Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0970930 | XP_003618179.1 | 93.238 | 488 | 18 | 8 | 1 | 479 | 1 | 482 | 0.0 | 907 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0970930 | sp|Q8LPJ5|ICDHP_ARATH | 82.299 | 435 | 62 | 4 | 55 | 475 | 48 | 481 | 0.0 | 748 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0970930 | G7KHI5 | 93.238 | 488 | 18 | 8 | 1 | 479 | 1 | 482 | 0.0 | 907 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0933510 | Msa0970930 | 0.845549 | 3.789390e-59 | -8.615850e-47 |
| Msa0970890 | Msa0970930 | 0.922120 | 1.484973e-88 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0970930 | MtrunA17_Chr6g0449881 | 93.238 | 488 | 18 | 8 | 1 | 479 | 1 | 482 | 0.0 | 907 |
| Msa0970930 | MtrunA17_Chr5g0433901 | 79.557 | 406 | 76 | 3 | 74 | 473 | 6 | 410 | 0.0 | 669 |
| Msa0970930 | MtrunA17_Chr2g0309401 | 77.317 | 410 | 86 | 3 | 74 | 477 | 6 | 414 | 0.0 | 661 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0970930 | AT5G14590.1 | 82.299 | 435 | 62 | 4 | 55 | 475 | 48 | 481 | 0.0 | 748 |
| Msa0970930 | AT1G54340.1 | 77.037 | 405 | 87 | 2 | 74 | 473 | 6 | 409 | 0.0 | 655 |
| Msa0970930 | AT1G65930.1 | 77.094 | 406 | 84 | 4 | 74 | 473 | 6 | 408 | 0.0 | 650 |
| Msa0970930 | AT1G54340.2 | 76.792 | 293 | 62 | 2 | 74 | 361 | 6 | 297 | 5.63e-169 | 478 |
Find 139 sgRNAs with CRISPR-Local
Find 439 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATGCTTTCCTAACATTCT+AGG | 0.153931 | 6_4:-2592468 | None:intergenic |
| GGGTATATTGCGGCATATTA+TGG | 0.223017 | 6_4:-2589248 | None:intergenic |
| CCAAAGTCCCAAAGAATAAT+TGG | 0.239083 | 6_4:-2592517 | None:intergenic |
| TAAATTGTCCAATTATTCTT+TGG | 0.243027 | 6_4:+2592509 | Msa0970930:three_prime_UTR |
| GACATTACCAGAAATAATTC+TGG | 0.266401 | 6_4:-2589269 | None:intergenic |
| CAGATTTAAAGACATATTTC+AGG | 0.273780 | 6_4:+2590011 | Msa0970930:intron |
| CTGGAGCGTCGCCGTCTTCT+GGG | 0.277774 | 6_4:-2589599 | None:intergenic |
| GGGAAGCTTAAGCTGGTATT+TGG | 0.283456 | 6_4:+2589460 | Msa0970930:CDS |
| GAGACCCGAGTCAAAGAATT+TGG | 0.286449 | 6_4:+2588173 | Msa0970930:CDS |
| CTTTGCTGAGAAAGTTAAAT+TGG | 0.296379 | 6_4:+2587002 | Msa0970930:intron |
| AAATCACAGCCAACGTATAT+CGG | 0.306906 | 6_4:+2592595 | Msa0970930:three_prime_UTR |
| ATGAAATGACAAGGATTATA+TGG | 0.309197 | 6_4:+2585539 | Msa0970930:CDS |
| AAAGTGAAGGTGGGTATGTC+TGG | 0.310572 | 6_4:+2590216 | Msa0970930:CDS |
| CCAATTATTCTTTGGGACTT+TGG | 0.315222 | 6_4:+2592517 | Msa0970930:three_prime_UTR |
| AATATACCCAGAATTATTTC+TGG | 0.315808 | 6_4:+2589262 | Msa0970930:CDS |
| GAATGGAAGAGAAGGTTGTT+AGG | 0.318076 | 6_4:-2585264 | None:intergenic |
| GCATGCCTACCAATACAAAT+TGG | 0.320367 | 6_4:-2589391 | None:intergenic |
| GATCTTGCCCTTCTGATTCA+TGG | 0.323534 | 6_4:+2591791 | Msa0970930:CDS |
| AAATTGTCCAATTATTCTTT+GGG | 0.336437 | 6_4:+2592510 | Msa0970930:three_prime_UTR |
| AGTTTGAAGAACACTCAATA+TGG | 0.356857 | 6_4:+2590061 | Msa0970930:CDS |
| ATGTTCCTTATTGTTCCATT+GGG | 0.363670 | 6_4:-2588218 | None:intergenic |
| AATCAGAAGGGCAAGATCTT+TGG | 0.363956 | 6_4:-2591786 | None:intergenic |
| AATCCTAGCCCTAGAATGTT+AGG | 0.365987 | 6_4:+2592459 | Msa0970930:three_prime_UTR |
| GGTATATTGCGGCATATTAT+GGG | 0.383958 | 6_4:-2589247 | None:intergenic |
| CGCTAATCCAATCGTCGAAA+TGG | 0.387210 | 6_4:+2585419 | Msa0970930:CDS |
| TTAAATTGGAAGGTGCAATT+AGG | 0.391826 | 6_4:+2587016 | Msa0970930:CDS |
| TGGATTTGTGCAGGGTGTCC+AGG | 0.395318 | 6_4:+2592316 | Msa0970930:intron |
| AATGTTCCTTATTGTTCCAT+TGG | 0.398523 | 6_4:-2588219 | None:intergenic |
| GCAGCTTATCTTTCCTTACT+TGG | 0.398625 | 6_4:+2586794 | Msa0970930:intron |
| CATACATGTTAGACTGTTGC+AGG | 0.400602 | 6_4:-2592408 | None:intergenic |
| TTGATGATTTAGTGCATGTT+TGG | 0.406729 | 6_4:+2592877 | Msa0970930:three_prime_UTR |
| CAGTCCAAATTCTTTGACTC+GGG | 0.407260 | 6_4:-2588177 | None:intergenic |
| ATTGCGATTGTGATTATTGA+AGG | 0.411352 | 6_4:-2585340 | None:intergenic |
| TTCAGGAGGTTTATGAAGAA+AGG | 0.418139 | 6_4:+2590028 | Msa0970930:CDS |
| TGTGCAGGATTCGGCTCATT+GGG | 0.424875 | 6_4:+2591102 | Msa0970930:intron |
| AATGGAAGAGAAGGTTGTTA+GGG | 0.425670 | 6_4:-2585263 | None:intergenic |
| CAGTAGTGTTAGCCTATGTT+TGG | 0.429015 | 6_4:-2592638 | None:intergenic |
| TGGAAGAAACCAATTTGTAT+TGG | 0.432227 | 6_4:+2589382 | Msa0970930:CDS |
| GTGTGCAGGATTCGGCTCAT+TGG | 0.439024 | 6_4:+2591101 | Msa0970930:intron |
| TTTATGTTCAAATCCAAGTA+AGG | 0.439169 | 6_4:-2586807 | None:intergenic |
| TGTATTGGTAGGCATGCTTT+TGG | 0.443034 | 6_4:+2589397 | Msa0970930:CDS |
| TTACCGTCCATTTCGACGAT+TGG | 0.444726 | 6_4:-2585426 | None:intergenic |
| TTTCCTAACATTCTAGGGCT+AGG | 0.446110 | 6_4:-2592462 | None:intergenic |
| GAAGCCCCAATGGAACAATA+AGG | 0.446836 | 6_4:+2588213 | Msa0970930:CDS |
| AATGCTTTCCTAACATTCTA+GGG | 0.452269 | 6_4:-2592467 | None:intergenic |
| AACTGGAGTGGCAGCTGGAA+TGG | 0.453158 | 6_4:+2592824 | Msa0970930:three_prime_UTR |
| GATTGGATTAGCGACATGAA+TGG | 0.457803 | 6_4:-2585409 | None:intergenic |
| GACACTAAGAATGGGGAAGC+AGG | 0.458019 | 6_4:-2592546 | None:intergenic |
| GGACACGAGGACTGGAACAT+AGG | 0.467878 | 6_4:+2591381 | Msa0970930:CDS |
| TACAGTTCCATGAGCTGCCT+CGG | 0.471319 | 6_4:-2591288 | None:intergenic |
| TGAAGCAATACTGTTCGTAC+TGG | 0.478811 | 6_4:-2591348 | None:intergenic |
| ATGGAAGATGATCAAGGATA+AGG | 0.491495 | 6_4:+2585558 | Msa0970930:CDS |
| CTGCAACAGTCTAACATGTA+TGG | 0.492491 | 6_4:+2592409 | Msa0970930:exon |
| AAGAAGAAGCGAAGCATCGA+AGG | 0.496959 | 6_4:-2585377 | None:intergenic |
| AAGGAGTTGAATGGAAGAGA+AGG | 0.497972 | 6_4:-2585272 | None:intergenic |
| CAAAGTGATTTACTTGCTCA+AGG | 0.500873 | 6_4:+2590266 | Msa0970930:CDS |
| AATACCAGCTTAAGCTTCCC+TGG | 0.502028 | 6_4:-2589457 | None:intergenic |
| GGGTCTCATGACTTCTGTGC+TGG | 0.504679 | 6_4:+2591122 | Msa0970930:CDS |
| ATCTTGCCCTTCTGATTCAT+GGG | 0.504827 | 6_4:+2591792 | Msa0970930:CDS |
| CTTGATGTTCATAATTTCAA+AGG | 0.505521 | 6_4:+2589627 | Msa0970930:CDS |
| TTCTCAAGAAATATGATGGC+AGG | 0.506640 | 6_4:+2589873 | Msa0970930:CDS |
| GCTGAGAAAGTTAAATTGGA+AGG | 0.507090 | 6_4:+2587006 | Msa0970930:intron |
| TTATGAACATCAAGCTCCAC+TGG | 0.507274 | 6_4:-2589618 | None:intergenic |
| GTTCATAATTTCAAAGGCCC+TGG | 0.508228 | 6_4:+2589633 | Msa0970930:CDS |
| ATTTGCATGGACACGAGGAC+TGG | 0.508607 | 6_4:+2591373 | Msa0970930:CDS |
| AATCACAGCCAACGTATATC+GGG | 0.509033 | 6_4:+2592596 | Msa0970930:three_prime_UTR |
| TGTGTTGAGACAGTGGAGTC+AGG | 0.516129 | 6_4:+2591755 | Msa0970930:CDS |
| ACAATTCTCAAGAAATATGA+TGG | 0.517960 | 6_4:+2589869 | Msa0970930:CDS |
| GTTATGTACCAGAGCCAAGC+TGG | 0.519400 | 6_4:+2591685 | Msa0970930:intron |
| AGGAAGAGTGATGATGAAGA+AGG | 0.524604 | 6_4:-2585291 | None:intergenic |
| ATTGGATTAGCGACATGAAT+GGG | 0.525305 | 6_4:-2585408 | None:intergenic |
| GCCACTGATACAGTAATCAA+TGG | 0.528157 | 6_4:+2589433 | Msa0970930:CDS |
| TGCTGAATCATCCATGTCAC+TGG | 0.529646 | 6_4:+2589805 | Msa0970930:CDS |
| TTAGAAGCCGAGGCAGCTCA+TGG | 0.530661 | 6_4:+2591281 | Msa0970930:CDS |
| GTTAGACTGTTGCAGGCTCT+CGG | 0.534715 | 6_4:-2592401 | None:intergenic |
| GGATTTGTGCAGGGTGTCCA+GGG | 0.537770 | 6_4:+2592317 | Msa0970930:intron |
| TCAGTCCAAATTCTTTGACT+CGG | 0.540110 | 6_4:-2588178 | None:intergenic |
| ACATTACCAGAAATAATTCT+GGG | 0.543809 | 6_4:-2589268 | None:intergenic |
| TGCTATGTATAATGTTGATG+AGG | 0.548975 | 6_4:+2589665 | Msa0970930:CDS |
| TGGACCAGGGAAGCTTAAGC+TGG | 0.551492 | 6_4:+2589453 | Msa0970930:CDS |
| ACACTAAGAATGGGGAAGCA+GGG | 0.554817 | 6_4:-2592545 | None:intergenic |
| AGAAACCAATTTGTATTGGT+AGG | 0.556282 | 6_4:+2589386 | Msa0970930:CDS |
| AGAAGACGGCGACGCTCCAG+TGG | 0.558871 | 6_4:+2589602 | Msa0970930:CDS |
| CAGCTCATGGAACTGTAACT+CGG | 0.560450 | 6_4:+2591294 | Msa0970930:CDS |
| AGATAGCATTGTGAGAGTGC+TGG | 0.561723 | 6_4:-2585223 | None:intergenic |
| CACAGCATCGATAAATTCCT+CGG | 0.561743 | 6_4:-2592355 | None:intergenic |
| GTATTGCTTCAATATTTGCA+TGG | 0.563391 | 6_4:+2591360 | Msa0970930:CDS |
| GGCTAACACTACTGCAGTAG+AGG | 0.567750 | 6_4:+2592647 | Msa0970930:three_prime_UTR |
| TGGGCTTGCAAGAATTATGA+TGG | 0.572955 | 6_4:+2590236 | Msa0970930:CDS |
| GTAGAAGTTTATCCAAACAT+AGG | 0.573616 | 6_4:+2592626 | Msa0970930:three_prime_UTR |
| GGTGTTCAAGTAATATTCCC+TGG | 0.574655 | 6_4:-2592334 | None:intergenic |
| AGATCGGTGCATGATGAGGA+AGG | 0.576583 | 6_4:-2585311 | None:intergenic |
| AGAGAGATCGGTGCATGATG+AGG | 0.578673 | 6_4:-2585315 | None:intergenic |
| AAATCAAAATCAATACTGCA+TGG | 0.578689 | 6_4:-2592856 | None:intergenic |
| AGAAGAAGCGAAGCATCGAA+GGG | 0.579584 | 6_4:-2585376 | None:intergenic |
| CACTAAGAATGGGGAAGCAG+GGG | 0.579590 | 6_4:-2592544 | None:intergenic |
| TTAGGAAAGCATTGAACAGA+GGG | 0.580551 | 6_4:+2592477 | Msa0970930:three_prime_UTR |
| AAGTGAAGGTGGGTATGTCT+GGG | 0.583822 | 6_4:+2590217 | Msa0970930:CDS |
| GAAAATCACTCACTTGAGAG+TGG | 0.584262 | 6_4:-2586898 | None:intergenic |
| GGCTTCTAATGTCTTGCCGT+CGG | 0.585294 | 6_4:-2591267 | None:intergenic |
| AATCCAATCGTCGAAATGGA+CGG | 0.587752 | 6_4:+2585423 | Msa0970930:CDS |
| ACTTAGGCCCATGAATCAGA+AGG | 0.587974 | 6_4:-2591799 | None:intergenic |
| GATTATATGGAAGATGATCA+AGG | 0.590189 | 6_4:+2585552 | Msa0970930:CDS |
| TATGCACTCAAAAGTGAAGG+TGG | 0.592170 | 6_4:+2590206 | Msa0970930:CDS |
| AGGAGGTTTATGAAGAAAGG+TGG | 0.594881 | 6_4:+2590031 | Msa0970930:CDS |
| GTAACTTCAGGTACGAGCAT+AGG | 0.596445 | 6_4:+2590162 | Msa0970930:intron |
| ATGATGAAGAAGGAGTTGAA+TGG | 0.597283 | 6_4:-2585281 | None:intergenic |
| TCAATATTTGCATGGACACG+AGG | 0.602243 | 6_4:+2591368 | Msa0970930:CDS |
| TCCATTGATTACTGTATCAG+TGG | 0.602369 | 6_4:-2589434 | None:intergenic |
| GATACAGTAATCAATGGACC+AGG | 0.603039 | 6_4:+2589439 | Msa0970930:CDS |
| TCTAATTCAGTCCCAGAAGA+CGG | 0.605583 | 6_4:+2589588 | Msa0970930:intron |
| AAATAATTCTGGGTATATTG+CGG | 0.612272 | 6_4:-2589258 | None:intergenic |
| GGCTGCATGTGTTGAGACAG+TGG | 0.612372 | 6_4:+2591748 | Msa0970930:CDS |
| ATTTAAAGACATATTTCAGG+AGG | 0.612668 | 6_4:+2590014 | Msa0970930:CDS |
| CGAGGAATTTATCGATGCTG+TGG | 0.613365 | 6_4:+2592356 | Msa0970930:CDS |
| TGTTCCTTATTGTTCCATTG+GGG | 0.614208 | 6_4:-2588217 | None:intergenic |
| CGGCAAGACATTAGAAGCCG+AGG | 0.619121 | 6_4:+2591271 | Msa0970930:CDS |
| TCTATGTGGAGAAGCCCCAA+TGG | 0.620576 | 6_4:+2588203 | Msa0970930:CDS |
| AGGTTTATGAAGAAAGGTGG+CGG | 0.620816 | 6_4:+2590034 | Msa0970930:CDS |
| GCATAGGCTAATTGATGACA+TGG | 0.623095 | 6_4:+2590178 | Msa0970930:CDS |
| AATTTGCAGTTATCTTCCGA+CGG | 0.625126 | 6_4:+2591251 | Msa0970930:intron |
| AATTTGGACTGAAGTCTATG+TGG | 0.627890 | 6_4:+2588189 | Msa0970930:CDS |
| TTATTGAAGGAAAGAGAGAT+CGG | 0.630912 | 6_4:-2585327 | None:intergenic |
| GCATATGCACTCAAAAGTGA+AGG | 0.633024 | 6_4:+2590203 | Msa0970930:CDS |
| TACATAGCAAGAGCTACACC+AGG | 0.633459 | 6_4:-2589651 | None:intergenic |
| TCATCAAAGAGAGAATAAGA+AGG | 0.634745 | 6_4:+2585154 | Msa0970930:five_prime_UTR |
| ATGCACTCAAAAGTGAAGGT+GGG | 0.642981 | 6_4:+2590207 | Msa0970930:CDS |
| TCTTAGGTGATGAAATGACA+AGG | 0.649796 | 6_4:+2585530 | Msa0970930:intron |
| ACAAATACAAATTGCACACG+AGG | 0.663431 | 6_4:+2592722 | Msa0970930:three_prime_UTR |
| CTTAGGCCCATGAATCAGAA+GGG | 0.667929 | 6_4:-2591798 | None:intergenic |
| AAGAAGCGAAGCATCGAAGG+GGG | 0.669849 | 6_4:-2585374 | None:intergenic |
| GAAGAAGCGAAGCATCGAAG+GGG | 0.679156 | 6_4:-2585375 | None:intergenic |
| CAAATACAAATTGCACACGA+GGG | 0.693619 | 6_4:+2592723 | Msa0970930:three_prime_UTR |
| GTTAGGAAAGCATTGAACAG+AGG | 0.703075 | 6_4:+2592476 | Msa0970930:three_prime_UTR |
| TAGGCTAATTGATGACATGG+TGG | 0.713030 | 6_4:+2590181 | Msa0970930:CDS |
| ATACAGTAATCAATGGACCA+GGG | 0.726635 | 6_4:+2589440 | Msa0970930:CDS |
| ACATAGCAAGAGCTACACCA+GGG | 0.758638 | 6_4:-2589650 | None:intergenic |
| GGAATATTACTTGAACACCG+AGG | 0.776591 | 6_4:+2592338 | Msa0970930:CDS |
| TAGGAAAGCATTGAACAGAG+GGG | 0.791379 | 6_4:+2592478 | Msa0970930:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTAAATATATTAAATTATT+TGG | + | chr6_4:2586020-2586039 | Msa0970930:intron | 0.0% |
| !! | AACAACAAATATAATAAATA+AGG | - | chr6_4:2585505-2585524 | None:intergenic | 10.0% |
| !!! | TTTTTTTTATCAAATTATTG+TGG | + | chr6_4:2585613-2585632 | Msa0970930:intron | 10.0% |
| !! | AAAGATAAAATAAAGTTAAA+TGG | + | chr6_4:2586298-2586317 | Msa0970930:intron | 10.0% |
| !!! | TGGTTAGTTTTAAATTTTAA+TGG | + | chr6_4:2587324-2587343 | Msa0970930:intron | 15.0% |
| !! | AGAAGTTTCAATTAATAAAT+GGG | - | chr6_4:2587716-2587735 | None:intergenic | 15.0% |
| !! | TAGAAGTTTCAATTAATAAA+TGG | - | chr6_4:2587717-2587736 | None:intergenic | 15.0% |
| !!! | ATGTTCAAATTAATTTTGAA+TGG | - | chr6_4:2588979-2588998 | None:intergenic | 15.0% |
| !!! | ATTCAAAATTAATTTGAACA+TGG | + | chr6_4:2588978-2588997 | Msa0970930:intron | 15.0% |
| !!! | TGTTTAAAATGAAAAATTGA+CGG | - | chr6_4:2589536-2589555 | None:intergenic | 15.0% |
| !!! | ATTTAACTTAAGCAATTTTT+TGG | + | chr6_4:2590630-2590649 | Msa0970930:intron | 15.0% |
| !!! | TAGAGAAGTTTTTAAAAAAA+AGG | - | chr6_4:2591618-2591637 | None:intergenic | 15.0% |
| !! | AATATTGAAATGATTAAACA+TGG | - | chr6_4:2591844-2591863 | None:intergenic | 15.0% |
| !! | ACTGATATAGTTATATATAT+TGG | - | chr6_4:2592194-2592213 | None:intergenic | 15.0% |
| !!! | TATTTGTTGTTTTGTTTCTT+AGG | + | chr6_4:2585514-2585533 | Msa0970930:intron | 20.0% |
| !!! | ATTTTTTCAATTAAGATTGC+AGG | + | chr6_4:2585733-2585752 | Msa0970930:intron | 20.0% |
| !!! | TTTTTTCAATTAAGATTGCA+GGG | + | chr6_4:2585734-2585753 | Msa0970930:intron | 20.0% |
| !!! | AACATAAAGTATTTTGATCT+GGG | + | chr6_4:2586822-2586841 | Msa0970930:CDS | 20.0% |
| !! | AGTATATATTATAGAGTTTC+TGG | + | chr6_4:2587072-2587091 | Msa0970930:intron | 20.0% |
| !!! | ACAATAAGGAACATTTTAAA+TGG | + | chr6_4:2588227-2588246 | Msa0970930:CDS | 20.0% |
| !! | ATGATAGAATACAAGAAAAT+AGG | + | chr6_4:2588540-2588559 | Msa0970930:intron | 20.0% |
| !!! | TATCAGTTTATTTAAAGTGA+GGG | - | chr6_4:2588733-2588752 | None:intergenic | 20.0% |
| !!! | ATATCAGTTTATTTAAAGTG+AGG | - | chr6_4:2588734-2588753 | None:intergenic | 20.0% |
| !! | CACTTTAAATAAACTGATAT+TGG | + | chr6_4:2588734-2588753 | Msa0970930:intron | 20.0% |
| !!! | TGACTTGCTATAAATATTAT+CGG | + | chr6_4:2588760-2588779 | Msa0970930:intron | 20.0% |
| !! | GTTCAAAAAATCTATTTGAA+TGG | + | chr6_4:2588863-2588882 | Msa0970930:intron | 20.0% |
| !! | TATCTGAAAATTACAGAATA+TGG | + | chr6_4:2588924-2588943 | Msa0970930:intron | 20.0% |
| !! | ATCTGAAAATTACAGAATAT+GGG | + | chr6_4:2588925-2588944 | Msa0970930:intron | 20.0% |
| !! | TCTTGATTCTTAATTCTTAT+TGG | + | chr6_4:2589308-2589327 | Msa0970930:intron | 20.0% |
| !!! | TTTAAAATGAAAAATTGACG+GGG | - | chr6_4:2589534-2589553 | None:intergenic | 20.0% |
| !!! | GTTTAAAATGAAAAATTGAC+GGG | - | chr6_4:2589535-2589554 | None:intergenic | 20.0% |
| !!! | TAAGCAATTTTTTGGTAATA+TGG | + | chr6_4:2590638-2590657 | Msa0970930:intron | 20.0% |
| !!! | AAGCAATTTTTTGGTAATAT+GGG | + | chr6_4:2590639-2590658 | Msa0970930:intron | 20.0% |
| !!! | TCATCTCTATTTTTTGTTAT+TGG | + | chr6_4:2591202-2591221 | Msa0970930:intron | 20.0% |
| !!! | CATCTCTATTTTTTGTTATT+GGG | + | chr6_4:2591203-2591222 | Msa0970930:intron | 20.0% |
| !! | TTGATGTAGATGAATATAAT+TGG | + | chr6_4:2591508-2591527 | Msa0970930:intron | 20.0% |
| !! | GGATAAAAATGAAAAATTAC+TGG | + | chr6_4:2591706-2591725 | Msa0970930:CDS | 20.0% |
| !!! | TGATGTTTTATTAGAATTTC+TGG | - | chr6_4:2592019-2592038 | None:intergenic | 20.0% |
| !! | AATCAAACAATAAGCAAAAA+AGG | - | chr6_4:2592065-2592084 | None:intergenic | 20.0% |
| !! | TAAATTGTCCAATTATTCTT+TGG | + | chr6_4:2592509-2592528 | Msa0970930:three_prime_UTR | 20.0% |
| !! | AAATTGTCCAATTATTCTTT+GGG | + | chr6_4:2592510-2592529 | Msa0970930:three_prime_UTR | 20.0% |
| !! | CAAAATACTTGAAAAAAAAC+AGG | - | chr6_4:2592795-2592814 | None:intergenic | 20.0% |
| !!! | GTATTTTGTGAAAAAAAAAC+TGG | + | chr6_4:2592807-2592826 | Msa0970930:three_prime_UTR | 20.0% |
| ! | ATGAAATGACAAGGATTATA+TGG | + | chr6_4:2585539-2585558 | Msa0970930:CDS | 25.0% |
| !!! | TTTTTCAATTAAGATTGCAG+GGG | + | chr6_4:2585735-2585754 | Msa0970930:intron | 25.0% |
| ! | ATGATTATAAAAGACACGTT+TGG | - | chr6_4:2585856-2585875 | None:intergenic | 25.0% |
| ! | ACTTACATTTAGTGTCTATT+TGG | - | chr6_4:2585923-2585942 | None:intergenic | 25.0% |
| !!! | TAAGTGTTACTTCATATTGA+AGG | - | chr6_4:2585984-2586003 | None:intergenic | 25.0% |
| !! | TCATTTTCGCAAATCATTAT+AGG | - | chr6_4:2586397-2586416 | None:intergenic | 25.0% |
| !! | ATTGTTTTCATAAGCTATCT+TGG | + | chr6_4:2586581-2586600 | Msa0970930:intron | 25.0% |
| !!! | AACATATCACAAGTTGTTTT+CGG | + | chr6_4:2586638-2586657 | Msa0970930:intron | 25.0% |
| ! | TCAAAAAAGCCAATCTAAAT+AGG | + | chr6_4:2586706-2586725 | Msa0970930:intron | 25.0% |
| ! | TTTATGTTCAAATCCAAGTA+AGG | - | chr6_4:2586810-2586829 | None:intergenic | 25.0% |
| !!! | GAACATAAAGTATTTTGATC+TGG | + | chr6_4:2586821-2586840 | Msa0970930:CDS | 25.0% |
| !!! | ACATAAAGTATTTTGATCTG+GGG | + | chr6_4:2586823-2586842 | Msa0970930:CDS | 25.0% |
| ! | ACATGCATAATATAACACAT+TGG | + | chr6_4:2586940-2586959 | Msa0970930:intron | 25.0% |
| !! | TATTATAGAGTTTCTGGATA+CGG | + | chr6_4:2587078-2587097 | Msa0970930:intron | 25.0% |
| !! | ACCTTATTAGATTTTCTTCA+GGG | + | chr6_4:2587199-2587218 | Msa0970930:intron | 25.0% |
| ! | ATTTATGTCACATATCTTTC+TGG | + | chr6_4:2587224-2587243 | Msa0970930:intron | 25.0% |
| !! | TTTTACCATTTACGAAAAGA+GGG | + | chr6_4:2587358-2587377 | Msa0970930:intron | 25.0% |
| ! | AAATGCATTATGTGAAAACA+AGG | - | chr6_4:2587604-2587623 | None:intergenic | 25.0% |
| !!! | CATTTTTTCTCTTTTTACCT+TGG | + | chr6_4:2587619-2587638 | Msa0970930:intron | 25.0% |
| ! | TGTTTATAAAAACAGAACGA+GGG | - | chr6_4:2587678-2587697 | None:intergenic | 25.0% |
| ! | TTGTTTATAAAAACAGAACG+AGG | - | chr6_4:2587679-2587698 | None:intergenic | 25.0% |
| ! | AAATTAGTGTTGTCAAATAG+TGG | + | chr6_4:2587804-2587823 | Msa0970930:intron | 25.0% |
| ! | AAATTTGTGAGTATGTTACA+AGG | - | chr6_4:2588032-2588051 | None:intergenic | 25.0% |
| ! | ATTGATGTACATATATACAG+TGG | + | chr6_4:2588358-2588377 | Msa0970930:intron | 25.0% |
| ! | TTGTATTCTATCATTACACT+CGG | - | chr6_4:2588534-2588553 | None:intergenic | 25.0% |
| ! | CTTTAATGAAACTAACTAAG+TGG | - | chr6_4:2588602-2588621 | None:intergenic | 25.0% |
| ! | AGTTTCATTAAAGTTGTTTG+AGG | + | chr6_4:2588609-2588628 | Msa0970930:intron | 25.0% |
| ! | CAAATATAAAAAACACCAAC+AGG | - | chr6_4:2588661-2588680 | None:intergenic | 25.0% |
| !! | AATTAATTTGAACATGGATG+AGG | + | chr6_4:2588984-2589003 | Msa0970930:intron | 25.0% |
| !! | ATTAATTTGAACATGGATGA+GGG | + | chr6_4:2588985-2589004 | Msa0970930:intron | 25.0% |
| ! | AAGCAGTGAAAATTAATTTC+CGG | - | chr6_4:2589035-2589054 | None:intergenic | 25.0% |
| ! | AAGCATTTCTAAATTTCTCT+TGG | + | chr6_4:2589184-2589203 | Msa0970930:intron | 25.0% |
| !!! | GGTATTTTTTATTTCTTTCC+AGG | + | chr6_4:2589208-2589227 | Msa0970930:intron | 25.0% |
| ! | AAATAATTCTGGGTATATTG+CGG | - | chr6_4:2589261-2589280 | None:intergenic | 25.0% |
| ! | AATATACCCAGAATTATTTC+TGG | + | chr6_4:2589262-2589281 | Msa0970930:CDS | 25.0% |
| ! | ACATTACCAGAAATAATTCT+GGG | - | chr6_4:2589271-2589290 | None:intergenic | 25.0% |
| ! | ACTAGAAAATTAGTTCCAAA+TGG | - | chr6_4:2589354-2589373 | None:intergenic | 25.0% |
| !!! | GAACTAATTTTCTAGTTTAC+AGG | + | chr6_4:2589358-2589377 | Msa0970930:intron | 25.0% |
| !!! | TAATTTTCTAGTTTACAGGA+TGG | + | chr6_4:2589362-2589381 | Msa0970930:intron | 25.0% |
| ! | CTTGATGTTCATAATTTCAA+AGG | + | chr6_4:2589627-2589646 | Msa0970930:CDS | 25.0% |
| !! | TTTCTTGAGAATTGTGTTTT+TGG | - | chr6_4:2589864-2589883 | None:intergenic | 25.0% |
| ! | ACAATTCTCAAGAAATATGA+TGG | + | chr6_4:2589869-2589888 | Msa0970930:CDS | 25.0% |
| ! | CAGATTTAAAGACATATTTC+AGG | + | chr6_4:2590011-2590030 | Msa0970930:intron | 25.0% |
| ! | ATTTAAAGACATATTTCAGG+AGG | + | chr6_4:2590014-2590033 | Msa0970930:CDS | 25.0% |
| ! | TTACCAGTCATAAAAAACAA+TGG | - | chr6_4:2590361-2590380 | None:intergenic | 25.0% |
| !!! | ATTTTTTCCAATACAGAGAA+AGG | + | chr6_4:2590418-2590437 | Msa0970930:intron | 25.0% |
| ! | TACATCATGATAACTGAAAT+TGG | + | chr6_4:2590481-2590500 | Msa0970930:intron | 25.0% |
| ! | TGATAACTGAAATTGGTTAT+TGG | + | chr6_4:2590488-2590507 | Msa0970930:intron | 25.0% |
| ! | GATAACTGAAATTGGTTATT+GGG | + | chr6_4:2590489-2590508 | Msa0970930:intron | 25.0% |
| ! | CAAAGAAAATAATGATGGTA+TGG | - | chr6_4:2590571-2590590 | None:intergenic | 25.0% |
| ! | CCAAACAAAGAAAATAATGA+TGG | - | chr6_4:2590576-2590595 | None:intergenic | 25.0% |
| !! | CCATCATTATTTTCTTTGTT+TGG | + | chr6_4:2590573-2590592 | Msa0970930:intron | 25.0% |
| ! | CTGTTAGAAAAATATTTGTG+AGG | + | chr6_4:2590697-2590716 | Msa0970930:intron | 25.0% |
| !! | TGTCACTTGTTTGTAAAATA+TGG | - | chr6_4:2590754-2590773 | None:intergenic | 25.0% |
| ! | ATATGTTTGTGCATAAAGAA+AGG | + | chr6_4:2590805-2590824 | Msa0970930:intron | 25.0% |
| ! | ATAATATCCTCAATTGACAA+AGG | - | chr6_4:2591467-2591486 | None:intergenic | 25.0% |
| ! | AATAACAGATTCAGAAAACA+GGG | - | chr6_4:2591654-2591673 | None:intergenic | 25.0% |
| !!! | TTTTTCATTTTTATCCAGCT+TGG | - | chr6_4:2591702-2591721 | None:intergenic | 25.0% |
| !! | ACTGGATTTTTCTAATAAGT+TGG | + | chr6_4:2591724-2591743 | Msa0970930:CDS | 25.0% |
| ! | TTGAAATGATTAAACATGGT+GGG | - | chr6_4:2591840-2591859 | None:intergenic | 25.0% |
| ! | ATTGAAATGATTAAACATGG+TGG | - | chr6_4:2591841-2591860 | None:intergenic | 25.0% |
| !! | AATTTCTGGACAAAAATGAA+CGG | - | chr6_4:2592005-2592024 | None:intergenic | 25.0% |
| ! | TGAAATTAATGCTAGAATGA+AGG | - | chr6_4:2592101-2592120 | None:intergenic | 25.0% |
| !!! | ATGTCTAATTGTTTTGACAT+TGG | + | chr6_4:2592296-2592315 | Msa0970930:intron | 25.0% |
| ! | AAATCAAAATCAATACTGCA+TGG | - | chr6_4:2592859-2592878 | None:intergenic | 25.0% |
| TCATCAAAGAGAGAATAAGA+AGG | + | chr6_4:2585154-2585173 | Msa0970930:five_prime_UTR | 30.0% | |
| TTATTGAAGGAAAGAGAGAT+CGG | - | chr6_4:2585330-2585349 | None:intergenic | 30.0% | |
| ATTGCGATTGTGATTATTGA+AGG | - | chr6_4:2585343-2585362 | None:intergenic | 30.0% | |
| GATTATATGGAAGATGATCA+AGG | + | chr6_4:2585552-2585571 | Msa0970930:CDS | 30.0% | |
| ! | TTGTGGTTTTCTATATGCTA+AGG | + | chr6_4:2585630-2585649 | Msa0970930:intron | 30.0% |
| AGTGATAAACTATAAGCTCA+TGG | + | chr6_4:2585774-2585793 | Msa0970930:intron | 30.0% | |
| ATAAACATGCCTTCAATTCA+AGG | + | chr6_4:2586172-2586191 | Msa0970930:intron | 30.0% | |
| ATAAGCTGTTTATCAAGACA+GGG | - | chr6_4:2586223-2586242 | None:intergenic | 30.0% | |
| TATAAGCTGTTTATCAAGAC+AGG | - | chr6_4:2586224-2586243 | None:intergenic | 30.0% | |
| !! | GCTATAAGTTGTTTTCCATA+AGG | + | chr6_4:2586332-2586351 | Msa0970930:intron | 30.0% |
| TAGTTCTCGAATATACCTTA+TGG | - | chr6_4:2586350-2586369 | None:intergenic | 30.0% | |
| !! | ATAAACACTTTGAGACTGTT+TGG | - | chr6_4:2586672-2586691 | None:intergenic | 30.0% |
| !!! | GCTTTTTTGAGCTTATCTAT+TGG | - | chr6_4:2586696-2586715 | None:intergenic | 30.0% |
| !!! | CATAAAGTATTTTGATCTGG+GGG | + | chr6_4:2586824-2586843 | Msa0970930:CDS | 30.0% |
| ! | AGTGAGTGATTTTCAATGAA+TGG | + | chr6_4:2586907-2586926 | Msa0970930:intron | 30.0% |
| CTTTGCTGAGAAAGTTAAAT+TGG | + | chr6_4:2587002-2587021 | Msa0970930:intron | 30.0% | |
| ! | TTAAATTGGAAGGTGCAATT+AGG | + | chr6_4:2587016-2587035 | Msa0970930:CDS | 30.0% |
| CTTTCATGAAACTAACTAAG+TGG | - | chr6_4:2587127-2587146 | None:intergenic | 30.0% | |
| ACACAAACTAATTGCTTACT+GGG | + | chr6_4:2587156-2587175 | Msa0970930:intron | 30.0% | |
| ! | CACCTTATTAGATTTTCTTC+AGG | + | chr6_4:2587198-2587217 | Msa0970930:intron | 30.0% |
| ACCCTGAAGAAAATCTAATA+AGG | - | chr6_4:2587203-2587222 | None:intergenic | 30.0% | |
| ! | TTCAGTTTGTTTAGACCTTT+AGG | + | chr6_4:2587252-2587271 | Msa0970930:intron | 30.0% |
| ! | TCAGTTTGTTTAGACCTTTA+GGG | + | chr6_4:2587253-2587272 | Msa0970930:intron | 30.0% |
| ! | CTTTTACCATTTACGAAAAG+AGG | + | chr6_4:2587357-2587376 | Msa0970930:intron | 30.0% |
| TTTACCATTTACGAAAAGAG+GGG | + | chr6_4:2587359-2587378 | Msa0970930:intron | 30.0% | |
| !!! | AACACTGCCACATTTTTTTT+AGG | - | chr6_4:2587386-2587405 | None:intergenic | 30.0% |
| TCCCTGCTTGTAATTTAATT+TGG | + | chr6_4:2587467-2587486 | Msa0970930:intron | 30.0% | |
| GCCAAATTAAATTACAAGCA+GGG | - | chr6_4:2587471-2587490 | None:intergenic | 30.0% | |
| TGCCAAATTAAATTACAAGC+AGG | - | chr6_4:2587472-2587491 | None:intergenic | 30.0% | |
| ! | TAGAGCATCAAATACTTAAG+AGG | - | chr6_4:2587512-2587531 | None:intergenic | 30.0% |
| TCTACCAATGTTTGTTTCAT+GGG | + | chr6_4:2587528-2587547 | Msa0970930:intron | 30.0% | |
| AAATCCCATGAAACAAACAT+TGG | - | chr6_4:2587535-2587554 | None:intergenic | 30.0% | |
| TTTGTCTTACATGCTTGTAT+TGG | + | chr6_4:2587552-2587571 | Msa0970930:intron | 30.0% | |
| TTGTCTTACATGCTTGTATT+GGG | + | chr6_4:2587553-2587572 | Msa0970930:intron | 30.0% | |
| GTGAAAACAAGGTAAAATTG+CGG | - | chr6_4:2587593-2587612 | None:intergenic | 30.0% | |
| TTGAAACTTCTATTTGCTTC+AGG | + | chr6_4:2587725-2587744 | Msa0970930:intron | 30.0% | |
| ! | TCGTACTAAATAGAGTATCA+CGG | - | chr6_4:2587875-2587894 | None:intergenic | 30.0% |
| AAAACATTCTACATAGTGCA+TGG | + | chr6_4:2588064-2588083 | Msa0970930:intron | 30.0% | |
| CAAATTAAGATCATGAGCTA+GGG | - | chr6_4:2588098-2588117 | None:intergenic | 30.0% | |
| ACAAATTAAGATCATGAGCT+AGG | - | chr6_4:2588099-2588118 | None:intergenic | 30.0% | |
| ATGTTCCTTATTGTTCCATT+GGG | - | chr6_4:2588221-2588240 | None:intergenic | 30.0% | |
| AATGTTCCTTATTGTTCCAT+TGG | - | chr6_4:2588222-2588241 | None:intergenic | 30.0% | |
| ! | AAGAGATATTAGTCTGCATA+TGG | + | chr6_4:2588381-2588400 | Msa0970930:intron | 30.0% |
| !!! | CGTTTTGTTTATTTTTCTCG+CGG | + | chr6_4:2588423-2588442 | Msa0970930:intron | 30.0% |
| !!! | GTTTTGTTTATTTTTCTCGC+GGG | + | chr6_4:2588424-2588443 | Msa0970930:intron | 30.0% |
| !! | CGGTAGTACGAATTTTATTT+CGG | - | chr6_4:2588514-2588533 | None:intergenic | 30.0% |
| ATAAGATAGATGACAGAAGA+TGG | + | chr6_4:2588894-2588913 | Msa0970930:intron | 30.0% | |
| AAAGTTGGCAATAAGTCAAA+TGG | - | chr6_4:2588951-2588970 | None:intergenic | 30.0% | |
| ! | TTAATTTGAACATGGATGAG+GGG | + | chr6_4:2588986-2589005 | Msa0970930:intron | 30.0% |
| AACCTGAATTAATTGAGCTT+TGG | + | chr6_4:2589127-2589146 | Msa0970930:intron | 30.0% | |
| AACCAAAGCTCAATTAATTC+AGG | - | chr6_4:2589132-2589151 | None:intergenic | 30.0% | |
| CATTTCTAAATTTCTCTTGG+TGG | + | chr6_4:2589187-2589206 | Msa0970930:intron | 30.0% | |
| GACATTACCAGAAATAATTC+TGG | - | chr6_4:2589272-2589291 | None:intergenic | 30.0% | |
| !! | AAATACTGAAGAGTACCATT+TGG | + | chr6_4:2589336-2589355 | Msa0970930:intron | 30.0% |
| TGGAAGAAACCAATTTGTAT+TGG | + | chr6_4:2589382-2589401 | Msa0970930:CDS | 30.0% | |
| ! | AGAAACCAATTTGTATTGGT+AGG | + | chr6_4:2589386-2589405 | Msa0970930:CDS | 30.0% |
| TGCTATGTATAATGTTGATG+AGG | + | chr6_4:2589665-2589684 | Msa0970930:CDS | 30.0% | |
| !! | CAAGTGTTGAACATTTAGTT+AGG | - | chr6_4:2589720-2589739 | None:intergenic | 30.0% |
| AGTTTGAAGAACACTCAATA+TGG | + | chr6_4:2590061-2590080 | Msa0970930:CDS | 30.0% | |
| GCATTACATATACACATTGA+TGG | + | chr6_4:2590128-2590147 | Msa0970930:intron | 30.0% | |
| ! | GCATGATGATTGTATGATTT+TGG | + | chr6_4:2590319-2590338 | Msa0970930:intron | 30.0% |
| GTCATAAAAAACAATGGCTA+GGG | - | chr6_4:2590355-2590374 | None:intergenic | 30.0% | |
| AGTCATAAAAAACAATGGCT+AGG | - | chr6_4:2590356-2590375 | None:intergenic | 30.0% | |
| !!! | TAGCCATTGTTTTTTATGAC+TGG | + | chr6_4:2590355-2590374 | Msa0970930:intron | 30.0% |
| AAAAAATTGACCACTTTCCA+TGG | - | chr6_4:2590405-2590424 | None:intergenic | 30.0% | |
| TATAATGCCTTTCTCTGTAT+TGG | - | chr6_4:2590428-2590447 | None:intergenic | 30.0% | |
| TTATGCACAAACATATACCA+AGG | - | chr6_4:2590801-2590820 | None:intergenic | 30.0% | |
| !!! | CATTTGTCCTTGTTTTTGAT+TGG | + | chr6_4:2590899-2590918 | Msa0970930:intron | 30.0% |
| GTAACAACCAATCAAAAACA+AGG | - | chr6_4:2590909-2590928 | None:intergenic | 30.0% | |
| ! | CATTTTCGGTTTCATCAAAA+GGG | + | chr6_4:2591317-2591336 | Msa0970930:CDS | 30.0% |
| GTATTGCTTCAATATTTGCA+TGG | + | chr6_4:2591360-2591379 | Msa0970930:CDS | 30.0% | |
| ! | AACTTTTCCTTTGTCAATTG+AGG | + | chr6_4:2591457-2591476 | Msa0970930:intron | 30.0% |
| GAAGATCACTTCTTAATCTA+TGG | - | chr6_4:2591585-2591604 | None:intergenic | 30.0% | |
| CAATAACAGATTCAGAAAAC+AGG | - | chr6_4:2591655-2591674 | None:intergenic | 30.0% | |
| !! | GGATTTTTCTAATAAGTTGG+AGG | + | chr6_4:2591727-2591746 | Msa0970930:CDS | 30.0% |
| TGAAATGATTAAACATGGTG+GGG | - | chr6_4:2591839-2591858 | None:intergenic | 30.0% | |
| CATGATATGTCTGTTTATAG+TGG | + | chr6_4:2592121-2592140 | Msa0970930:intron | 30.0% | |
| ! | GTTTATAGTGGAAGTTAAAC+TGG | + | chr6_4:2592133-2592152 | Msa0970930:intron | 30.0% |
| AATGCTTTCCTAACATTCTA+GGG | - | chr6_4:2592470-2592489 | None:intergenic | 30.0% | |
| AAAAACAGACACTAAGAATG+GGG | - | chr6_4:2592556-2592575 | None:intergenic | 30.0% | |
| CAAAAACAGACACTAAGAAT+GGG | - | chr6_4:2592557-2592576 | None:intergenic | 30.0% | |
| ACAAAAACAGACACTAAGAA+TGG | - | chr6_4:2592558-2592577 | None:intergenic | 30.0% | |
| !!! | ATTCTTAGTGTCTGTTTTTG+TGG | + | chr6_4:2592557-2592576 | Msa0970930:three_prime_UTR | 30.0% |
| GTAGAAGTTTATCCAAACAT+AGG | + | chr6_4:2592626-2592645 | Msa0970930:three_prime_UTR | 30.0% | |
| TTGTGAAAAAAAAACTGGAG+TGG | + | chr6_4:2592812-2592831 | Msa0970930:three_prime_UTR | 30.0% | |
| ! | TTGATGATTTAGTGCATGTT+TGG | + | chr6_4:2592877-2592896 | Msa0970930:three_prime_UTR | 30.0% |
| AATGGAAGAGAAGGTTGTTA+GGG | - | chr6_4:2585266-2585285 | None:intergenic | 35.0% | |
| ATGATGAAGAAGGAGTTGAA+TGG | - | chr6_4:2585284-2585303 | None:intergenic | 35.0% | |
| !! | ATTGGATTAGCGACATGAAT+GGG | - | chr6_4:2585411-2585430 | None:intergenic | 35.0% |
| TCTTAGGTGATGAAATGACA+AGG | + | chr6_4:2585530-2585549 | Msa0970930:intron | 35.0% | |
| ATGGAAGATGATCAAGGATA+AGG | + | chr6_4:2585558-2585577 | Msa0970930:CDS | 35.0% | |
| GACACTCATAAGAAAACGAA+AGG | + | chr6_4:2585674-2585693 | Msa0970930:intron | 35.0% | |
| GCTCTGTTTGGTAAAATTAG+CGG | + | chr6_4:2585696-2585715 | Msa0970930:intron | 35.0% | |
| TTAAGATTGCAGGGGTAAAA+TGG | + | chr6_4:2585743-2585762 | Msa0970930:intron | 35.0% | |
| ! | ATTGAAGGCATGTTTATCGT+TGG | - | chr6_4:2586169-2586188 | None:intergenic | 35.0% |
| ACAATGACACCTTGAATTGA+AGG | - | chr6_4:2586184-2586203 | None:intergenic | 35.0% | |
| ! | GTTTTCATAAGCTATCTTGG+AGG | + | chr6_4:2586584-2586603 | Msa0970930:intron | 35.0% |
| GCAAATTGCAAATAGTCTAC+TGG | - | chr6_4:2586732-2586751 | None:intergenic | 35.0% | |
| AAGTAAGGAAAGATAAGCTG+CGG | - | chr6_4:2586795-2586814 | None:intergenic | 35.0% | |
| GCTGAGAAAGTTAAATTGGA+AGG | + | chr6_4:2587006-2587025 | Msa0970930:intron | 35.0% | |
| ACTAACTAAGTGGCATTACT+TGG | - | chr6_4:2587117-2587136 | None:intergenic | 35.0% | |
| GACACAAACTAATTGCTTAC+TGG | + | chr6_4:2587155-2587174 | Msa0970930:intron | 35.0% | |
| ATAAGGTGAAAAACCCTAAC+AGG | - | chr6_4:2587186-2587205 | None:intergenic | 35.0% | |
| AACAGACATAAAGCTTGTCA+AGG | - | chr6_4:2587280-2587299 | None:intergenic | 35.0% | |
| ! | CTACTTAAGCTGCATTTTTG+TGG | + | chr6_4:2587304-2587323 | Msa0970930:intron | 35.0% |
| ACTACAACAAAATGTGCCAA+CGG | - | chr6_4:2587422-2587441 | None:intergenic | 35.0% | |
| CTCTACCAATGTTTGTTTCA+TGG | + | chr6_4:2587527-2587546 | Msa0970930:intron | 35.0% | |
| TCAGTCCAAATTCTTTGACT+CGG | - | chr6_4:2588181-2588200 | None:intergenic | 35.0% | |
| AATTTGGACTGAAGTCTATG+TGG | + | chr6_4:2588189-2588208 | Msa0970930:CDS | 35.0% | |
| TGTTCCTTATTGTTCCATTG+GGG | - | chr6_4:2588220-2588239 | None:intergenic | 35.0% | |
| TAAACAAAACGACACACACA+GGG | - | chr6_4:2588414-2588433 | None:intergenic | 35.0% | |
| ATAAACAAAACGACACACAC+AGG | - | chr6_4:2588415-2588434 | None:intergenic | 35.0% | |
| ! | ACTTGGCTATCAATTAGCTT+GGG | - | chr6_4:2588575-2588594 | None:intergenic | 35.0% |
| TACTTGGCTATCAATTAGCT+TGG | - | chr6_4:2588576-2588595 | None:intergenic | 35.0% | |
| ACTAACTAAGTGGCATTACT+TGG | - | chr6_4:2587117-2587136 | None:intergenic | 35.0% | |
| AATGTCAGTCAAGGGAAAAA+AGG | + | chr6_4:2588788-2588807 | Msa0970930:intron | 35.0% | |
| ATGTCAGTCAAGGGAAAAAA+GGG | + | chr6_4:2588789-2588808 | Msa0970930:intron | 35.0% | |
| AAATCCCAATTGAAGAGTCA+GGG | + | chr6_4:2588812-2588831 | Msa0970930:intron | 35.0% | |
| AAAACCCTGACTCTTCAATT+GGG | - | chr6_4:2588819-2588838 | None:intergenic | 35.0% | |
| TAAAACCCTGACTCTTCAAT+TGG | - | chr6_4:2588820-2588839 | None:intergenic | 35.0% | |
| GCGGGATATTGAATTTATTC+CGG | + | chr6_4:2589013-2589032 | Msa0970930:intron | 35.0% | |
| GTAGTATATTGAGATCGCAT+GGG | - | chr6_4:2589078-2589097 | None:intergenic | 35.0% | |
| GGTATATTGCGGCATATTAT+GGG | - | chr6_4:2589250-2589269 | None:intergenic | 35.0% | |
| ! | TCCATTGATTACTGTATCAG+TGG | - | chr6_4:2589437-2589456 | None:intergenic | 35.0% |
| ATACAGTAATCAATGGACCA+GGG | + | chr6_4:2589440-2589459 | Msa0970930:CDS | 35.0% | |
| TACATCAGAAAGCAGGTATT+CGG | - | chr6_4:2589497-2589516 | None:intergenic | 35.0% | |
| TTTCAACTACATCAGAAAGC+AGG | - | chr6_4:2589504-2589523 | None:intergenic | 35.0% | |
| ! | TTTTGTAAATGCCAGTGACA+TGG | - | chr6_4:2589819-2589838 | None:intergenic | 35.0% |
| CACTGGCATTTACAAAAAAG+TGG | + | chr6_4:2589822-2589841 | Msa0970930:CDS | 35.0% | |
| !!! | TTTTTGGTGCTCAAGTAAAG+TGG | - | chr6_4:2589848-2589867 | None:intergenic | 35.0% |
| TTCTCAAGAAATATGATGGC+AGG | + | chr6_4:2589873-2589892 | Msa0970930:CDS | 35.0% | |
| ! | AAGAGAAGTTTTGCATACGA+AGG | - | chr6_4:2589944-2589963 | None:intergenic | 35.0% |
| TTTAATTCAGACAGCGTTTC+AGG | + | chr6_4:2589962-2589981 | Msa0970930:intron | 35.0% | |
| TTCAGGAGGTTTATGAAGAA+AGG | + | chr6_4:2590028-2590047 | Msa0970930:CDS | 35.0% | |
| CAAAGTGATTTACTTGCTCA+AGG | + | chr6_4:2590266-2590285 | Msa0970930:CDS | 35.0% | |
| GTGTGCTCTGTTTATTATAG+AGG | + | chr6_4:2590526-2590545 | Msa0970930:intron | 35.0% | |
| ATATGGCACTTGAAACACTT+AGG | - | chr6_4:2590737-2590756 | None:intergenic | 35.0% | |
| ! | CTTTTGCATTACGTTTACCT+TGG | + | chr6_4:2590781-2590800 | Msa0970930:intron | 35.0% |
| ACACTTAACAGAAAGTTGCA+AGG | + | chr6_4:2590867-2590886 | Msa0970930:intron | 35.0% | |
| CCAGAAAAGACACATTGAAA+GGG | - | chr6_4:2590982-2591001 | None:intergenic | 35.0% | |
| ACCAGAAAAGACACATTGAA+AGG | - | chr6_4:2590983-2591002 | None:intergenic | 35.0% | |
| AATTTGCAGTTATCTTCCGA+CGG | + | chr6_4:2591251-2591270 | Msa0970930:intron | 35.0% | |
| ! | GCATTTTCGGTTTCATCAAA+AGG | + | chr6_4:2591316-2591335 | Msa0970930:CDS | 35.0% |
| CATCTACATCAACTTTGACA+AGG | - | chr6_4:2591500-2591519 | None:intergenic | 35.0% | |
| GGAAGGATATTCACTTACTT+AGG | - | chr6_4:2591818-2591837 | None:intergenic | 35.0% | |
| TTACTATTTCATGACGTGTC+TGG | + | chr6_4:2591961-2591980 | Msa0970930:intron | 35.0% | |
| CTTTAGCCTGTTATTAAGCT+CGG | + | chr6_4:2592217-2592236 | Msa0970930:intron | 35.0% | |
| TTTAGCCTGTTATTAAGCTC+GGG | + | chr6_4:2592218-2592237 | Msa0970930:intron | 35.0% | |
| ! | TTTTGACATTGGATTTGTGC+AGG | + | chr6_4:2592307-2592326 | Msa0970930:intron | 35.0% |
| TTTGACATTGGATTTGTGCA+GGG | + | chr6_4:2592308-2592327 | Msa0970930:intron | 35.0% | |
| CAATGCTTTCCTAACATTCT+AGG | - | chr6_4:2592471-2592490 | None:intergenic | 35.0% | |
| !! | TTAGGAAAGCATTGAACAGA+GGG | + | chr6_4:2592477-2592496 | Msa0970930:three_prime_UTR | 35.0% |
| CCAAAGTCCCAAAGAATAAT+TGG | - | chr6_4:2592520-2592539 | None:intergenic | 35.0% | |
| !! | CCAATTATTCTTTGGGACTT+TGG | + | chr6_4:2592517-2592536 | Msa0970930:three_prime_UTR | 35.0% |
| AAATCACAGCCAACGTATAT+CGG | + | chr6_4:2592595-2592614 | Msa0970930:three_prime_UTR | 35.0% | |
| ACAAATACAAATTGCACACG+AGG | + | chr6_4:2592722-2592741 | Msa0970930:three_prime_UTR | 35.0% | |
| CAAATACAAATTGCACACGA+GGG | + | chr6_4:2592723-2592742 | Msa0970930:three_prime_UTR | 35.0% | |
| GAATGGAAGAGAAGGTTGTT+AGG | - | chr6_4:2585267-2585286 | None:intergenic | 40.0% | |
| AAGGAGTTGAATGGAAGAGA+AGG | - | chr6_4:2585275-2585294 | None:intergenic | 40.0% | |
| ! | AGGAAGAGTGATGATGAAGA+AGG | - | chr6_4:2585294-2585313 | None:intergenic | 40.0% |
| !! | GATTGGATTAGCGACATGAA+TGG | - | chr6_4:2585412-2585431 | None:intergenic | 40.0% |
| AATCCAATCGTCGAAATGGA+CGG | + | chr6_4:2585423-2585442 | Msa0970930:CDS | 40.0% | |
| ! | GAATTACGAAGAGTGTGAGA+TGG | - | chr6_4:2585470-2585489 | None:intergenic | 40.0% |
| AGAAAACGAAAGGCTCTGTT+TGG | + | chr6_4:2585684-2585703 | Msa0970930:intron | 40.0% | |
| TCATTGTGTCAGTGCTACAT+AGG | + | chr6_4:2586197-2586216 | Msa0970930:intron | 40.0% | |
| ! | GTCTACTGGCCTATTTAGAT+TGG | - | chr6_4:2586718-2586737 | None:intergenic | 40.0% |
| GCAGCTTATCTTTCCTTACT+TGG | + | chr6_4:2586794-2586813 | Msa0970930:intron | 40.0% | |
| GAAAATCACTCACTTGAGAG+TGG | - | chr6_4:2586901-2586920 | None:intergenic | 40.0% | |
| GAGGGGACCTAAAAAAAATG+TGG | + | chr6_4:2587376-2587395 | Msa0970930:intron | 40.0% | |
| !! | GTTGGCACATTTTGTTGTAG+TGG | + | chr6_4:2587421-2587440 | Msa0970930:intron | 40.0% |
| AAATGTGCAACCATAACTCC+CGG | + | chr6_4:2587763-2587782 | Msa0970930:intron | 40.0% | |
| TAAAGCCCAGAACAACTTAC+CGG | - | chr6_4:2587785-2587804 | None:intergenic | 40.0% | |
| GTGCTATAACACTAGCATAG+CGG | + | chr6_4:2587826-2587845 | Msa0970930:intron | 40.0% | |
| CAGTCCAAATTCTTTGACTC+GGG | - | chr6_4:2588180-2588199 | None:intergenic | 40.0% | |
| !!! | TTCCCACACGTGTTTTTTTG+TGG | + | chr6_4:2588331-2588350 | Msa0970930:intron | 40.0% |
| !!! | TCCCACACGTGTTTTTTTGT+GGG | + | chr6_4:2588332-2588351 | Msa0970930:intron | 40.0% |
| ACCCACAAAAAAACACGTGT+GGG | - | chr6_4:2588336-2588355 | None:intergenic | 40.0% | |
| ! | TTGGCTATCAATTAGCTTGG+GGG | - | chr6_4:2588573-2588592 | None:intergenic | 40.0% |
| ! | CTTGGCTATCAATTAGCTTG+GGG | - | chr6_4:2588574-2588593 | None:intergenic | 40.0% |
| GGCACAAACTAATTGCTTAC+CGG | + | chr6_4:2588630-2588649 | Msa0970930:intron | 40.0% | |
| GCACAAACTAATTGCTTACC+GGG | + | chr6_4:2588631-2588650 | Msa0970930:intron | 40.0% | |
| CACAAACTAATTGCTTACCG+GGG | + | chr6_4:2588632-2588651 | Msa0970930:intron | 40.0% | |
| ACAAACTAATTGCTTACCGG+GGG | + | chr6_4:2588633-2588652 | Msa0970930:intron | 40.0% | |
| TCGGTTTACAATGTCAGTCA+AGG | + | chr6_4:2588779-2588798 | Msa0970930:intron | 40.0% | |
| CGGTTTACAATGTCAGTCAA+GGG | + | chr6_4:2588780-2588799 | Msa0970930:intron | 40.0% | |
| GAAATCCCAATTGAAGAGTC+AGG | + | chr6_4:2588811-2588830 | Msa0970930:intron | 40.0% | |
| TGACTTATTGCCAACTTTGC+TGG | + | chr6_4:2588953-2588972 | Msa0970930:intron | 40.0% | |
| ! | TTTTGAATGGCCAGCAAAGT+TGG | - | chr6_4:2588966-2588985 | None:intergenic | 40.0% |
| CGTAGTATATTGAGATCGCA+TGG | - | chr6_4:2589079-2589098 | None:intergenic | 40.0% | |
| GGGTATATTGCGGCATATTA+TGG | - | chr6_4:2589251-2589270 | None:intergenic | 40.0% | |
| GCATGCCTACCAATACAAAT+TGG | - | chr6_4:2589394-2589413 | None:intergenic | 40.0% | |
| !! | TGTATTGGTAGGCATGCTTT+TGG | + | chr6_4:2589397-2589416 | Msa0970930:CDS | 40.0% |
| GCCACTGATACAGTAATCAA+TGG | + | chr6_4:2589433-2589452 | Msa0970930:CDS | 40.0% | |
| GATACAGTAATCAATGGACC+AGG | + | chr6_4:2589439-2589458 | Msa0970930:CDS | 40.0% | |
| TCTAATTCAGTCCCAGAAGA+CGG | + | chr6_4:2589588-2589607 | Msa0970930:intron | 40.0% | |
| TTATGAACATCAAGCTCCAC+TGG | - | chr6_4:2589621-2589640 | None:intergenic | 40.0% | |
| GTTCATAATTTCAAAGGCCC+TGG | + | chr6_4:2589633-2589652 | Msa0970930:CDS | 40.0% | |
| CTCGAATTGACTGGCATATT+AGG | - | chr6_4:2589781-2589800 | None:intergenic | 40.0% | |
| AGGAGGTTTATGAAGAAAGG+TGG | + | chr6_4:2590031-2590050 | Msa0970930:CDS | 40.0% | |
| AGGTTTATGAAGAAAGGTGG+CGG | + | chr6_4:2590034-2590053 | Msa0970930:CDS | 40.0% | |
| GTTGACACTTGAGTAACTTC+AGG | + | chr6_4:2590150-2590169 | Msa0970930:intron | 40.0% | |
| ! | GCATAGGCTAATTGATGACA+TGG | + | chr6_4:2590178-2590197 | Msa0970930:CDS | 40.0% |
| ! | TAGGCTAATTGATGACATGG+TGG | + | chr6_4:2590181-2590200 | Msa0970930:CDS | 40.0% |
| GCATATGCACTCAAAAGTGA+AGG | + | chr6_4:2590203-2590222 | Msa0970930:CDS | 40.0% | |
| TATGCACTCAAAAGTGAAGG+TGG | + | chr6_4:2590206-2590225 | Msa0970930:CDS | 40.0% | |
| ATGCACTCAAAAGTGAAGGT+GGG | + | chr6_4:2590207-2590226 | Msa0970930:CDS | 40.0% | |
| TGGGCTTGCAAGAATTATGA+TGG | + | chr6_4:2590236-2590255 | Msa0970930:CDS | 40.0% | |
| GACTGGTAAGATCCAATTCT+TGG | + | chr6_4:2590372-2590391 | Msa0970930:intron | 40.0% | |
| ATATCCTTGTCCAAGCGATT+TGG | + | chr6_4:2590445-2590464 | Msa0970930:intron | 40.0% | |
| ATAAACAGAGCACACTCATC+TGG | - | chr6_4:2590521-2590540 | None:intergenic | 40.0% | |
| TAACAGAAAGTTGCAAGGCA+AGG | + | chr6_4:2590872-2590891 | Msa0970930:intron | 40.0% | |
| AACAGAAAGTTGCAAGGCAA+GGG | + | chr6_4:2590873-2590892 | Msa0970930:intron | 40.0% | |
| ! | CCCTTTCAATGTGTCTTTTC+TGG | + | chr6_4:2590979-2590998 | Msa0970930:intron | 40.0% |
| !! | TCAATGTGTCTTTTCTGGTG+TGG | + | chr6_4:2590984-2591003 | Msa0970930:intron | 40.0% |
| ! | TCTGAAATCTGAATGTGTGC+AGG | + | chr6_4:2591087-2591106 | Msa0970930:intron | 40.0% |
| ATCTGAATGTGTGCAGGATT+CGG | + | chr6_4:2591093-2591112 | Msa0970930:intron | 40.0% | |
| ! | GAACTGTAACTCGGCATTTT+CGG | + | chr6_4:2591303-2591322 | Msa0970930:CDS | 40.0% |
| TGAAGCAATACTGTTCGTAC+TGG | - | chr6_4:2591351-2591370 | None:intergenic | 40.0% | |
| TCAATATTTGCATGGACACG+AGG | + | chr6_4:2591368-2591387 | Msa0970930:CDS | 40.0% | |
| GAAAACAGGGAGAAGAAGAA+AGG | - | chr6_4:2591641-2591660 | None:intergenic | 40.0% | |
| ! | ATTTTTATCCAGCTTGGCTC+TGG | - | chr6_4:2591696-2591715 | None:intergenic | 40.0% |
| AATCAGAAGGGCAAGATCTT+TGG | - | chr6_4:2591789-2591808 | None:intergenic | 40.0% | |
| ATCTTGCCCTTCTGATTCAT+GGG | + | chr6_4:2591792-2591811 | Msa0970930:CDS | 40.0% | |
| ! | ATGATTAAACATGGTGGGGA+AGG | - | chr6_4:2591835-2591854 | None:intergenic | 40.0% |
| CGAAGCAGGATACAAGAATT+AGG | - | chr6_4:2591918-2591937 | None:intergenic | 40.0% | |
| ACGAATAATTGCTTCGAAGC+AGG | - | chr6_4:2591932-2591951 | None:intergenic | 40.0% | |
| !! | GTGGAAGTTAAACTGGTTTG+TGG | + | chr6_4:2592140-2592159 | Msa0970930:intron | 40.0% |
| GGTGTTCAAGTAATATTCCC+TGG | - | chr6_4:2592337-2592356 | None:intergenic | 40.0% | |
| GGAATATTACTTGAACACCG+AGG | + | chr6_4:2592338-2592357 | Msa0970930:CDS | 40.0% | |
| !! | CACAGCATCGATAAATTCCT+CGG | - | chr6_4:2592358-2592377 | None:intergenic | 40.0% |
| CATACATGTTAGACTGTTGC+AGG | - | chr6_4:2592411-2592430 | None:intergenic | 40.0% | |
| CTGCAACAGTCTAACATGTA+TGG | + | chr6_4:2592409-2592428 | Msa0970930:exon | 40.0% | |
| AATCCTAGCCCTAGAATGTT+AGG | + | chr6_4:2592459-2592478 | Msa0970930:three_prime_UTR | 40.0% | |
| !! | TTTCCTAACATTCTAGGGCT+AGG | - | chr6_4:2592465-2592484 | None:intergenic | 40.0% |
| !! | GTTAGGAAAGCATTGAACAG+AGG | + | chr6_4:2592476-2592495 | Msa0970930:three_prime_UTR | 40.0% |
| !! | TAGGAAAGCATTGAACAGAG+GGG | + | chr6_4:2592478-2592497 | Msa0970930:three_prime_UTR | 40.0% |
| AATCACAGCCAACGTATATC+GGG | + | chr6_4:2592596-2592615 | Msa0970930:three_prime_UTR | 40.0% | |
| ! | CAGTAGTGTTAGCCTATGTT+TGG | - | chr6_4:2592641-2592660 | None:intergenic | 40.0% |
| ! | AGATAGCATTGTGAGAGTGC+TGG | - | chr6_4:2585226-2585245 | None:intergenic | 45.0% |
| !! | AGAAGAAGCGAAGCATCGAA+GGG | - | chr6_4:2585379-2585398 | None:intergenic | 45.0% |
| !! | AAGAAGAAGCGAAGCATCGA+AGG | - | chr6_4:2585380-2585399 | None:intergenic | 45.0% |
| CGCTAATCCAATCGTCGAAA+TGG | + | chr6_4:2585419-2585438 | Msa0970930:CDS | 45.0% | |
| TTACCGTCCATTTCGACGAT+TGG | - | chr6_4:2585429-2585448 | None:intergenic | 45.0% | |
| CTTACTGGGAGAACCTGTTA+GGG | + | chr6_4:2587170-2587189 | Msa0970930:intron | 45.0% | |
| AAGCTTGTCAAGGACCCTAA+AGG | - | chr6_4:2587270-2587289 | None:intergenic | 45.0% | |
| ! | AGGTCCCCTCTTTTCGTAAA+TGG | - | chr6_4:2587366-2587385 | None:intergenic | 45.0% |
| GTTTGTATCGTGCAATCCGT+TGG | + | chr6_4:2587403-2587422 | Msa0970930:intron | 45.0% | |
| GCAGGATAAGAAACTCTCCA+AGG | - | chr6_4:2587639-2587658 | None:intergenic | 45.0% | |
| AACGAGGGAATGACAGCAAA+GGG | - | chr6_4:2587663-2587682 | None:intergenic | 45.0% | |
| GAACAACTTACCGGGAGTTA+TGG | - | chr6_4:2587776-2587795 | None:intergenic | 45.0% | |
| TAACTCCCGGTAAGTTGTTC+TGG | + | chr6_4:2587776-2587795 | Msa0970930:intron | 45.0% | |
| AACTCCCGGTAAGTTGTTCT+GGG | + | chr6_4:2587777-2587796 | Msa0970930:intron | 45.0% | |
| AAAGCCCAGAACAACTTACC+GGG | - | chr6_4:2587784-2587803 | None:intergenic | 45.0% | |
| ! | GAACAGACTTCTGTTTTCCG+CGG | + | chr6_4:2587951-2587970 | Msa0970930:intron | 45.0% |
| TCTACATAGTGCATGGCAAG+TGG | + | chr6_4:2588071-2588090 | Msa0970930:intron | 45.0% | |
| CTACATAGTGCATGGCAAGT+GGG | + | chr6_4:2588072-2588091 | Msa0970930:intron | 45.0% | |
| GAGACCCGAGTCAAAGAATT+TGG | + | chr6_4:2588173-2588192 | Msa0970930:CDS | 45.0% | |
| GAAGCCCCAATGGAACAATA+AGG | + | chr6_4:2588213-2588232 | Msa0970930:CDS | 45.0% | |
| CACCCACAAAAAAACACGTG+TGG | - | chr6_4:2588337-2588356 | None:intergenic | 45.0% | |
| AACATGGATGAGGGGAAATG+CGG | + | chr6_4:2588994-2589013 | Msa0970930:intron | 45.0% | |
| GGTTCACGAAATACAGTACC+TGG | - | chr6_4:2589229-2589248 | None:intergenic | 45.0% | |
| AATACCAGCTTAAGCTTCCC+TGG | - | chr6_4:2589460-2589479 | None:intergenic | 45.0% | |
| GGGAAGCTTAAGCTGGTATT+TGG | + | chr6_4:2589460-2589479 | Msa0970930:CDS | 45.0% | |
| ACATAGCAAGAGCTACACCA+GGG | - | chr6_4:2589653-2589672 | None:intergenic | 45.0% | |
| TACATAGCAAGAGCTACACC+AGG | - | chr6_4:2589654-2589673 | None:intergenic | 45.0% | |
| CAGCAAATGCTCGAATTGAC+TGG | - | chr6_4:2589790-2589809 | None:intergenic | 45.0% | |
| TGCTGAATCATCCATGTCAC+TGG | + | chr6_4:2589805-2589824 | Msa0970930:CDS | 45.0% | |
| GTAACTTCAGGTACGAGCAT+AGG | + | chr6_4:2590162-2590181 | Msa0970930:intron | 45.0% | |
| AAAGTGAAGGTGGGTATGTC+TGG | + | chr6_4:2590216-2590235 | Msa0970930:CDS | 45.0% | |
| AAGTGAAGGTGGGTATGTCT+GGG | + | chr6_4:2590217-2590236 | Msa0970930:CDS | 45.0% | |
| TTGACCACTTTCCATGGCTT+GGG | - | chr6_4:2590399-2590418 | None:intergenic | 45.0% | |
| ATTGACCACTTTCCATGGCT+TGG | - | chr6_4:2590400-2590419 | None:intergenic | 45.0% | |
| AAGGGCTAATCGACTACATG+AGG | - | chr6_4:2590964-2590983 | None:intergenic | 45.0% | |
| CAGCTCATGGAACTGTAACT+CGG | + | chr6_4:2591294-2591313 | Msa0970930:CDS | 45.0% | |
| GATCTTGCCCTTCTGATTCA+TGG | + | chr6_4:2591791-2591810 | Msa0970930:CDS | 45.0% | |
| CTTAGGCCCATGAATCAGAA+GGG | - | chr6_4:2591801-2591820 | None:intergenic | 45.0% | |
| ACTTAGGCCCATGAATCAGA+AGG | - | chr6_4:2591802-2591821 | None:intergenic | 45.0% | |
| TGTTATTAAGCTCGGGCAGA+GGG | + | chr6_4:2592225-2592244 | Msa0970930:intron | 45.0% | |
| CGAGGAATTTATCGATGCTG+TGG | + | chr6_4:2592356-2592375 | Msa0970930:CDS | 45.0% | |
| ACACTAAGAATGGGGAAGCA+GGG | - | chr6_4:2592548-2592567 | None:intergenic | 45.0% | |
| AAAAAAACTGGAGTGGCAGC+TGG | + | chr6_4:2592819-2592838 | Msa0970930:three_prime_UTR | 45.0% | |
| AGATCGGTGCATGATGAGGA+AGG | - | chr6_4:2585314-2585333 | None:intergenic | 50.0% | |
| AGAGAGATCGGTGCATGATG+AGG | - | chr6_4:2585318-2585337 | None:intergenic | 50.0% | |
| !! | AAGAAGCGAAGCATCGAAGG+GGG | - | chr6_4:2585377-2585396 | None:intergenic | 50.0% |
| !! | GAAGAAGCGAAGCATCGAAG+GGG | - | chr6_4:2585378-2585397 | None:intergenic | 50.0% |
| ! | CTCGTCAGTGTCGAACTGTT+TGG | + | chr6_4:2586455-2586474 | Msa0970930:intron | 50.0% |
| GCTTACTGGGAGAACCTGTT+AGG | + | chr6_4:2587169-2587188 | Msa0970930:intron | 50.0% | |
| ACGAGGGAATGACAGCAAAG+GGG | - | chr6_4:2587662-2587681 | None:intergenic | 50.0% | |
| GAACGAGGGAATGACAGCAA+AGG | - | chr6_4:2587664-2587683 | None:intergenic | 50.0% | |
| CTGTCAAATAGCAGCTGCAG+TGG | + | chr6_4:2587897-2587916 | Msa0970930:intron | 50.0% | |
| GTGTTGTCAATAGCGAACCG+CGG | - | chr6_4:2587971-2587990 | None:intergenic | 50.0% | |
| TCTATGTGGAGAAGCCCCAA+TGG | + | chr6_4:2588203-2588222 | Msa0970930:CDS | 50.0% | |
| AAAACACCAACAGGTTCCCC+CGG | - | chr6_4:2588652-2588671 | None:intergenic | 50.0% | |
| ACATGGATGAGGGGAAATGC+GGG | + | chr6_4:2588995-2589014 | Msa0970930:intron | 50.0% | |
| ! | CATGGCTTGGGTCCAAGAAT+TGG | - | chr6_4:2590387-2590406 | None:intergenic | 50.0% |
| CAATTCTTGGACCCAAGCCA+TGG | + | chr6_4:2590385-2590404 | Msa0970930:intron | 50.0% | |
| ! | CTTGTCCAAGCGATTTGGCT+CGG | + | chr6_4:2590450-2590469 | Msa0970930:intron | 50.0% |
| GGCTAATCGACTACATGAGG+TGG | - | chr6_4:2590961-2590980 | None:intergenic | 50.0% | |
| TGTGCAGGATTCGGCTCATT+GGG | + | chr6_4:2591102-2591121 | Msa0970930:intron | 50.0% | |
| GGCTTCTAATGTCTTGCCGT+CGG | - | chr6_4:2591270-2591289 | None:intergenic | 50.0% | |
| TACAGTTCCATGAGCTGCCT+CGG | - | chr6_4:2591291-2591310 | None:intergenic | 50.0% | |
| ATTTGCATGGACACGAGGAC+TGG | + | chr6_4:2591373-2591392 | Msa0970930:CDS | 50.0% | |
| GTTATGTACCAGAGCCAAGC+TGG | + | chr6_4:2591685-2591704 | Msa0970930:intron | 50.0% | |
| TGTGTTGAGACAGTGGAGTC+AGG | + | chr6_4:2591755-2591774 | Msa0970930:CDS | 50.0% | |
| CTCTGCCCGAGCTTAATAAC+AGG | - | chr6_4:2592226-2592245 | None:intergenic | 50.0% | |
| CTGTTATTAAGCTCGGGCAG+AGG | + | chr6_4:2592224-2592243 | Msa0970930:intron | 50.0% | |
| GTTAGACTGTTGCAGGCTCT+CGG | - | chr6_4:2592404-2592423 | None:intergenic | 50.0% | |
| CACTAAGAATGGGGAAGCAG+GGG | - | chr6_4:2592547-2592566 | None:intergenic | 50.0% | |
| GACACTAAGAATGGGGAAGC+AGG | - | chr6_4:2592549-2592568 | None:intergenic | 50.0% | |
| CACATCGTCCCGATATACGT+TGG | - | chr6_4:2592607-2592626 | None:intergenic | 50.0% | |
| GGCTAACACTACTGCAGTAG+AGG | + | chr6_4:2592647-2592666 | Msa0970930:three_prime_UTR | 50.0% | |
| CGAGGGAATGACAGCAAAGG+GGG | - | chr6_4:2587661-2587680 | None:intergenic | 55.0% | |
| TGGACCAGGGAAGCTTAAGC+TGG | + | chr6_4:2589453-2589472 | Msa0970930:CDS | 55.0% | |
| TGGACCCAAGCCATGGAAAG+TGG | + | chr6_4:2590392-2590411 | Msa0970930:intron | 55.0% | |
| CGAGCCAAATCGCTTGGACA+AGG | - | chr6_4:2590452-2590471 | None:intergenic | 55.0% | |
| GTGTGCAGGATTCGGCTCAT+TGG | + | chr6_4:2591101-2591120 | Msa0970930:intron | 55.0% | |
| GGGTCTCATGACTTCTGTGC+TGG | + | chr6_4:2591122-2591141 | Msa0970930:CDS | 55.0% | |
| CGGCAAGACATTAGAAGCCG+AGG | + | chr6_4:2591271-2591290 | Msa0970930:CDS | 55.0% | |
| TTAGAAGCCGAGGCAGCTCA+TGG | + | chr6_4:2591281-2591300 | Msa0970930:CDS | 55.0% | |
| GGACACGAGGACTGGAACAT+AGG | + | chr6_4:2591381-2591400 | Msa0970930:CDS | 55.0% | |
| GGCTGCATGTGTTGAGACAG+TGG | + | chr6_4:2591748-2591767 | Msa0970930:CDS | 55.0% | |
| ! | TGGATTTGTGCAGGGTGTCC+AGG | + | chr6_4:2592316-2592335 | Msa0970930:intron | 55.0% |
| ! | GGATTTGTGCAGGGTGTCCA+GGG | + | chr6_4:2592317-2592336 | Msa0970930:intron | 55.0% |
| AACTGGAGTGGCAGCTGGAA+TGG | + | chr6_4:2592824-2592843 | Msa0970930:three_prime_UTR | 55.0% | |
| GGAATGACAGCAAAGGGGGC+AGG | - | chr6_4:2587657-2587676 | None:intergenic | 60.0% | |
| TGCTTACCGGGGGAACCTGT+TGG | + | chr6_4:2588643-2588662 | Msa0970930:intron | 60.0% | |
| !! | TCCAAGCGATTTGGCTCGGC+TGG | + | chr6_4:2590454-2590473 | Msa0970930:intron | 60.0% |
| ACCAGCCGAGCCAAATCGCT+TGG | - | chr6_4:2590458-2590477 | None:intergenic | 60.0% | |
| !! | CTGGAGCGTCGCCGTCTTCT+GGG | - | chr6_4:2589602-2589621 | None:intergenic | 65.0% |
| !! | ACTGGAGCGTCGCCGTCTTC+TGG | - | chr6_4:2589603-2589622 | None:intergenic | 65.0% |
| AGAAGACGGCGACGCTCCAG+TGG | + | chr6_4:2589602-2589621 | Msa0970930:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 2585105 | 2592910 | 2585105 | ID=Msa0970930;Name=Msa0970930 |
| chr6_4 | mRNA | 2585105 | 2592910 | 2585105 | ID=Msa0970930-mRNA-1;Parent=Msa0970930;Name=Msa0970930-mRNA-1;_AED=0.08;_eAED=0.08;_QI=87|0.85|0.93|0.93|1|1|15|488|479 |
| chr6_4 | exon | 2585105 | 2585444 | 2585105 | ID=Msa0970930-mRNA-1:exon:1277;Parent=Msa0970930-mRNA-1 |
| chr6_4 | exon | 2585536 | 2585579 | 2585536 | ID=Msa0970930-mRNA-1:exon:1278;Parent=Msa0970930-mRNA-1 |
| chr6_4 | exon | 2586798 | 2586907 | 2586798 | ID=Msa0970930-mRNA-1:exon:1279;Parent=Msa0970930-mRNA-1 |
| chr6_4 | exon | 2587012 | 2587037 | 2587012 | ID=Msa0970930-mRNA-1:exon:1280;Parent=Msa0970930-mRNA-1 |
| chr6_4 | exon | 2588171 | 2588248 | 2588171 | ID=Msa0970930-mRNA-1:exon:1281;Parent=Msa0970930-mRNA-1 |
| chr6_4 | exon | 2589230 | 2589283 | 2589230 | ID=Msa0970930-mRNA-1:exon:1282;Parent=Msa0970930-mRNA-1 |
| chr6_4 | exon | 2589380 | 2589481 | 2589380 | ID=Msa0970930-mRNA-1:exon:1283;Parent=Msa0970930-mRNA-1 |
| chr6_4 | exon | 2589598 | 2589686 | 2589598 | ID=Msa0970930-mRNA-1:exon:1284;Parent=Msa0970930-mRNA-1 |
| chr6_4 | exon | 2589791 | 2589894 | 2589791 | ID=Msa0970930-mRNA-1:exon:1285;Parent=Msa0970930-mRNA-1 |
| chr6_4 | exon | 2590014 | 2590082 | 2590014 | ID=Msa0970930-mRNA-1:exon:1286;Parent=Msa0970930-mRNA-1 |
| chr6_4 | exon | 2590172 | 2590287 | 2590172 | ID=Msa0970930-mRNA-1:exon:1287;Parent=Msa0970930-mRNA-1 |
| chr6_4 | exon | 2591109 | 2591143 | 2591109 | ID=Msa0970930-mRNA-1:exon:1288;Parent=Msa0970930-mRNA-1 |
| chr6_4 | exon | 2591260 | 2591402 | 2591260 | ID=Msa0970930-mRNA-1:exon:1289;Parent=Msa0970930-mRNA-1 |
| chr6_4 | exon | 2591697 | 2591819 | 2591697 | ID=Msa0970930-mRNA-1:exon:1290;Parent=Msa0970930-mRNA-1 |
| chr6_4 | exon | 2592329 | 2592910 | 2592329 | ID=Msa0970930-mRNA-1:exon:1291;Parent=Msa0970930-mRNA-1 |
| chr6_4 | five_prime_UTR | 2585105 | 2585191 | 2585105 | ID=Msa0970930-mRNA-1:five_prime_utr;Parent=Msa0970930-mRNA-1 |
| chr6_4 | CDS | 2585192 | 2585444 | 2585192 | ID=Msa0970930-mRNA-1:cds;Parent=Msa0970930-mRNA-1 |
| chr6_4 | CDS | 2585536 | 2585579 | 2585536 | ID=Msa0970930-mRNA-1:cds;Parent=Msa0970930-mRNA-1 |
| chr6_4 | CDS | 2586798 | 2586907 | 2586798 | ID=Msa0970930-mRNA-1:cds;Parent=Msa0970930-mRNA-1 |
| chr6_4 | CDS | 2587012 | 2587037 | 2587012 | ID=Msa0970930-mRNA-1:cds;Parent=Msa0970930-mRNA-1 |
| chr6_4 | CDS | 2588171 | 2588248 | 2588171 | ID=Msa0970930-mRNA-1:cds;Parent=Msa0970930-mRNA-1 |
| chr6_4 | CDS | 2589230 | 2589283 | 2589230 | ID=Msa0970930-mRNA-1:cds;Parent=Msa0970930-mRNA-1 |
| chr6_4 | CDS | 2589380 | 2589481 | 2589380 | ID=Msa0970930-mRNA-1:cds;Parent=Msa0970930-mRNA-1 |
| chr6_4 | CDS | 2589598 | 2589686 | 2589598 | ID=Msa0970930-mRNA-1:cds;Parent=Msa0970930-mRNA-1 |
| chr6_4 | CDS | 2589791 | 2589894 | 2589791 | ID=Msa0970930-mRNA-1:cds;Parent=Msa0970930-mRNA-1 |
| chr6_4 | CDS | 2590014 | 2590082 | 2590014 | ID=Msa0970930-mRNA-1:cds;Parent=Msa0970930-mRNA-1 |
| chr6_4 | CDS | 2590172 | 2590287 | 2590172 | ID=Msa0970930-mRNA-1:cds;Parent=Msa0970930-mRNA-1 |
| chr6_4 | CDS | 2591109 | 2591143 | 2591109 | ID=Msa0970930-mRNA-1:cds;Parent=Msa0970930-mRNA-1 |
| chr6_4 | CDS | 2591260 | 2591402 | 2591260 | ID=Msa0970930-mRNA-1:cds;Parent=Msa0970930-mRNA-1 |
| chr6_4 | CDS | 2591697 | 2591819 | 2591697 | ID=Msa0970930-mRNA-1:cds;Parent=Msa0970930-mRNA-1 |
| chr6_4 | CDS | 2592329 | 2592422 | 2592329 | ID=Msa0970930-mRNA-1:cds;Parent=Msa0970930-mRNA-1 |
| chr6_4 | three_prime_UTR | 2592423 | 2592910 | 2592423 | ID=Msa0970930-mRNA-1:three_prime_utr;Parent=Msa0970930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
