | None:intergenic |
| GCATGCCTACCAATACAAAT+TGG | 0.320367 | 6_4:-2536087 | None:intergenic |
| GATCTTGCCCTTCTGATTCA+TGG | 0.323534 | 6_4:+2538483 | Msa0970890:CDS |
| AAATTGTCCAATTATTCTTT+GGG | 0.336437 | 6_4:+2539199 | Msa0970890:three_prime_UTR |
| AGTTTGAAGAACACTCAATA+TGG | 0.356857 | 6_4:+2536755 | Msa0970890:CDS |
| ATGTTCCTTATTGTTCCATT+GGG | 0.363670 | 6_4:-2534915 | None:intergenic |
| AATCAGAAGGGCAAGATCTT+TGG | 0.363956 | 6_4:-2538478 | None:intergenic |
| AATCCTAGCCCTAGAATGTT+AGG | 0.365987 | 6_4:+2539148 | Msa0970890:three_prime_UTR |
| GGTATATTGCGGCATATTAT+GGG | 0.383958 | 6_4:-2535943 | None:intergenic |
| CGCTAATCCAATCGTCGAAA+TGG | 0.387210 | 6_4:+2532114 | Msa0970890:CDS |
| TTAAATTGGAAGGTGCAATT+AGG | 0.391826 | 6_4:+2533714 | Msa0970890:CDS |
| TGGATTTGTGCAGGGTGTCC+AGG | 0.395318 | 6_4:+2539007 | Msa0970890:intron |
| AATGTTCCTTATTGTTCCAT+TGG | 0.398523 | 6_4:-2534916 | None:intergenic |
| GCAGCTTATCTTTCCTTACT+TGG | 0.398625 | 6_4:+2533492 | Msa0970890:intron |
| CATACATGTTAGACTGTTGC+AGG | 0.400602 | 6_4:-2539097 | None:intergenic |
| TTGATGATTTAGTGCATGTT+TGG | 0.406729 | 6_4:+2539568 | Msa0970890:three_prime_UTR |
| CAGTCCAAATTCTTTGACTC+GGG | 0.407260 | 6_4:-2534874 | None:intergenic |
| ATTGCGATTGTGATTATTGA+AGG | 0.411352 | 6_4:-2532035 | None:intergenic |
| CAGTAGTGTTTGCCTATGTT+TGG | 0.416416 | 6_4:-2539327 | None:intergenic |
| TTCAGGAGGTTTATGAAGAA+AGG | 0.418139 | 6_4:+2536722 | Msa0970890:CDS |
| TGTGCAGGATTCGGCTCATT+GGG | 0.424875 | 6_4:+2537796 | Msa0970890:intron |
| AATGGAAGAGAAGGTTGTTA+GGG | 0.425670 | 6_4:-2531958 | None:intergenic |
| TGGAAGAAACCAATTTGTAT+TGG | 0.432227 | 6_4:+2536078 | Msa0970890:CDS |
| GTGTGCAGGATTCGGCTCAT+TGG | 0.439024 | 6_4:+2537795 | Msa0970890:intron |
| TTTATGTTCAAATCCAAGTA+AGG | 0.439169 | 6_4:-2533505 | None:intergenic |
| TGTATTGGTAGGCATGCTTT+TGG | 0.443034 | 6_4:+2536093 | Msa0970890:CDS |
| TTACCGTCCATTTCGACGAT+TGG | 0.444726 | 6_4:-2532121 | None:intergenic |
| TTTCCTAACATTCTAGGGCT+AGG | 0.446110 | 6_4:-2539151 | None:intergenic |
| GAAGCCCCAATGGAACAATA+AGG | 0.446836 | 6_4:+2534910 | Msa0970890:CDS |
| AATGCTTTCCTAACATTCTA+GGG | 0.452269 | 6_4:-2539156 | None:intergenic |
| AACTGGAGTGGCAGCTGGAA+TGG | 0.453158 | 6_4:+2539515 | Msa0970890:three_prime_UTR |
| GATTGGATTAGCGACATGAA+TGG | 0.457803 | 6_4:-2532104 | None:intergenic |
| GACACTAAGAATGGGGAAGC+AGG | 0.458019 | 6_4:-2539235 | None:intergenic |
| GGACACGAGGACTGGAACAT+AGG | 0.467878 | 6_4:+2538073 | Msa0970890:CDS |
| TACAGTTCCATGAGCTGCCT+CGG | 0.471319 | 6_4:-2537980 | None:intergenic |
| TGAAGCAATACTGTTCGTAC+TGG | 0.478811 | 6_4:-2538040 | None:intergenic |
| ATGGAAGATGATCAAGGATA+AGG | 0.491495 | 6_4:+2532253 | Msa0970890:CDS |
| CTGCAACAGTCTAACATGTA+TGG | 0.492491 | 6_4:+2539098 | Msa0970890:three_prime_UTR |
| AAGAAGAAGCGAAGCATCGA+AGG | 0.496959 | 6_4:-2532072 | None:intergenic |
| AAGGAGTTGAATGGAAGAGA+AGG | 0.497972 | 6_4:-2531967 | None:intergenic |
| CAAAGTGATTTACTTGCTCA+AGG | 0.500873 | 6_4:+2536960 | Msa0970890:CDS |
| AATACCAGCTTAAGCTTCCC+TGG | 0.502028 | 6_4:-2536153 | None:intergenic |
| GGGTCTCATGACTTCTGTGC+TGG | 0.504679 | 6_4:+2537816 | Msa0970890:CDS |
| ATCTTGCCCTTCTGATTCAT+GGG | 0.504827 | 6_4:+2538484 | Msa0970890:CDS |
| CTTGATGTTCATAATTTCAA+AGG | 0.505521 | 6_4:+2536322 | Msa0970890:CDS |
| GCTGAGAAAGTTAAATTGGA+AGG | 0.507090 | 6_4:+2533704 | Msa0970890:intron |
| TTATGAACATCAAGCTCCAC+TGG | 0.507274 | 6_4:-2536313 | None:intergenic |
| GTTCATAATTTCAAAGGCCC+TGG | 0.508228 | 6_4:+2536328 | Msa0970890:CDS |
| ATTTGCATGGACACGAGGAC+TGG | 0.508607 | 6_4:+2538065 | Msa0970890:CDS |
| AATCACAGCCAACGTATATC+GGG | 0.509033 | 6_4:+2539285 | Msa0970890:three_prime_UTR |
| TGTGTTGAGACAGTGGAGTC+AGG | 0.516129 | 6_4:+2538447 | Msa0970890:CDS |
| GTTATGTACCAGAGCCAAGC+TGG | 0.519400 | 6_4:+2538377 | Msa0970890:intron |
| AGGAAGAGTGATGATGAAGA+AGG | 0.524604 | 6_4:-2531986 | None:intergenic |
| ATTGGATTAGCGACATGAAT+GGG | 0.525305 | 6_4:-2532103 | None:intergenic |
| GCCACTGATACAGTAATCAA+TGG | 0.528157 | 6_4:+2536129 | Msa0970890:CDS |
| TGCTGAATCATCCATGTCAC+TGG | 0.529646 | 6_4:+2536500 | Msa0970890:CDS |
| TTAGAAGCCGAGGCAGCTCA+TGG | 0.530661 | 6_4:+2537973 | Msa0970890:CDS |
| CACAATTCTCAAGAATATGA+TGG | 0.533346 | 6_4:+2536563 | Msa0970890:CDS |
| GTTAGACTGTTGCAGGCTCT+CGG | 0.534715 | 6_4:-2539090 | None:intergenic |
| GGATTTGTGCAGGGTGTCCA+GGG | 0.537770 | 6_4:+2539008 | Msa0970890:intron |
| TCAGTCCAAATTCTTTGACT+CGG | 0.540110 | 6_4:-2534875 | None:intergenic |
| ACATTACCAGAAATAATTCT+GGG | 0.543809 | 6_4:-2535964 | None:intergenic |
| TGCTATGTATAATGTTGATG+AGG | 0.548975 | 6_4:+2536360 | Msa0970890:CDS |
| TGGACCAGGGAAGCTTAAGC+TGG | 0.551492 | 6_4:+2536149 | Msa0970890:CDS |
| ACACTAAGAATGGGGAAGCA+GGG | 0.554817 | 6_4:-2539234 | None:intergenic |
| AGAAACCAATTTGTATTGGT+AGG | 0.556282 | 6_4:+2536082 | Msa0970890:CDS |
| AGAAGACGGCGACGCTCCAG+TGG | 0.558871 | 6_4:+2536297 | Msa0970890:CDS |
| CAGCTCATGGAACTGTAACT+CGG | 0.560450 | 6_4:+2537986 | Msa0970890:CDS |
| AGATAGCATTGTGAGAGTGC+TGG | 0.561723 | 6_4:-2531918 | None:intergenic |
| GTATTGCTTCAATATTTGCA+TGG | 0.563391 | 6_4:+2538052 | Msa0970890:CDS |
| GTAGAAGTTTATCCAAACAT+AGG | 0.564558 | 6_4:+2539315 | Msa0970890:three_prime_UTR |
| ACAAATACAAATTGCACATG+AGG | 0.565470 | 6_4:+2539411 | Msa0970890:three_prime_UTR |
| ACCGAGGAATTTCGATGCTG+TGG | 0.568668 | 6_4:+2539045 | Msa0970890:CDS |
| GCCACAGCATCGAAATTCCT+CGG | 0.571447 | 6_4:-2539046 | None:intergenic |
| TGGGCTTGCAAGAATTATGA+TGG | 0.572955 | 6_4:+2536930 | Msa0970890:CDS |
| ATTCTCAAGAATATGATGGC+AGG | 0.573396 | 6_4:+2536567 | Msa0970890:CDS |
| GGTGTTCAAGTAATATTCCC+TGG | 0.574655 | 6_4:-2539025 | None:intergenic |
| AGATCGGTGCATGATGAGGA+AGG | 0.576583 | 6_4:-2532006 | None:intergenic |
| GGCAAACACTACTGCAGTAG+AGG | 0.577543 | 6_4:+2539336 | Msa0970890:three_prime_UTR |
| AGAGAGATCGGTGCATGATG+AGG | 0.578673 | 6_4:-2532010 | None:intergenic |
| AAATCAAAATCAATACTGCA+TGG | 0.578689 | 6_4:-2539547 | None:intergenic |
| AGAAGAAGCGAAGCATCGAA+GGG | 0.579584 | 6_4:-2532071 | None:intergenic |
| CACTAAGAATGGGGAAGCAG+GGG | 0.579590 | 6_4:-2539233 | None:intergenic |
| TTAGGAAAGCATTGAACAGA+GGG | 0.580551 | 6_4:+2539166 | Msa0970890:three_prime_UTR |
| AAGTGAAGGTGGGTATGTCT+GGG | 0.583822 | 6_4:+2536911 | Msa0970890:CDS |
| GAAAATCACTCACTTGAGAG+TGG | 0.584262 | 6_4:-2533596 | None:intergenic |
| GGCTTCTAATGTCTTGCCGT+CGG | 0.585294 | 6_4:-2537959 | None:intergenic |
| AATCCAATCGTCGAAATGGA+CGG | 0.587752 | 6_4:+2532118 | Msa0970890:CDS |
| ACTTAGGCCCATGAATCAGA+AGG | 0.587974 | 6_4:-2538491 | None:intergenic |
| GATTATATGGAAGATGATCA+AGG | 0.590189 | 6_4:+2532247 | Msa0970890:CDS |
| TATGCACTCAAAAGTGAAGG+TGG | 0.592170 | 6_4:+2536900 | Msa0970890:CDS |
| AGGAGGTTTATGAAGAAAGG+TGG | 0.594881 | 6_4:+2536725 | Msa0970890:CDS |
| GTAACTTCAGGTACGAGCAT+AGG | 0.596445 | 6_4:+2536856 | Msa0970890:intron |
| ATGATGAAGAAGGAGTTGAA+TGG | 0.597283 | 6_4:-2531976 | None:intergenic |
| TCAATATTTGCATGGACACG+AGG | 0.602243 | 6_4:+2538060 | Msa0970890:CDS |
| TCCATTGATTACTGTATCAG+TGG | 0.602369 | 6_4:-2536130 | None:intergenic |
| GATACAGTAATCAATGGACC+AGG | 0.603039 | 6_4:+2536135 | Msa0970890:CDS |
| TCTAATTCAGTCCCAGAAGA+CGG | 0.605583 | 6_4:+2536283 | Msa0970890:intron |
| AAATAATTCTGGGTATATTG+CGG | 0.612272 | 6_4:-2535954 | None:intergenic |
| GGCTGCATGTGTTGAGACAG+TGG | 0.612372 | 6_4:+2538440 | Msa0970890:CDS |
| ATTTAAAGACATATTTCAGG+AGG | 0.612668 | 6_4:+2536708 | Msa0970890:CDS |
| TGTTCCTTATTGTTCCATTG+GGG | 0.614208 | 6_4:-2534914 | None:intergenic |
| CGGCAAGACATTAGAAGCCG+AGG | 0.619121 | 6_4:+2537963 | Msa0970890:CDS |
| TCTATGTGGAGAAGCCCCAA+TGG | 0.620576 | 6_4:+2534900 | Msa0970890:CDS |
| AGGTTTATGAAGAAAGGTGG+CGG | 0.620816 | 6_4:+2536728 | Msa0970890:CDS |
| GCATAGGCTAATTGATGACA+TGG | 0.623095 | 6_4:+2536872 | Msa0970890:CDS |
| AATTTGCAGTTATCTTCCGA+CGG | 0.625126 | 6_4:+2537943 | Msa0970890:intron |
| CAAATACAAATTGCACATGA+GGG | 0.625407 | 6_4:+2539412 | Msa0970890:three_prime_UTR |
| AATTTGGACTGAAGTCTATG+TGG | 0.627890 | 6_4:+2534886 | Msa0970890:CDS |
| TTATTGAAGGAAAGAGAGAT+CGG | 0.630912 | 6_4:-2532022 | None:intergenic |
| GCATATGCACTCAAAAGTGA+AGG | 0.633024 | 6_4:+2536897 | Msa0970890:CDS |
| TACATAGCAAGAGCTACACC+AGG | 0.633459 | 6_4:-2536346 | None:intergenic |
| TCATCAAAGAGAGAATAAGA+AGG | 0.634745 | 6_4:+2531849 | Msa0970890:five_prime_UTR |
| ATGCACTCAAAAGTGAAGGT+GGG | 0.642981 | 6_4:+2536901 | Msa0970890:CDS |
| TCTTAGGTGATGAAATGACA+AGG | 0.649796 | 6_4:+2532225 | Msa0970890:intron |
| CTTAGGCCCATGAATCAGAA+GGG | 0.667929 | 6_4:-2538490 | None:intergenic |
| AAGAAGCGAAGCATCGAAGG+GGG | 0.669849 | 6_4:-2532069 | None:intergenic |
| GAAGAAGCGAAGCATCGAAG+GGG | 0.679156 | 6_4:-2532070 | None:intergenic |
| GTTAGGAAAGCATTGAACAG+AGG | 0.703075 | 6_4:+2539165 | Msa0970890:three_prime_UTR |
| TAGGCTAATTGATGACATGG+TGG | 0.713030 | 6_4:+2536875 | Msa0970890:CDS |
| ATACAGTAATCAATGGACCA+GGG | 0.726635 | 6_4:+2536136 | Msa0970890:CDS |
| ACATAGCAAGAGCTACACCA+GGG | 0.758638 | 6_4:-2536345 | None:intergenic |
| GGAATATTACTTGAACACCG+AGG | 0.776591 | 6_4:+2539029 | Msa0970890:CDS |
| TAGGAAAGCATTGAACAGAG+GGG | 0.791379 | 6_4:+2539167 | Msa0970890:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTAAATATATTAAATTATT+TGG | + | chr6_4:2532719-2532738 | Msa0970890:intron | 0.0% |
| !! | AACAACAAATATAATAAATA+AGG | - | chr6_4:2532200-2532219 | None:intergenic | 10.0% |
| !!! | ATTTTTTTATCAAATTATTG+TGG | + | chr6_4:2532309-2532328 | Msa0970890:intron | 10.0% |
| !! | AAAGATAAAATAAAGTTAAA+TGG | + | chr6_4:2532997-2533016 | Msa0970890:intron | 10.0% |
| !!! | TGGTTAGTTTTAAATTTTAA+TGG | + | chr6_4:2534021-2534040 | Msa0970890:intron | 15.0% |
| !! | AGAAGTTTCAATTAATAAAT+GGG | - | chr6_4:2534413-2534432 | None:intergenic | 15.0% |
| !! | TAGAAGTTTCAATTAATAAA+TGG | - | chr6_4:2534414-2534433 | None:intergenic | 15.0% |
| !! | GTTAAAAAAATCTATTTGAA+TGG | + | chr6_4:2535560-2535579 | Msa0970890:intron | 15.0% |
| !!! | ATGTTCAAATTAATTTTGAA+TGG | - | chr6_4:2535676-2535695 | None:intergenic | 15.0% |
| !!! | ATTCAAAATTAATTTGAACA+TGG | + | chr6_4:2535675-2535694 | Msa0970890:intron | 15.0% |
| !!! | TGTTTAAAATGAAAAATTGA+CGG | - | chr6_4:2536231-2536250 | None:intergenic | 15.0% |
| !!! | ATTTAACTTAAGCAATTTTT+TGG | + | chr6_4:2537324-2537343 | Msa0970890:intron | 15.0% |
| !!! | TAGAGAAGTTTTTAAAAAAA+AGG | - | chr6_4:2538310-2538329 | None:intergenic | 15.0% |
| !! | AATATTGAAATGATTAAACA+TGG | - | chr6_4:2538536-2538555 | None:intergenic | 15.0% |
| !! | ACTGATAGTTATATATATAT+TGG | - | chr6_4:2538885-2538904 | None:intergenic | 15.0% |
| !!! | ATTTTGTGAAAAAAAAAAAC+TGG | + | chr6_4:2539498-2539517 | Msa0970890:three_prime_UTR | 15.0% |
| !!! | TATTTGTTGTTTTGTTTCTT+AGG | + | chr6_4:2532209-2532228 | Msa0970890:intron | 20.0% |
| !!! | AACATAAAGTATTTTGATCT+GGG | + | chr6_4:2533520-2533539 | Msa0970890:CDS | 20.0% |
| !! | AGTATATATTATAGAGTTTC+TGG | + | chr6_4:2533770-2533789 | Msa0970890:intron | 20.0% |
| !!! | ACAATAAGGAACATTTTAAA+TGG | + | chr6_4:2534924-2534943 | Msa0970890:CDS | 20.0% |
| !! | ATGATAGAATACAAGAAAAT+AGG | + | chr6_4:2535237-2535256 | Msa0970890:intron | 20.0% |
| !!! | TATCAGTTTATTTAAAGTGA+GGG | - | chr6_4:2535430-2535449 | None:intergenic | 20.0% |
| !!! | ATATCAGTTTATTTAAAGTG+AGG | - | chr6_4:2535431-2535450 | None:intergenic | 20.0% |
| !! | CACTTTAAATAAACTGATAT+TGG | + | chr6_4:2535431-2535450 | Msa0970890:intron | 20.0% |
| !!! | TGACTTGCTATAAATATTAT+CGG | + | chr6_4:2535457-2535476 | Msa0970890:intron | 20.0% |
| !! | TATCTGAAAATTACAGAATA+TGG | + | chr6_4:2535621-2535640 | Msa0970890:intron | 20.0% |
| !! | ATCTGAAAATTACAGAATAT+GGG | + | chr6_4:2535622-2535641 | Msa0970890:intron | 20.0% |
| !! | TCTTGATTCTTAATTCTTAT+TGG | + | chr6_4:2536004-2536023 | Msa0970890:intron | 20.0% |
| !!! | TTTAAAATGAAAAATTGACG+GGG | - | chr6_4:2536229-2536248 | None:intergenic | 20.0% |
| !!! | GTTTAAAATGAAAAATTGAC+GGG | - | chr6_4:2536230-2536249 | None:intergenic | 20.0% |
| !!! | TAAGCAATTTTTTGGTAATA+TGG | + | chr6_4:2537332-2537351 | Msa0970890:intron | 20.0% |
| !!! | AAGCAATTTTTTGGTAATAT+GGG | + | chr6_4:2537333-2537352 | Msa0970890:intron | 20.0% |
| !!! | TCATCTCTATTTTTTGTTAT+TGG | + | chr6_4:2537894-2537913 | Msa0970890:intron | 20.0% |
| !!! | CATCTCTATTTTTTGTTATT+GGG | + | chr6_4:2537895-2537914 | Msa0970890:intron | 20.0% |
| !! | TTGATGTAGATGAATATAAT+TGG | + | chr6_4:2538200-2538219 | Msa0970890:intron | 20.0% |
| !! | GGATAAAAATGAAAAATTAC+TGG | + | chr6_4:2538398-2538417 | Msa0970890:CDS | 20.0% |
| !!! | TGATGTTTTATTAGAATTTC+TGG | - | chr6_4:2538711-2538730 | None:intergenic | 20.0% |
| !! | AATCAAACAATAAGCAAAAA+AGG | - | chr6_4:2538757-2538776 | None:intergenic | 20.0% |
| !! | TAAATTGTCCAATTATTCTT+TGG | + | chr6_4:2539198-2539217 | Msa0970890:three_prime_UTR | 20.0% |
| !! | AAATTGTCCAATTATTCTTT+GGG | + | chr6_4:2539199-2539218 | Msa0970890:three_prime_UTR | 20.0% |
| !! | CAAAATACTTGAAAAAAAAC+AGG | - | chr6_4:2539484-2539503 | None:intergenic | 20.0% |
| ! | ATGAAATGACAAGGATTATA+TGG | + | chr6_4:2532234-2532253 | Msa0970890:CDS | 25.0% |
| !!! | TTTTTCAATTAAGATTGCAG+CGG | + | chr6_4:2532431-2532450 | Msa0970890:intron | 25.0% |
| ! | ATGATTATAAAAGACACGTT+TGG | - | chr6_4:2532555-2532574 | None:intergenic | 25.0% |
| ! | ACTTACATTTAGTGTCTATT+TGG | - | chr6_4:2532622-2532641 | None:intergenic | 25.0% |
| !!! | TAAGTGTTACTTCATATTGA+AGG | - | chr6_4:2532683-2532702 | None:intergenic | 25.0% |
| !! | TCATTTTCGCAAATCATTAT+AGG | - | chr6_4:2533096-2533115 | None:intergenic | 25.0% |
| !! | ATTGTTTTCATAAGCTATCT+TGG | + | chr6_4:2533280-2533299 | Msa0970890:intron | 25.0% |
| !!! | AACATATCACAAGTTGTTTT+CGG | + | chr6_4:2533337-2533356 | Msa0970890:intron | 25.0% |
| ! | TCAAAAAAGCCAATCTAAAT+AGG | + | chr6_4:2533405-2533424 | Msa0970890:intron | 25.0% |
| ! | TTTATGTTCAAATCCAAGTA+AGG | - | chr6_4:2533508-2533527 | None:intergenic | 25.0% |
| !!! | GAACATAAAGTATTTTGATC+TGG | + | chr6_4:2533519-2533538 | Msa0970890:CDS | 25.0% |
| !!! | ACATAAAGTATTTTGATCTG+GGG | + | chr6_4:2533521-2533540 | Msa0970890:CDS | 25.0% |
| !! | TATTATAGAGTTTCTGGATA+CGG | + | chr6_4:2533776-2533795 | Msa0970890:intron | 25.0% |
| !! | ACCTTATTAGATTTTCTTCA+GGG | + | chr6_4:2533896-2533915 | Msa0970890:intron | 25.0% |
| ! | ATTTATGTCACATATCTTTC+TGG | + | chr6_4:2533921-2533940 | Msa0970890:intron | 25.0% |
| !! | TTTTACCATTTACGAAAAGA+GGG | + | chr6_4:2534055-2534074 | Msa0970890:intron | 25.0% |
| ! | AAATGCATTATGTGAAAACA+AGG | - | chr6_4:2534301-2534320 | None:intergenic | 25.0% |
| !!! | CATTTTTTCTCTTTTTACCT+TGG | + | chr6_4:2534316-2534335 | Msa0970890:intron | 25.0% |
| ! | TGTTTATAAAAACAGAACGA+GGG | - | chr6_4:2534375-2534394 | None:intergenic | 25.0% |
| ! | TTGTTTATAAAAACAGAACG+AGG | - | chr6_4:2534376-2534395 | None:intergenic | 25.0% |
| ! | AAATTAGTGTTGTCAAATAG+TGG | + | chr6_4:2534501-2534520 | Msa0970890:intron | 25.0% |
| ! | AAATTTGTGAGTATGTTACA+AGG | - | chr6_4:2534729-2534748 | None:intergenic | 25.0% |
| ! | ATTGATGTACATATATACAG+TGG | + | chr6_4:2535055-2535074 | Msa0970890:intron | 25.0% |
| ! | TTGTATTCTATCATTACACT+CGG | - | chr6_4:2535231-2535250 | None:intergenic | 25.0% |
| ! | CTTTAATGAAACTAACTAAG+TGG | - | chr6_4:2535299-2535318 | None:intergenic | 25.0% |
| ! | AGTTTCATTAAAGTTGTTTG+AGG | + | chr6_4:2535306-2535325 | Msa0970890:intron | 25.0% |
| ! | CAAATATAAAAAACACCAAC+AGG | - | chr6_4:2535358-2535377 | None:intergenic | 25.0% |
| !! | AATTAATTTGAACATGGATG+AGG | + | chr6_4:2535681-2535700 | Msa0970890:intron | 25.0% |
| !! | ATTAATTTGAACATGGATGA+GGG | + | chr6_4:2535682-2535701 | Msa0970890:intron | 25.0% |
| ! | AAGCAGTGAAAATTAATTTC+CGG | - | chr6_4:2535732-2535751 | None:intergenic | 25.0% |
| ! | AAACAAAGCTCAATTAATTC+AGG | - | chr6_4:2535829-2535848 | None:intergenic | 25.0% |
| ! | AAGCATTTCTAAATTTCTCT+TGG | + | chr6_4:2535880-2535899 | Msa0970890:intron | 25.0% |
| !!! | GGTATTTTTTATTTCTTTCC+AGG | + | chr6_4:2535904-2535923 | Msa0970890:intron | 25.0% |
| ! | AAATAATTCTGGGTATATTG+CGG | - | chr6_4:2535957-2535976 | None:intergenic | 25.0% |
| ! | AATATACCCAGAATTATTTC+TGG | + | chr6_4:2535958-2535977 | Msa0970890:CDS | 25.0% |
| ! | ACATTACCAGAAATAATTCT+GGG | - | chr6_4:2535967-2535986 | None:intergenic | 25.0% |
| ! | ACTAGAAAATTAGTTCCAAA+TGG | - | chr6_4:2536050-2536069 | None:intergenic | 25.0% |
| !!! | GAACTAATTTTCTAGTTTAC+AGG | + | chr6_4:2536054-2536073 | Msa0970890:intron | 25.0% |
| !!! | TAATTTTCTAGTTTACAGGA+TGG | + | chr6_4:2536058-2536077 | Msa0970890:intron | 25.0% |
| ! | CTTGATGTTCATAATTTCAA+AGG | + | chr6_4:2536322-2536341 | Msa0970890:CDS | 25.0% |
| !! | ATTCTTGAGAATTGTGTTTT+TGG | - | chr6_4:2536559-2536578 | None:intergenic | 25.0% |
| ! | CAGATTTAAAGACATATTTC+AGG | + | chr6_4:2536705-2536724 | Msa0970890:intron | 25.0% |
| ! | ATTTAAAGACATATTTCAGG+AGG | + | chr6_4:2536708-2536727 | Msa0970890:CDS | 25.0% |
| ! | TTACCAGTCATAAAAAACAA+TGG | - | chr6_4:2537055-2537074 | None:intergenic | 25.0% |
| !!! | ATTTTTTCCAATACAGAGAA+AGG | + | chr6_4:2537112-2537131 | Msa0970890:intron | 25.0% |
| ! | TACATCATGATAACTGAAAT+TGG | + | chr6_4:2537175-2537194 | Msa0970890:intron | 25.0% |
| ! | TGATAACTGAAATTGGTTAT+TGG | + | chr6_4:2537182-2537201 | Msa0970890:intron | 25.0% |
| ! | GATAACTGAAATTGGTTATT+GGG | + | chr6_4:2537183-2537202 | Msa0970890:intron | 25.0% |
| ! | CAAAGAAAATAATGATGGTA+TGG | - | chr6_4:2537265-2537284 | None:intergenic | 25.0% |
| ! | CCAAACAAAGAAAATAATGA+TGG | - | chr6_4:2537270-2537289 | None:intergenic | 25.0% |
| !! | CCATCATTATTTTCTTTGTT+TGG | + | chr6_4:2537267-2537286 | Msa0970890:intron | 25.0% |
| ! | CTGTTAGAAAAATATTTGTG+AGG | + | chr6_4:2537391-2537410 | Msa0970890:intron | 25.0% |
| !! | TGTCACTTGTTTGTAAAATA+TGG | - | chr6_4:2537448-2537467 | None:intergenic | 25.0% |
| ! | ATATGTTTGTGCATAAAGAA+AGG | + | chr6_4:2537499-2537518 | Msa0970890:intron | 25.0% |
| ! | ATAATATCCTCAATTGACAA+AGG | - | chr6_4:2538159-2538178 | None:intergenic | 25.0% |
| ! | AATAACAGATTCAGAAAACA+GGG | - | chr6_4:2538346-2538365 | None:intergenic | 25.0% |
| !!! | TTTTTCATTTTTATCCAGCT+TGG | - | chr6_4:2538394-2538413 | None:intergenic | 25.0% |
| !! | ACTGGATTTTTCTAATAAGT+TGG | + | chr6_4:2538416-2538435 | Msa0970890:CDS | 25.0% |
| ! | TTGAAATGATTAAACATGGT+GGG | - | chr6_4:2538532-2538551 | None:intergenic | 25.0% |
| ! | ATTGAAATGATTAAACATGG+TGG | - | chr6_4:2538533-2538552 | None:intergenic | 25.0% |
| !! | AATTTCTGGACAAAAATGAA+CGG | - | chr6_4:2538697-2538716 | None:intergenic | 25.0% |
| !!! | ATGTCTAATTGTTTTGACAT+TGG | + | chr6_4:2538987-2539006 | Msa0970890:intron | 25.0% |
| ! | AAATCAAAATCAATACTGCA+TGG | - | chr6_4:2539550-2539569 | None:intergenic | 25.0% |
| TCATCAAAGAGAGAATAAGA+AGG | + | chr6_4:2531849-2531868 | Msa0970890:five_prime_UTR | 30.0% | |
| TTATTGAAGGAAAGAGAGAT+CGG | - | chr6_4:2532025-2532044 | None:intergenic | 30.0% | |
| ATTGCGATTGTGATTATTGA+AGG | - | chr6_4:2532038-2532057 | None:intergenic | 30.0% | |
| GATTATATGGAAGATGATCA+AGG | + | chr6_4:2532247-2532266 | Msa0970890:CDS | 30.0% | |
| ! | TTGTGGTTTTCTATATGCTA+AGG | + | chr6_4:2532326-2532345 | Msa0970890:intron | 30.0% |
| AGTGATAAACTATAAGCTCA+TGG | + | chr6_4:2532473-2532492 | Msa0970890:intron | 30.0% | |
| ATAAACATGCCTTCAATTCA+AGG | + | chr6_4:2532871-2532890 | Msa0970890:intron | 30.0% | |
| ATAAGCTGTTTATCAAGACA+GGG | - | chr6_4:2532922-2532941 | None:intergenic | 30.0% | |
| TATAAGCTGTTTATCAAGAC+AGG | - | chr6_4:2532923-2532942 | None:intergenic | 30.0% | |
| !! | GCTATAAGTTGTTTTCCATA+AGG | + | chr6_4:2533031-2533050 | Msa0970890:intron | 30.0% |
| TAGTTCTCGAATATACCTTA+TGG | - | chr6_4:2533049-2533068 | None:intergenic | 30.0% | |
| !! | ATAAACACTTTGAGACTGTT+TGG | - | chr6_4:2533371-2533390 | None:intergenic | 30.0% |
| !!! | GCTTTTTTGAGCTTATCTAT+AGG | - | chr6_4:2533395-2533414 | None:intergenic | 30.0% |
| !!! | CATAAAGTATTTTGATCTGG+GGG | + | chr6_4:2533522-2533541 | Msa0970890:CDS | 30.0% |
| ! | AGTGAGTGATTTTCAATGAA+TGG | + | chr6_4:2533605-2533624 | Msa0970890:intron | 30.0% |
| ACATGCATAAGATAACACAT+TGG | + | chr6_4:2533638-2533657 | Msa0970890:intron | 30.0% | |
| CTTTGCTGAGAAAGTTAAAT+TGG | + | chr6_4:2533700-2533719 | Msa0970890:intron | 30.0% | |
| ! | TTAAATTGGAAGGTGCAATT+AGG | + | chr6_4:2533714-2533733 | Msa0970890:CDS | 30.0% |
| CTTTCATGAAACTAACTAAG+TGG | - | chr6_4:2533825-2533844 | None:intergenic | 30.0% | |
| ACACAAACTAATTGCTTACT+GGG | + | chr6_4:2533854-2533873 | Msa0970890:intron | 30.0% | |
| ! | CACCTTATTAGATTTTCTTC+AGG | + | chr6_4:2533895-2533914 | Msa0970890:intron | 30.0% |
| ACCCTGAAGAAAATCTAATA+AGG | - | chr6_4:2533900-2533919 | None:intergenic | 30.0% | |
| ! | TTCAGTTTGTTTAGACCTTT+AGG | + | chr6_4:2533949-2533968 | Msa0970890:intron | 30.0% |
| ! | TCAGTTTGTTTAGACCTTTA+GGG | + | chr6_4:2533950-2533969 | Msa0970890:intron | 30.0% |
| ! | CTTTTACCATTTACGAAAAG+AGG | + | chr6_4:2534054-2534073 | Msa0970890:intron | 30.0% |
| TTTACCATTTACGAAAAGAG+GGG | + | chr6_4:2534056-2534075 | Msa0970890:intron | 30.0% | |
| !!! | AACACTGCCACATTTTTTTT+AGG | - | chr6_4:2534083-2534102 | None:intergenic | 30.0% |
| TCCCTGCTTGTAATTTAATT+TGG | + | chr6_4:2534164-2534183 | Msa0970890:intron | 30.0% | |
| GCCAAATTAAATTACAAGCA+GGG | - | chr6_4:2534168-2534187 | None:intergenic | 30.0% | |
| TGCCAAATTAAATTACAAGC+AGG | - | chr6_4:2534169-2534188 | None:intergenic | 30.0% | |
| ! | TAGAGCATCAAATACTTAAG+AGG | - | chr6_4:2534209-2534228 | None:intergenic | 30.0% |
| TCTACCAATGTTTGTTTCAT+GGG | + | chr6_4:2534225-2534244 | Msa0970890:intron | 30.0% | |
| AAATCCCATGAAACAAACAT+TGG | - | chr6_4:2534232-2534251 | None:intergenic | 30.0% | |
| TTTGTCTTACATGCTTGTAT+TGG | + | chr6_4:2534249-2534268 | Msa0970890:intron | 30.0% | |
| TTGTCTTACATGCTTGTATT+GGG | + | chr6_4:2534250-2534269 | Msa0970890:intron | 30.0% | |
| GTGAAAACAAGGTAAAATTG+CGG | - | chr6_4:2534290-2534309 | None:intergenic | 30.0% | |
| TTGAAACTTCTATTTGCTTC+AGG | + | chr6_4:2534422-2534441 | Msa0970890:intron | 30.0% | |
| AAAACATTCTACATAGTGCA+TGG | + | chr6_4:2534761-2534780 | Msa0970890:intron | 30.0% | |
| CAAATTAAGATCATGAGCTA+GGG | - | chr6_4:2534795-2534814 | None:intergenic | 30.0% | |
| ACAAATTAAGATCATGAGCT+AGG | - | chr6_4:2534796-2534815 | None:intergenic | 30.0% | |
| ATGTTCCTTATTGTTCCATT+GGG | - | chr6_4:2534918-2534937 | None:intergenic | 30.0% | |
| AATGTTCCTTATTGTTCCAT+TGG | - | chr6_4:2534919-2534938 | None:intergenic | 30.0% | |
| ! | AAGAGATATTAGTCTGCATA+TGG | + | chr6_4:2535078-2535097 | Msa0970890:intron | 30.0% |
| !!! | CGTTTTGTTTATTTTTCTCG+CGG | + | chr6_4:2535120-2535139 | Msa0970890:intron | 30.0% |
| !!! | GTTTTGTTTATTTTTCTCGC+GGG | + | chr6_4:2535121-2535140 | Msa0970890:intron | 30.0% |
| !! | CGGTAGTACGAATTTTATTT+CGG | - | chr6_4:2535211-2535230 | None:intergenic | 30.0% |
| ATAAGATAGATGACAGAAGA+TGG | + | chr6_4:2535591-2535610 | Msa0970890:intron | 30.0% | |
| AAAGTTGGCAATAAGTCAAA+TGG | - | chr6_4:2535648-2535667 | None:intergenic | 30.0% | |
| ! | TTAATTTGAACATGGATGAG+GGG | + | chr6_4:2535683-2535702 | Msa0970890:intron | 30.0% |
| CATTTCTAAATTTCTCTTGG+TGG | + | chr6_4:2535883-2535902 | Msa0970890:intron | 30.0% | |
| GACATTACCAGAAATAATTC+TGG | - | chr6_4:2535968-2535987 | None:intergenic | 30.0% | |
| !! | AAATACTGAAGAGTACCATT+TGG | + | chr6_4:2536032-2536051 | Msa0970890:intron | 30.0% |
| TGGAAGAAACCAATTTGTAT+TGG | + | chr6_4:2536078-2536097 | Msa0970890:CDS | 30.0% | |
| ! | AGAAACCAATTTGTATTGGT+AGG | + | chr6_4:2536082-2536101 | Msa0970890:CDS | 30.0% |
| TGCTATGTATAATGTTGATG+AGG | + | chr6_4:2536360-2536379 | Msa0970890:CDS | 30.0% | |
| !! | CAAGTGTTGAACATTTAGTT+AGG | - | chr6_4:2536415-2536434 | None:intergenic | 30.0% |
| CACAATTCTCAAGAATATGA+TGG | + | chr6_4:2536563-2536582 | Msa0970890:CDS | 30.0% | |
| AGTTTGAAGAACACTCAATA+TGG | + | chr6_4:2536755-2536774 | Msa0970890:CDS | 30.0% | |
| GCATTACATATACACATTGA+TGG | + | chr6_4:2536822-2536841 | Msa0970890:intron | 30.0% | |
| ! | GCATGATGATTGTATGATTT+TGG | + | chr6_4:2537013-2537032 | Msa0970890:intron | 30.0% |
| GTCATAAAAAACAATGGCTA+GGG | - | chr6_4:2537049-2537068 | None:intergenic | 30.0% | |
| AGTCATAAAAAACAATGGCT+AGG | - | chr6_4:2537050-2537069 | None:intergenic | 30.0% | |
| !!! | TAGCCATTGTTTTTTATGAC+TGG | + | chr6_4:2537049-2537068 | Msa0970890:intron | 30.0% |
| AAAAAATTGACCACTTTCCA+TGG | - | chr6_4:2537099-2537118 | None:intergenic | 30.0% | |
| TATAATGCCTTTCTCTGTAT+TGG | - | chr6_4:2537122-2537141 | None:intergenic | 30.0% | |
| TTATGCACAAACATATACCA+AGG | - | chr6_4:2537495-2537514 | None:intergenic | 30.0% | |
| !!! | CATTTGTCCTTGTTTTTGAT+TGG | + | chr6_4:2537593-2537612 | Msa0970890:intron | 30.0% |
| GTAACAACCAATCAAAAACA+AGG | - | chr6_4:2537603-2537622 | None:intergenic | 30.0% | |
| ! | CATTTTCGGTTTCATCAAAA+GGG | + | chr6_4:2538009-2538028 | Msa0970890:CDS | 30.0% |
| GTATTGCTTCAATATTTGCA+TGG | + | chr6_4:2538052-2538071 | Msa0970890:CDS | 30.0% | |
| ! | AACTTTTCCTTTGTCAATTG+AGG | + | chr6_4:2538149-2538168 | Msa0970890:intron | 30.0% |
| GAAGATCACTTCTTAATCTA+TGG | - | chr6_4:2538277-2538296 | None:intergenic | 30.0% | |
| CAATAACAGATTCAGAAAAC+AGG | - | chr6_4:2538347-2538366 | None:intergenic | 30.0% | |
| !! | GGATTTTTCTAATAAGTTGG+AGG | + | chr6_4:2538419-2538438 | Msa0970890:CDS | 30.0% |
| TGAAATGATTAAACATGGTG+GGG | - | chr6_4:2538531-2538550 | None:intergenic | 30.0% | |
| CATGATATGTCTGTTTATAG+TGG | + | chr6_4:2538812-2538831 | Msa0970890:intron | 30.0% | |
| ! | GTTTATAGTGGAAGTTAAAC+TGG | + | chr6_4:2538824-2538843 | Msa0970890:intron | 30.0% |
| AATGCTTTCCTAACATTCTA+GGG | - | chr6_4:2539159-2539178 | None:intergenic | 30.0% | |
| AAAAACAGACACTAAGAATG+GGG | - | chr6_4:2539245-2539264 | None:intergenic | 30.0% | |
| CAAAAACAGACACTAAGAAT+GGG | - | chr6_4:2539246-2539265 | None:intergenic | 30.0% | |
| ACAAAAACAGACACTAAGAA+TGG | - | chr6_4:2539247-2539266 | None:intergenic | 30.0% | |
| !!! | ATTCTTAGTGTCTGTTTTTG+TGG | + | chr6_4:2539246-2539265 | Msa0970890:three_prime_UTR | 30.0% |
| GTAGAAGTTTATCCAAACAT+AGG | + | chr6_4:2539315-2539334 | Msa0970890:three_prime_UTR | 30.0% | |
| ACAAATACAAATTGCACATG+AGG | + | chr6_4:2539411-2539430 | Msa0970890:three_prime_UTR | 30.0% | |
| CAAATACAAATTGCACATGA+GGG | + | chr6_4:2539412-2539431 | Msa0970890:three_prime_UTR | 30.0% | |
| GTGAAAAAAAAAAACTGGAG+TGG | + | chr6_4:2539503-2539522 | Msa0970890:three_prime_UTR | 30.0% | |
| ! | TTGATGATTTAGTGCATGTT+TGG | + | chr6_4:2539568-2539587 | Msa0970890:three_prime_UTR | 30.0% |
| AATGGAAGAGAAGGTTGTTA+GGG | - | chr6_4:2531961-2531980 | None:intergenic | 35.0% | |
| ATGATGAAGAAGGAGTTGAA+TGG | - | chr6_4:2531979-2531998 | None:intergenic | 35.0% | |
| !! | ATTGGATTAGCGACATGAAT+GGG | - | chr6_4:2532106-2532125 | None:intergenic | 35.0% |
| TCTTAGGTGATGAAATGACA+AGG | + | chr6_4:2532225-2532244 | Msa0970890:intron | 35.0% | |
| ATGGAAGATGATCAAGGATA+AGG | + | chr6_4:2532253-2532272 | Msa0970890:CDS | 35.0% | |
| GACACTCATAAGAAAACGAA+AGG | + | chr6_4:2532370-2532389 | Msa0970890:intron | 35.0% | |
| GCTCTGTTTGGTAAAATTAG+TGG | + | chr6_4:2532392-2532411 | Msa0970890:intron | 35.0% | |
| GATTGCAGCGGTAAATAAAA+TGG | + | chr6_4:2532443-2532462 | Msa0970890:intron | 35.0% | |
| ! | ATTGAAGGCATGTTTATCGT+TGG | - | chr6_4:2532868-2532887 | None:intergenic | 35.0% |
| ACAATGACACCTTGAATTGA+AGG | - | chr6_4:2532883-2532902 | None:intergenic | 35.0% | |
| ! | GTTTTCATAAGCTATCTTGG+AGG | + | chr6_4:2533283-2533302 | Msa0970890:intron | 35.0% |
| GCAAATTGCAAATAGTCTAC+TGG | - | chr6_4:2533431-2533450 | None:intergenic | 35.0% | |
| AAGTAAGGAAAGATAAGCTG+CGG | - | chr6_4:2533493-2533512 | None:intergenic | 35.0% | |
| GCTGAGAAAGTTAAATTGGA+AGG | + | chr6_4:2533704-2533723 | Msa0970890:intron | 35.0% | |
| ACTAACTAAGTGGCATTACT+TGG | - | chr6_4:2533815-2533834 | None:intergenic | 35.0% | |
| GACACAAACTAATTGCTTAC+TGG | + | chr6_4:2533853-2533872 | Msa0970890:intron | 35.0% | |
| AATAAGGTGAAAACCCTAAC+AGG | - | chr6_4:2533884-2533903 | None:intergenic | 35.0% | |
| AACAGACATAAAGCTTGTCA+AGG | - | chr6_4:2533977-2533996 | None:intergenic | 35.0% | |
| ! | CTACTTAAGCTGCATTTTTG+TGG | + | chr6_4:2534001-2534020 | Msa0970890:intron | 35.0% |
| ACTACAACAAAATGTGCCAA+CGG | - | chr6_4:2534119-2534138 | None:intergenic | 35.0% | |
| CTCTACCAATGTTTGTTTCA+TGG | + | chr6_4:2534224-2534243 | Msa0970890:intron | 35.0% | |
| TCAGTCCAAATTCTTTGACT+CGG | - | chr6_4:2534878-2534897 | None:intergenic | 35.0% | |
| AATTTGGACTGAAGTCTATG+TGG | + | chr6_4:2534886-2534905 | Msa0970890:CDS | 35.0% | |
| TGTTCCTTATTGTTCCATTG+GGG | - | chr6_4:2534917-2534936 | None:intergenic | 35.0% | |
| TAAACAAAACGACACACACA+GGG | - | chr6_4:2535111-2535130 | None:intergenic | 35.0% | |
| ATAAACAAAACGACACACAC+AGG | - | chr6_4:2535112-2535131 | None:intergenic | 35.0% | |
| ! | ACTTGGCTATCAATTAGCTT+GGG | - | chr6_4:2535272-2535291 | None:intergenic | 35.0% |
| TACTTGGCTATCAATTAGCT+TGG | - | chr6_4:2535273-2535292 | None:intergenic | 35.0% | |
| ACTAACTAAGTGGCATTACT+TGG | - | chr6_4:2533815-2533834 | None:intergenic | 35.0% | |
| AATGTCAGTCAAGGGAAAAA+AGG | + | chr6_4:2535485-2535504 | Msa0970890:intron | 35.0% | |
| ATGTCAGTCAAGGGAAAAAA+GGG | + | chr6_4:2535486-2535505 | Msa0970890:intron | 35.0% | |
| AAATCCCAATTGAAGAGTCA+GGG | + | chr6_4:2535509-2535528 | Msa0970890:intron | 35.0% | |
| AAAACCCTGACTCTTCAATT+GGG | - | chr6_4:2535516-2535535 | None:intergenic | 35.0% | |
| TAAAACCCTGACTCTTCAAT+TGG | - | chr6_4:2535517-2535536 | None:intergenic | 35.0% | |
| GCGGGATATTGAATTTATTC+CGG | + | chr6_4:2535710-2535729 | Msa0970890:intron | 35.0% | |
| GTAGTATATTGAGATCGCAT+GGG | - | chr6_4:2535775-2535794 | None:intergenic | 35.0% | |
| GGTATATTGCGGCATATTAT+GGG | - | chr6_4:2535946-2535965 | None:intergenic | 35.0% | |
| ! | TCCATTGATTACTGTATCAG+TGG | - | chr6_4:2536133-2536152 | None:intergenic | 35.0% |
| ATACAGTAATCAATGGACCA+GGG | + | chr6_4:2536136-2536155 | Msa0970890:CDS | 35.0% | |
| TACATCAGAAAGCAGGTATT+CGG | - | chr6_4:2536193-2536212 | None:intergenic | 35.0% | |
| TTTCAACTACATCAGAAAGC+AGG | - | chr6_4:2536200-2536219 | None:intergenic | 35.0% | |
| ! | TTTTGTAAATGCCAGTGACA+TGG | - | chr6_4:2536514-2536533 | None:intergenic | 35.0% |
| CACTGGCATTTACAAAAAAG+TGG | + | chr6_4:2536517-2536536 | Msa0970890:CDS | 35.0% | |
| !!! | TTTTTGGTGCTCAAGTAAAG+TGG | - | chr6_4:2536543-2536562 | None:intergenic | 35.0% |
| ATTCTCAAGAATATGATGGC+AGG | + | chr6_4:2536567-2536586 | Msa0970890:CDS | 35.0% | |
| ! | AAGAGAAGTTTTGCATACGA+AGG | - | chr6_4:2536638-2536657 | None:intergenic | 35.0% |
| TTTAATTCAGACAGCGTTTC+AGG | + | chr6_4:2536656-2536675 | Msa0970890:intron | 35.0% | |
| TTCAGGAGGTTTATGAAGAA+AGG | + | chr6_4:2536722-2536741 | Msa0970890:CDS | 35.0% | |
| CAAAGTGATTTACTTGCTCA+AGG | + | chr6_4:2536960-2536979 | Msa0970890:CDS | 35.0% | |
| GTGTGCTCTGTTTATTATAG+AGG | + | chr6_4:2537220-2537239 | Msa0970890:intron | 35.0% | |
| ATATGGCACTTGAAACACTT+AGG | - | chr6_4:2537431-2537450 | None:intergenic | 35.0% | |
| ! | CTTTTGCATTACGTTTACCT+TGG | + | chr6_4:2537475-2537494 | Msa0970890:intron | 35.0% |
| ACACTTAACAGAAAGTTGCA+AGG | + | chr6_4:2537561-2537580 | Msa0970890:intron | 35.0% | |
| CCAGAAAAGACACATTGAAA+GGG | - | chr6_4:2537676-2537695 | None:intergenic | 35.0% | |
| ACCAGAAAAGACACATTGAA+AGG | - | chr6_4:2537677-2537696 | None:intergenic | 35.0% | |
| AATTTGCAGTTATCTTCCGA+CGG | + | chr6_4:2537943-2537962 | Msa0970890:intron | 35.0% | |
| ! | GCATTTTCGGTTTCATCAAA+AGG | + | chr6_4:2538008-2538027 | Msa0970890:CDS | 35.0% |
| CATCTACATCAACTTTGACA+AGG | - | chr6_4:2538192-2538211 | None:intergenic | 35.0% | |
| GGAAGGATATTCACTTACTT+AGG | - | chr6_4:2538510-2538529 | None:intergenic | 35.0% | |
| TTACTATTTCATGACGTGTC+TGG | + | chr6_4:2538653-2538672 | Msa0970890:intron | 35.0% | |
| CTTTAGCCTGTTATTAAGCT+CGG | + | chr6_4:2538908-2538927 | Msa0970890:intron | 35.0% | |
| TTTAGCCTGTTATTAAGCTC+GGG | + | chr6_4:2538909-2538928 | Msa0970890:intron | 35.0% | |
| ! | TTTTGACATTGGATTTGTGC+AGG | + | chr6_4:2538998-2539017 | Msa0970890:intron | 35.0% |
| TTTGACATTGGATTTGTGCA+GGG | + | chr6_4:2538999-2539018 | Msa0970890:intron | 35.0% | |
| CAATGCTTTCCTAACATTCT+AGG | - | chr6_4:2539160-2539179 | None:intergenic | 35.0% | |
| !! | TTAGGAAAGCATTGAACAGA+GGG | + | chr6_4:2539166-2539185 | Msa0970890:three_prime_UTR | 35.0% |
| CCAAAGTCCCAAAGAATAAT+TGG | - | chr6_4:2539209-2539228 | None:intergenic | 35.0% | |
| !! | CCAATTATTCTTTGGGACTT+TGG | + | chr6_4:2539206-2539225 | Msa0970890:three_prime_UTR | 35.0% |
| AAATCACAGCCAACGTATAT+CGG | + | chr6_4:2539284-2539303 | Msa0970890:three_prime_UTR | 35.0% | |
| GAATGGAAGAGAAGGTTGTT+AGG | - | chr6_4:2531962-2531981 | None:intergenic | 40.0% | |
| AAGGAGTTGAATGGAAGAGA+AGG | - | chr6_4:2531970-2531989 | None:intergenic | 40.0% | |
| ! | AGGAAGAGTGATGATGAAGA+AGG | - | chr6_4:2531989-2532008 | None:intergenic | 40.0% |
| !! | GATTGGATTAGCGACATGAA+TGG | - | chr6_4:2532107-2532126 | None:intergenic | 40.0% |
| AATCCAATCGTCGAAATGGA+CGG | + | chr6_4:2532118-2532137 | Msa0970890:CDS | 40.0% | |
| ! | GAATTACGAAGAGTGTGAGA+TGG | - | chr6_4:2532165-2532184 | None:intergenic | 40.0% |
| AGAAAACGAAAGGCTCTGTT+TGG | + | chr6_4:2532380-2532399 | Msa0970890:intron | 40.0% | |
| TCATTGTGTCAGTGCTACAT+AGG | + | chr6_4:2532896-2532915 | Msa0970890:intron | 40.0% | |
| ! | GTCTACTGGCCTATTTAGAT+TGG | - | chr6_4:2533417-2533436 | None:intergenic | 40.0% |
| GCAGCTTATCTTTCCTTACT+TGG | + | chr6_4:2533492-2533511 | Msa0970890:intron | 40.0% | |
| GAAAATCACTCACTTGAGAG+TGG | - | chr6_4:2533599-2533618 | None:intergenic | 40.0% | |
| GAGGGGACCTAAAAAAAATG+TGG | + | chr6_4:2534073-2534092 | Msa0970890:intron | 40.0% | |
| !! | GTTGGCACATTTTGTTGTAG+TGG | + | chr6_4:2534118-2534137 | Msa0970890:intron | 40.0% |
| AAATGTGCAACCATAACTCC+CGG | + | chr6_4:2534460-2534479 | Msa0970890:intron | 40.0% | |
| TAAAGCCCAGAACAACTTAC+CGG | - | chr6_4:2534482-2534501 | None:intergenic | 40.0% | |
| CAGTCCAAATTCTTTGACTC+GGG | - | chr6_4:2534877-2534896 | None:intergenic | 40.0% | |
| !!! | TTCCCACACGTGTTTTTTTG+TGG | + | chr6_4:2535028-2535047 | Msa0970890:intron | 40.0% |
| !!! | TCCCACACGTGTTTTTTTGT+GGG | + | chr6_4:2535029-2535048 | Msa0970890:intron | 40.0% |
| ACCCACAAAAAAACACGTGT+GGG | - | chr6_4:2535033-2535052 | None:intergenic | 40.0% | |
| ! | TTGGCTATCAATTAGCTTGG+GGG | - | chr6_4:2535270-2535289 | None:intergenic | 40.0% |
| ! | CTTGGCTATCAATTAGCTTG+GGG | - | chr6_4:2535271-2535290 | None:intergenic | 40.0% |
| GGCACAAACTAATTGCTTAC+CGG | + | chr6_4:2535327-2535346 | Msa0970890:intron | 40.0% | |
| GCACAAACTAATTGCTTACC+GGG | + | chr6_4:2535328-2535347 | Msa0970890:intron | 40.0% | |
| CACAAACTAATTGCTTACCG+GGG | + | chr6_4:2535329-2535348 | Msa0970890:intron | 40.0% | |
| ACAAACTAATTGCTTACCGG+GGG | + | chr6_4:2535330-2535349 | Msa0970890:intron | 40.0% | |
| TCGGTTTACAATGTCAGTCA+AGG | + | chr6_4:2535476-2535495 | Msa0970890:intron | 40.0% | |
| CGGTTTACAATGTCAGTCAA+GGG | + | chr6_4:2535477-2535496 | Msa0970890:intron | 40.0% | |
| GAAATCCCAATTGAAGAGTC+AGG | + | chr6_4:2535508-2535527 | Msa0970890:intron | 40.0% | |
| TGACTTATTGCCAACTTTGC+TGG | + | chr6_4:2535650-2535669 | Msa0970890:intron | 40.0% | |
| ! | TTTTGAATGGCCAGCAAAGT+TGG | - | chr6_4:2535663-2535682 | None:intergenic | 40.0% |
| CGTAGTATATTGAGATCGCA+TGG | - | chr6_4:2535776-2535795 | None:intergenic | 40.0% | |
| GGGTATATTGCGGCATATTA+TGG | - | chr6_4:2535947-2535966 | None:intergenic | 40.0% | |
| GCATGCCTACCAATACAAAT+TGG | - | chr6_4:2536090-2536109 | None:intergenic | 40.0% | |
| !! | TGTATTGGTAGGCATGCTTT+TGG | + | chr6_4:2536093-2536112 | Msa0970890:CDS | 40.0% |
| GCCACTGATACAGTAATCAA+TGG | + | chr6_4:2536129-2536148 | Msa0970890:CDS | 40.0% | |
| GATACAGTAATCAATGGACC+AGG | + | chr6_4:2536135-2536154 | Msa0970890:CDS | 40.0% | |
| TCTAATTCAGTCCCAGAAGA+CGG | + | chr6_4:2536283-2536302 | Msa0970890:intron | 40.0% | |
| TTATGAACATCAAGCTCCAC+TGG | - | chr6_4:2536316-2536335 | None:intergenic | 40.0% | |
| GTTCATAATTTCAAAGGCCC+TGG | + | chr6_4:2536328-2536347 | Msa0970890:CDS | 40.0% | |
| CTCGAATTGACTGGCATATT+AGG | - | chr6_4:2536476-2536495 | None:intergenic | 40.0% | |
| AGGAGGTTTATGAAGAAAGG+TGG | + | chr6_4:2536725-2536744 | Msa0970890:CDS | 40.0% | |
| AGGTTTATGAAGAAAGGTGG+CGG | + | chr6_4:2536728-2536747 | Msa0970890:CDS | 40.0% | |
| GTTGACACTTGAGTAACTTC+AGG | + | chr6_4:2536844-2536863 | Msa0970890:intron | 40.0% | |
| ! | GCATAGGCTAATTGATGACA+TGG | + | chr6_4:2536872-2536891 | Msa0970890:CDS | 40.0% |
| ! | TAGGCTAATTGATGACATGG+TGG | + | chr6_4:2536875-2536894 | Msa0970890:CDS | 40.0% |
| GCATATGCACTCAAAAGTGA+AGG | + | chr6_4:2536897-2536916 | Msa0970890:CDS | 40.0% | |
| TATGCACTCAAAAGTGAAGG+TGG | + | chr6_4:2536900-2536919 | Msa0970890:CDS | 40.0% | |
| ATGCACTCAAAAGTGAAGGT+GGG | + | chr6_4:2536901-2536920 | Msa0970890:CDS | 40.0% | |
| TGGGCTTGCAAGAATTATGA+TGG | + | chr6_4:2536930-2536949 | Msa0970890:CDS | 40.0% | |
| GACTGGTAAGATCCAATTCT+TGG | + | chr6_4:2537066-2537085 | Msa0970890:intron | 40.0% | |
| ATATCCTTGTCCAAGCGATT+TGG | + | chr6_4:2537139-2537158 | Msa0970890:intron | 40.0% | |
| ATAAACAGAGCACACTCATC+TGG | - | chr6_4:2537215-2537234 | None:intergenic | 40.0% | |
| TAACAGAAAGTTGCAAGGCA+AGG | + | chr6_4:2537566-2537585 | Msa0970890:intron | 40.0% | |
| AACAGAAAGTTGCAAGGCAA+GGG | + | chr6_4:2537567-2537586 | Msa0970890:intron | 40.0% | |
| ! | CCCTTTCAATGTGTCTTTTC+TGG | + | chr6_4:2537673-2537692 | Msa0970890:intron | 40.0% |
| !! | TCAATGTGTCTTTTCTGGTG+TGG | + | chr6_4:2537678-2537697 | Msa0970890:intron | 40.0% |
| ! | TCTGAAATCTGAATGTGTGC+AGG | + | chr6_4:2537781-2537800 | Msa0970890:intron | 40.0% |
| ATCTGAATGTGTGCAGGATT+CGG | + | chr6_4:2537787-2537806 | Msa0970890:intron | 40.0% | |
| ! | GAACTGTAACTCGGCATTTT+CGG | + | chr6_4:2537995-2538014 | Msa0970890:CDS | 40.0% |
| TGAAGCAATACTGTTCGTAC+TGG | - | chr6_4:2538043-2538062 | None:intergenic | 40.0% | |
| TCAATATTTGCATGGACACG+AGG | + | chr6_4:2538060-2538079 | Msa0970890:CDS | 40.0% | |
| GAAAACAGGGAGAAGAAGAA+AGG | - | chr6_4:2538333-2538352 | None:intergenic | 40.0% | |
| ! | ATTTTTATCCAGCTTGGCTC+TGG | - | chr6_4:2538388-2538407 | None:intergenic | 40.0% |
| AATCAGAAGGGCAAGATCTT+TGG | - | chr6_4:2538481-2538500 | None:intergenic | 40.0% | |
| ATCTTGCCCTTCTGATTCAT+GGG | + | chr6_4:2538484-2538503 | Msa0970890:CDS | 40.0% | |
| ! | ATGATTAAACATGGTGGGGA+AGG | - | chr6_4:2538527-2538546 | None:intergenic | 40.0% |
| CGAAGCAGGATACAAGAATT+AGG | - | chr6_4:2538610-2538629 | None:intergenic | 40.0% | |
| ACGAATAATTGCTTCGAAGC+AGG | - | chr6_4:2538624-2538643 | None:intergenic | 40.0% | |
| !! | GTGGAAGTTAAACTGGTTTG+TGG | + | chr6_4:2538831-2538850 | Msa0970890:intron | 40.0% |
| GGTGTTCAAGTAATATTCCC+TGG | - | chr6_4:2539028-2539047 | None:intergenic | 40.0% | |
| GGAATATTACTTGAACACCG+AGG | + | chr6_4:2539029-2539048 | Msa0970890:CDS | 40.0% | |
| CATACATGTTAGACTGTTGC+AGG | - | chr6_4:2539100-2539119 | None:intergenic | 40.0% | |
| CTGCAACAGTCTAACATGTA+TGG | + | chr6_4:2539098-2539117 | Msa0970890:three_prime_UTR | 40.0% | |
| AATCCTAGCCCTAGAATGTT+AGG | + | chr6_4:2539148-2539167 | Msa0970890:three_prime_UTR | 40.0% | |
| !! | TTTCCTAACATTCTAGGGCT+AGG | - | chr6_4:2539154-2539173 | None:intergenic | 40.0% |
| !! | GTTAGGAAAGCATTGAACAG+AGG | + | chr6_4:2539165-2539184 | Msa0970890:three_prime_UTR | 40.0% |
| !! | TAGGAAAGCATTGAACAGAG+GGG | + | chr6_4:2539167-2539186 | Msa0970890:three_prime_UTR | 40.0% |
| AATCACAGCCAACGTATATC+GGG | + | chr6_4:2539285-2539304 | Msa0970890:three_prime_UTR | 40.0% | |
| CAGTAGTGTTTGCCTATGTT+TGG | - | chr6_4:2539330-2539349 | None:intergenic | 40.0% | |
| ! | AGATAGCATTGTGAGAGTGC+TGG | - | chr6_4:2531921-2531940 | None:intergenic | 45.0% |
| !! | AGAAGAAGCGAAGCATCGAA+GGG | - | chr6_4:2532074-2532093 | None:intergenic | 45.0% |
| !! | AAGAAGAAGCGAAGCATCGA+AGG | - | chr6_4:2532075-2532094 | None:intergenic | 45.0% |
| CGCTAATCCAATCGTCGAAA+TGG | + | chr6_4:2532114-2532133 | Msa0970890:CDS | 45.0% | |
| TTACCGTCCATTTCGACGAT+TGG | - | chr6_4:2532124-2532143 | None:intergenic | 45.0% | |
| CTTACTGGGAGAACCTGTTA+GGG | + | chr6_4:2533868-2533887 | Msa0970890:intron | 45.0% | |
| AAGCTTGTCAAGGACCCTAA+AGG | - | chr6_4:2533967-2533986 | None:intergenic | 45.0% | |
| ! | AGGTCCCCTCTTTTCGTAAA+TGG | - | chr6_4:2534063-2534082 | None:intergenic | 45.0% |
| GTTTGTATCGTGCAATCCGT+TGG | + | chr6_4:2534100-2534119 | Msa0970890:intron | 45.0% | |
| GCAGGATAAGAAACTCTCCA+AGG | - | chr6_4:2534336-2534355 | None:intergenic | 45.0% | |
| AACGAGGGAATGACAGCAAA+GGG | - | chr6_4:2534360-2534379 | None:intergenic | 45.0% | |
| GAACAACTTACCGGGAGTTA+TGG | - | chr6_4:2534473-2534492 | None:intergenic | 45.0% | |
| TAACTCCCGGTAAGTTGTTC+TGG | + | chr6_4:2534473-2534492 | Msa0970890:intron | 45.0% | |
| AACTCCCGGTAAGTTGTTCT+GGG | + | chr6_4:2534474-2534493 | Msa0970890:intron | 45.0% | |
| AAAGCCCAGAACAACTTACC+GGG | - | chr6_4:2534481-2534500 | None:intergenic | 45.0% | |
| ! | GAACAGACTTCTGTTTTCCG+TGG | + | chr6_4:2534648-2534667 | Msa0970890:intron | 45.0% |
| GTGTTGTCAATAGCGAACCA+CGG | - | chr6_4:2534668-2534687 | None:intergenic | 45.0% | |
| TCTACATAGTGCATGGCAAG+TGG | + | chr6_4:2534768-2534787 | Msa0970890:intron | 45.0% | |
| CTACATAGTGCATGGCAAGT+GGG | + | chr6_4:2534769-2534788 | Msa0970890:intron | 45.0% | |
| GAGACCCGAGTCAAAGAATT+TGG | + | chr6_4:2534870-2534889 | Msa0970890:CDS | 45.0% | |
| GAAGCCCCAATGGAACAATA+AGG | + | chr6_4:2534910-2534929 | Msa0970890:CDS | 45.0% | |
| CACCCACAAAAAAACACGTG+TGG | - | chr6_4:2535034-2535053 | None:intergenic | 45.0% | |
| AACATGGATGAGGGGAAATG+CGG | + | chr6_4:2535691-2535710 | Msa0970890:intron | 45.0% | |
| GGTTCACGAAATACAGTACC+TGG | - | chr6_4:2535925-2535944 | None:intergenic | 45.0% | |
| AATACCAGCTTAAGCTTCCC+TGG | - | chr6_4:2536156-2536175 | None:intergenic | 45.0% | |
| GGGAAGCTTAAGCTGGTATT+TGG | + | chr6_4:2536156-2536175 | Msa0970890:CDS | 45.0% | |
| ACATAGCAAGAGCTACACCA+GGG | - | chr6_4:2536348-2536367 | None:intergenic | 45.0% | |
| TACATAGCAAGAGCTACACC+AGG | - | chr6_4:2536349-2536368 | None:intergenic | 45.0% | |
| CAGCAAATGCTCGAATTGAC+TGG | - | chr6_4:2536485-2536504 | None:intergenic | 45.0% | |
| TGCTGAATCATCCATGTCAC+TGG | + | chr6_4:2536500-2536519 | Msa0970890:CDS | 45.0% | |
| GTAACTTCAGGTACGAGCAT+AGG | + | chr6_4:2536856-2536875 | Msa0970890:intron | 45.0% | |
| AAAGTGAAGGTGGGTATGTC+TGG | + | chr6_4:2536910-2536929 | Msa0970890:CDS | 45.0% | |
| AAGTGAAGGTGGGTATGTCT+GGG | + | chr6_4:2536911-2536930 | Msa0970890:CDS | 45.0% | |
| TTGACCACTTTCCATGGCTT+GGG | - | chr6_4:2537093-2537112 | None:intergenic | 45.0% | |
| ATTGACCACTTTCCATGGCT+TGG | - | chr6_4:2537094-2537113 | None:intergenic | 45.0% | |
| AAGGGCTAATCGACTACATG+AGG | - | chr6_4:2537658-2537677 | None:intergenic | 45.0% | |
| CAGCTCATGGAACTGTAACT+CGG | + | chr6_4:2537986-2538005 | Msa0970890:CDS | 45.0% | |
| GATCTTGCCCTTCTGATTCA+TGG | + | chr6_4:2538483-2538502 | Msa0970890:CDS | 45.0% | |
| CTTAGGCCCATGAATCAGAA+GGG | - | chr6_4:2538493-2538512 | None:intergenic | 45.0% | |
| ACTTAGGCCCATGAATCAGA+AGG | - | chr6_4:2538494-2538513 | None:intergenic | 45.0% | |
| TGTTATTAAGCTCGGGCAGA+GGG | + | chr6_4:2538916-2538935 | Msa0970890:intron | 45.0% | |
| ACACTAAGAATGGGGAAGCA+GGG | - | chr6_4:2539237-2539256 | None:intergenic | 45.0% | |
| AAAAAAACTGGAGTGGCAGC+TGG | + | chr6_4:2539510-2539529 | Msa0970890:three_prime_UTR | 45.0% | |
| AGATCGGTGCATGATGAGGA+AGG | - | chr6_4:2532009-2532028 | None:intergenic | 50.0% | |
| AGAGAGATCGGTGCATGATG+AGG | - | chr6_4:2532013-2532032 | None:intergenic | 50.0% | |
| !! | AAGAAGCGAAGCATCGAAGG+GGG | - | chr6_4:2532072-2532091 | None:intergenic | 50.0% |
| !! | GAAGAAGCGAAGCATCGAAG+GGG | - | chr6_4:2532073-2532092 | None:intergenic | 50.0% |
| ! | CTCGTCAGTGTCGAACTGTT+TGG | + | chr6_4:2533154-2533173 | Msa0970890:intron | 50.0% |
| GCTTACTGGGAGAACCTGTT+AGG | + | chr6_4:2533867-2533886 | Msa0970890:intron | 50.0% | |
| ACGAGGGAATGACAGCAAAG+GGG | - | chr6_4:2534359-2534378 | None:intergenic | 50.0% | |
| GAACGAGGGAATGACAGCAA+AGG | - | chr6_4:2534361-2534380 | None:intergenic | 50.0% | |
| CTGTCAAATAGCAGCTGCAG+TGG | + | chr6_4:2534594-2534613 | Msa0970890:intron | 50.0% | |
| TCTATGTGGAGAAGCCCCAA+TGG | + | chr6_4:2534900-2534919 | Msa0970890:CDS | 50.0% | |
| AAAACACCAACAGGTTCCCC+CGG | - | chr6_4:2535349-2535368 | None:intergenic | 50.0% | |
| ACATGGATGAGGGGAAATGC+GGG | + | chr6_4:2535692-2535711 | Msa0970890:intron | 50.0% | |
| ! | CATGGCTTGGGTCCAAGAAT+TGG | - | chr6_4:2537081-2537100 | None:intergenic | 50.0% |
| CAATTCTTGGACCCAAGCCA+TGG | + | chr6_4:2537079-2537098 | Msa0970890:intron | 50.0% | |
| ! | CTTGTCCAAGCGATTTGGCT+CGG | + | chr6_4:2537144-2537163 | Msa0970890:intron | 50.0% |
| GGCTAATCGACTACATGAGG+TGG | - | chr6_4:2537655-2537674 | None:intergenic | 50.0% | |
| TGTGCAGGATTCGGCTCATT+GGG | + | chr6_4:2537796-2537815 | Msa0970890:intron | 50.0% | |
| GGCTTCTAATGTCTTGCCGT+CGG | - | chr6_4:2537962-2537981 | None:intergenic | 50.0% | |
| TACAGTTCCATGAGCTGCCT+CGG | - | chr6_4:2537983-2538002 | None:intergenic | 50.0% | |
| ATTTGCATGGACACGAGGAC+TGG | + | chr6_4:2538065-2538084 | Msa0970890:CDS | 50.0% | |
| GTTATGTACCAGAGCCAAGC+TGG | + | chr6_4:2538377-2538396 | Msa0970890:intron | 50.0% | |
| TGTGTTGAGACAGTGGAGTC+AGG | + | chr6_4:2538447-2538466 | Msa0970890:CDS | 50.0% | |
| CTCTGCCCGAGCTTAATAAC+AGG | - | chr6_4:2538917-2538936 | None:intergenic | 50.0% | |
| CTGTTATTAAGCTCGGGCAG+AGG | + | chr6_4:2538915-2538934 | Msa0970890:intron | 50.0% | |
| ACCGAGGAATTTCGATGCTG+TGG | + | chr6_4:2539045-2539064 | Msa0970890:CDS | 50.0% | |
| ! | GCCACAGCATCGAAATTCCT+CGG | - | chr6_4:2539049-2539068 | None:intergenic | 50.0% |
| GTTAGACTGTTGCAGGCTCT+CGG | - | chr6_4:2539093-2539112 | None:intergenic | 50.0% | |
| CACTAAGAATGGGGAAGCAG+GGG | - | chr6_4:2539236-2539255 | None:intergenic | 50.0% | |
| GACACTAAGAATGGGGAAGC+AGG | - | chr6_4:2539238-2539257 | None:intergenic | 50.0% | |
| CACATCGTCCCGATATACGT+TGG | - | chr6_4:2539296-2539315 | None:intergenic | 50.0% | |
| GGCAAACACTACTGCAGTAG+AGG | + | chr6_4:2539336-2539355 | Msa0970890:three_prime_UTR | 50.0% | |
| CGAGGGAATGACAGCAAAGG+GGG | - | chr6_4:2534358-2534377 | None:intergenic | 55.0% | |
| TGGACCAGGGAAGCTTAAGC+TGG | + | chr6_4:2536149-2536168 | Msa0970890:CDS | 55.0% | |
| TGGACCCAAGCCATGGAAAG+TGG | + | chr6_4:2537086-2537105 | Msa0970890:intron | 55.0% | |
| CGAGCCAAATCGCTTGGACA+AGG | - | chr6_4:2537146-2537165 | None:intergenic | 55.0% | |
| GTGTGCAGGATTCGGCTCAT+TGG | + | chr6_4:2537795-2537814 | Msa0970890:intron | 55.0% | |
| GGGTCTCATGACTTCTGTGC+TGG | + | chr6_4:2537816-2537835 | Msa0970890:CDS | 55.0% | |
| CGGCAAGACATTAGAAGCCG+AGG | + | chr6_4:2537963-2537982 | Msa0970890:CDS | 55.0% | |
| TTAGAAGCCGAGGCAGCTCA+TGG | + | chr6_4:2537973-2537992 | Msa0970890:CDS | 55.0% | |
| GGACACGAGGACTGGAACAT+AGG | + | chr6_4:2538073-2538092 | Msa0970890:CDS | 55.0% | |
| GGCTGCATGTGTTGAGACAG+TGG | + | chr6_4:2538440-2538459 | Msa0970890:CDS | 55.0% | |
| ! | TGGATTTGTGCAGGGTGTCC+AGG | + | chr6_4:2539007-2539026 | Msa0970890:intron | 55.0% |
| ! | GGATTTGTGCAGGGTGTCCA+GGG | + | chr6_4:2539008-2539027 | Msa0970890:intron | 55.0% |
| AACTGGAGTGGCAGCTGGAA+TGG | + | chr6_4:2539515-2539534 | Msa0970890:three_prime_UTR | 55.0% | |
| GGAATGACAGCAAAGGGGGC+AGG | - | chr6_4:2534354-2534373 | None:intergenic | 60.0% | |
| TGCTTACCGGGGGAACCTGT+TGG | + | chr6_4:2535340-2535359 | Msa0970890:intron | 60.0% | |
| !! | TCCAAGCGATTTGGCTCGGC+TGG | + | chr6_4:2537148-2537167 | Msa0970890:intron | 60.0% |
| ACCAGCCGAGCCAAATCGCT+TGG | - | chr6_4:2537152-2537171 | None:intergenic | 60.0% | |
| !! | CTGGAGCGTCGCCGTCTTCT+GGG | - | chr6_4:2536297-2536316 | None:intergenic | 65.0% |
| !! | ACTGGAGCGTCGCCGTCTTC+TGG | - | chr6_4:2536298-2536317 | None:intergenic | 65.0% |
| AGAAGACGGCGACGCTCCAG+TGG | + | chr6_4:2536297-2536316 | Msa0970890:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 2531800 | 2539601 | 2531800 | ID=Msa0970890;Name=Msa0970890 |
| chr6_4 | mRNA | 2531800 | 2539601 | 2531800 | ID=Msa0970890-mRNA-1;Parent=Msa0970890;Name=Msa0970890-mRNA-1;_AED=0.09;_eAED=0.09;_QI=87|0.78|0.86|0.93|1|1|15|527|473 |
| chr6_4 | exon | 2531800 | 2532139 | 2531800 | ID=Msa0970890-mRNA-1:exon:1212;Parent=Msa0970890-mRNA-1 |
| chr6_4 | exon | 2532231 | 2532274 | 2532231 | ID=Msa0970890-mRNA-1:exon:1213;Parent=Msa0970890-mRNA-1 |
| chr6_4 | exon | 2533496 | 2533605 | 2533496 | ID=Msa0970890-mRNA-1:exon:1214;Parent=Msa0970890-mRNA-1 |
| chr6_4 | exon | 2533710 | 2533735 | 2533710 | ID=Msa0970890-mRNA-1:exon:1215;Parent=Msa0970890-mRNA-1 |
| chr6_4 | exon | 2534868 | 2534945 | 2534868 | ID=Msa0970890-mRNA-1:exon:1216;Parent=Msa0970890-mRNA-1 |
| chr6_4 | exon | 2535926 | 2535979 | 2535926 | ID=Msa0970890-mRNA-1:exon:1217;Parent=Msa0970890-mRNA-1 |
| chr6_4 | exon | 2536076 | 2536177 | 2536076 | ID=Msa0970890-mRNA-1:exon:1218;Parent=Msa0970890-mRNA-1 |
| chr6_4 | exon | 2536293 | 2536381 | 2536293 | ID=Msa0970890-mRNA-1:exon:1219;Parent=Msa0970890-mRNA-1 |
| chr6_4 | exon | 2536486 | 2536610 | 2536486 | ID=Msa0970890-mRNA-1:exon:1220;Parent=Msa0970890-mRNA-1 |
| chr6_4 | exon | 2536708 | 2536776 | 2536708 | ID=Msa0970890-mRNA-1:exon:1221;Parent=Msa0970890-mRNA-1 |
| chr6_4 | exon | 2536866 | 2536981 | 2536866 | ID=Msa0970890-mRNA-1:exon:1222;Parent=Msa0970890-mRNA-1 |
| chr6_4 | exon | 2537803 | 2537837 | 2537803 | ID=Msa0970890-mRNA-1:exon:1223;Parent=Msa0970890-mRNA-1 |
| chr6_4 | exon | 2537952 | 2538094 | 2537952 | ID=Msa0970890-mRNA-1:exon:1224;Parent=Msa0970890-mRNA-1 |
| chr6_4 | exon | 2538389 | 2538511 | 2538389 | ID=Msa0970890-mRNA-1:exon:1225;Parent=Msa0970890-mRNA-1 |
| chr6_4 | exon | 2539020 | 2539601 | 2539020 | ID=Msa0970890-mRNA-1:exon:1226;Parent=Msa0970890-mRNA-1 |
| chr6_4 | five_prime_UTR | 2531800 | 2531886 | 2531800 | ID=Msa0970890-mRNA-1:five_prime_utr;Parent=Msa0970890-mRNA-1 |
| chr6_4 | CDS | 2531887 | 2532139 | 2531887 | ID=Msa0970890-mRNA-1:cds;Parent=Msa0970890-mRNA-1 |
| chr6_4 | CDS | 2532231 | 2532274 | 2532231 | ID=Msa0970890-mRNA-1:cds;Parent=Msa0970890-mRNA-1 |
| chr6_4 | CDS | 2533496 | 2533605 | 2533496 | ID=Msa0970890-mRNA-1:cds;Parent=Msa0970890-mRNA-1 |
| chr6_4 | CDS | 2533710 | 2533735 | 2533710 | ID=Msa0970890-mRNA-1:cds;Parent=Msa0970890-mRNA-1 |
| chr6_4 | CDS | 2534868 | 2534945 | 2534868 | ID=Msa0970890-mRNA-1:cds;Parent=Msa0970890-mRNA-1 |
| chr6_4 | CDS | 2535926 | 2535979 | 2535926 | ID=Msa0970890-mRNA-1:cds;Parent=Msa0970890-mRNA-1 |
| chr6_4 | CDS | 2536076 | 2536177 | 2536076 | ID=Msa0970890-mRNA-1:cds;Parent=Msa0970890-mRNA-1 |
| chr6_4 | CDS | 2536293 | 2536381 | 2536293 | ID=Msa0970890-mRNA-1:cds;Parent=Msa0970890-mRNA-1 |
| chr6_4 | CDS | 2536486 | 2536610 | 2536486 | ID=Msa0970890-mRNA-1:cds;Parent=Msa0970890-mRNA-1 |
| chr6_4 | CDS | 2536708 | 2536776 | 2536708 | ID=Msa0970890-mRNA-1:cds;Parent=Msa0970890-mRNA-1 |
| chr6_4 | CDS | 2536866 | 2536981 | 2536866 | ID=Msa0970890-mRNA-1:cds;Parent=Msa0970890-mRNA-1 |
| chr6_4 | CDS | 2537803 | 2537837 | 2537803 | ID=Msa0970890-mRNA-1:cds;Parent=Msa0970890-mRNA-1 |
| chr6_4 | CDS | 2537952 | 2538094 | 2537952 | ID=Msa0970890-mRNA-1:cds;Parent=Msa0970890-mRNA-1 |
| chr6_4 | CDS | 2538389 | 2538511 | 2538389 | ID=Msa0970890-mRNA-1:cds;Parent=Msa0970890-mRNA-1 |
| chr6_4 | CDS | 2539020 | 2539074 | 2539020 | ID=Msa0970890-mRNA-1:cds;Parent=Msa0970890-mRNA-1 |
| chr6_4 | three_prime_UTR | 2539075 | 2539601 | 2539075 | ID=Msa0970890-mRNA-1:three_prime_utr;Parent=Msa0970890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
