AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1080450

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1080450 MtrunA17_Chr7g0266821 90.554 307 20 5 1 303 1 302 1.01e-178 495
Msa1080450 MtrunA17_Chr1g0178071 56.637 339 85 14 11 303 6 328 6.41e-101 299
Msa1080450 MtrunA17_Chr8g0345771 66.667 129 40 2 36 161 148 276 7.16e-52 178
Msa1080450 MtrunA17_Chr7g0276471 73.585 106 25 2 59 161 117 222 6.39e-48 166
Msa1080450 MtrunA17_Chr5g0422501 61.667 120 37 1 51 161 227 346 1.21e-44 156
Msa1080450 MtrunA17_Chr1g0198661 57.143 126 40 1 50 161 182 307 2.45e-41 147
Msa1080450 MtrunA17_Chr1g0213701 55.319 94 32 2 57 146 159 246 9.15e-29 112
Msa1080450 MtrunA17_Chr4g0012861 40.541 111 59 5 59 166 314 420 1.56e-15 77.0
Msa1080450 MtrunA17_Chr5g0432721 36.296 135 71 7 59 184 321 449 1.67e-15 77.0
Msa1080450 MtrunA17_Chr2g0281191 37.190 121 69 5 43 160 336 452 4.03e-15 75.9
Msa1080450 MtrunA17_Chr7g0244871 44.318 88 45 3 59 144 12 97 1.07e-14 68.9
Msa1080450 MtrunA17_Chr3g0107701 36.170 141 78 6 59 191 338 474 4.28e-14 72.8
Msa1080450 MtrunA17_Chr8g0389081 34.848 132 77 4 31 160 112 236 5.75e-14 72.4
Msa1080450 MtrunA17_Chr1g0199681 40.000 95 55 2 54 146 187 281 1.07e-12 68.6
Msa1080450 MtrunA17_Chr3g0115271 33.083 133 78 5 51 179 108 233 3.32e-12 67.0
Msa1080450 MtrunA17_Chr2g0326761 36.842 114 68 3 49 160 97 208 3.44e-12 67.0
Msa1080450 MtrunA17_Chr2g0282961 33.813 139 84 3 20 156 124 256 6.64e-12 65.9
Msa1080450 MtrunA17_Chr4g0070181 34.884 129 75 4 34 160 105 226 1.02e-11 65.9
Msa1080450 MtrunA17_Chr2g0301251 34.884 129 75 4 34 160 105 226 1.77e-11 65.1
Msa1080450 MtrunA17_Chr4g0046371 36.937 111 68 2 48 156 136 246 5.40e-11 63.2
Msa1080450 MtrunA17_Chr5g0417281 34.615 104 66 2 45 146 98 201 9.28e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1080450 AT5G06250.5 44.599 287 115 8 1 268 1 262 7.35e-69 215
Msa1080450 AT5G06250.4 45.070 284 112 8 1 265 1 259 3.46e-68 214
Msa1080450 AT5G06250.2 45.070 284 112 8 1 265 1 259 3.87e-68 214
Msa1080450 AT5G06250.3 43.902 287 96 7 1 265 1 244 5.09e-65 205
Msa1080450 AT5G06250.1 43.902 287 96 7 1 265 1 244 5.51e-65 205
Msa1080450 AT3G11580.1 52.404 208 79 5 55 248 24 225 1.03e-61 197
Msa1080450 AT2G36080.3 56.219 201 49 5 54 250 32 197 1.51e-61 195
Msa1080450 AT2G36080.1 56.219 201 49 5 54 250 32 197 1.79e-61 196
Msa1080450 AT3G11580.3 52.404 208 79 5 55 248 24 225 6.40e-61 198
Msa1080450 AT2G36080.4 80.357 112 18 1 54 161 32 143 2.09e-57 182
Msa1080450 AT2G36080.2 80.357 112 18 1 54 161 32 143 2.09e-57 182
Msa1080450 AT3G11580.4 73.109 119 20 1 55 161 24 142 4.22e-57 184
Msa1080450 AT3G11580.2 73.109 119 20 1 55 161 24 142 4.22e-57 184
Msa1080450 AT3G11580.5 73.109 119 20 1 55 161 24 142 4.22e-57 184
Msa1080450 AT3G61970.1 71.795 117 29 1 49 161 12 128 1.08e-53 177
Msa1080450 AT2G46870.1 66.929 127 37 3 40 161 14 140 8.03e-50 167
Msa1080450 AT1G01030.2 46.460 226 90 7 55 250 51 275 7.28e-49 166
Msa1080450 AT1G13260.1 69.369 111 32 1 57 165 185 295 1.30e-48 166
Msa1080450 AT1G01030.1 69.369 111 30 2 55 161 51 161 2.42e-46 160
Msa1080450 AT1G68840.2 60.630 127 47 1 56 179 184 310 8.19e-46 158
Msa1080450 AT1G68840.1 60.630 127 47 1 56 179 184 310 8.19e-46 158
Msa1080450 AT3G25730.1 62.832 113 38 1 57 165 180 292 3.18e-45 156
Msa1080450 AT4G01500.1 40.329 243 94 6 52 244 28 269 4.13e-42 148
Msa1080450 AT1G25560.1 57.812 128 41 2 56 174 191 314 4.39e-42 149
Msa1080450 AT1G51120.1 47.368 95 41 1 59 144 177 271 2.27e-24 101
Msa1080450 AT1G50680.1 45.918 98 41 1 59 144 156 253 1.66e-23 99.0
Msa1080450 AT4G32010.2 40.179 112 60 5 59 167 281 388 4.80e-15 75.9
Msa1080450 AT4G32010.1 40.179 112 60 5 59 167 285 392 5.27e-15 75.9
Msa1080450 AT2G30470.1 40.952 105 56 4 59 161 294 394 9.64e-15 75.1
Msa1080450 AT1G77850.1 35.455 110 67 2 53 160 112 219 6.35e-13 69.3
Msa1080450 AT1G77850.2 35.455 110 67 2 53 160 112 219 6.47e-13 69.3
Msa1080450 AT1G35240.1 37.931 116 69 3 60 173 126 240 2.55e-12 67.8
Msa1080450 AT2G28350.1 32.624 141 92 3 28 166 84 223 8.97e-12 66.2
Msa1080450 AT2G28350.2 32.624 141 92 3 28 166 84 223 9.50e-12 65.9
Msa1080450 AT1G35520.1 37.069 116 70 3 60 173 126 240 2.05e-11 65.1
Msa1080450 AT1G34310.1 36.207 116 71 3 60 173 126 240 2.53e-11 64.7

Find 99 sgRNAs with CRISPR-Local

Find 280 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTACGTCGCTTGGTGTTAA+TGG 0.127068 7_2:+79915874 None:intergenic
TTGATTGAATCTAGCTAATA+TGG 0.221602 7_2:+79914326 None:intergenic
TAATAATTAAAATTAATTAA+AGG 0.231030 7_2:+79914218 None:intergenic
AGCAATCTGGTGACAAAGTT+TGG 0.259112 7_2:+79914453 None:intergenic
TTAATATTTGCTTGATTGAT+AGG 0.259809 7_2:+79914019 None:intergenic
ATCTTTCTTGTCTTAAATTC+AGG 0.265779 7_2:-79914097 Msa1080450:three_prime_UTR
AATAATTAAAATTAATTAAA+GGG 0.270961 7_2:+79914219 None:intergenic
CTCAATTTATTAGTATATTT+AGG 0.273317 7_2:-79914142 Msa1080450:three_prime_UTR
ATTGAGAAAGGTTCCTTTCA+TGG 0.274144 7_2:+79914159 None:intergenic
TATCTCTCAGCATGTTGTTT+TGG 0.292618 7_2:+79915829 None:intergenic
ATTCAGGAGATGCATGTAAA+TGG 0.299023 7_2:-79914081 Msa1080450:three_prime_UTR
TCTTCTAAGCTTTAGGGTTA+AGG 0.311942 7_2:-79914245 Msa1080450:three_prime_UTR
GGAGGTTCCGGTATTCATAT+TGG 0.328744 7_2:-79915738 Msa1080450:CDS
TCCAGGGTGCTGAGGCTGTT+TGG 0.331988 7_2:-79914533 Msa1080450:CDS
TTAATATTAATATTATTATC+AGG 0.333871 7_2:+79914491 None:intergenic
CAGGTAAGTGTTGGAGGTTC+CGG 0.351251 7_2:-79915750 Msa1080450:CDS
TGTGGTTGTGTTCAGACTTT+GGG 0.375824 7_2:+79914580 None:intergenic
CAAAGCTATGTTCTTACAAA+AGG 0.401403 7_2:-79915706 Msa1080450:CDS
GAAATAGTTCGAGTACTTCC+AGG 0.409986 7_2:-79914550 Msa1080450:CDS
GAGGTTGACGGTGGAGGTGG+TGG 0.410580 7_2:+79914384 None:intergenic
TATTTCTCAAACAAAATTTG+AGG 0.414952 7_2:+79916093 None:intergenic
TTCAACTTCCCTACGTCGCT+TGG 0.425371 7_2:+79915865 None:intergenic
TTGAAGGAGGTTGACGGTGG+AGG 0.432392 7_2:+79914378 None:intergenic
TAATATTTGCTTGATTGATA+GGG 0.433944 7_2:+79914020 None:intergenic
GCAATCTGGTGACAAAGTTT+GGG 0.439412 7_2:+79914454 None:intergenic
AAGGAGGTTGACGGTGGAGG+TGG 0.440000 7_2:+79914381 None:intergenic
TGGAGGTGGTGGTAGAATTG+TGG 0.441638 7_2:+79914395 None:intergenic
TACAAGAAACAACATCACTA+TGG 0.450273 7_2:-79916041 Msa1080450:CDS
GGATGATGATGAGTAGGATA+AGG 0.453506 7_2:+79915460 None:intergenic
GTGTGGTTGTGTTCAGACTT+TGG 0.465958 7_2:+79914579 None:intergenic
AGGATGAGTCAGGTAAGTGT+TGG 0.475422 7_2:-79915759 Msa1080450:CDS
GCTATGTTCTTACAAAAGGT+TGG 0.477263 7_2:-79915702 Msa1080450:CDS
GAGGATTTGAAGGAGGTTGA+CGG 0.478467 7_2:+79914372 None:intergenic
TTTGAGGATTTGAAAGAGAG+AGG 0.480033 7_2:+79916109 None:intergenic
GGAGGTGGTGGTAGAATTGT+GGG 0.483601 7_2:+79914396 None:intergenic
TATTAATATTATTATCAGGT+TGG 0.493103 7_2:+79914495 None:intergenic
TGTAGTACGTGAGTGGTTGA+AGG 0.493128 7_2:+79916155 None:intergenic
TACTGTTCCAATATGAATAC+CGG 0.505382 7_2:+79915731 None:intergenic
TTGAGGATTTGAAAGAGAGA+GGG 0.513453 7_2:+79916110 None:intergenic
CCATCTGTAGTGATGGCAAT+GGG 0.515422 7_2:-79915537 Msa1080450:CDS
GACATATTATAAGAGCAATC+TGG 0.517703 7_2:+79914440 None:intergenic
ATGCGCAGGATAGAGTTCTC+TGG 0.519337 7_2:+79915483 None:intergenic
ATCTCGTGGAGGCGCCGCCA+TGG 0.519364 7_2:-79915595 Msa1080450:CDS
CCCATTGCCATCACTACAGA+TGG 0.522140 7_2:+79915537 None:intergenic
TGTAGTGATGGCAATGGGAA+TGG 0.522719 7_2:-79915532 Msa1080450:CDS
TTGATTTCTTCTGAGTCTAG+TGG 0.523246 7_2:+79915802 None:intergenic
ATGAGTCAGGTAAGTGTTGG+AGG 0.531766 7_2:-79915756 Msa1080450:CDS
TGATTTCTTCTGAGTCTAGT+GGG 0.531823 7_2:+79915803 None:intergenic
ATGTGATGGTGAGGATTTGA+AGG 0.538757 7_2:+79914362 None:intergenic
ATATACTAATAAATTGAGAA+AGG 0.542638 7_2:+79914147 None:intergenic
TGGGAATAGCACTGTTCCTG+TGG 0.547485 7_2:-79915512 Msa1080450:CDS
CCATTAACACCAAGCGACGT+AGG 0.548021 7_2:-79915874 Msa1080450:CDS
GAGAGGGTGTGAGAGAGAAG+TGG 0.554099 7_2:+79916126 None:intergenic
CATCCCTTGTCATACCATGC+AGG 0.555918 7_2:-79915442 Msa1080450:intron
AGCAGATCCATCTGTAGTGA+TGG 0.561002 7_2:-79915544 Msa1080450:CDS
CATTAACACCAAGCGACGTA+GGG 0.563833 7_2:-79915873 Msa1080450:CDS
ATAGCACTGTTCCTGTGGGG+TGG 0.568873 7_2:-79915507 Msa1080450:CDS
AAGAGAATCTAGTTAGGAGA+GGG 0.569754 7_2:+79914276 None:intergenic
TCCAAACAGCCTCAGCACCC+TGG 0.570047 7_2:+79914532 None:intergenic
AGTTCTCTGGACCACCCCAC+AGG 0.570942 7_2:+79915496 None:intergenic
AAAGAGAATCTAGTTAGGAG+AGG 0.571594 7_2:+79914275 None:intergenic
AAAGATAAACGTCTTGATGC+TGG 0.575473 7_2:-79915667 Msa1080450:CDS
ATGTTGTTTCTTGTATTGTG+TGG 0.576167 7_2:+79916049 None:intergenic
GTAGTGATGGCAATGGGAAT+GGG 0.579455 7_2:-79915531 Msa1080450:CDS
GATTTGAAGGAGGTTGACGG+TGG 0.580120 7_2:+79914375 None:intergenic
TGAGTAGGATAAGGATGCGC+AGG 0.580460 7_2:+79915469 None:intergenic
ATGGATCTGCTAACATGAGC+CGG 0.583256 7_2:+79915556 None:intergenic
CGAGTACTTCCAGGGTGCTG+AGG 0.583570 7_2:-79914541 Msa1080450:CDS
GACAAGGGATGATGATGAGT+AGG 0.585445 7_2:+79915454 None:intergenic
CTCAACGGTTGTTTATCTCG+TGG 0.587033 7_2:-79915609 Msa1080450:CDS
GAGGCTGTTTGGAGTGAACA+TGG 0.594809 7_2:-79914522 Msa1080450:CDS
TCCATCTGTAGTGATGGCAA+TGG 0.596273 7_2:-79915538 Msa1080450:CDS
GGGAATAGCACTGTTCCTGT+GGG 0.597826 7_2:-79915511 Msa1080450:CDS
CGAACTATTTCCACAAGGTG+TGG 0.598711 7_2:+79914562 None:intergenic
AGCTGAACTAGAAGATGATG+TGG 0.605647 7_2:-79915971 Msa1080450:CDS
ATGATCAACTGATCCATGAA+AGG 0.608959 7_2:-79914172 Msa1080450:three_prime_UTR
AAGAAACAACATCACTATGG+TGG 0.609594 7_2:-79916038 Msa1080450:CDS
CTAGACTCAGAAGAAATCAA+AGG 0.611927 7_2:-79915799 Msa1080450:CDS
GTTCACGTTGAAGATTGTAG+AGG 0.616609 7_2:-79914120 Msa1080450:three_prime_UTR
CTGAACACAACCACACCTTG+TGG 0.624852 7_2:-79914572 Msa1080450:CDS
AACGGTTGTTTATCTCGTGG+AGG 0.625722 7_2:-79915606 Msa1080450:CDS
GTTTGTTTGTAGTACGTGAG+TGG 0.627281 7_2:+79916148 None:intergenic
GTTGTTGACGTAGCATGTGA+TGG 0.636988 7_2:+79914348 None:intergenic
AAAACCTGCATGGTATGACA+AGG 0.637700 7_2:+79915438 None:intergenic
TGGTAGTGACTCTACTCCAC+CGG 0.642292 7_2:-79915575 Msa1080450:CDS
TGATGGTGAGGATTTGAAGG+AGG 0.642677 7_2:+79914365 None:intergenic
AAATAGTTCGAGTACTTCCA+GGG 0.668571 7_2:-79914549 Msa1080450:CDS
GTTGTAATGTGACAGGTGAA+GGG 0.678694 7_2:-79914604 Msa1080450:intron
TGACGTAGCATGTGATGGTG+AGG 0.679050 7_2:+79914353 None:intergenic
AAACCTGCATGGTATGACAA+GGG 0.685749 7_2:+79915439 None:intergenic
CACGAGATAAACAACCGTTG+AGG 0.688403 7_2:+79915610 None:intergenic
GACACCGTGTACATCCTCAA+CGG 0.690188 7_2:-79915624 Msa1080450:CDS
TATAATATGTCATCAACACA+AGG 0.697764 7_2:-79914428 Msa1080450:CDS
ACAACCGTTGAGGATGTACA+CGG 0.701448 7_2:+79915620 None:intergenic
GATCTGCTAACATGAGCCGG+TGG 0.708271 7_2:+79915559 None:intergenic
GGAATAGCACTGTTCCTGTG+GGG 0.714296 7_2:-79915510 Msa1080450:CDS
GTGGAGTAGAGTCACTACCA+TGG 0.731112 7_2:+79915578 None:intergenic
GTACTCGAACTATTTCCACA+AGG 0.735032 7_2:+79914557 None:intergenic
GAGTAGAGTCACTACCATGG+CGG 0.755745 7_2:+79915581 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATTAAAATTAATTAAA+GGG + chr7_2:79915984-79916003 None:intergenic 0.0%
!! TAATAATTAAAATTAATTAA+AGG + chr7_2:79915985-79916004 None:intergenic 0.0%
!! AATAATTAAAATTAATTAAA+GGG + chr7_2:79915984-79916003 None:intergenic 0.0%
!! TAATAATTAAAATTAATTAA+AGG + chr7_2:79915985-79916004 None:intergenic 0.0%
!!! ATATTCAATATTTTACTTAG+AGG - chr7_2:79914835-79914854 Msa1080450:intron 15.0%
!! TTTGCGTATTTATTTATTTA+TGG - chr7_2:79915523-79915542 Msa1080450:CDS 15.0%
!! TATTAATATTATTATCAGGT+TGG + chr7_2:79915708-79915727 None:intergenic 15.0%
!! ATATACTAATAAATTGAGAA+AGG + chr7_2:79916056-79916075 None:intergenic 15.0%
!! CTCAATTTATTAGTATATTT+AGG - chr7_2:79916058-79916077 Msa1080450:CDS 15.0%
!!! ATATTCAATATTTTACTTAG+AGG - chr7_2:79914835-79914854 Msa1080450:intron 15.0%
!! TTTGCGTATTTATTTATTTA+TGG - chr7_2:79915523-79915542 Msa1080450:CDS 15.0%
!! TATTAATATTATTATCAGGT+TGG + chr7_2:79915708-79915727 None:intergenic 15.0%
!! ATATACTAATAAATTGAGAA+AGG + chr7_2:79916056-79916075 None:intergenic 15.0%
!! CTCAATTTATTAGTATATTT+AGG - chr7_2:79916058-79916077 Msa1080450:CDS 15.0%
!! TATTTCTCAAACAAAATTTG+AGG + chr7_2:79914110-79914129 None:intergenic 20.0%
!! ATGTATATAAGAGATTATAG+TGG + chr7_2:79914795-79914814 None:intergenic 20.0%
!! ATTCTATTACAAATTTCAGA+TGG - chr7_2:79915187-79915206 Msa1080450:intron 20.0%
!! AAATTAAATTCAACAAAAGC+AGG + chr7_2:79915393-79915412 None:intergenic 20.0%
!! TTGAATTGAAAATGAATGTA+TGG - chr7_2:79915561-79915580 Msa1080450:CDS 20.0%
!! TGAATTGAAAATGAATGTAT+GGG - chr7_2:79915562-79915581 Msa1080450:CDS 20.0%
!! AAAAAAAAGAGAATCTAGTT+AGG + chr7_2:79915933-79915952 None:intergenic 20.0%
!!! TTTTTTTTCTTCTAAGCTTT+AGG - chr7_2:79915948-79915967 Msa1080450:CDS 20.0%
!!! TTTTTTTCTTCTAAGCTTTA+GGG - chr7_2:79915949-79915968 Msa1080450:CDS 20.0%
!! TATTTCTCAAACAAAATTTG+AGG + chr7_2:79914110-79914129 None:intergenic 20.0%
!! ATGTATATAAGAGATTATAG+TGG + chr7_2:79914795-79914814 None:intergenic 20.0%
!! ATTCTATTACAAATTTCAGA+TGG - chr7_2:79915187-79915206 Msa1080450:intron 20.0%
!! AAATTAAATTCAACAAAAGC+AGG + chr7_2:79915393-79915412 None:intergenic 20.0%
!! TTGAATTGAAAATGAATGTA+TGG - chr7_2:79915561-79915580 Msa1080450:CDS 20.0%
!! TGAATTGAAAATGAATGTAT+GGG - chr7_2:79915562-79915581 Msa1080450:CDS 20.0%
!! AAAAAAAAGAGAATCTAGTT+AGG + chr7_2:79915933-79915952 None:intergenic 20.0%
!!! TTTTTTTTCTTCTAAGCTTT+AGG - chr7_2:79915948-79915967 Msa1080450:CDS 20.0%
!!! TTTTTTTCTTCTAAGCTTTA+GGG - chr7_2:79915949-79915968 Msa1080450:CDS 20.0%
!!! TATAAGAGATTATAGTGGAT+AGG + chr7_2:79914790-79914809 None:intergenic 25.0%
! TATTAGACGATTGTTTATCA+CGG + chr7_2:79914895-79914914 None:intergenic 25.0%
! ATTGTTTAGACGAAAAGTTT+AGG + chr7_2:79914995-79915014 None:intergenic 25.0%
! TAGTAATTTGAATTTCCCAT+GGG - chr7_2:79915146-79915165 Msa1080450:intron 25.0%
! TATTACAAATTTCAGATGGA+TGG - chr7_2:79915191-79915210 Msa1080450:intron 25.0%
!! TTAACGTTTTCAACGTTAAA+AGG - chr7_2:79915431-79915450 Msa1080450:intron 25.0%
! TATAATATGTCATCAACACA+AGG - chr7_2:79915772-79915791 Msa1080450:CDS 25.0%
! TTGATTGAATCTAGCTAATA+TGG + chr7_2:79915877-79915896 None:intergenic 25.0%
! ATCTTTCTTGTCTTAAATTC+AGG - chr7_2:79916103-79916122 Msa1080450:five_prime_UTR 25.0%
!!! TATAAGAGATTATAGTGGAT+AGG + chr7_2:79914790-79914809 None:intergenic 25.0%
! TATTAGACGATTGTTTATCA+CGG + chr7_2:79914895-79914914 None:intergenic 25.0%
! ATTGTTTAGACGAAAAGTTT+AGG + chr7_2:79914995-79915014 None:intergenic 25.0%
! TAGTAATTTGAATTTCCCAT+GGG - chr7_2:79915146-79915165 Msa1080450:intron 25.0%
! TATTACAAATTTCAGATGGA+TGG - chr7_2:79915191-79915210 Msa1080450:intron 25.0%
!! TTAACGTTTTCAACGTTAAA+AGG - chr7_2:79915431-79915450 Msa1080450:intron 25.0%
! TATAATATGTCATCAACACA+AGG - chr7_2:79915772-79915791 Msa1080450:CDS 25.0%
! TTGATTGAATCTAGCTAATA+TGG + chr7_2:79915877-79915896 None:intergenic 25.0%
! ATCTTTCTTGTCTTAAATTC+AGG - chr7_2:79916103-79916122 Msa1080450:five_prime_UTR 25.0%
!! ATGTTGTTTCTTGTATTGTG+TGG + chr7_2:79914154-79914173 None:intergenic 30.0%
TACAAGAAACAACATCACTA+TGG - chr7_2:79914159-79914178 Msa1080450:three_prime_UTR 30.0%
!!! AGGTTTGTTACTAAGTTTTG+AGG - chr7_2:79914421-79914440 Msa1080450:CDS 30.0%
TACTGTTCCAATATGAATAC+CGG + chr7_2:79914472-79914491 None:intergenic 30.0%
CAAAGCTATGTTCTTACAAA+AGG - chr7_2:79914494-79914513 Msa1080450:CDS 30.0%
TTAGACGAAAAGTTTAGGAA+GGG + chr7_2:79914990-79915009 None:intergenic 30.0%
TTTAGACGAAAAGTTTAGGA+AGG + chr7_2:79914991-79915010 None:intergenic 30.0%
CTAGTAATTTGAATTTCCCA+TGG - chr7_2:79915145-79915164 Msa1080450:intron 30.0%
CTGACAATATATATACCCAT+GGG + chr7_2:79915164-79915183 None:intergenic 30.0%
ACTGACAATATATATACCCA+TGG + chr7_2:79915165-79915184 None:intergenic 30.0%
AAAACATACATGCAACACAA+TGG + chr7_2:79915218-79915237 None:intergenic 30.0%
GACATATTATAAGAGCAATC+TGG + chr7_2:79915763-79915782 None:intergenic 30.0%
!! ATGTTGTTTCTTGTATTGTG+TGG + chr7_2:79914154-79914173 None:intergenic 30.0%
TACAAGAAACAACATCACTA+TGG - chr7_2:79914159-79914178 Msa1080450:three_prime_UTR 30.0%
!!! AGGTTTGTTACTAAGTTTTG+AGG - chr7_2:79914421-79914440 Msa1080450:CDS 30.0%
TACTGTTCCAATATGAATAC+CGG + chr7_2:79914472-79914491 None:intergenic 30.0%
CAAAGCTATGTTCTTACAAA+AGG - chr7_2:79914494-79914513 Msa1080450:CDS 30.0%
TTAGACGAAAAGTTTAGGAA+GGG + chr7_2:79914990-79915009 None:intergenic 30.0%
TTTAGACGAAAAGTTTAGGA+AGG + chr7_2:79914991-79915010 None:intergenic 30.0%
CTAGTAATTTGAATTTCCCA+TGG - chr7_2:79915145-79915164 Msa1080450:intron 30.0%
CTGACAATATATATACCCAT+GGG + chr7_2:79915164-79915183 None:intergenic 30.0%
ACTGACAATATATATACCCA+TGG + chr7_2:79915165-79915184 None:intergenic 30.0%
AAAACATACATGCAACACAA+TGG + chr7_2:79915218-79915237 None:intergenic 30.0%
GACATATTATAAGAGCAATC+TGG + chr7_2:79915763-79915782 None:intergenic 30.0%
TTGAGGATTTGAAAGAGAGA+GGG + chr7_2:79914093-79914112 None:intergenic 35.0%
TTTGAGGATTTGAAAGAGAG+AGG + chr7_2:79914094-79914113 None:intergenic 35.0%
AAGAAACAACATCACTATGG+TGG - chr7_2:79914162-79914181 Msa1080450:three_prime_UTR 35.0%
!!! GTTGTTTTGGAATAACGAGT+CGG + chr7_2:79914361-79914380 None:intergenic 35.0%
!! TATCTCTCAGCATGTTGTTT+TGG + chr7_2:79914374-79914393 None:intergenic 35.0%
TGATTTCTTCTGAGTCTAGT+GGG + chr7_2:79914400-79914419 None:intergenic 35.0%
TTGATTTCTTCTGAGTCTAG+TGG + chr7_2:79914401-79914420 None:intergenic 35.0%
CTAGACTCAGAAGAAATCAA+AGG - chr7_2:79914401-79914420 Msa1080450:CDS 35.0%
GCTATGTTCTTACAAAAGGT+TGG - chr7_2:79914498-79914517 Msa1080450:CDS 35.0%
AAAGATAAACGTCTTGATGC+TGG - chr7_2:79914533-79914552 Msa1080450:CDS 35.0%
AAGGGTAACTTCCAGTTATT+TGG - chr7_2:79915277-79915296 Msa1080450:intron 35.0%
AGGGTAACTTCCAGTTATTT+GGG - chr7_2:79915278-79915297 Msa1080450:intron 35.0%
ATAATGTGACCTAAAGTGTG+TGG - chr7_2:79915350-79915369 Msa1080450:intron 35.0%
TTTCAACGTTAAAAGGTTGC+AGG - chr7_2:79915438-79915457 Msa1080450:intron 35.0%
! TGTTTGTTTCTTTCGCTTGT+TGG - chr7_2:79915472-79915491 Msa1080450:CDS 35.0%
! GTTTGTTTCTTTCGCTTGTT+GGG - chr7_2:79915473-79915492 Msa1080450:CDS 35.0%
AAATAGTTCGAGTACTTCCA+GGG - chr7_2:79915651-79915670 Msa1080450:CDS 35.0%
AAGAGAATCTAGTTAGGAGA+GGG + chr7_2:79915927-79915946 None:intergenic 35.0%
AAAGAGAATCTAGTTAGGAG+AGG + chr7_2:79915928-79915947 None:intergenic 35.0%
!! TCTTCTAAGCTTTAGGGTTA+AGG - chr7_2:79915955-79915974 Msa1080450:CDS 35.0%
ATGATCAACTGATCCATGAA+AGG - chr7_2:79916028-79916047 Msa1080450:CDS 35.0%
ATTGAGAAAGGTTCCTTTCA+TGG + chr7_2:79916044-79916063 None:intergenic 35.0%
ATTCAGGAGATGCATGTAAA+TGG - chr7_2:79916119-79916138 Msa1080450:five_prime_UTR 35.0%
TTGAGGATTTGAAAGAGAGA+GGG + chr7_2:79914093-79914112 None:intergenic 35.0%
TTTGAGGATTTGAAAGAGAG+AGG + chr7_2:79914094-79914113 None:intergenic 35.0%
AAGAAACAACATCACTATGG+TGG - chr7_2:79914162-79914181 Msa1080450:three_prime_UTR 35.0%
!!! GTTGTTTTGGAATAACGAGT+CGG + chr7_2:79914361-79914380 None:intergenic 35.0%
!! TATCTCTCAGCATGTTGTTT+TGG + chr7_2:79914374-79914393 None:intergenic 35.0%
TGATTTCTTCTGAGTCTAGT+GGG + chr7_2:79914400-79914419 None:intergenic 35.0%
TTGATTTCTTCTGAGTCTAG+TGG + chr7_2:79914401-79914420 None:intergenic 35.0%
CTAGACTCAGAAGAAATCAA+AGG - chr7_2:79914401-79914420 Msa1080450:CDS 35.0%
GCTATGTTCTTACAAAAGGT+TGG - chr7_2:79914498-79914517 Msa1080450:CDS 35.0%
AAAGATAAACGTCTTGATGC+TGG - chr7_2:79914533-79914552 Msa1080450:CDS 35.0%
AAGGGTAACTTCCAGTTATT+TGG - chr7_2:79915277-79915296 Msa1080450:intron 35.0%
AGGGTAACTTCCAGTTATTT+GGG - chr7_2:79915278-79915297 Msa1080450:intron 35.0%
ATAATGTGACCTAAAGTGTG+TGG - chr7_2:79915350-79915369 Msa1080450:intron 35.0%
TTTCAACGTTAAAAGGTTGC+AGG - chr7_2:79915438-79915457 Msa1080450:intron 35.0%
! TGTTTGTTTCTTTCGCTTGT+TGG - chr7_2:79915472-79915491 Msa1080450:CDS 35.0%
! GTTTGTTTCTTTCGCTTGTT+GGG - chr7_2:79915473-79915492 Msa1080450:CDS 35.0%
AAATAGTTCGAGTACTTCCA+GGG - chr7_2:79915651-79915670 Msa1080450:CDS 35.0%
AAGAGAATCTAGTTAGGAGA+GGG + chr7_2:79915927-79915946 None:intergenic 35.0%
AAAGAGAATCTAGTTAGGAG+AGG + chr7_2:79915928-79915947 None:intergenic 35.0%
!! TCTTCTAAGCTTTAGGGTTA+AGG - chr7_2:79915955-79915974 Msa1080450:CDS 35.0%
ATGATCAACTGATCCATGAA+AGG - chr7_2:79916028-79916047 Msa1080450:CDS 35.0%
ATTGAGAAAGGTTCCTTTCA+TGG + chr7_2:79916044-79916063 None:intergenic 35.0%
ATTCAGGAGATGCATGTAAA+TGG - chr7_2:79916119-79916138 Msa1080450:five_prime_UTR 35.0%
GTTTGTTTGTAGTACGTGAG+TGG + chr7_2:79914055-79914074 None:intergenic 40.0%
AGCTGAACTAGAAGATGATG+TGG - chr7_2:79914229-79914248 Msa1080450:three_prime_UTR 40.0%
!!! CTAAGTTTTGAGGATGAGTC+AGG - chr7_2:79914431-79914450 Msa1080450:CDS 40.0%
! GGATGATGATGAGTAGGATA+AGG + chr7_2:79914743-79914762 None:intergenic 40.0%
AAACCTGCATGGTATGACAA+GGG + chr7_2:79914764-79914783 None:intergenic 40.0%
AAAACCTGCATGGTATGACA+AGG + chr7_2:79914765-79914784 None:intergenic 40.0%
TGGATAGGTAAAAACCTGCA+TGG + chr7_2:79914775-79914794 None:intergenic 40.0%
CTAATTACTCGTGCACTATG+TGG + chr7_2:79915044-79915063 None:intergenic 40.0%
! ACTTCCAGTTATTTGGGACT+TGG - chr7_2:79915284-79915303 Msa1080450:intron 40.0%
TGTTGTAATGTGACAGGTGA+AGG - chr7_2:79915595-79915614 Msa1080450:CDS 40.0%
GTTGTAATGTGACAGGTGAA+GGG - chr7_2:79915596-79915615 Msa1080450:CDS 40.0%
TGTGGTTGTGTTCAGACTTT+GGG + chr7_2:79915623-79915642 None:intergenic 40.0%
GTACTCGAACTATTTCCACA+AGG + chr7_2:79915646-79915665 None:intergenic 40.0%
GAAATAGTTCGAGTACTTCC+AGG - chr7_2:79915650-79915669 Msa1080450:CDS 40.0%
GCAATCTGGTGACAAAGTTT+GGG + chr7_2:79915749-79915768 None:intergenic 40.0%
AGCAATCTGGTGACAAAGTT+TGG + chr7_2:79915750-79915769 None:intergenic 40.0%
! ATGTGATGGTGAGGATTTGA+AGG + chr7_2:79915841-79915860 None:intergenic 40.0%
GTTCACGTTGAAGATTGTAG+AGG - chr7_2:79916080-79916099 Msa1080450:exon 40.0%
GTTTGTTTGTAGTACGTGAG+TGG + chr7_2:79914055-79914074 None:intergenic 40.0%
AGCTGAACTAGAAGATGATG+TGG - chr7_2:79914229-79914248 Msa1080450:three_prime_UTR 40.0%
!!! CTAAGTTTTGAGGATGAGTC+AGG - chr7_2:79914431-79914450 Msa1080450:CDS 40.0%
! GGATGATGATGAGTAGGATA+AGG + chr7_2:79914743-79914762 None:intergenic 40.0%
AAACCTGCATGGTATGACAA+GGG + chr7_2:79914764-79914783 None:intergenic 40.0%
AAAACCTGCATGGTATGACA+AGG + chr7_2:79914765-79914784 None:intergenic 40.0%
TGGATAGGTAAAAACCTGCA+TGG + chr7_2:79914775-79914794 None:intergenic 40.0%
CTAATTACTCGTGCACTATG+TGG + chr7_2:79915044-79915063 None:intergenic 40.0%
! ACTTCCAGTTATTTGGGACT+TGG - chr7_2:79915284-79915303 Msa1080450:intron 40.0%
TGTTGTAATGTGACAGGTGA+AGG - chr7_2:79915595-79915614 Msa1080450:CDS 40.0%
GTTGTAATGTGACAGGTGAA+GGG - chr7_2:79915596-79915615 Msa1080450:CDS 40.0%
TGTGGTTGTGTTCAGACTTT+GGG + chr7_2:79915623-79915642 None:intergenic 40.0%
GTACTCGAACTATTTCCACA+AGG + chr7_2:79915646-79915665 None:intergenic 40.0%
GAAATAGTTCGAGTACTTCC+AGG - chr7_2:79915650-79915669 Msa1080450:CDS 40.0%
GCAATCTGGTGACAAAGTTT+GGG + chr7_2:79915749-79915768 None:intergenic 40.0%
AGCAATCTGGTGACAAAGTT+TGG + chr7_2:79915750-79915769 None:intergenic 40.0%
! ATGTGATGGTGAGGATTTGA+AGG + chr7_2:79915841-79915860 None:intergenic 40.0%
GTTCACGTTGAAGATTGTAG+AGG - chr7_2:79916080-79916099 Msa1080450:exon 40.0%
TGTAGTACGTGAGTGGTTGA+AGG + chr7_2:79914048-79914067 None:intergenic 45.0%
CATTAACACCAAGCGACGTA+GGG - chr7_2:79914327-79914346 Msa1080450:exon 45.0%
AGGATGAGTCAGGTAAGTGT+TGG - chr7_2:79914441-79914460 Msa1080450:CDS 45.0%
!! ATGAGTCAGGTAAGTGTTGG+AGG - chr7_2:79914444-79914463 Msa1080450:CDS 45.0%
GGAGGTTCCGGTATTCATAT+TGG - chr7_2:79914462-79914481 Msa1080450:CDS 45.0%
ACAACCGTTGAGGATGTACA+CGG + chr7_2:79914583-79914602 None:intergenic 45.0%
CACGAGATAAACAACCGTTG+AGG + chr7_2:79914593-79914612 None:intergenic 45.0%
CTCAACGGTTGTTTATCTCG+TGG - chr7_2:79914591-79914610 Msa1080450:CDS 45.0%
AACGGTTGTTTATCTCGTGG+AGG - chr7_2:79914594-79914613 Msa1080450:intron 45.0%
ATGGATCTGCTAACATGAGC+CGG + chr7_2:79914647-79914666 None:intergenic 45.0%
AGCAGATCCATCTGTAGTGA+TGG - chr7_2:79914656-79914675 Msa1080450:intron 45.0%
TCCATCTGTAGTGATGGCAA+TGG - chr7_2:79914662-79914681 Msa1080450:intron 45.0%
CCATCTGTAGTGATGGCAAT+GGG - chr7_2:79914663-79914682 Msa1080450:intron 45.0%
TGTAGTGATGGCAATGGGAA+TGG - chr7_2:79914668-79914687 Msa1080450:intron 45.0%
GTAGTGATGGCAATGGGAAT+GGG - chr7_2:79914669-79914688 Msa1080450:intron 45.0%
! GACAAGGGATGATGATGAGT+AGG + chr7_2:79914749-79914768 None:intergenic 45.0%
! TCCAGTTATTTGGGACTTGG+AGG - chr7_2:79915287-79915306 Msa1080450:intron 45.0%
TCCTCCAAGTCCCAAATAAC+TGG + chr7_2:79915291-79915310 None:intergenic 45.0%
! ATTTGGGACTTGGAGGAATG+AGG - chr7_2:79915294-79915313 Msa1080450:intron 45.0%
TGCACGTGTTGTAATGTGAC+AGG - chr7_2:79915589-79915608 Msa1080450:CDS 45.0%
GTGTGGTTGTGTTCAGACTT+TGG + chr7_2:79915624-79915643 None:intergenic 45.0%
CGAACTATTTCCACAAGGTG+TGG + chr7_2:79915641-79915660 None:intergenic 45.0%
GAGGATTTGAAGGAGGTTGA+CGG + chr7_2:79915831-79915850 None:intergenic 45.0%
! TGATGGTGAGGATTTGAAGG+AGG + chr7_2:79915838-79915857 None:intergenic 45.0%
GTTGTTGACGTAGCATGTGA+TGG + chr7_2:79915855-79915874 None:intergenic 45.0%
TGTAGTACGTGAGTGGTTGA+AGG + chr7_2:79914048-79914067 None:intergenic 45.0%
CATTAACACCAAGCGACGTA+GGG - chr7_2:79914327-79914346 Msa1080450:exon 45.0%
AGGATGAGTCAGGTAAGTGT+TGG - chr7_2:79914441-79914460 Msa1080450:CDS 45.0%
!! ATGAGTCAGGTAAGTGTTGG+AGG - chr7_2:79914444-79914463 Msa1080450:CDS 45.0%
GGAGGTTCCGGTATTCATAT+TGG - chr7_2:79914462-79914481 Msa1080450:CDS 45.0%
ACAACCGTTGAGGATGTACA+CGG + chr7_2:79914583-79914602 None:intergenic 45.0%
CACGAGATAAACAACCGTTG+AGG + chr7_2:79914593-79914612 None:intergenic 45.0%
CTCAACGGTTGTTTATCTCG+TGG - chr7_2:79914591-79914610 Msa1080450:CDS 45.0%
AACGGTTGTTTATCTCGTGG+AGG - chr7_2:79914594-79914613 Msa1080450:intron 45.0%
ATGGATCTGCTAACATGAGC+CGG + chr7_2:79914647-79914666 None:intergenic 45.0%
AGCAGATCCATCTGTAGTGA+TGG - chr7_2:79914656-79914675 Msa1080450:intron 45.0%
TCCATCTGTAGTGATGGCAA+TGG - chr7_2:79914662-79914681 Msa1080450:intron 45.0%
CCATCTGTAGTGATGGCAAT+GGG - chr7_2:79914663-79914682 Msa1080450:intron 45.0%
TGTAGTGATGGCAATGGGAA+TGG - chr7_2:79914668-79914687 Msa1080450:intron 45.0%
GTAGTGATGGCAATGGGAAT+GGG - chr7_2:79914669-79914688 Msa1080450:intron 45.0%
! GACAAGGGATGATGATGAGT+AGG + chr7_2:79914749-79914768 None:intergenic 45.0%
! TCCAGTTATTTGGGACTTGG+AGG - chr7_2:79915287-79915306 Msa1080450:intron 45.0%
TCCTCCAAGTCCCAAATAAC+TGG + chr7_2:79915291-79915310 None:intergenic 45.0%
! ATTTGGGACTTGGAGGAATG+AGG - chr7_2:79915294-79915313 Msa1080450:intron 45.0%
TGCACGTGTTGTAATGTGAC+AGG - chr7_2:79915589-79915608 Msa1080450:CDS 45.0%
GTGTGGTTGTGTTCAGACTT+TGG + chr7_2:79915624-79915643 None:intergenic 45.0%
CGAACTATTTCCACAAGGTG+TGG + chr7_2:79915641-79915660 None:intergenic 45.0%
GAGGATTTGAAGGAGGTTGA+CGG + chr7_2:79915831-79915850 None:intergenic 45.0%
! TGATGGTGAGGATTTGAAGG+AGG + chr7_2:79915838-79915857 None:intergenic 45.0%
GTTGTTGACGTAGCATGTGA+TGG + chr7_2:79915855-79915874 None:intergenic 45.0%
!!! TATTTTATTCTTTTAAATAA+AGG - chr7_2:79915258-79915277 Msa1080450:intron 5.0%
!!! ATTTTATTCTTTTAAATAAA+GGG - chr7_2:79915259-79915278 Msa1080450:intron 5.0%
!! TTAATATTAATATTATTATC+AGG + chr7_2:79915712-79915731 None:intergenic 5.0%
!!! TATTTTATTCTTTTAAATAA+AGG - chr7_2:79915258-79915277 Msa1080450:intron 5.0%
!!! ATTTTATTCTTTTAAATAAA+GGG - chr7_2:79915259-79915278 Msa1080450:intron 5.0%
!! TTAATATTAATATTATTATC+AGG + chr7_2:79915712-79915731 None:intergenic 5.0%
!! CCTACGTCGCTTGGTGTTAA+TGG + chr7_2:79914329-79914348 None:intergenic 50.0%
CCATTAACACCAAGCGACGT+AGG - chr7_2:79914326-79914345 Msa1080450:exon 50.0%
TTCAACTTCCCTACGTCGCT+TGG + chr7_2:79914338-79914357 None:intergenic 50.0%
!! CAGGTAAGTGTTGGAGGTTC+CGG - chr7_2:79914450-79914469 Msa1080450:CDS 50.0%
GACACCGTGTACATCCTCAA+CGG - chr7_2:79914576-79914595 Msa1080450:CDS 50.0%
GAGTAGAGTCACTACCATGG+CGG + chr7_2:79914622-79914641 None:intergenic 50.0%
GTGGAGTAGAGTCACTACCA+TGG + chr7_2:79914625-79914644 None:intergenic 50.0%
! TGGTAGTGACTCTACTCCAC+CGG - chr7_2:79914625-79914644 Msa1080450:intron 50.0%
CCCATTGCCATCACTACAGA+TGG + chr7_2:79914666-79914685 None:intergenic 50.0%
TGGGAATAGCACTGTTCCTG+TGG - chr7_2:79914688-79914707 Msa1080450:intron 50.0%
GGGAATAGCACTGTTCCTGT+GGG - chr7_2:79914689-79914708 Msa1080450:intron 50.0%
GGAATAGCACTGTTCCTGTG+GGG - chr7_2:79914690-79914709 Msa1080450:intron 50.0%
ATGCGCAGGATAGAGTTCTC+TGG + chr7_2:79914720-79914739 None:intergenic 50.0%
TGAGTAGGATAAGGATGCGC+AGG + chr7_2:79914734-79914753 None:intergenic 50.0%
CATCCCTTGTCATACCATGC+AGG - chr7_2:79914758-79914777 Msa1080450:intron 50.0%
CTGAACACAACCACACCTTG+TGG - chr7_2:79915628-79915647 Msa1080450:CDS 50.0%
! GAGGCTGTTTGGAGTGAACA+TGG - chr7_2:79915678-79915697 Msa1080450:CDS 50.0%
! GGAGGTGGTGGTAGAATTGT+GGG + chr7_2:79915807-79915826 None:intergenic 50.0%
! TGGAGGTGGTGGTAGAATTG+TGG + chr7_2:79915808-79915827 None:intergenic 50.0%
GATTTGAAGGAGGTTGACGG+TGG + chr7_2:79915828-79915847 None:intergenic 50.0%
! TGACGTAGCATGTGATGGTG+AGG + chr7_2:79915850-79915869 None:intergenic 50.0%
!! CCTACGTCGCTTGGTGTTAA+TGG + chr7_2:79914329-79914348 None:intergenic 50.0%
CCATTAACACCAAGCGACGT+AGG - chr7_2:79914326-79914345 Msa1080450:exon 50.0%
TTCAACTTCCCTACGTCGCT+TGG + chr7_2:79914338-79914357 None:intergenic 50.0%
!! CAGGTAAGTGTTGGAGGTTC+CGG - chr7_2:79914450-79914469 Msa1080450:CDS 50.0%
GACACCGTGTACATCCTCAA+CGG - chr7_2:79914576-79914595 Msa1080450:CDS 50.0%
GAGTAGAGTCACTACCATGG+CGG + chr7_2:79914622-79914641 None:intergenic 50.0%
GTGGAGTAGAGTCACTACCA+TGG + chr7_2:79914625-79914644 None:intergenic 50.0%
! TGGTAGTGACTCTACTCCAC+CGG - chr7_2:79914625-79914644 Msa1080450:intron 50.0%
CCCATTGCCATCACTACAGA+TGG + chr7_2:79914666-79914685 None:intergenic 50.0%
TGGGAATAGCACTGTTCCTG+TGG - chr7_2:79914688-79914707 Msa1080450:intron 50.0%
GGGAATAGCACTGTTCCTGT+GGG - chr7_2:79914689-79914708 Msa1080450:intron 50.0%
GGAATAGCACTGTTCCTGTG+GGG - chr7_2:79914690-79914709 Msa1080450:intron 50.0%
ATGCGCAGGATAGAGTTCTC+TGG + chr7_2:79914720-79914739 None:intergenic 50.0%
TGAGTAGGATAAGGATGCGC+AGG + chr7_2:79914734-79914753 None:intergenic 50.0%
CATCCCTTGTCATACCATGC+AGG - chr7_2:79914758-79914777 Msa1080450:intron 50.0%
CTGAACACAACCACACCTTG+TGG - chr7_2:79915628-79915647 Msa1080450:CDS 50.0%
! GAGGCTGTTTGGAGTGAACA+TGG - chr7_2:79915678-79915697 Msa1080450:CDS 50.0%
! GGAGGTGGTGGTAGAATTGT+GGG + chr7_2:79915807-79915826 None:intergenic 50.0%
! TGGAGGTGGTGGTAGAATTG+TGG + chr7_2:79915808-79915827 None:intergenic 50.0%
GATTTGAAGGAGGTTGACGG+TGG + chr7_2:79915828-79915847 None:intergenic 50.0%
! TGACGTAGCATGTGATGGTG+AGG + chr7_2:79915850-79915869 None:intergenic 50.0%
! GAGAGGGTGTGAGAGAGAAG+TGG + chr7_2:79914077-79914096 None:intergenic 55.0%
GATCTGCTAACATGAGCCGG+TGG + chr7_2:79914644-79914663 None:intergenic 55.0%
ATAGCACTGTTCCTGTGGGG+TGG - chr7_2:79914693-79914712 Msa1080450:intron 55.0%
GGCTTCACGCCACACACTTT+AGG + chr7_2:79915362-79915381 None:intergenic 55.0%
TTGAAGGAGGTTGACGGTGG+AGG + chr7_2:79915825-79915844 None:intergenic 55.0%
! GAGAGGGTGTGAGAGAGAAG+TGG + chr7_2:79914077-79914096 None:intergenic 55.0%
GATCTGCTAACATGAGCCGG+TGG + chr7_2:79914644-79914663 None:intergenic 55.0%
ATAGCACTGTTCCTGTGGGG+TGG - chr7_2:79914693-79914712 Msa1080450:intron 55.0%
GGCTTCACGCCACACACTTT+AGG + chr7_2:79915362-79915381 None:intergenic 55.0%
TTGAAGGAGGTTGACGGTGG+AGG + chr7_2:79915825-79915844 None:intergenic 55.0%
AGTTCTCTGGACCACCCCAC+AGG + chr7_2:79914707-79914726 None:intergenic 60.0%
CAACAAAAGCAGGCGCGCGT+AGG + chr7_2:79915383-79915402 None:intergenic 60.0%
!! CGAGTACTTCCAGGGTGCTG+AGG - chr7_2:79915659-79915678 Msa1080450:CDS 60.0%
!! TCCAGGGTGCTGAGGCTGTT+TGG - chr7_2:79915667-79915686 Msa1080450:CDS 60.0%
TCCAAACAGCCTCAGCACCC+TGG + chr7_2:79915671-79915690 None:intergenic 60.0%
AAGGAGGTTGACGGTGGAGG+TGG + chr7_2:79915822-79915841 None:intergenic 60.0%
AGTTCTCTGGACCACCCCAC+AGG + chr7_2:79914707-79914726 None:intergenic 60.0%
CAACAAAAGCAGGCGCGCGT+AGG + chr7_2:79915383-79915402 None:intergenic 60.0%
!! CGAGTACTTCCAGGGTGCTG+AGG - chr7_2:79915659-79915678 Msa1080450:CDS 60.0%
!! TCCAGGGTGCTGAGGCTGTT+TGG - chr7_2:79915667-79915686 Msa1080450:CDS 60.0%
TCCAAACAGCCTCAGCACCC+TGG + chr7_2:79915671-79915690 None:intergenic 60.0%
AAGGAGGTTGACGGTGGAGG+TGG + chr7_2:79915822-79915841 None:intergenic 60.0%
GAGGTTGACGGTGGAGGTGG+TGG + chr7_2:79915819-79915838 None:intergenic 65.0%
GAGGTTGACGGTGGAGGTGG+TGG + chr7_2:79915819-79915838 None:intergenic 65.0%
!! ATCTCGTGGAGGCGCCGCCA+TGG - chr7_2:79914605-79914624 Msa1080450:intron 70.0%
!! ATCTCGTGGAGGCGCCGCCA+TGG - chr7_2:79914605-79914624 Msa1080450:intron 70.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 79914024 79916198 79914024 ID=Msa1080450;Name=Msa1080450
chr7_2 mRNA 79914024 79916198 79914024 ID=Msa1080450-mRNA-1;Parent=Msa1080450;Name=Msa1080450-mRNA-1;_AED=0.01;_eAED=0.01;_QI=116|1|1|1|1|1|2|316|303
chr7_2 exon 79914024 79914611 79914024 ID=Msa1080450-mRNA-1:exon:20158;Parent=Msa1080450-mRNA-1
chr7_2 exon 79915443 79916198 79915443 ID=Msa1080450-mRNA-1:exon:20157;Parent=Msa1080450-mRNA-1
chr7_2 five_prime_UTR 79916083 79916198 79916083 ID=Msa1080450-mRNA-1:five_prime_utr;Parent=Msa1080450-mRNA-1
chr7_2 CDS 79915443 79916082 79915443 ID=Msa1080450-mRNA-1:cds;Parent=Msa1080450-mRNA-1
chr7_2 CDS 79914340 79914611 79914340 ID=Msa1080450-mRNA-1:cds;Parent=Msa1080450-mRNA-1
chr7_2 three_prime_UTR 79914024 79914339 79914024 ID=Msa1080450-mRNA-1:three_prime_utr;Parent=Msa1080450-mRNA-1
Gene Sequence

>Msa1080450

ATGTCAATAAACCACACAATACAAGAAACAACATCACTATGGTGGAATCAACAACAACAACAACAAAGAACTCAACAAGATGCAGAAGAAGCTGAACTAGAAGATGATGTGGTTTTAGAATCAATAATGAAACTAAAAACAACAGAAGCATCATCAGAAGAAGAGAAAGAAGCTATGTTCGAGAAACCATTAACACCAAGCGACGTAGGGAAGTTGAACCGACTCGTTATTCCAAAACAACATGCTGAGAGATATTTCCCACTAGACTCAGAAGAAATCAAAGGTTTGTTACTAAGTTTTGAGGATGAGTCAGGTAAGTGTTGGAGGTTCCGGTATTCATATTGGAACAGTAGTCAAAGCTATGTTCTTACAAAAGGTTGGAGTCGTTATGTTAAAGATAAACGTCTTGATGCTGGTGATGTTGTTTTGTTTCAAAGACACCGTGTACATCCTCAACGGTTGTTTATCTCGTGGAGGCGCCGCCATGGTAGTGACTCTACTCCACCGGCTCATGTTAGCAGATCCATCTGTAGTGATGGCAATGGGAATGGGAATAGCACTGTTCCTGTGGGGTGGTCCAGAGAACTCTATCCTGCGCATCCTTATCCTACTCATCATCATCCCTTGTCATACCATGCAGGTGAAGGGTCCCAAAGTCTGAACACAACCACACCTTGTGGAAATAGTTCGAGTACTTCCAGGGTGCTGAGGCTGTTTGGAGTGAACATGGAATGCCAACCTGATAATAATATTAATATTAACAATATTAATGATTCCCAAACTTTGTCACCAGATTGCTCTTATAATATGTCATCAACACAAGGCACAGCTATCCCACAATTCTACCACCACCTCCACCGTCAACCTCCTTCAAATCCTCACCATCACATGCTACGTCAACAACCATATTAG
Protein sequence

>Msa1080450

MSINHTIQETTSLWWNQQQQQQRTQQDAEEAELEDDVVLESIMKLKTTEASSEEEKEAMFEKPLTPSDVGKLNRLVIPKQHAERYFPLDSEEIKGLLLSFEDESGKCWRFRYSYWNSSQSYVLTKGWSRYVKDKRLDAGDVVLFQRHRVHPQRLFISWRRRHGSDSTPPAHVSRSICSDGNGNGNSTVPVGWSRELYPAHPYPTHHHPLSYHAGEGSQSLNTTTPCGNSSSTSRVLRLFGVNMECQPDNNININNINDSQTLSPDCSYNMSSTQGTAIPQFYHHLHRQPPSNPHHHMLRQQPY*