AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0981750

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0981750 MtrunA17_Chr7g0266821 90.554 307 20 5 1 303 1 302 1.01e-178 495
Msa0981750 MtrunA17_Chr1g0178071 56.637 339 85 14 11 303 6 328 6.41e-101 299
Msa0981750 MtrunA17_Chr8g0345771 66.667 129 40 2 36 161 148 276 7.16e-52 178
Msa0981750 MtrunA17_Chr7g0276471 73.585 106 25 2 59 161 117 222 6.39e-48 166
Msa0981750 MtrunA17_Chr5g0422501 61.667 120 37 1 51 161 227 346 1.21e-44 156
Msa0981750 MtrunA17_Chr1g0198661 57.143 126 40 1 50 161 182 307 2.45e-41 147
Msa0981750 MtrunA17_Chr1g0213701 55.319 94 32 2 57 146 159 246 9.15e-29 112
Msa0981750 MtrunA17_Chr4g0012861 40.541 111 59 5 59 166 314 420 1.56e-15 77.0
Msa0981750 MtrunA17_Chr5g0432721 36.296 135 71 7 59 184 321 449 1.67e-15 77.0
Msa0981750 MtrunA17_Chr2g0281191 37.190 121 69 5 43 160 336 452 4.03e-15 75.9
Msa0981750 MtrunA17_Chr7g0244871 44.318 88 45 3 59 144 12 97 1.07e-14 68.9
Msa0981750 MtrunA17_Chr3g0107701 36.170 141 78 6 59 191 338 474 4.28e-14 72.8
Msa0981750 MtrunA17_Chr8g0389081 34.848 132 77 4 31 160 112 236 5.75e-14 72.4
Msa0981750 MtrunA17_Chr1g0199681 40.000 95 55 2 54 146 187 281 1.07e-12 68.6
Msa0981750 MtrunA17_Chr3g0115271 33.083 133 78 5 51 179 108 233 3.32e-12 67.0
Msa0981750 MtrunA17_Chr2g0326761 36.842 114 68 3 49 160 97 208 3.44e-12 67.0
Msa0981750 MtrunA17_Chr2g0282961 33.813 139 84 3 20 156 124 256 6.64e-12 65.9
Msa0981750 MtrunA17_Chr4g0070181 34.884 129 75 4 34 160 105 226 1.02e-11 65.9
Msa0981750 MtrunA17_Chr2g0301251 34.884 129 75 4 34 160 105 226 1.77e-11 65.1
Msa0981750 MtrunA17_Chr4g0046371 36.937 111 68 2 48 156 136 246 5.40e-11 63.2
Msa0981750 MtrunA17_Chr5g0417281 34.615 104 66 2 45 146 98 201 9.28e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0981750 AT5G06250.5 44.599 287 115 8 1 268 1 262 7.35e-69 215
Msa0981750 AT5G06250.4 45.070 284 112 8 1 265 1 259 3.46e-68 214
Msa0981750 AT5G06250.2 45.070 284 112 8 1 265 1 259 3.87e-68 214
Msa0981750 AT5G06250.3 43.902 287 96 7 1 265 1 244 5.09e-65 205
Msa0981750 AT5G06250.1 43.902 287 96 7 1 265 1 244 5.51e-65 205
Msa0981750 AT3G11580.1 52.404 208 79 5 55 248 24 225 1.03e-61 197
Msa0981750 AT2G36080.3 56.219 201 49 5 54 250 32 197 1.51e-61 195
Msa0981750 AT2G36080.1 56.219 201 49 5 54 250 32 197 1.79e-61 196
Msa0981750 AT3G11580.3 52.404 208 79 5 55 248 24 225 6.40e-61 198
Msa0981750 AT2G36080.4 80.357 112 18 1 54 161 32 143 2.09e-57 182
Msa0981750 AT2G36080.2 80.357 112 18 1 54 161 32 143 2.09e-57 182
Msa0981750 AT3G11580.4 73.109 119 20 1 55 161 24 142 4.22e-57 184
Msa0981750 AT3G11580.2 73.109 119 20 1 55 161 24 142 4.22e-57 184
Msa0981750 AT3G11580.5 73.109 119 20 1 55 161 24 142 4.22e-57 184
Msa0981750 AT3G61970.1 71.795 117 29 1 49 161 12 128 1.08e-53 177
Msa0981750 AT2G46870.1 66.929 127 37 3 40 161 14 140 8.03e-50 167
Msa0981750 AT1G01030.2 46.460 226 90 7 55 250 51 275 7.28e-49 166
Msa0981750 AT1G13260.1 69.369 111 32 1 57 165 185 295 1.30e-48 166
Msa0981750 AT1G01030.1 69.369 111 30 2 55 161 51 161 2.42e-46 160
Msa0981750 AT1G68840.2 60.630 127 47 1 56 179 184 310 8.19e-46 158
Msa0981750 AT1G68840.1 60.630 127 47 1 56 179 184 310 8.19e-46 158
Msa0981750 AT3G25730.1 62.832 113 38 1 57 165 180 292 3.18e-45 156
Msa0981750 AT4G01500.1 40.329 243 94 6 52 244 28 269 4.13e-42 148
Msa0981750 AT1G25560.1 57.812 128 41 2 56 174 191 314 4.39e-42 149
Msa0981750 AT1G51120.1 47.368 95 41 1 59 144 177 271 2.27e-24 101
Msa0981750 AT1G50680.1 45.918 98 41 1 59 144 156 253 1.66e-23 99.0
Msa0981750 AT4G32010.2 40.179 112 60 5 59 167 281 388 4.80e-15 75.9
Msa0981750 AT4G32010.1 40.179 112 60 5 59 167 285 392 5.27e-15 75.9
Msa0981750 AT2G30470.1 40.952 105 56 4 59 161 294 394 9.64e-15 75.1
Msa0981750 AT1G77850.1 35.455 110 67 2 53 160 112 219 6.35e-13 69.3
Msa0981750 AT1G77850.2 35.455 110 67 2 53 160 112 219 6.47e-13 69.3
Msa0981750 AT1G35240.1 37.931 116 69 3 60 173 126 240 2.55e-12 67.8
Msa0981750 AT2G28350.1 32.624 141 92 3 28 166 84 223 8.97e-12 66.2
Msa0981750 AT2G28350.2 32.624 141 92 3 28 166 84 223 9.50e-12 65.9
Msa0981750 AT1G35520.1 37.069 116 70 3 60 173 126 240 2.05e-11 65.1
Msa0981750 AT1G34310.1 36.207 116 71 3 60 173 126 240 2.53e-11 64.7

Find 99 sgRNAs with CRISPR-Local

Find 280 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTACGTCGCTTGGTGTTAA+TGG 0.127068 6_4:-21309822 None:intergenic
TTGATTGAATCTAGCTAATA+TGG 0.221602 6_4:-21311371 None:intergenic
TAATAATTAAAATTAATTAA+AGG 0.231030 6_4:-21311479 None:intergenic
AGCAATCTGGTGACAAAGTT+TGG 0.259112 6_4:-21311244 None:intergenic
TTAATATTTGCTTGATTGAT+AGG 0.259809 6_4:-21311678 None:intergenic
ATCTTTCTTGTCTTAAATTC+AGG 0.265779 6_4:+21311600 Msa0981750:three_prime_UTR
AATAATTAAAATTAATTAAA+GGG 0.270961 6_4:-21311478 None:intergenic
CTCAATTTATTAGTATATTT+AGG 0.273317 6_4:+21311555 Msa0981750:three_prime_UTR
ATTGAGAAAGGTTCCTTTCA+TGG 0.274144 6_4:-21311538 None:intergenic
TATCTCTCAGCATGTTGTTT+TGG 0.292618 6_4:-21309867 None:intergenic
ATTCAGGAGATGCATGTAAA+TGG 0.299023 6_4:+21311616 Msa0981750:three_prime_UTR
TCTTCTAAGCTTTAGGGTTA+AGG 0.311942 6_4:+21311452 Msa0981750:three_prime_UTR
GGAGGTTCCGGTATTCATAT+TGG 0.328744 6_4:+21309958 Msa0981750:CDS
TCCAGGGTGCTGAGGCTGTT+TGG 0.331988 6_4:+21311164 Msa0981750:CDS
TTAATATTAATATTATTATC+AGG 0.333871 6_4:-21311206 None:intergenic
CAGGTAAGTGTTGGAGGTTC+CGG 0.351251 6_4:+21309946 Msa0981750:CDS
TGTGGTTGTGTTCAGACTTT+GGG 0.375824 6_4:-21311117 None:intergenic
CAAAGCTATGTTCTTACAAA+AGG 0.401403 6_4:+21309990 Msa0981750:CDS
GAAATAGTTCGAGTACTTCC+AGG 0.409986 6_4:+21311147 Msa0981750:CDS
GAGGTTGACGGTGGAGGTGG+TGG 0.410580 6_4:-21311313 None:intergenic
TATTTCTCAAACAAAATTTG+AGG 0.414952 6_4:-21309603 None:intergenic
TTCAACTTCCCTACGTCGCT+TGG 0.425371 6_4:-21309831 None:intergenic
TTGAAGGAGGTTGACGGTGG+AGG 0.432392 6_4:-21311319 None:intergenic
TAATATTTGCTTGATTGATA+GGG 0.433944 6_4:-21311677 None:intergenic
GCAATCTGGTGACAAAGTTT+GGG 0.439412 6_4:-21311243 None:intergenic
AAGGAGGTTGACGGTGGAGG+TGG 0.440000 6_4:-21311316 None:intergenic
TGGAGGTGGTGGTAGAATTG+TGG 0.441638 6_4:-21311302 None:intergenic
TACAAGAAACAACATCACTA+TGG 0.450273 6_4:+21309655 Msa0981750:CDS
GGATGATGATGAGTAGGATA+AGG 0.453506 6_4:-21310236 None:intergenic
GTGTGGTTGTGTTCAGACTT+TGG 0.465958 6_4:-21311118 None:intergenic
AGGATGAGTCAGGTAAGTGT+TGG 0.475422 6_4:+21309937 Msa0981750:CDS
GCTATGTTCTTACAAAAGGT+TGG 0.477263 6_4:+21309994 Msa0981750:CDS
GAGGATTTGAAGGAGGTTGA+CGG 0.478467 6_4:-21311325 None:intergenic
TTTGAGGATTTGAAAGAGAG+AGG 0.480033 6_4:-21309587 None:intergenic
GGAGGTGGTGGTAGAATTGT+GGG 0.483601 6_4:-21311301 None:intergenic
TATTAATATTATTATCAGGT+TGG 0.493103 6_4:-21311202 None:intergenic
TGTAGTACGTGAGTGGTTGA+AGG 0.493128 6_4:-21309541 None:intergenic
TACTGTTCCAATATGAATAC+CGG 0.505382 6_4:-21309965 None:intergenic
TTGAGGATTTGAAAGAGAGA+GGG 0.513453 6_4:-21309586 None:intergenic
CCATCTGTAGTGATGGCAAT+GGG 0.515422 6_4:+21310159 Msa0981750:CDS
GACATATTATAAGAGCAATC+TGG 0.517703 6_4:-21311257 None:intergenic
ATGCGCAGGATAGAGTTCTC+TGG 0.519337 6_4:-21310213 None:intergenic
ATCTCGTGGAGGCGCCGCCA+TGG 0.519364 6_4:+21310101 Msa0981750:CDS
CCCATTGCCATCACTACAGA+TGG 0.522140 6_4:-21310159 None:intergenic
TGTAGTGATGGCAATGGGAA+TGG 0.522719 6_4:+21310164 Msa0981750:CDS
TTGATTTCTTCTGAGTCTAG+TGG 0.523246 6_4:-21309894 None:intergenic
ATGAGTCAGGTAAGTGTTGG+AGG 0.531766 6_4:+21309940 Msa0981750:CDS
TGATTTCTTCTGAGTCTAGT+GGG 0.531823 6_4:-21309893 None:intergenic
ATGTGATGGTGAGGATTTGA+AGG 0.538757 6_4:-21311335 None:intergenic
ATATACTAATAAATTGAGAA+AGG 0.542638 6_4:-21311550 None:intergenic
TGGGAATAGCACTGTTCCTG+TGG 0.547485 6_4:+21310184 Msa0981750:CDS
CCATTAACACCAAGCGACGT+AGG 0.548021 6_4:+21309822 Msa0981750:CDS
GAGAGGGTGTGAGAGAGAAG+TGG 0.554099 6_4:-21309570 None:intergenic
CATCCCTTGTCATACCATGC+AGG 0.555918 6_4:+21310254 Msa0981750:CDS
AGCAGATCCATCTGTAGTGA+TGG 0.561002 6_4:+21310152 Msa0981750:CDS
CATTAACACCAAGCGACGTA+GGG 0.563833 6_4:+21309823 Msa0981750:CDS
ATAGCACTGTTCCTGTGGGG+TGG 0.568873 6_4:+21310189 Msa0981750:CDS
AAGAGAATCTAGTTAGGAGA+GGG 0.569754 6_4:-21311421 None:intergenic
TCCAAACAGCCTCAGCACCC+TGG 0.570047 6_4:-21311165 None:intergenic
AGTTCTCTGGACCACCCCAC+AGG 0.570942 6_4:-21310200 None:intergenic
AAAGAGAATCTAGTTAGGAG+AGG 0.571594 6_4:-21311422 None:intergenic
AAAGATAAACGTCTTGATGC+TGG 0.575473 6_4:+21310029 Msa0981750:CDS
ATGTTGTTTCTTGTATTGTG+TGG 0.576167 6_4:-21309647 None:intergenic
GTAGTGATGGCAATGGGAAT+GGG 0.579455 6_4:+21310165 Msa0981750:CDS
GATTTGAAGGAGGTTGACGG+TGG 0.580120 6_4:-21311322 None:intergenic
TGAGTAGGATAAGGATGCGC+AGG 0.580460 6_4:-21310227 None:intergenic
ATGGATCTGCTAACATGAGC+CGG 0.583256 6_4:-21310140 None:intergenic
CGAGTACTTCCAGGGTGCTG+AGG 0.583570 6_4:+21311156 Msa0981750:CDS
GACAAGGGATGATGATGAGT+AGG 0.585445 6_4:-21310242 None:intergenic
CTCAACGGTTGTTTATCTCG+TGG 0.587033 6_4:+21310087 Msa0981750:CDS
GAGGCTGTTTGGAGTGAACA+TGG 0.594809 6_4:+21311175 Msa0981750:CDS
TCCATCTGTAGTGATGGCAA+TGG 0.596273 6_4:+21310158 Msa0981750:CDS
GGGAATAGCACTGTTCCTGT+GGG 0.597826 6_4:+21310185 Msa0981750:CDS
CGAACTATTTCCACAAGGTG+TGG 0.598711 6_4:-21311135 None:intergenic
AGCTGAACTAGAAGATGATG+TGG 0.605647 6_4:+21309725 Msa0981750:CDS
ATGATCAACTGATCCATGAA+AGG 0.608959 6_4:+21311525 Msa0981750:three_prime_UTR
AAGAAACAACATCACTATGG+TGG 0.609594 6_4:+21309658 Msa0981750:CDS
CTAGACTCAGAAGAAATCAA+AGG 0.611927 6_4:+21309897 Msa0981750:CDS
GTTCACGTTGAAGATTGTAG+AGG 0.616609 6_4:+21311577 Msa0981750:three_prime_UTR
CTGAACACAACCACACCTTG+TGG 0.624852 6_4:+21311125 Msa0981750:CDS
AACGGTTGTTTATCTCGTGG+AGG 0.625722 6_4:+21310090 Msa0981750:CDS
GTTTGTTTGTAGTACGTGAG+TGG 0.627281 6_4:-21309548 None:intergenic
GTTGTTGACGTAGCATGTGA+TGG 0.636988 6_4:-21311349 None:intergenic
AAAACCTGCATGGTATGACA+AGG 0.637700 6_4:-21310258 None:intergenic
TGGTAGTGACTCTACTCCAC+CGG 0.642292 6_4:+21310121 Msa0981750:CDS
TGATGGTGAGGATTTGAAGG+AGG 0.642677 6_4:-21311332 None:intergenic
AAATAGTTCGAGTACTTCCA+GGG 0.668571 6_4:+21311148 Msa0981750:CDS
GTTGTAATGTGACAGGTGAA+GGG 0.678694 6_4:+21311093 Msa0981750:intron
TGACGTAGCATGTGATGGTG+AGG 0.679050 6_4:-21311344 None:intergenic
AAACCTGCATGGTATGACAA+GGG 0.685749 6_4:-21310257 None:intergenic
CACGAGATAAACAACCGTTG+AGG 0.688403 6_4:-21310086 None:intergenic
GACACCGTGTACATCCTCAA+CGG 0.690188 6_4:+21310072 Msa0981750:CDS
TATAATATGTCATCAACACA+AGG 0.697764 6_4:+21311269 Msa0981750:CDS
ACAACCGTTGAGGATGTACA+CGG 0.701448 6_4:-21310076 None:intergenic
GATCTGCTAACATGAGCCGG+TGG 0.708271 6_4:-21310137 None:intergenic
GGAATAGCACTGTTCCTGTG+GGG 0.714296 6_4:+21310186 Msa0981750:CDS
GTGGAGTAGAGTCACTACCA+TGG 0.731112 6_4:-21310118 None:intergenic
GTACTCGAACTATTTCCACA+AGG 0.735032 6_4:-21311140 None:intergenic
GAGTAGAGTCACTACCATGG+CGG 0.755745 6_4:-21310115 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATTAAAATTAATTAAA+GGG - chr6_4:21311481-21311500 None:intergenic 0.0%
!! TAATAATTAAAATTAATTAA+AGG - chr6_4:21311482-21311501 None:intergenic 0.0%
!! AATAATTAAAATTAATTAAA+GGG - chr6_4:21311481-21311500 None:intergenic 0.0%
!! TAATAATTAAAATTAATTAA+AGG - chr6_4:21311482-21311501 None:intergenic 0.0%
!!! ATATTCAATATTTTACTTAG+AGG + chr6_4:21310331-21310350 Msa0981750:intron 15.0%
!! TTTGCGTATTTATTTATTTA+TGG + chr6_4:21311020-21311039 Msa0981750:intron 15.0%
!! TATTAATATTATTATCAGGT+TGG - chr6_4:21311205-21311224 None:intergenic 15.0%
!! ATATACTAATAAATTGAGAA+AGG - chr6_4:21311553-21311572 None:intergenic 15.0%
!! CTCAATTTATTAGTATATTT+AGG + chr6_4:21311555-21311574 Msa0981750:three_prime_UTR 15.0%
!!! ATATTCAATATTTTACTTAG+AGG + chr6_4:21310331-21310350 Msa0981750:intron 15.0%
!! TTTGCGTATTTATTTATTTA+TGG + chr6_4:21311020-21311039 Msa0981750:intron 15.0%
!! TATTAATATTATTATCAGGT+TGG - chr6_4:21311205-21311224 None:intergenic 15.0%
!! ATATACTAATAAATTGAGAA+AGG - chr6_4:21311553-21311572 None:intergenic 15.0%
!! CTCAATTTATTAGTATATTT+AGG + chr6_4:21311555-21311574 Msa0981750:three_prime_UTR 15.0%
!! TATTTCTCAAACAAAATTTG+AGG - chr6_4:21309606-21309625 None:intergenic 20.0%
!! ATGTATATAAGAGATTATAG+TGG - chr6_4:21310291-21310310 None:intergenic 20.0%
!! ATTCTATTACAAATTTCAGA+TGG + chr6_4:21310684-21310703 Msa0981750:intron 20.0%
!! AAATTAAATTCAACAAAAGC+AGG - chr6_4:21310890-21310909 None:intergenic 20.0%
!! TTGAATTGAAAATGAATGTA+TGG + chr6_4:21311058-21311077 Msa0981750:intron 20.0%
!! TGAATTGAAAATGAATGTAT+GGG + chr6_4:21311059-21311078 Msa0981750:intron 20.0%
!! AAAAAAAAGAGAATCTAGTT+AGG - chr6_4:21311430-21311449 None:intergenic 20.0%
!!! TTTTTTTTCTTCTAAGCTTT+AGG + chr6_4:21311445-21311464 Msa0981750:three_prime_UTR 20.0%
!!! TTTTTTTCTTCTAAGCTTTA+GGG + chr6_4:21311446-21311465 Msa0981750:three_prime_UTR 20.0%
!! TATTTCTCAAACAAAATTTG+AGG - chr6_4:21309606-21309625 None:intergenic 20.0%
!! ATGTATATAAGAGATTATAG+TGG - chr6_4:21310291-21310310 None:intergenic 20.0%
!! ATTCTATTACAAATTTCAGA+TGG + chr6_4:21310684-21310703 Msa0981750:intron 20.0%
!! AAATTAAATTCAACAAAAGC+AGG - chr6_4:21310890-21310909 None:intergenic 20.0%
!! TTGAATTGAAAATGAATGTA+TGG + chr6_4:21311058-21311077 Msa0981750:intron 20.0%
!! TGAATTGAAAATGAATGTAT+GGG + chr6_4:21311059-21311078 Msa0981750:intron 20.0%
!! AAAAAAAAGAGAATCTAGTT+AGG - chr6_4:21311430-21311449 None:intergenic 20.0%
!!! TTTTTTTTCTTCTAAGCTTT+AGG + chr6_4:21311445-21311464 Msa0981750:three_prime_UTR 20.0%
!!! TTTTTTTCTTCTAAGCTTTA+GGG + chr6_4:21311446-21311465 Msa0981750:three_prime_UTR 20.0%
!!! TATAAGAGATTATAGTGGAT+AGG - chr6_4:21310286-21310305 None:intergenic 25.0%
! TATTAGACGATTGTTTATCA+CGG - chr6_4:21310391-21310410 None:intergenic 25.0%
! ATTGTTTAGACGAAAAGTTT+AGG - chr6_4:21310492-21310511 None:intergenic 25.0%
! TAGTAATTTGAATTTCCCAT+GGG + chr6_4:21310643-21310662 Msa0981750:intron 25.0%
! TATTACAAATTTCAGATGGA+TGG + chr6_4:21310688-21310707 Msa0981750:intron 25.0%
!! TTAACGTTTTCAACGTTAAA+AGG + chr6_4:21310928-21310947 Msa0981750:intron 25.0%
! TATAATATGTCATCAACACA+AGG + chr6_4:21311269-21311288 Msa0981750:CDS 25.0%
! TTGATTGAATCTAGCTAATA+TGG - chr6_4:21311374-21311393 None:intergenic 25.0%
! ATCTTTCTTGTCTTAAATTC+AGG + chr6_4:21311600-21311619 Msa0981750:three_prime_UTR 25.0%
!!! TATAAGAGATTATAGTGGAT+AGG - chr6_4:21310286-21310305 None:intergenic 25.0%
! TATTAGACGATTGTTTATCA+CGG - chr6_4:21310391-21310410 None:intergenic 25.0%
! ATTGTTTAGACGAAAAGTTT+AGG - chr6_4:21310492-21310511 None:intergenic 25.0%
! TAGTAATTTGAATTTCCCAT+GGG + chr6_4:21310643-21310662 Msa0981750:intron 25.0%
! TATTACAAATTTCAGATGGA+TGG + chr6_4:21310688-21310707 Msa0981750:intron 25.0%
!! TTAACGTTTTCAACGTTAAA+AGG + chr6_4:21310928-21310947 Msa0981750:intron 25.0%
! TATAATATGTCATCAACACA+AGG + chr6_4:21311269-21311288 Msa0981750:CDS 25.0%
! TTGATTGAATCTAGCTAATA+TGG - chr6_4:21311374-21311393 None:intergenic 25.0%
! ATCTTTCTTGTCTTAAATTC+AGG + chr6_4:21311600-21311619 Msa0981750:three_prime_UTR 25.0%
!! ATGTTGTTTCTTGTATTGTG+TGG - chr6_4:21309650-21309669 None:intergenic 30.0%
TACAAGAAACAACATCACTA+TGG + chr6_4:21309655-21309674 Msa0981750:CDS 30.0%
!!! AGGTTTGTTACTAAGTTTTG+AGG + chr6_4:21309917-21309936 Msa0981750:CDS 30.0%
TACTGTTCCAATATGAATAC+CGG - chr6_4:21309968-21309987 None:intergenic 30.0%
CAAAGCTATGTTCTTACAAA+AGG + chr6_4:21309990-21310009 Msa0981750:CDS 30.0%
TTAGACGAAAAGTTTAGGAA+GGG - chr6_4:21310487-21310506 None:intergenic 30.0%
TTTAGACGAAAAGTTTAGGA+AGG - chr6_4:21310488-21310507 None:intergenic 30.0%
CTAGTAATTTGAATTTCCCA+TGG + chr6_4:21310642-21310661 Msa0981750:intron 30.0%
CTGACAATATATATACCCAT+GGG - chr6_4:21310661-21310680 None:intergenic 30.0%
ACTGACAATATATATACCCA+TGG - chr6_4:21310662-21310681 None:intergenic 30.0%
AAAACATACATGCAACACAA+TGG - chr6_4:21310715-21310734 None:intergenic 30.0%
GACATATTATAAGAGCAATC+TGG - chr6_4:21311260-21311279 None:intergenic 30.0%
!! ATGTTGTTTCTTGTATTGTG+TGG - chr6_4:21309650-21309669 None:intergenic 30.0%
TACAAGAAACAACATCACTA+TGG + chr6_4:21309655-21309674 Msa0981750:CDS 30.0%
!!! AGGTTTGTTACTAAGTTTTG+AGG + chr6_4:21309917-21309936 Msa0981750:CDS 30.0%
TACTGTTCCAATATGAATAC+CGG - chr6_4:21309968-21309987 None:intergenic 30.0%
CAAAGCTATGTTCTTACAAA+AGG + chr6_4:21309990-21310009 Msa0981750:CDS 30.0%
TTAGACGAAAAGTTTAGGAA+GGG - chr6_4:21310487-21310506 None:intergenic 30.0%
TTTAGACGAAAAGTTTAGGA+AGG - chr6_4:21310488-21310507 None:intergenic 30.0%
CTAGTAATTTGAATTTCCCA+TGG + chr6_4:21310642-21310661 Msa0981750:intron 30.0%
CTGACAATATATATACCCAT+GGG - chr6_4:21310661-21310680 None:intergenic 30.0%
ACTGACAATATATATACCCA+TGG - chr6_4:21310662-21310681 None:intergenic 30.0%
AAAACATACATGCAACACAA+TGG - chr6_4:21310715-21310734 None:intergenic 30.0%
GACATATTATAAGAGCAATC+TGG - chr6_4:21311260-21311279 None:intergenic 30.0%
TTGAGGATTTGAAAGAGAGA+GGG - chr6_4:21309589-21309608 None:intergenic 35.0%
TTTGAGGATTTGAAAGAGAG+AGG - chr6_4:21309590-21309609 None:intergenic 35.0%
AAGAAACAACATCACTATGG+TGG + chr6_4:21309658-21309677 Msa0981750:CDS 35.0%
!!! GTTGTTTTGGAATAACGAGT+CGG - chr6_4:21309857-21309876 None:intergenic 35.0%
!! TATCTCTCAGCATGTTGTTT+TGG - chr6_4:21309870-21309889 None:intergenic 35.0%
TGATTTCTTCTGAGTCTAGT+GGG - chr6_4:21309896-21309915 None:intergenic 35.0%
TTGATTTCTTCTGAGTCTAG+TGG - chr6_4:21309897-21309916 None:intergenic 35.0%
CTAGACTCAGAAGAAATCAA+AGG + chr6_4:21309897-21309916 Msa0981750:CDS 35.0%
GCTATGTTCTTACAAAAGGT+TGG + chr6_4:21309994-21310013 Msa0981750:CDS 35.0%
AAAGATAAACGTCTTGATGC+TGG + chr6_4:21310029-21310048 Msa0981750:CDS 35.0%
AAGGGTAACTTCCAGTTATT+TGG + chr6_4:21310774-21310793 Msa0981750:intron 35.0%
AGGGTAACTTCCAGTTATTT+GGG + chr6_4:21310775-21310794 Msa0981750:intron 35.0%
ATAATGTGACCTAAAGTGTG+TGG + chr6_4:21310847-21310866 Msa0981750:intron 35.0%
TTTCAACGTTAAAAGGTTGC+AGG + chr6_4:21310935-21310954 Msa0981750:intron 35.0%
! TGTTTGTTTCTTTCGCTTGT+TGG + chr6_4:21310969-21310988 Msa0981750:intron 35.0%
! GTTTGTTTCTTTCGCTTGTT+GGG + chr6_4:21310970-21310989 Msa0981750:intron 35.0%
AAATAGTTCGAGTACTTCCA+GGG + chr6_4:21311148-21311167 Msa0981750:CDS 35.0%
AAGAGAATCTAGTTAGGAGA+GGG - chr6_4:21311424-21311443 None:intergenic 35.0%
AAAGAGAATCTAGTTAGGAG+AGG - chr6_4:21311425-21311444 None:intergenic 35.0%
!! TCTTCTAAGCTTTAGGGTTA+AGG + chr6_4:21311452-21311471 Msa0981750:three_prime_UTR 35.0%
ATGATCAACTGATCCATGAA+AGG + chr6_4:21311525-21311544 Msa0981750:three_prime_UTR 35.0%
ATTGAGAAAGGTTCCTTTCA+TGG - chr6_4:21311541-21311560 None:intergenic 35.0%
ATTCAGGAGATGCATGTAAA+TGG + chr6_4:21311616-21311635 Msa0981750:three_prime_UTR 35.0%
TTGAGGATTTGAAAGAGAGA+GGG - chr6_4:21309589-21309608 None:intergenic 35.0%
TTTGAGGATTTGAAAGAGAG+AGG - chr6_4:21309590-21309609 None:intergenic 35.0%
AAGAAACAACATCACTATGG+TGG + chr6_4:21309658-21309677 Msa0981750:CDS 35.0%
!!! GTTGTTTTGGAATAACGAGT+CGG - chr6_4:21309857-21309876 None:intergenic 35.0%
!! TATCTCTCAGCATGTTGTTT+TGG - chr6_4:21309870-21309889 None:intergenic 35.0%
TGATTTCTTCTGAGTCTAGT+GGG - chr6_4:21309896-21309915 None:intergenic 35.0%
TTGATTTCTTCTGAGTCTAG+TGG - chr6_4:21309897-21309916 None:intergenic 35.0%
CTAGACTCAGAAGAAATCAA+AGG + chr6_4:21309897-21309916 Msa0981750:CDS 35.0%
GCTATGTTCTTACAAAAGGT+TGG + chr6_4:21309994-21310013 Msa0981750:CDS 35.0%
AAAGATAAACGTCTTGATGC+TGG + chr6_4:21310029-21310048 Msa0981750:CDS 35.0%
AAGGGTAACTTCCAGTTATT+TGG + chr6_4:21310774-21310793 Msa0981750:intron 35.0%
AGGGTAACTTCCAGTTATTT+GGG + chr6_4:21310775-21310794 Msa0981750:intron 35.0%
ATAATGTGACCTAAAGTGTG+TGG + chr6_4:21310847-21310866 Msa0981750:intron 35.0%
TTTCAACGTTAAAAGGTTGC+AGG + chr6_4:21310935-21310954 Msa0981750:intron 35.0%
! TGTTTGTTTCTTTCGCTTGT+TGG + chr6_4:21310969-21310988 Msa0981750:intron 35.0%
! GTTTGTTTCTTTCGCTTGTT+GGG + chr6_4:21310970-21310989 Msa0981750:intron 35.0%
AAATAGTTCGAGTACTTCCA+GGG + chr6_4:21311148-21311167 Msa0981750:CDS 35.0%
AAGAGAATCTAGTTAGGAGA+GGG - chr6_4:21311424-21311443 None:intergenic 35.0%
AAAGAGAATCTAGTTAGGAG+AGG - chr6_4:21311425-21311444 None:intergenic 35.0%
!! TCTTCTAAGCTTTAGGGTTA+AGG + chr6_4:21311452-21311471 Msa0981750:three_prime_UTR 35.0%
ATGATCAACTGATCCATGAA+AGG + chr6_4:21311525-21311544 Msa0981750:three_prime_UTR 35.0%
ATTGAGAAAGGTTCCTTTCA+TGG - chr6_4:21311541-21311560 None:intergenic 35.0%
ATTCAGGAGATGCATGTAAA+TGG + chr6_4:21311616-21311635 Msa0981750:three_prime_UTR 35.0%
GTTTGTTTGTAGTACGTGAG+TGG - chr6_4:21309551-21309570 None:intergenic 40.0%
AGCTGAACTAGAAGATGATG+TGG + chr6_4:21309725-21309744 Msa0981750:CDS 40.0%
!!! CTAAGTTTTGAGGATGAGTC+AGG + chr6_4:21309927-21309946 Msa0981750:CDS 40.0%
! GGATGATGATGAGTAGGATA+AGG - chr6_4:21310239-21310258 None:intergenic 40.0%
AAACCTGCATGGTATGACAA+GGG - chr6_4:21310260-21310279 None:intergenic 40.0%
AAAACCTGCATGGTATGACA+AGG - chr6_4:21310261-21310280 None:intergenic 40.0%
TGGATAGGTAAAAACCTGCA+TGG - chr6_4:21310271-21310290 None:intergenic 40.0%
CTAATTACTCGTGCACTATG+TGG - chr6_4:21310541-21310560 None:intergenic 40.0%
! ACTTCCAGTTATTTGGGACT+TGG + chr6_4:21310781-21310800 Msa0981750:intron 40.0%
TGTTGTAATGTGACAGGTGA+AGG + chr6_4:21311092-21311111 Msa0981750:intron 40.0%
GTTGTAATGTGACAGGTGAA+GGG + chr6_4:21311093-21311112 Msa0981750:intron 40.0%
TGTGGTTGTGTTCAGACTTT+GGG - chr6_4:21311120-21311139 None:intergenic 40.0%
GTACTCGAACTATTTCCACA+AGG - chr6_4:21311143-21311162 None:intergenic 40.0%
GAAATAGTTCGAGTACTTCC+AGG + chr6_4:21311147-21311166 Msa0981750:CDS 40.0%
GCAATCTGGTGACAAAGTTT+GGG - chr6_4:21311246-21311265 None:intergenic 40.0%
AGCAATCTGGTGACAAAGTT+TGG - chr6_4:21311247-21311266 None:intergenic 40.0%
! ATGTGATGGTGAGGATTTGA+AGG - chr6_4:21311338-21311357 None:intergenic 40.0%
GTTCACGTTGAAGATTGTAG+AGG + chr6_4:21311577-21311596 Msa0981750:three_prime_UTR 40.0%
GTTTGTTTGTAGTACGTGAG+TGG - chr6_4:21309551-21309570 None:intergenic 40.0%
AGCTGAACTAGAAGATGATG+TGG + chr6_4:21309725-21309744 Msa0981750:CDS 40.0%
!!! CTAAGTTTTGAGGATGAGTC+AGG + chr6_4:21309927-21309946 Msa0981750:CDS 40.0%
! GGATGATGATGAGTAGGATA+AGG - chr6_4:21310239-21310258 None:intergenic 40.0%
AAACCTGCATGGTATGACAA+GGG - chr6_4:21310260-21310279 None:intergenic 40.0%
AAAACCTGCATGGTATGACA+AGG - chr6_4:21310261-21310280 None:intergenic 40.0%
TGGATAGGTAAAAACCTGCA+TGG - chr6_4:21310271-21310290 None:intergenic 40.0%
CTAATTACTCGTGCACTATG+TGG - chr6_4:21310541-21310560 None:intergenic 40.0%
! ACTTCCAGTTATTTGGGACT+TGG + chr6_4:21310781-21310800 Msa0981750:intron 40.0%
TGTTGTAATGTGACAGGTGA+AGG + chr6_4:21311092-21311111 Msa0981750:intron 40.0%
GTTGTAATGTGACAGGTGAA+GGG + chr6_4:21311093-21311112 Msa0981750:intron 40.0%
TGTGGTTGTGTTCAGACTTT+GGG - chr6_4:21311120-21311139 None:intergenic 40.0%
GTACTCGAACTATTTCCACA+AGG - chr6_4:21311143-21311162 None:intergenic 40.0%
GAAATAGTTCGAGTACTTCC+AGG + chr6_4:21311147-21311166 Msa0981750:CDS 40.0%
GCAATCTGGTGACAAAGTTT+GGG - chr6_4:21311246-21311265 None:intergenic 40.0%
AGCAATCTGGTGACAAAGTT+TGG - chr6_4:21311247-21311266 None:intergenic 40.0%
! ATGTGATGGTGAGGATTTGA+AGG - chr6_4:21311338-21311357 None:intergenic 40.0%
GTTCACGTTGAAGATTGTAG+AGG + chr6_4:21311577-21311596 Msa0981750:three_prime_UTR 40.0%
TGTAGTACGTGAGTGGTTGA+AGG - chr6_4:21309544-21309563 None:intergenic 45.0%
CATTAACACCAAGCGACGTA+GGG + chr6_4:21309823-21309842 Msa0981750:CDS 45.0%
AGGATGAGTCAGGTAAGTGT+TGG + chr6_4:21309937-21309956 Msa0981750:CDS 45.0%
!! ATGAGTCAGGTAAGTGTTGG+AGG + chr6_4:21309940-21309959 Msa0981750:CDS 45.0%
GGAGGTTCCGGTATTCATAT+TGG + chr6_4:21309958-21309977 Msa0981750:CDS 45.0%
ACAACCGTTGAGGATGTACA+CGG - chr6_4:21310079-21310098 None:intergenic 45.0%
CACGAGATAAACAACCGTTG+AGG - chr6_4:21310089-21310108 None:intergenic 45.0%
CTCAACGGTTGTTTATCTCG+TGG + chr6_4:21310087-21310106 Msa0981750:CDS 45.0%
AACGGTTGTTTATCTCGTGG+AGG + chr6_4:21310090-21310109 Msa0981750:CDS 45.0%
ATGGATCTGCTAACATGAGC+CGG - chr6_4:21310143-21310162 None:intergenic 45.0%
AGCAGATCCATCTGTAGTGA+TGG + chr6_4:21310152-21310171 Msa0981750:CDS 45.0%
TCCATCTGTAGTGATGGCAA+TGG + chr6_4:21310158-21310177 Msa0981750:CDS 45.0%
CCATCTGTAGTGATGGCAAT+GGG + chr6_4:21310159-21310178 Msa0981750:CDS 45.0%
TGTAGTGATGGCAATGGGAA+TGG + chr6_4:21310164-21310183 Msa0981750:CDS 45.0%
GTAGTGATGGCAATGGGAAT+GGG + chr6_4:21310165-21310184 Msa0981750:CDS 45.0%
! GACAAGGGATGATGATGAGT+AGG - chr6_4:21310245-21310264 None:intergenic 45.0%
! TCCAGTTATTTGGGACTTGG+AGG + chr6_4:21310784-21310803 Msa0981750:intron 45.0%
TCCTCCAAGTCCCAAATAAC+TGG - chr6_4:21310788-21310807 None:intergenic 45.0%
! ATTTGGGACTTGGAGGAATG+AGG + chr6_4:21310791-21310810 Msa0981750:intron 45.0%
TGCACGTGTTGTAATGTGAC+AGG + chr6_4:21311086-21311105 Msa0981750:intron 45.0%
GTGTGGTTGTGTTCAGACTT+TGG - chr6_4:21311121-21311140 None:intergenic 45.0%
CGAACTATTTCCACAAGGTG+TGG - chr6_4:21311138-21311157 None:intergenic 45.0%
GAGGATTTGAAGGAGGTTGA+CGG - chr6_4:21311328-21311347 None:intergenic 45.0%
! TGATGGTGAGGATTTGAAGG+AGG - chr6_4:21311335-21311354 None:intergenic 45.0%
GTTGTTGACGTAGCATGTGA+TGG - chr6_4:21311352-21311371 None:intergenic 45.0%
TGTAGTACGTGAGTGGTTGA+AGG - chr6_4:21309544-21309563 None:intergenic 45.0%
CATTAACACCAAGCGACGTA+GGG + chr6_4:21309823-21309842 Msa0981750:CDS 45.0%
AGGATGAGTCAGGTAAGTGT+TGG + chr6_4:21309937-21309956 Msa0981750:CDS 45.0%
!! ATGAGTCAGGTAAGTGTTGG+AGG + chr6_4:21309940-21309959 Msa0981750:CDS 45.0%
GGAGGTTCCGGTATTCATAT+TGG + chr6_4:21309958-21309977 Msa0981750:CDS 45.0%
ACAACCGTTGAGGATGTACA+CGG - chr6_4:21310079-21310098 None:intergenic 45.0%
CACGAGATAAACAACCGTTG+AGG - chr6_4:21310089-21310108 None:intergenic 45.0%
CTCAACGGTTGTTTATCTCG+TGG + chr6_4:21310087-21310106 Msa0981750:CDS 45.0%
AACGGTTGTTTATCTCGTGG+AGG + chr6_4:21310090-21310109 Msa0981750:CDS 45.0%
ATGGATCTGCTAACATGAGC+CGG - chr6_4:21310143-21310162 None:intergenic 45.0%
AGCAGATCCATCTGTAGTGA+TGG + chr6_4:21310152-21310171 Msa0981750:CDS 45.0%
TCCATCTGTAGTGATGGCAA+TGG + chr6_4:21310158-21310177 Msa0981750:CDS 45.0%
CCATCTGTAGTGATGGCAAT+GGG + chr6_4:21310159-21310178 Msa0981750:CDS 45.0%
TGTAGTGATGGCAATGGGAA+TGG + chr6_4:21310164-21310183 Msa0981750:CDS 45.0%
GTAGTGATGGCAATGGGAAT+GGG + chr6_4:21310165-21310184 Msa0981750:CDS 45.0%
! GACAAGGGATGATGATGAGT+AGG - chr6_4:21310245-21310264 None:intergenic 45.0%
! TCCAGTTATTTGGGACTTGG+AGG + chr6_4:21310784-21310803 Msa0981750:intron 45.0%
TCCTCCAAGTCCCAAATAAC+TGG - chr6_4:21310788-21310807 None:intergenic 45.0%
! ATTTGGGACTTGGAGGAATG+AGG + chr6_4:21310791-21310810 Msa0981750:intron 45.0%
TGCACGTGTTGTAATGTGAC+AGG + chr6_4:21311086-21311105 Msa0981750:intron 45.0%
GTGTGGTTGTGTTCAGACTT+TGG - chr6_4:21311121-21311140 None:intergenic 45.0%
CGAACTATTTCCACAAGGTG+TGG - chr6_4:21311138-21311157 None:intergenic 45.0%
GAGGATTTGAAGGAGGTTGA+CGG - chr6_4:21311328-21311347 None:intergenic 45.0%
! TGATGGTGAGGATTTGAAGG+AGG - chr6_4:21311335-21311354 None:intergenic 45.0%
GTTGTTGACGTAGCATGTGA+TGG - chr6_4:21311352-21311371 None:intergenic 45.0%
!!! TATTTTATTCTTTTAAATAA+AGG + chr6_4:21310755-21310774 Msa0981750:intron 5.0%
!!! ATTTTATTCTTTTAAATAAA+GGG + chr6_4:21310756-21310775 Msa0981750:intron 5.0%
!! TTAATATTAATATTATTATC+AGG - chr6_4:21311209-21311228 None:intergenic 5.0%
!!! TATTTTATTCTTTTAAATAA+AGG + chr6_4:21310755-21310774 Msa0981750:intron 5.0%
!!! ATTTTATTCTTTTAAATAAA+GGG + chr6_4:21310756-21310775 Msa0981750:intron 5.0%
!! TTAATATTAATATTATTATC+AGG - chr6_4:21311209-21311228 None:intergenic 5.0%
!! CCTACGTCGCTTGGTGTTAA+TGG - chr6_4:21309825-21309844 None:intergenic 50.0%
CCATTAACACCAAGCGACGT+AGG + chr6_4:21309822-21309841 Msa0981750:CDS 50.0%
TTCAACTTCCCTACGTCGCT+TGG - chr6_4:21309834-21309853 None:intergenic 50.0%
!! CAGGTAAGTGTTGGAGGTTC+CGG + chr6_4:21309946-21309965 Msa0981750:CDS 50.0%
GACACCGTGTACATCCTCAA+CGG + chr6_4:21310072-21310091 Msa0981750:CDS 50.0%
GAGTAGAGTCACTACCATGG+CGG - chr6_4:21310118-21310137 None:intergenic 50.0%
GTGGAGTAGAGTCACTACCA+TGG - chr6_4:21310121-21310140 None:intergenic 50.0%
! TGGTAGTGACTCTACTCCAC+CGG + chr6_4:21310121-21310140 Msa0981750:CDS 50.0%
CCCATTGCCATCACTACAGA+TGG - chr6_4:21310162-21310181 None:intergenic 50.0%
TGGGAATAGCACTGTTCCTG+TGG + chr6_4:21310184-21310203 Msa0981750:CDS 50.0%
GGGAATAGCACTGTTCCTGT+GGG + chr6_4:21310185-21310204 Msa0981750:CDS 50.0%
GGAATAGCACTGTTCCTGTG+GGG + chr6_4:21310186-21310205 Msa0981750:CDS 50.0%
ATGCGCAGGATAGAGTTCTC+TGG - chr6_4:21310216-21310235 None:intergenic 50.0%
TGAGTAGGATAAGGATGCGC+AGG - chr6_4:21310230-21310249 None:intergenic 50.0%
CATCCCTTGTCATACCATGC+AGG + chr6_4:21310254-21310273 Msa0981750:CDS 50.0%
CTGAACACAACCACACCTTG+TGG + chr6_4:21311125-21311144 Msa0981750:CDS 50.0%
! GAGGCTGTTTGGAGTGAACA+TGG + chr6_4:21311175-21311194 Msa0981750:CDS 50.0%
! GGAGGTGGTGGTAGAATTGT+GGG - chr6_4:21311304-21311323 None:intergenic 50.0%
! TGGAGGTGGTGGTAGAATTG+TGG - chr6_4:21311305-21311324 None:intergenic 50.0%
GATTTGAAGGAGGTTGACGG+TGG - chr6_4:21311325-21311344 None:intergenic 50.0%
! TGACGTAGCATGTGATGGTG+AGG - chr6_4:21311347-21311366 None:intergenic 50.0%
!! CCTACGTCGCTTGGTGTTAA+TGG - chr6_4:21309825-21309844 None:intergenic 50.0%
CCATTAACACCAAGCGACGT+AGG + chr6_4:21309822-21309841 Msa0981750:CDS 50.0%
TTCAACTTCCCTACGTCGCT+TGG - chr6_4:21309834-21309853 None:intergenic 50.0%
!! CAGGTAAGTGTTGGAGGTTC+CGG + chr6_4:21309946-21309965 Msa0981750:CDS 50.0%
GACACCGTGTACATCCTCAA+CGG + chr6_4:21310072-21310091 Msa0981750:CDS 50.0%
GAGTAGAGTCACTACCATGG+CGG - chr6_4:21310118-21310137 None:intergenic 50.0%
GTGGAGTAGAGTCACTACCA+TGG - chr6_4:21310121-21310140 None:intergenic 50.0%
! TGGTAGTGACTCTACTCCAC+CGG + chr6_4:21310121-21310140 Msa0981750:CDS 50.0%
CCCATTGCCATCACTACAGA+TGG - chr6_4:21310162-21310181 None:intergenic 50.0%
TGGGAATAGCACTGTTCCTG+TGG + chr6_4:21310184-21310203 Msa0981750:CDS 50.0%
GGGAATAGCACTGTTCCTGT+GGG + chr6_4:21310185-21310204 Msa0981750:CDS 50.0%
GGAATAGCACTGTTCCTGTG+GGG + chr6_4:21310186-21310205 Msa0981750:CDS 50.0%
ATGCGCAGGATAGAGTTCTC+TGG - chr6_4:21310216-21310235 None:intergenic 50.0%
TGAGTAGGATAAGGATGCGC+AGG - chr6_4:21310230-21310249 None:intergenic 50.0%
CATCCCTTGTCATACCATGC+AGG + chr6_4:21310254-21310273 Msa0981750:CDS 50.0%
CTGAACACAACCACACCTTG+TGG + chr6_4:21311125-21311144 Msa0981750:CDS 50.0%
! GAGGCTGTTTGGAGTGAACA+TGG + chr6_4:21311175-21311194 Msa0981750:CDS 50.0%
! GGAGGTGGTGGTAGAATTGT+GGG - chr6_4:21311304-21311323 None:intergenic 50.0%
! TGGAGGTGGTGGTAGAATTG+TGG - chr6_4:21311305-21311324 None:intergenic 50.0%
GATTTGAAGGAGGTTGACGG+TGG - chr6_4:21311325-21311344 None:intergenic 50.0%
! TGACGTAGCATGTGATGGTG+AGG - chr6_4:21311347-21311366 None:intergenic 50.0%
! GAGAGGGTGTGAGAGAGAAG+TGG - chr6_4:21309573-21309592 None:intergenic 55.0%
GATCTGCTAACATGAGCCGG+TGG - chr6_4:21310140-21310159 None:intergenic 55.0%
ATAGCACTGTTCCTGTGGGG+TGG + chr6_4:21310189-21310208 Msa0981750:CDS 55.0%
GGCTTCACGCCACACACTTT+AGG - chr6_4:21310859-21310878 None:intergenic 55.0%
TTGAAGGAGGTTGACGGTGG+AGG - chr6_4:21311322-21311341 None:intergenic 55.0%
! GAGAGGGTGTGAGAGAGAAG+TGG - chr6_4:21309573-21309592 None:intergenic 55.0%
GATCTGCTAACATGAGCCGG+TGG - chr6_4:21310140-21310159 None:intergenic 55.0%
ATAGCACTGTTCCTGTGGGG+TGG + chr6_4:21310189-21310208 Msa0981750:CDS 55.0%
GGCTTCACGCCACACACTTT+AGG - chr6_4:21310859-21310878 None:intergenic 55.0%
TTGAAGGAGGTTGACGGTGG+AGG - chr6_4:21311322-21311341 None:intergenic 55.0%
AGTTCTCTGGACCACCCCAC+AGG - chr6_4:21310203-21310222 None:intergenic 60.0%
CAACAAAAGCAGGCGCGCGT+AGG - chr6_4:21310880-21310899 None:intergenic 60.0%
!! CGAGTACTTCCAGGGTGCTG+AGG + chr6_4:21311156-21311175 Msa0981750:CDS 60.0%
!! TCCAGGGTGCTGAGGCTGTT+TGG + chr6_4:21311164-21311183 Msa0981750:CDS 60.0%
TCCAAACAGCCTCAGCACCC+TGG - chr6_4:21311168-21311187 None:intergenic 60.0%
AAGGAGGTTGACGGTGGAGG+TGG - chr6_4:21311319-21311338 None:intergenic 60.0%
AGTTCTCTGGACCACCCCAC+AGG - chr6_4:21310203-21310222 None:intergenic 60.0%
CAACAAAAGCAGGCGCGCGT+AGG - chr6_4:21310880-21310899 None:intergenic 60.0%
!! CGAGTACTTCCAGGGTGCTG+AGG + chr6_4:21311156-21311175 Msa0981750:CDS 60.0%
!! TCCAGGGTGCTGAGGCTGTT+TGG + chr6_4:21311164-21311183 Msa0981750:CDS 60.0%
TCCAAACAGCCTCAGCACCC+TGG - chr6_4:21311168-21311187 None:intergenic 60.0%
AAGGAGGTTGACGGTGGAGG+TGG - chr6_4:21311319-21311338 None:intergenic 60.0%
GAGGTTGACGGTGGAGGTGG+TGG - chr6_4:21311316-21311335 None:intergenic 65.0%
GAGGTTGACGGTGGAGGTGG+TGG - chr6_4:21311316-21311335 None:intergenic 65.0%
!! ATCTCGTGGAGGCGCCGCCA+TGG + chr6_4:21310101-21310120 Msa0981750:CDS 70.0%
!! ATCTCGTGGAGGCGCCGCCA+TGG + chr6_4:21310101-21310120 Msa0981750:CDS 70.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 21309520 21311695 21309520 ID=Msa0981750;Name=Msa0981750
chr6_4 mRNA 21309520 21311695 21309520 ID=Msa0981750-mRNA-1;Parent=Msa0981750;Name=Msa0981750-mRNA-1;_AED=0.01;_eAED=0.01;_QI=116|1|1|1|1|1|2|316|303
chr6_4 exon 21309520 21310275 21309520 ID=Msa0981750-mRNA-1:exon:6537;Parent=Msa0981750-mRNA-1
chr6_4 exon 21311108 21311695 21311108 ID=Msa0981750-mRNA-1:exon:6538;Parent=Msa0981750-mRNA-1
chr6_4 five_prime_UTR 21309520 21309635 21309520 ID=Msa0981750-mRNA-1:five_prime_utr;Parent=Msa0981750-mRNA-1
chr6_4 CDS 21309636 21310275 21309636 ID=Msa0981750-mRNA-1:cds;Parent=Msa0981750-mRNA-1
chr6_4 CDS 21311108 21311379 21311108 ID=Msa0981750-mRNA-1:cds;Parent=Msa0981750-mRNA-1
chr6_4 three_prime_UTR 21311380 21311695 21311380 ID=Msa0981750-mRNA-1:three_prime_utr;Parent=Msa0981750-mRNA-1
Gene Sequence

>Msa0981750

ATGTCAATAAACCACACAATACAAGAAACAACATCACTATGGTGGAATCAACAACAACAACAACAAAGAACTCAACAAGATGCAGAAGAAGCTGAACTAGAAGATGATGTGGTTTTAGAATCAATAATGAAACTAAAAACAACAGAAGCATCATCAGAAGAAGAGAAAGAAGCTATGTTCGAGAAACCATTAACACCAAGCGACGTAGGGAAGTTGAACCGACTCGTTATTCCAAAACAACATGCTGAGAGATATTTCCCACTAGACTCAGAAGAAATCAAAGGTTTGTTACTAAGTTTTGAGGATGAGTCAGGTAAGTGTTGGAGGTTCCGGTATTCATATTGGAACAGTAGTCAAAGCTATGTTCTTACAAAAGGTTGGAGTCGTTATGTTAAAGATAAACGTCTTGATGCTGGTGATGTTGTTTTGTTTCAAAGACACCGTGTACATCCTCAACGGTTGTTTATCTCGTGGAGGCGCCGCCATGGTAGTGACTCTACTCCACCGGCTCATGTTAGCAGATCCATCTGTAGTGATGGCAATGGGAATGGGAATAGCACTGTTCCTGTGGGGTGGTCCAGAGAACTCTATCCTGCGCATCCTTATCCTACTCATCATCATCCCTTGTCATACCATGCAGGTGAAGGGTCCCAAAGTCTGAACACAACCACACCTTGTGGAAATAGTTCGAGTACTTCCAGGGTGCTGAGGCTGTTTGGAGTGAACATGGAATGCCAACCTGATAATAATATTAATATTAACAATATTAATGATTCCCAAACTTTGTCACCAGATTGCTCTTATAATATGTCATCAACACAAGGCACAGCTATCCCACAATTCTACCACCACCTCCACCGTCAACCTCCTTCAAATCCTCACCATCACATGCTACGTCAACAACCATATTAG
Protein sequence

>Msa0981750

MSINHTIQETTSLWWNQQQQQQRTQQDAEEAELEDDVVLESIMKLKTTEASSEEEKEAMFEKPLTPSDVGKLNRLVIPKQHAERYFPLDSEEIKGLLLSFEDESGKCWRFRYSYWNSSQSYVLTKGWSRYVKDKRLDAGDVVLFQRHRVHPQRLFISWRRRHGSDSTPPAHVSRSICSDGNGNGNSTVPVGWSRELYPAHPYPTHHHPLSYHAGEGSQSLNTTTPCGNSSSTSRVLRLFGVNMECQPDNNININNINDSQTLSPDCSYNMSSTQGTAIPQFYHHLHRQPPSNPHHHMLRQQPY*