Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0351980 | XP_003598994.1 | 94.179 | 670 | 33 | 2 | 1 | 669 | 1 | 665 | 0.0 | 1267 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0351980 | G7IZA9 | 94.179 | 670 | 33 | 2 | 1 | 669 | 1 | 665 | 0.0 | 1267 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0020630 | Msa0351980 | 0.848716 | 5.133772e-60 | -8.615850e-47 |
| Msa0027540 | Msa0351980 | 0.802081 | 6.644388e-49 | -8.615850e-47 |
| Msa0030000 | Msa0351980 | 0.836517 | 8.934043e-57 | -8.615850e-47 |
| Msa0037820 | Msa0351980 | 0.807691 | 4.467292e-50 | -8.615850e-47 |
| Msa0038350 | Msa0351980 | -0.842845 | 2.015859e-58 | -8.615850e-47 |
| Msa0044710 | Msa0351980 | 0.801010 | 1.101631e-48 | -8.615850e-47 |
| Msa0075310 | Msa0351980 | 0.807512 | 4.875663e-50 | -8.615850e-47 |
| Msa0078660 | Msa0351980 | 0.805627 | 1.218416e-49 | -8.615850e-47 |
| Msa0079650 | Msa0351980 | 0.812921 | 3.324577e-51 | -8.615850e-47 |
| Msa0085870 | Msa0351980 | 0.808486 | 3.025444e-50 | -8.615850e-47 |
| Msa0087110 | Msa0351980 | 0.807695 | 4.457857e-50 | -8.615850e-47 |
| Msa0090040 | Msa0351980 | -0.804065 | 2.582813e-49 | -8.615850e-47 |
| Msa0091770 | Msa0351980 | 0.862076 | 6.544154e-64 | -8.615850e-47 |
| Msa0094100 | Msa0351980 | 0.801340 | 9.429597e-49 | -8.615850e-47 |
| Msa0111310 | Msa0351980 | 0.822304 | 2.545383e-53 | -8.615850e-47 |
| Msa0114250 | Msa0351980 | 0.844527 | 7.155669e-59 | -8.615850e-47 |
| Msa0125230 | Msa0351980 | 0.824107 | 9.653121e-54 | -8.615850e-47 |
| Msa0130800 | Msa0351980 | 0.814217 | 1.724077e-51 | -8.615850e-47 |
| Msa0149500 | Msa0351980 | 0.808688 | 2.739121e-50 | -8.615850e-47 |
| Msa0156650 | Msa0351980 | -0.800751 | 1.244241e-48 | -8.615850e-47 |
| Msa0159750 | Msa0351980 | 0.844341 | 8.027684e-59 | -8.615850e-47 |
| Msa0168100 | Msa0351980 | 0.823576 | 1.285781e-53 | -8.615850e-47 |
| Msa0181410 | Msa0351980 | 0.833797 | 4.339181e-56 | -8.615850e-47 |
| Msa0185640 | Msa0351980 | -0.856393 | 3.317438e-62 | -8.615850e-47 |
| Msa0195770 | Msa0351980 | 0.808923 | 2.439619e-50 | -8.615850e-47 |
| Msa0198440 | Msa0351980 | 0.802417 | 5.665519e-49 | -8.615850e-47 |
| Msa0200950 | Msa0351980 | -0.806093 | 9.724294e-50 | -8.615850e-47 |
| Msa0207000 | Msa0351980 | 0.808639 | 2.805698e-50 | -8.615850e-47 |
| Msa0208390 | Msa0351980 | 0.804853 | 1.769618e-49 | -8.615850e-47 |
| Msa0223380 | Msa0351980 | 0.806853 | 6.722678e-50 | -8.615850e-47 |
| Msa0233190 | Msa0351980 | 0.804600 | 1.998577e-49 | -8.615850e-47 |
| Msa0252180 | Msa0351980 | 0.819255 | 1.278439e-52 | -8.615850e-47 |
| Msa0258670 | Msa0351980 | -0.822997 | 1.755227e-53 | -8.615850e-47 |
| Msa0264940 | Msa0351980 | -0.811384 | 7.192584e-51 | -8.615850e-47 |
| Msa0265210 | Msa0351980 | 0.815959 | 7.074697e-52 | -8.615850e-47 |
| Msa0265820 | Msa0351980 | 0.814474 | 1.512679e-51 | -8.615850e-47 |
| Msa0266000 | Msa0351980 | -0.806525 | 7.885508e-50 | -8.615850e-47 |
| Msa0269360 | Msa0351980 | 0.821294 | 4.359404e-53 | -8.615850e-47 |
| Msa0275670 | Msa0351980 | 0.809575 | 1.768449e-50 | -8.615850e-47 |
| Msa0288240 | Msa0351980 | 0.830060 | 3.632625e-55 | -8.615850e-47 |
| Msa0288330 | Msa0351980 | 0.871310 | 7.532276e-67 | -8.615850e-47 |
| Msa0296160 | Msa0351980 | 0.844891 | 5.707509e-59 | -8.615850e-47 |
| Msa0298940 | Msa0351980 | 0.824708 | 6.972198e-54 | -8.615850e-47 |
| Msa0302990 | Msa0351980 | -0.815407 | 9.390980e-52 | -8.615850e-47 |
| Msa0303200 | Msa0351980 | 0.802861 | 4.589693e-49 | -8.615850e-47 |
| Msa0304740 | Msa0351980 | 0.847404 | 1.181755e-59 | -8.615850e-47 |
| Msa0311580 | Msa0351980 | 0.805606 | 1.230713e-49 | -8.615850e-47 |
| Msa0325470 | Msa0351980 | 0.826826 | 2.192462e-54 | -8.615850e-47 |
| Msa0326670 | Msa0351980 | 0.830994 | 2.146432e-55 | -8.615850e-47 |
| Msa0327860 | Msa0351980 | 0.819172 | 1.335399e-52 | -8.615850e-47 |
| Msa0331590 | Msa0351980 | 0.833657 | 4.701457e-56 | -8.615850e-47 |
| Msa0334570 | Msa0351980 | 0.843338 | 1.490315e-58 | -8.615850e-47 |
| Msa0336270 | Msa0351980 | 0.821644 | 3.619420e-53 | -8.615850e-47 |
| Msa0342200 | Msa0351980 | 0.815341 | 9.717536e-52 | -8.615850e-47 |
| Msa0342340 | Msa0351980 | -0.860593 | 1.854029e-63 | -8.615850e-47 |
| Msa0351980 | Msa0371420 | -0.804578 | 2.019849e-49 | -8.615850e-47 |
| Msa0351980 | Msa0371570 | 0.808337 | 3.254438e-50 | -8.615850e-47 |
| Msa0351980 | Msa0376510 | 0.801106 | 1.052677e-48 | -8.615850e-47 |
| Msa0351980 | Msa0377280 | 0.831113 | 2.006044e-55 | -8.615850e-47 |
| Msa0351980 | Msa0389060 | 0.816368 | 5.733302e-52 | -8.615850e-47 |
| Msa0351980 | Msa0404690 | 0.831962 | 1.239528e-55 | -8.615850e-47 |
| Msa0351980 | Msa0413740 | 0.832694 | 8.165418e-56 | -8.615850e-47 |
| Msa0351980 | Msa0423360 | -0.809258 | 2.068078e-50 | -8.615850e-47 |
| Msa0351980 | Msa0425050 | 0.802376 | 5.778073e-49 | -8.615850e-47 |
| Msa0351980 | Msa0437710 | 0.811453 | 6.949801e-51 | -8.615850e-47 |
| Msa0351980 | Msa0442850 | 0.831716 | 1.425861e-55 | -8.615850e-47 |
| Msa0351980 | Msa0449590 | -0.822060 | 2.899295e-53 | -8.615850e-47 |
| Msa0351980 | Msa0458790 | 0.813075 | 3.074502e-51 | -8.615850e-47 |
| Msa0351980 | Msa0462590 | 0.834962 | 2.213126e-56 | -8.615850e-47 |
| Msa0351980 | Msa0465680 | -0.810152 | 1.328858e-50 | -8.615850e-47 |
| Msa0351980 | Msa0467900 | -0.804825 | 1.793308e-49 | -8.615850e-47 |
| Msa0351980 | Msa0467920 | -0.808943 | 2.415516e-50 | -8.615850e-47 |
| Msa0351980 | Msa0473240 | 0.813202 | 2.884312e-51 | -8.615850e-47 |
| Msa0351980 | Msa0480320 | 0.809495 | 1.839731e-50 | -8.615850e-47 |
| Msa0351980 | Msa0490350 | 0.820457 | 6.791912e-53 | -8.615850e-47 |
| Msa0351980 | Msa0505390 | 0.833675 | 4.653075e-56 | -8.615850e-47 |
| Msa0351980 | Msa0508200 | 0.810641 | 1.041959e-50 | -8.615850e-47 |
| Msa0351980 | Msa0509970 | 0.812768 | 3.590579e-51 | -8.615850e-47 |
| Msa0351980 | Msa0516450 | 0.812729 | 3.661952e-51 | -8.615850e-47 |
| Msa0351980 | Msa0524050 | 0.804199 | 2.422055e-49 | -8.615850e-47 |
| Msa0351980 | Msa0524120 | 0.804803 | 1.812970e-49 | -8.615850e-47 |
| Msa0351980 | Msa0524890 | -0.829171 | 5.975039e-55 | -8.615850e-47 |
| Msa0351980 | Msa0526640 | -0.819373 | 1.201882e-52 | -8.615850e-47 |
| Msa0351980 | Msa0530930 | 0.812917 | 3.330410e-51 | -8.615850e-47 |
| Msa0351980 | Msa0535060 | 0.804320 | 2.286190e-49 | -8.615850e-47 |
| Msa0351980 | Msa0540070 | 0.814499 | 1.493303e-51 | -8.615850e-47 |
| Msa0351980 | Msa0540320 | 0.857949 | 1.151434e-62 | -8.615850e-47 |
| Msa0351980 | Msa0566500 | -0.806557 | 7.763420e-50 | -8.615850e-47 |
| Msa0351980 | Msa0582110 | 0.862027 | 6.774470e-64 | -8.615850e-47 |
| Msa0351980 | Msa0589600 | 0.813538 | 2.433219e-51 | -8.615850e-47 |
| Msa0351980 | Msa0589640 | 0.829533 | 4.881281e-55 | -8.615850e-47 |
| Msa0351980 | Msa0596100 | 0.857789 | 1.284433e-62 | -8.615850e-47 |
| Msa0351980 | Msa0613480 | 0.800730 | 1.256613e-48 | -8.615850e-47 |
| Msa0351980 | Msa0621590 | 0.803019 | 4.257185e-49 | -8.615850e-47 |
| Msa0351980 | Msa0621890 | 0.822871 | 1.878829e-53 | -8.615850e-47 |
| Msa0351980 | Msa0624730 | 0.865848 | 4.384424e-65 | -8.615850e-47 |
| Msa0351980 | Msa0626230 | 0.821022 | 5.035432e-53 | -8.615850e-47 |
| Msa0351980 | Msa0630990 | 0.802889 | 4.527832e-49 | -8.615850e-47 |
| Msa0351980 | Msa0638280 | 0.833281 | 5.835518e-56 | -8.615850e-47 |
| Msa0351980 | Msa0638320 | 0.831354 | 1.750343e-55 | -8.615850e-47 |
| Msa0351980 | Msa0641450 | 0.807175 | 5.745717e-50 | -8.615850e-47 |
| Msa0351980 | Msa0647000 | 0.809763 | 1.611246e-50 | -8.615850e-47 |
| Msa0351980 | Msa0655660 | -0.801510 | 8.701281e-49 | -8.615850e-47 |
| Msa0351980 | Msa0657670 | 0.819598 | 1.067686e-52 | -8.615850e-47 |
| Msa0351980 | Msa0660880 | -0.844997 | 5.344344e-59 | -8.615850e-47 |
| Msa0351980 | Msa0662650 | 0.820033 | 8.491695e-53 | -8.615850e-47 |
| Msa0351980 | Msa0672120 | 0.806761 | 7.030272e-50 | -8.615850e-47 |
| Msa0351980 | Msa0674220 | 0.865427 | 5.951213e-65 | -8.615850e-47 |
| Msa0351980 | Msa0674300 | 0.821894 | 3.168129e-53 | -8.615850e-47 |
| Msa0351980 | Msa0677270 | 0.825913 | 3.616142e-54 | -8.615850e-47 |
| Msa0351980 | Msa0688550 | 0.809546 | 1.793966e-50 | -8.615850e-47 |
| Msa0351980 | Msa0708860 | 0.812713 | 3.690682e-51 | -8.615850e-47 |
| Msa0351980 | Msa0714600 | 0.809715 | 1.650232e-50 | -8.615850e-47 |
| Msa0351980 | Msa0716740 | -0.834292 | 3.260591e-56 | -8.615850e-47 |
| Msa0351980 | Msa0723140 | 0.807470 | 4.975677e-50 | -8.615850e-47 |
| Msa0351980 | Msa0735700 | 0.844315 | 8.155744e-59 | -8.615850e-47 |
| Msa0351980 | Msa0750380 | 0.815815 | 7.620232e-52 | -8.615850e-47 |
| Msa0351980 | Msa0757540 | -0.811275 | 7.595054e-51 | -8.615850e-47 |
| Msa0351980 | Msa0770430 | 0.812574 | 3.958613e-51 | -8.615850e-47 |
| Msa0351980 | Msa0778580 | 0.806942 | 6.438013e-50 | -8.615850e-47 |
| Msa0351980 | Msa0792510 | 0.818230 | 2.184148e-52 | -8.615850e-47 |
| Msa0351980 | Msa0799290 | -0.839501 | 1.526173e-57 | -8.615850e-47 |
| Msa0351980 | Msa0820670 | 0.802666 | 5.033363e-49 | -8.615850e-47 |
| Msa0351980 | Msa0828570 | 0.853706 | 2.001127e-61 | -8.615850e-47 |
| Msa0351980 | Msa0830720 | 0.809411 | 1.917895e-50 | -8.615850e-47 |
| Msa0351980 | Msa0837510 | -0.839236 | 1.787580e-57 | -8.615850e-47 |
| Msa0351980 | Msa0837990 | 0.816739 | 4.734288e-52 | -8.615850e-47 |
| Msa0351980 | Msa0842050 | 0.802875 | 4.558164e-49 | -8.615850e-47 |
| Msa0351980 | Msa0843280 | 0.822363 | 2.465641e-53 | -8.615850e-47 |
| Msa0351980 | Msa0845590 | -0.825508 | 4.513065e-54 | -8.615850e-47 |
| Msa0351980 | Msa0847200 | 0.837938 | 3.867733e-57 | -8.615850e-47 |
| Msa0351980 | Msa0851740 | 0.805523 | 1.281464e-49 | -8.615850e-47 |
| Msa0351980 | Msa0872660 | 0.802091 | 6.614064e-49 | -8.615850e-47 |
| Msa0351980 | Msa0891040 | 0.800574 | 1.351797e-48 | -8.615850e-47 |
| Msa0351980 | Msa0896210 | 0.800730 | 1.256450e-48 | -8.615850e-47 |
| Msa0351980 | Msa0903730 | 0.813185 | 2.909541e-51 | -8.615850e-47 |
| Msa0351980 | Msa0907700 | 0.809940 | 1.475811e-50 | -8.615850e-47 |
| Msa0351980 | Msa0909710 | 0.825834 | 3.776854e-54 | -8.615850e-47 |
| Msa0351980 | Msa0937940 | 0.817566 | 3.085403e-52 | -8.615850e-47 |
| Msa0351980 | Msa0946120 | 0.834355 | 3.145129e-56 | -8.615850e-47 |
| Msa0351980 | Msa0964680 | 0.806089 | 9.741026e-50 | -8.615850e-47 |
| Msa0351980 | Msa0970050 | 0.828354 | 9.420068e-55 | -8.615850e-47 |
| Msa0351980 | Msa0973230 | 0.804353 | 2.250060e-49 | -8.615850e-47 |
| Msa0351980 | Msa0980440 | 0.830166 | 3.421476e-55 | -8.615850e-47 |
| Msa0351980 | Msa0982000 | 0.800059 | 1.721625e-48 | -8.615850e-47 |
| Msa0351980 | Msa0991670 | 0.800899 | 1.160825e-48 | -8.615850e-47 |
| Msa0351980 | Msa1001450 | 0.813441 | 2.555719e-51 | -8.615850e-47 |
| Msa0351980 | Msa1014350 | 0.806815 | 6.848358e-50 | -8.615850e-47 |
| Msa0351980 | Msa1016670 | 0.823674 | 1.219549e-53 | -8.615850e-47 |
| Msa0351980 | Msa1020930 | -0.804330 | 2.274621e-49 | -8.615850e-47 |
| Msa0351980 | Msa1032350 | 0.830577 | 2.716065e-55 | -8.615850e-47 |
| Msa0351980 | Msa1033440 | -0.804448 | 2.150313e-49 | -8.615850e-47 |
| Msa0351980 | Msa1036350 | 0.800390 | 1.473733e-48 | -8.615850e-47 |
| Msa0351980 | Msa1036390 | 0.832117 | 1.134939e-55 | -8.615850e-47 |
| Msa0351980 | Msa1038050 | 0.813245 | 2.822237e-51 | -8.615850e-47 |
| Msa0351980 | Msa1038320 | 0.801066 | 1.072977e-48 | -8.615850e-47 |
| Msa0351980 | Msa1056640 | 0.802237 | 6.172431e-49 | -8.615850e-47 |
| Msa0351980 | Msa1058010 | 0.805334 | 1.403782e-49 | -8.615850e-47 |
| Msa0351980 | Msa1072350 | 0.816312 | 5.900999e-52 | -8.615850e-47 |
| Msa0351980 | Msa1076630 | 0.818741 | 1.673390e-52 | -8.615850e-47 |
| Msa0351980 | Msa1076680 | 0.834481 | 2.922983e-56 | -8.615850e-47 |
| Msa0351980 | Msa1077670 | 0.812095 | 5.037246e-51 | -8.615850e-47 |
| Msa0351980 | Msa1111630 | 0.805175 | 1.515082e-49 | -8.615850e-47 |
| Msa0351980 | Msa1113200 | 0.815471 | 9.091682e-52 | -8.615850e-47 |
| Msa0351980 | Msa1118140 | 0.815040 | 1.133410e-51 | -8.615850e-47 |
| Msa0351980 | Msa1133660 | 0.823084 | 1.675273e-53 | -8.615850e-47 |
| Msa0351980 | Msa1182830 | 0.806397 | 8.390173e-50 | -8.615850e-47 |
| Msa0351980 | Msa1184050 | 0.811367 | 7.252778e-51 | -8.615850e-47 |
| Msa0351980 | Msa1184730 | 0.846497 | 2.093452e-59 | -8.615850e-47 |
| Msa0351980 | Msa1195750 | 0.801073 | 1.069566e-48 | -8.615850e-47 |
| Msa0351980 | Msa1201990 | 0.802114 | 6.540929e-49 | -8.615850e-47 |
| Msa0351980 | Msa1204980 | -0.859117 | 5.161432e-63 | -8.615850e-47 |
| Msa0351980 | Msa1205010 | -0.858152 | 1.002245e-62 | -8.615850e-47 |
| Msa0351980 | Msa1220230 | 0.817830 | 2.690652e-52 | -8.615850e-47 |
| Msa0351980 | Msa1221200 | -0.812079 | 5.077216e-51 | -8.615850e-47 |
| Msa0351980 | Msa1222970 | 0.806959 | 6.385614e-50 | -8.615850e-47 |
| Msa0351980 | Msa1223460 | 0.815658 | 8.258392e-52 | -8.615850e-47 |
| Msa0351980 | Msa1226600 | 0.801221 | 9.975798e-49 | -8.615850e-47 |
| Msa0351980 | Msa1233770 | 0.801867 | 7.350923e-49 | -8.615850e-47 |
| Msa0351980 | Msa1238700 | 0.825261 | 5.161190e-54 | -8.615850e-47 |
| Msa0351980 | Msa1243130 | 0.805408 | 1.354187e-49 | -8.615850e-47 |
| Msa0351980 | Msa1254950 | 0.856310 | 3.508426e-62 | -8.615850e-47 |
| Msa0351980 | Msa1256540 | -0.856020 | 4.264534e-62 | -8.615850e-47 |
| Msa0351980 | Msa1264560 | 0.802083 | 6.638447e-49 | -8.615850e-47 |
| Msa0351980 | Msa1265960 | 0.832310 | 1.017072e-55 | -8.615850e-47 |
| Msa0351980 | Msa1278420 | 0.807571 | 4.737253e-50 | -8.615850e-47 |
| Msa0351980 | Msa1280130 | 0.807045 | 6.124174e-50 | -8.615850e-47 |
| Msa0351980 | Msa1289130 | 0.809832 | 1.556898e-50 | -8.615850e-47 |
| Msa0351980 | Msa1295690 | 0.855068 | 8.085047e-62 | -8.615850e-47 |
| Msa0351980 | Msa1296960 | -0.859045 | 5.425810e-63 | -8.615850e-47 |
| Msa0351980 | Msa1317710 | 0.813601 | 2.356774e-51 | -8.615850e-47 |
| Msa0351980 | Msa1326000 | 0.832966 | 6.991323e-56 | -8.615850e-47 |
| Msa0351980 | Msa1329990 | 0.828420 | 9.081385e-55 | -8.615850e-47 |
| Msa0351980 | Msa1335970 | -0.842812 | 2.056683e-58 | -8.615850e-47 |
| Msa0351980 | Msa1347290 | 0.825025 | 5.870417e-54 | -8.615850e-47 |
| Msa0351980 | Msa1347620 | 0.800276 | 1.554607e-48 | -8.615850e-47 |
| Msa0351980 | Msa1358870 | -0.818362 | 2.039403e-52 | -8.615850e-47 |
| Msa0351980 | Msa1365040 | -0.818084 | 2.356950e-52 | -8.615850e-47 |
| Msa0351980 | Msa1373950 | 0.809857 | 1.537733e-50 | -8.615850e-47 |
| Msa0351980 | Msa1385620 | 0.809075 | 2.263023e-50 | -8.615850e-47 |
| Msa0351980 | Msa1385900 | 0.815821 | 7.597198e-52 | -8.615850e-47 |
| Msa0351980 | Msa1395570 | 0.819140 | 1.358155e-52 | -8.615850e-47 |
| Msa0351980 | Msa1411070 | 0.807944 | 3.947183e-50 | -8.615850e-47 |
| Msa0351980 | Msa1418200 | 0.808356 | 3.223961e-50 | -8.615850e-47 |
| Msa0351980 | Msa1424000 | 0.800307 | 1.532415e-48 | -8.615850e-47 |
| Msa0351980 | Msa1427760 | 0.811785 | 5.884182e-51 | -8.615850e-47 |
| Msa0351980 | Msa1427830 | 0.819307 | 1.243861e-52 | -8.615850e-47 |
| Msa0351980 | Msa1431000 | 0.828285 | 9.787323e-55 | -8.615850e-47 |
| Msa0351980 | Msa1438270 | 0.803623 | 3.191926e-49 | -8.615850e-47 |
| Msa0351980 | Msa1447440 | 0.807470 | 4.975501e-50 | -8.615850e-47 |
| Msa0351980 | Msa1454110 | 0.808797 | 2.596203e-50 | -8.615850e-47 |
| Msa0351980 | Msa1456810 | 0.860153 | 2.519446e-63 | -8.615850e-47 |
| Msa0351980 | Msa1457670 | -0.815875 | 7.389675e-52 | -8.615850e-47 |
| Msa0351980 | Msa1458550 | 0.814272 | 1.676731e-51 | -8.615850e-47 |
| Msa0351980 | Msa1460310 | -0.814886 | 1.226061e-51 | -8.615850e-47 |
| Msa0351980 | Msa1464560 | 0.841509 | 4.551007e-58 | -8.615850e-47 |
| Msa0351980 | Msa1465900 | 0.806848 | 6.739183e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0351980 | MtrunA17_Chr3g0086851 | 94.179 | 670 | 33 | 2 | 1 | 669 | 1 | 665 | 0.0 | 1267 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0351980 | AT5G61040.1 | 31.433 | 719 | 308 | 22 | 1 | 666 | 1 | 587 | 3.17e-73 | 248 |
| Msa0351980 | AT5G08010.1 | 29.799 | 698 | 319 | 19 | 1 | 664 | 1 | 561 | 3.22e-54 | 195 |
Find 155 sgRNAs with CRISPR-Local
Find 322 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCATTTAAAGATCCAATTT+TGG | 0.143154 | 3_1:-19616548 | None:intergenic |
| TGCATCAAGTTTCATCTTCT+TGG | 0.170236 | 3_1:-19616572 | None:intergenic |
| TTGAAGGGGTTTGATTTAAT+TGG | 0.179347 | 3_1:+19615375 | Msa0351980:five_prime_UTR |
| GTTCCTTCCTTGCCCAAAAT+TGG | 0.190143 | 3_1:+19616535 | Msa0351980:CDS |
| ACCTGATAGATTGAGAATTA+AGG | 0.192741 | 3_1:-19619454 | None:intergenic |
| AAAGACATATTCTTCCATTT+TGG | 0.197205 | 3_1:-19616350 | None:intergenic |
| CAACTTTCTAAGGAATTTAA+TGG | 0.229860 | 3_1:-19616298 | None:intergenic |
| CTGTTATATAGCGGCTTTAT+AGG | 0.253100 | 3_1:+19615551 | Msa0351980:five_prime_UTR |
| TTCAGTCTTGGGATTTCTCT+TGG | 0.270448 | 3_1:+19617858 | Msa0351980:CDS |
| CAAAGAATCATATGATAAAA+AGG | 0.284476 | 3_1:+19618124 | Msa0351980:CDS |
| CACCATATGATGATAACTTT+AGG | 0.286181 | 3_1:+19616122 | Msa0351980:CDS |
| TTCCTTAGAAAGTTGTTTCA+TGG | 0.286371 | 3_1:+19616306 | Msa0351980:CDS |
| GAGCAAAATACGAGTAGTTT+TGG | 0.297577 | 3_1:+19616163 | Msa0351980:CDS |
| CGGCGTTTCTCTTCAGTCTT+GGG | 0.311500 | 3_1:+19617847 | Msa0351980:CDS |
| GTAACTTGTAGTGTAGAGTT+TGG | 0.311786 | 3_1:+19615517 | Msa0351980:five_prime_UTR |
| CCTGATAGATTGAGAATTAA+GGG | 0.314416 | 3_1:-19619453 | None:intergenic |
| ACCATATGATGATAACTTTA+GGG | 0.323166 | 3_1:+19616123 | Msa0351980:CDS |
| AAGTTCTTCTCTTGGTTGTT+TGG | 0.328480 | 3_1:+19615471 | Msa0351980:five_prime_UTR |
| GAGTTACAAAATGAAAATTA+TGG | 0.330169 | 3_1:+19618008 | Msa0351980:CDS |
| CTGGTTATTTAGCTAAATAT+TGG | 0.333394 | 3_1:+19615792 | Msa0351980:CDS |
| TTATCATCATATGGTGATAA+TGG | 0.336970 | 3_1:-19616115 | None:intergenic |
| CCGGCGTTTCTCTTCAGTCT+TGG | 0.340040 | 3_1:+19617846 | Msa0351980:CDS |
| AGCCATGAAACAACTTTCTA+AGG | 0.343642 | 3_1:-19616308 | None:intergenic |
| AAGAAGAGGAGAACCTTTCT+TGG | 0.349044 | 3_1:-19619745 | None:intergenic |
| TTGTGGGAGAAGATTCCTTT+TGG | 0.352372 | 3_1:-19619383 | None:intergenic |
| CGAAATAACCTTGTTGTAGA+TGG | 0.359330 | 3_1:-19616388 | None:intergenic |
| TACAAAGTGTTGTCAATTAC+CGG | 0.361425 | 3_1:+19615629 | Msa0351980:five_prime_UTR |
| CCAAAGACCTTACTTTCATC+TGG | 0.367245 | 3_1:-19619338 | None:intergenic |
| ATTCCTATCCACAACTCTTT+CGG | 0.369194 | 3_1:+19616226 | Msa0351980:CDS |
| CCAGATGAAAGTAAGGTCTT+TGG | 0.369710 | 3_1:+19619338 | Msa0351980:CDS |
| CCCTTAATTCTCAATCTATC+AGG | 0.371613 | 3_1:+19619453 | Msa0351980:CDS |
| AAGGTCCGCTTTCGCATGAT+TGG | 0.372235 | 3_1:+19619580 | Msa0351980:CDS |
| AAAACGTTTCGTTGAGAGAA+AGG | 0.374754 | 3_1:-19616257 | None:intergenic |
| TCCTTGGATGGTCCTTCAAC+AGG | 0.378617 | 3_1:+19615995 | Msa0351980:CDS |
| ATGTAGCTCCTTACCATTGA+AGG | 0.383984 | 3_1:-19618054 | None:intergenic |
| ATATAAAGAGCATGCCAAAA+TGG | 0.389469 | 3_1:+19616336 | Msa0351980:CDS |
| GAAGCTGAACTTGAGAGGTT+AGG | 0.389764 | 3_1:+19618191 | Msa0351980:CDS |
| AGTGGAAAACTCACTCAATA+TGG | 0.390330 | 3_1:+19616640 | Msa0351980:CDS |
| TTCATGGAAAGTTCTTCTCT+TGG | 0.392527 | 3_1:+19615463 | Msa0351980:five_prime_UTR |
| ATCAATAAGTTTCCTCTTGT+GGG | 0.394744 | 3_1:-19619399 | None:intergenic |
| TCAGTCTTGGGATTTCTCTT+GGG | 0.395373 | 3_1:+19617859 | Msa0351980:CDS |
| TGATTCTTTGCATTCTACTC+TGG | 0.395507 | 3_1:-19618111 | None:intergenic |
| GGGTTGTTTGAGGGAGGTTA+AGG | 0.397445 | 3_1:-19615900 | None:intergenic |
| TAATTGGCAAAATATATGTT+TGG | 0.399450 | 3_1:+19615391 | Msa0351980:five_prime_UTR |
| AAGCTGAACTTGAGAGGTTA+GGG | 0.400444 | 3_1:+19618192 | Msa0351980:CDS |
| GGTGAAACTGCATAGTTTGC+AGG | 0.405373 | 3_1:-19619228 | None:intergenic |
| ACGTCTCCGGGGTTGTTTGA+GGG | 0.414797 | 3_1:-19615909 | None:intergenic |
| GTTGTGGATAGGAATCAATT+TGG | 0.417343 | 3_1:-19616218 | None:intergenic |
| CACGTCTCCGGGGTTGTTTG+AGG | 0.424022 | 3_1:-19615910 | None:intergenic |
| ATTTCGTTTCACGGATACTA+AGG | 0.428464 | 3_1:+19614739 | Msa0351980:five_prime_UTR |
| CTTGTAGTGTAGAGTTTGGT+TGG | 0.434627 | 3_1:+19615521 | Msa0351980:five_prime_UTR |
| TTCCTCGTAGGTTTCATTGT+AGG | 0.440539 | 3_1:-19619490 | None:intergenic |
| ATCAATTTGGCAGGAAACTC+AGG | 0.441226 | 3_1:-19616205 | None:intergenic |
| CCACCATTGACAACAGTTAG+TGG | 0.442259 | 3_1:+19615715 | Msa0351980:five_prime_UTR |
| CAGTGCATTGACTGGAAGTA+AGG | 0.443744 | 3_1:+19616459 | Msa0351980:CDS |
| TCCCTAAAGTTATCATCATA+TGG | 0.445438 | 3_1:-19616124 | None:intergenic |
| TCTAGTGAATTGAATGTTAG+TGG | 0.446663 | 3_1:+19619654 | Msa0351980:CDS |
| ATGAAACTTGATGCAGTTGA+TGG | 0.447217 | 3_1:+19616580 | Msa0351980:CDS |
| CTCTGAAGACAAATGATAAG+AGG | 0.447999 | 3_1:-19615840 | None:intergenic |
| GGAGACGTGGCTTCTTATAG+AGG | 0.450752 | 3_1:+19616016 | Msa0351980:CDS |
| CTGTAACACTGTATTATTAG+TGG | 0.452979 | 3_1:+19615663 | Msa0351980:five_prime_UTR |
| GATTCTTTGCATTCTACTCT+GGG | 0.455473 | 3_1:-19618110 | None:intergenic |
| GTTCTCAGATGCGAATTCCT+TGG | 0.456535 | 3_1:+19615979 | Msa0351980:CDS |
| GTATCCGTGAAACGAAATCT+AGG | 0.457226 | 3_1:-19614734 | None:intergenic |
| CTTTCACTCGTGTTTCGAGT+TGG | 0.461666 | 3_1:-19619290 | None:intergenic |
| GAAGCCACGTCTCCTGTTGA+AGG | 0.464754 | 3_1:-19616007 | None:intergenic |
| CAACCCCGGAGACGTGAAAA+GGG | 0.464778 | 3_1:+19615917 | Msa0351980:CDS |
| ATTGTTGAAAGAACCAAGAA+AGG | 0.468316 | 3_1:+19619732 | Msa0351980:CDS |
| AAAATAGCCAGATGAAAGTA+AGG | 0.469262 | 3_1:+19619331 | Msa0351980:CDS |
| GCTCGGATAATTTCCTATCC+AGG | 0.472177 | 3_1:-19618235 | None:intergenic |
| CATCAATAAGTTTCCTCTTG+TGG | 0.473507 | 3_1:-19619400 | None:intergenic |
| TGTTGATAATTGAAAGAAAG+AGG | 0.484934 | 3_1:+19615494 | Msa0351980:five_prime_UTR |
| TGGATAGGAATCAATTTGGC+AGG | 0.489229 | 3_1:-19616214 | None:intergenic |
| ACGTGTGATCATTCCTTCAA+TGG | 0.489917 | 3_1:+19618041 | Msa0351980:CDS |
| CTCTTATCATTTGTCTTCAG+AGG | 0.490889 | 3_1:+19615841 | Msa0351980:CDS |
| ACAACCCCGGAGACGTGAAA+AGG | 0.492826 | 3_1:+19615916 | Msa0351980:CDS |
| GTATCCTAGATTTCGTTTCA+CGG | 0.493854 | 3_1:+19614730 | Msa0351980:five_prime_UTR |
| AACTTTAGGGATGGTGCAGA+TGG | 0.495448 | 3_1:+19616136 | Msa0351980:CDS |
| TAATGGTCTACTAACATGCT+CGG | 0.495493 | 3_1:-19616281 | None:intergenic |
| GGACATGAATGCGTCAAGCC+TGG | 0.500491 | 3_1:+19618217 | Msa0351980:CDS |
| AAAATTCTTGCAGATTGATC+CGG | 0.500918 | 3_1:+19619125 | Msa0351980:intron |
| GGCTGATGGTGAATTGTCTT+CGG | 0.512782 | 3_1:-19619532 | None:intergenic |
| GTTGAAGCAGAATGAGAACT+TGG | 0.515778 | 3_1:+19617935 | Msa0351980:CDS |
| AATGGTCTACTAACATGCTC+GGG | 0.515836 | 3_1:-19616280 | None:intergenic |
| AGGTGGAGAGGCTATTGATA+AGG | 0.520272 | 3_1:+19619706 | Msa0351980:CDS |
| ATAGATTGAGAATTAAGGGC+TGG | 0.521418 | 3_1:-19619449 | None:intergenic |
| AAATTTACATCATGCTTGCA+AGG | 0.525257 | 3_1:+19619899 | Msa0351980:three_prime_UTR |
| ACTGCATAGTTTGCAGGAAG+AGG | 0.525668 | 3_1:-19619222 | None:intergenic |
| ATACGATTTCGCGACAATGT+TGG | 0.527511 | 3_1:+19619620 | Msa0351980:CDS |
| GATTATAAGCTGCATAAAGC+TGG | 0.528729 | 3_1:+19616481 | Msa0351980:CDS |
| TGGTTAGAGTGGTGAATTGA+AGG | 0.530209 | 3_1:+19615359 | Msa0351980:five_prime_UTR |
| GTGATAGTGAGGAGGTGGAG+AGG | 0.532539 | 3_1:+19619694 | Msa0351980:CDS |
| ACATGATGGTAGTTTCCAAA+AGG | 0.535115 | 3_1:+19619368 | Msa0351980:CDS |
| TCCTGTTGAAGGACCATCCA+AGG | 0.538591 | 3_1:-19615996 | None:intergenic |
| TTTCGAGCTGACACGGCTAG+TGG | 0.539697 | 3_1:+19619177 | Msa0351980:CDS |
| TGAATGTGATAGTGAGGAGG+TGG | 0.540055 | 3_1:+19619689 | Msa0351980:CDS |
| CACGAAGTATTGTCGAATCT+CGG | 0.540599 | 3_1:-19614708 | None:intergenic |
| GGCAAAATATATGTTTGGCA+TGG | 0.544553 | 3_1:+19615396 | Msa0351980:five_prime_UTR |
| TGATCATTCCTTCAATGGTA+AGG | 0.545919 | 3_1:+19618046 | Msa0351980:CDS |
| GGAGGTTAAGGAGCTGCTAA+AGG | 0.548362 | 3_1:-19615888 | None:intergenic |
| AGTTTGATCAGTGCATTGAC+TGG | 0.553765 | 3_1:+19616451 | Msa0351980:CDS |
| TAAGGAGCTGCTAAAGGACT+CGG | 0.554501 | 3_1:-19615882 | None:intergenic |
| TAGATTGAGAATTAAGGGCT+GGG | 0.555194 | 3_1:-19619448 | None:intergenic |
| CTTTGTACTAACACATATCA+CGG | 0.555980 | 3_1:-19615613 | None:intergenic |
| TGTTACAGCGCTGCTATAGC+CGG | 0.556175 | 3_1:-19615648 | None:intergenic |
| CATATTTATTAATTCCTCGT+AGG | 0.561440 | 3_1:-19619502 | None:intergenic |
| TGTCCGAAAGAGTTGTGGAT+AGG | 0.561918 | 3_1:-19616229 | None:intergenic |
| GTTGATAATTGAAAGAAAGA+GGG | 0.564530 | 3_1:+19615495 | Msa0351980:five_prime_UTR |
| GCAAAATCTGCTACAAACTC+CGG | 0.565111 | 3_1:-19619144 | None:intergenic |
| TCAGATGCGAATTCCTTGGA+TGG | 0.569288 | 3_1:+19615983 | Msa0351980:CDS |
| CAGACAAACATTGAAGATAA+CGG | 0.571610 | 3_1:+19614670 | Msa0351980:five_prime_UTR |
| GTCGTCACTATCATGAATGA+TGG | 0.571660 | 3_1:-19619553 | None:intergenic |
| TGAATGCGTCAAGCCTGGAT+AGG | 0.575622 | 3_1:+19618222 | Msa0351980:CDS |
| TGAACTTGAGAGGTTAGGGT+TGG | 0.576928 | 3_1:+19618196 | Msa0351980:CDS |
| CATCCACTAACTGTTGTCAA+TGG | 0.577540 | 3_1:-19615718 | None:intergenic |
| GTTAGAGTGGTGAATTGAAG+GGG | 0.580565 | 3_1:+19615361 | Msa0351980:five_prime_UTR |
| AGGTTATTTCGTGTTAGCAA+TGG | 0.581371 | 3_1:+19616400 | Msa0351980:CDS |
| CATGATAGTGACGACAAAGA+AGG | 0.582628 | 3_1:+19619561 | Msa0351980:CDS |
| CCACTAACTGTTGTCAATGG+TGG | 0.585819 | 3_1:-19615715 | None:intergenic |
| AGGTGAGTTTCGAGCTGACA+CGG | 0.586885 | 3_1:+19619170 | Msa0351980:CDS |
| TATGCTTACCTCAACAAGCT+CGG | 0.589234 | 3_1:-19618252 | None:intergenic |
| GAAATTATCCGAGCTTGTTG+AGG | 0.590101 | 3_1:+19618244 | Msa0351980:CDS |
| AGCTTGAAGCTGAACTTGAG+AGG | 0.594301 | 3_1:+19618186 | Msa0351980:CDS |
| GCATTCCAATCATGCGAAAG+CGG | 0.594884 | 3_1:-19619585 | None:intergenic |
| TCTCCGGGGTTGTTTGAGGG+AGG | 0.601668 | 3_1:-19615906 | None:intergenic |
| TATGATGATAACTTTAGGGA+TGG | 0.603242 | 3_1:+19616127 | Msa0351980:CDS |
| GATTTCGCGACAATGTTGGA+AGG | 0.608266 | 3_1:+19619624 | Msa0351980:CDS |
| AAGGAATCTTCTCCCACAAG+AGG | 0.611867 | 3_1:+19619387 | Msa0351980:CDS |
| ATCAAAATCTACTCTTCCAG+TGG | 0.616966 | 3_1:-19615337 | None:intergenic |
| GTTGTAGATGGTGATGAAAG+AGG | 0.619822 | 3_1:-19616376 | None:intergenic |
| GGTTAGAGTGGTGAATTGAA+GGG | 0.621908 | 3_1:+19615360 | Msa0351980:five_prime_UTR |
| AGGAAGAGGTGTGGTGACAT+TGG | 0.623249 | 3_1:-19619208 | None:intergenic |
| TGGTCCTTCAACAGGAGACG+TGG | 0.623404 | 3_1:+19616003 | Msa0351980:CDS |
| GTTATTGTGAGAACGACTGA+AGG | 0.623492 | 3_1:+19615428 | Msa0351980:five_prime_UTR |
| ATTTCGCGACAATGTTGGAA+GGG | 0.624496 | 3_1:+19619625 | Msa0351980:CDS |
| GAAAGATTCGATGACAGTGA+AGG | 0.627956 | 3_1:+19617986 | Msa0351980:CDS |
| GAGACGTGGCTTCTTATAGA+GGG | 0.628104 | 3_1:+19616017 | Msa0351980:CDS |
| CCAAGACTGAAGAGAAACGC+CGG | 0.633812 | 3_1:-19617846 | None:intergenic |
| TTATTGTGAGAACGACTGAA+GGG | 0.634190 | 3_1:+19615429 | Msa0351980:five_prime_UTR |
| TAACCTCCCTCAAACAACCC+CGG | 0.642935 | 3_1:+19615903 | Msa0351980:CDS |
| GGTGCAGTGCTGTTATATAG+CGG | 0.643098 | 3_1:+19615542 | Msa0351980:five_prime_UTR |
| AAGTTGTGAATGTGATAGTG+AGG | 0.643341 | 3_1:+19619683 | Msa0351980:CDS |
| CTATCATGAATGATGGCTGA+TGG | 0.644869 | 3_1:-19619546 | None:intergenic |
| CTGTTGTCAATGGTGGATCG+AGG | 0.654501 | 3_1:-19615708 | None:intergenic |
| GTTAGTGGATGTGAGAGTCA+CGG | 0.667507 | 3_1:+19615730 | Msa0351980:five_prime_UTR |
| TTTCATCACCATCTACAACA+AGG | 0.679672 | 3_1:+19616380 | Msa0351980:CDS |
| TGGGATAATAACTTCCAACA+TGG | 0.689562 | 3_1:+19617878 | Msa0351980:CDS |
| AAACGTAAACTCAGTTCATG+CGG | 0.690091 | 3_1:-19619249 | None:intergenic |
| CAGTTGATGGACGAAGTCGA+AGG | 0.702830 | 3_1:+19616593 | Msa0351980:CDS |
| TCTTTGGAAACTGAACATGA+TGG | 0.702890 | 3_1:+19619354 | Msa0351980:CDS |
| TTGTGAATGTGATAGTGAGG+AGG | 0.723093 | 3_1:+19619686 | Msa0351980:CDS |
| GAAGTATTGTCGAATCTCGG+AGG | 0.730198 | 3_1:-19614705 | None:intergenic |
| ATAGTTTGCAGGAAGAGGTG+TGG | 0.753936 | 3_1:-19619217 | None:intergenic |
| TTATAGGAGCAATAGCATAG+CGG | 0.766088 | 3_1:+19615567 | Msa0351980:five_prime_UTR |
| AGCCTACAATGAAACCTACG+AGG | 0.771327 | 3_1:+19619488 | Msa0351980:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATATCTTAAAAATATTGA+AGG | - | chr3_1:19617449-19617468 | None:intergenic | 10.0% |
| !!! | TAGTTTTAATATATGAAAAA+TGG | + | chr3_1:19618512-19618531 | Msa0351980:intron | 10.0% |
| !!! | AGTTTTAATATATGAAAAAT+GGG | + | chr3_1:19618513-19618532 | Msa0351980:intron | 10.0% |
| !!! | TTATAATTTTGATTAACTCA+AGG | - | chr3_1:19617527-19617546 | None:intergenic | 15.0% |
| !! | TACAAAAATAAGTATATGTA+TGG | - | chr3_1:19618854-19618873 | None:intergenic | 15.0% |
| !! | AAAAAAGATATTGTATTCTA+TGG | + | chr3_1:19619776-19619795 | Msa0351980:CDS | 15.0% |
| !! | TTATTGTAAGAAGAAAATGT+TGG | + | chr3_1:19614887-19614906 | Msa0351980:intron | 20.0% |
| !! | TATTGTAAGAAGAAAATGTT+GGG | + | chr3_1:19614888-19614907 | Msa0351980:intron | 20.0% |
| !!! | TCATTAGTTTTGATTGTTTT+TGG | + | chr3_1:19614911-19614930 | Msa0351980:intron | 20.0% |
| !!! | CATTAGTTTTGATTGTTTTT+GGG | + | chr3_1:19614912-19614931 | Msa0351980:intron | 20.0% |
| !! | AAAAAACTAAAACTACTCAA+AGG | - | chr3_1:19615002-19615021 | None:intergenic | 20.0% |
| !!! | TTTGAGTAGTTTTAGTTTTT+TGG | + | chr3_1:19615001-19615020 | Msa0351980:intron | 20.0% |
| !!! | TTGAGTAGTTTTAGTTTTTT+GGG | + | chr3_1:19615002-19615021 | Msa0351980:intron | 20.0% |
| !! | GAATAACCTAACTATAAATA+AGG | - | chr3_1:19615245-19615264 | None:intergenic | 20.0% |
| !!! | TTATTTTTTTCAGGTTTTGT+TGG | + | chr3_1:19615302-19615321 | Msa0351980:intron | 20.0% |
| !! | TAATTGGCAAAATATATGTT+TGG | + | chr3_1:19615391-19615410 | Msa0351980:five_prime_UTR | 20.0% |
| !! | TAAATATTGGAAAAAGAGTT+TGG | + | chr3_1:19615805-19615824 | Msa0351980:CDS | 20.0% |
| !!! | AAGATGTTTTTTTAGATAGA+AGG | + | chr3_1:19615942-19615961 | Msa0351980:CDS | 20.0% |
| !!! | AGATGTTTTTTTAGATAGAA+GGG | + | chr3_1:19615943-19615962 | Msa0351980:CDS | 20.0% |
| !!! | AATTTTCTCTATTCAGTATT+CGG | - | chr3_1:19616429-19616448 | None:intergenic | 20.0% |
| !!! | TCATTTAAAGATCCAATTTT+GGG | - | chr3_1:19616550-19616569 | None:intergenic | 20.0% |
| !!! | ATCATTTAAAGATCCAATTT+TGG | - | chr3_1:19616551-19616570 | None:intergenic | 20.0% |
| !!! | AAAAGAAAGAGTTCTAAAAA+AGG | - | chr3_1:19616846-19616865 | None:intergenic | 20.0% |
| !! | GAAAAATTGTAATGAAATCT+TGG | + | chr3_1:19617296-19617315 | Msa0351980:intron | 20.0% |
| !! | GAGTTACAAAATGAAAATTA+TGG | + | chr3_1:19618008-19618027 | Msa0351980:CDS | 20.0% |
| !! | CAAAGAATCATATGATAAAA+AGG | + | chr3_1:19618124-19618143 | Msa0351980:CDS | 20.0% |
| !! | TTCAAAGAATGGAATTAAAA+TGG | + | chr3_1:19618393-19618412 | Msa0351980:intron | 20.0% |
| !!! | ATTGATATCATCTAGTTTTT+AGG | + | chr3_1:19619817-19619836 | Msa0351980:exon | 20.0% |
| !!! | TGATGTAAATTTTGAAACAA+GGG | - | chr3_1:19619891-19619910 | None:intergenic | 20.0% |
| !!! | ATGATGTAAATTTTGAAACA+AGG | - | chr3_1:19619892-19619911 | None:intergenic | 20.0% |
| ! | TTCTGACATTGAAGAAAAAA+AGG | - | chr3_1:19614834-19614853 | None:intergenic | 25.0% |
| !!! | TTTTGATTGTTTTTGGGAAA+TGG | + | chr3_1:19614918-19614937 | Msa0351980:intron | 25.0% |
| !!! | TTTGATTGTTTTTGGGAAAT+GGG | + | chr3_1:19614919-19614938 | Msa0351980:intron | 25.0% |
| !!! | TGAGTAGTTTTAGTTTTTTG+GGG | + | chr3_1:19615003-19615022 | Msa0351980:intron | 25.0% |
| !!! | TTGATTTCATCTTCTGAAAT+TGG | + | chr3_1:19615098-19615117 | Msa0351980:intron | 25.0% |
| ! | AAAACATAAATTCTTGCCAT+CGG | - | chr3_1:19615210-19615229 | None:intergenic | 25.0% |
| !! | CTTGTTCCTTATTTATAGTT+AGG | + | chr3_1:19615236-19615255 | Msa0351980:intron | 25.0% |
| !!! | TGTTGATAATTGAAAGAAAG+AGG | + | chr3_1:19615494-19615513 | Msa0351980:five_prime_UTR | 25.0% |
| !!! | GTTGATAATTGAAAGAAAGA+GGG | + | chr3_1:19615495-19615514 | Msa0351980:five_prime_UTR | 25.0% |
| ! | CTGGTTATTTAGCTAAATAT+TGG | + | chr3_1:19615792-19615811 | Msa0351980:CDS | 25.0% |
| !!! | GATGTTTTTTTAGATAGAAG+GGG | + | chr3_1:19615944-19615963 | Msa0351980:CDS | 25.0% |
| ! | TTATCATCATATGGTGATAA+TGG | - | chr3_1:19616118-19616137 | None:intergenic | 25.0% |
| ! | ACCATATGATGATAACTTTA+GGG | + | chr3_1:19616123-19616142 | Msa0351980:CDS | 25.0% |
| !! | CAACTTTCTAAGGAATTTAA+TGG | - | chr3_1:19616301-19616320 | None:intergenic | 25.0% |
| !! | AAAGACATATTCTTCCATTT+TGG | - | chr3_1:19616353-19616372 | None:intergenic | 25.0% |
| ! | GAAAAACACAAAAATGTAGT+TGG | + | chr3_1:19616508-19616527 | Msa0351980:CDS | 25.0% |
| ! | AAACATTTCAAACACAACAT+AGG | - | chr3_1:19616698-19616717 | None:intergenic | 25.0% |
| !!! | TTGCAATATAACGGATTTTT+AGG | - | chr3_1:19616791-19616810 | None:intergenic | 25.0% |
| !!! | CTAAAAAAGGTTTTGAATTG+CGG | - | chr3_1:19616833-19616852 | None:intergenic | 25.0% |
| ! | TATTTAAGCTGTTTAGTTAC+TGG | - | chr3_1:19617023-19617042 | None:intergenic | 25.0% |
| ! | ATAATTTCCTCAAGAATAAC+AGG | - | chr3_1:19617209-19617228 | None:intergenic | 25.0% |
| ! | ATAGAATGAAAAGAAGTCTA+TGG | - | chr3_1:19617245-19617264 | None:intergenic | 25.0% |
| !!! | TGTTTTTTCGTTAGTTAGTT+TGG | + | chr3_1:19617592-19617611 | Msa0351980:intron | 25.0% |
| ! | CTAATGGAAATTTCAAAGAA+TGG | + | chr3_1:19618382-19618401 | Msa0351980:intron | 25.0% |
| ! | CAATATGATCTCTATATACA+AGG | - | chr3_1:19618437-19618456 | None:intergenic | 25.0% |
| ! | ATATCATTCAATGCATGTTT+GGG | + | chr3_1:19618577-19618596 | Msa0351980:intron | 25.0% |
| ! | TTTGTACTTCTAGTAGATAT+TGG | + | chr3_1:19618868-19618887 | Msa0351980:intron | 25.0% |
| ! | TAGAACTTGAAAGCAAAATA+AGG | - | chr3_1:19618965-19618984 | None:intergenic | 25.0% |
| ! | ATATGAGATTTACTTTACAC+TGG | - | chr3_1:19619029-19619048 | None:intergenic | 25.0% |
| ! | AATATTGTTAGTGTGACAAT+GGG | + | chr3_1:19619090-19619109 | Msa0351980:intron | 25.0% |
| ! | CATATTTATTAATTCCTCGT+AGG | - | chr3_1:19619505-19619524 | None:intergenic | 25.0% |
| !!! | TTTTTTGCATTTTGAAGAAG+AGG | - | chr3_1:19619762-19619781 | None:intergenic | 25.0% |
| CAGACAAACATTGAAGATAA+CGG | + | chr3_1:19614670-19614689 | Msa0351980:five_prime_UTR | 30.0% | |
| !! | AAATGGGTTTTTCTCAGAAA+AGG | + | chr3_1:19614935-19614954 | Msa0351980:intron | 30.0% |
| !! | AATGGGTTTTTCTCAGAAAA+GGG | + | chr3_1:19614936-19614955 | Msa0351980:intron | 30.0% |
| !! | AGTTGATTGTTTGTTGTTCT+TGG | + | chr3_1:19615055-19615074 | Msa0351980:intron | 30.0% |
| ! | TTGAAGGGGTTTGATTTAAT+TGG | + | chr3_1:19615375-19615394 | Msa0351980:five_prime_UTR | 30.0% |
| !!! | AAGGGTTTTTTACTGATTCA+TGG | + | chr3_1:19615447-19615466 | Msa0351980:five_prime_UTR | 30.0% |
| CTTTGTACTAACACATATCA+CGG | - | chr3_1:19615616-19615635 | None:intergenic | 30.0% | |
| !! | TACAAAGTGTTGTCAATTAC+CGG | + | chr3_1:19615629-19615648 | Msa0351980:five_prime_UTR | 30.0% |
| CTGTAACACTGTATTATTAG+TGG | + | chr3_1:19615663-19615682 | Msa0351980:five_prime_UTR | 30.0% | |
| TGGAAAAAGAGTTTGGAAAA+TGG | + | chr3_1:19615812-19615831 | Msa0351980:CDS | 30.0% | |
| !!! | TTTTTTAGATAGAAGGGGTT+CGG | + | chr3_1:19615949-19615968 | Msa0351980:CDS | 30.0% |
| CACCATATGATGATAACTTT+AGG | + | chr3_1:19616122-19616141 | Msa0351980:CDS | 30.0% | |
| TCCCTAAAGTTATCATCATA+TGG | - | chr3_1:19616127-19616146 | None:intergenic | 30.0% | |
| ! | TATGATGATAACTTTAGGGA+TGG | + | chr3_1:19616127-19616146 | Msa0351980:CDS | 30.0% |
| ! | TTCCTTAGAAAGTTGTTTCA+TGG | + | chr3_1:19616306-19616325 | Msa0351980:CDS | 30.0% |
| ! | ATATAAAGAGCATGCCAAAA+TGG | + | chr3_1:19616336-19616355 | Msa0351980:CDS | 30.0% |
| AAACACAAAAATGTAGTTGG+AGG | + | chr3_1:19616511-19616530 | Msa0351980:CDS | 30.0% | |
| AACACAAAAATGTAGTTGGA+GGG | + | chr3_1:19616512-19616531 | Msa0351980:CDS | 30.0% | |
| !!! | TTTTCTGATGACTTGTTTAG+TGG | + | chr3_1:19616622-19616641 | Msa0351980:CDS | 30.0% |
| ! | CTCATTTTCCAGCAATATAA+AGG | - | chr3_1:19616738-19616757 | None:intergenic | 30.0% |
| CTTTATATTGCTGGAAAATG+AGG | + | chr3_1:19616736-19616755 | Msa0351980:intron | 30.0% | |
| CTAAACAGCTTAAATATAGC+TGG | + | chr3_1:19617027-19617046 | Msa0351980:intron | 30.0% | |
| !!! | TTTTGCGTTTTAACTGGTTT+AGG | + | chr3_1:19617422-19617441 | Msa0351980:intron | 30.0% |
| TACTAACGAAAGATACATTC+AGG | + | chr3_1:19617657-19617676 | Msa0351980:intron | 30.0% | |
| CATTGAGTAAATAGTCACTT+TGG | - | chr3_1:19617738-19617757 | None:intergenic | 30.0% | |
| !! | TTCTCTTTTATTTGCCATGT+TGG | - | chr3_1:19617895-19617914 | None:intergenic | 30.0% |
| ! | AGCTATCAATATGCTTTTCA+GGG | - | chr3_1:19618088-19618107 | None:intergenic | 30.0% |
| ! | TGTTAAGGTGAAAACTTTTG+AGG | - | chr3_1:19618467-19618486 | None:intergenic | 30.0% |
| GATATCATTCAATGCATGTT+TGG | + | chr3_1:19618576-19618595 | Msa0351980:intron | 30.0% | |
| TTTAGACAAAAGCTACACTT+TGG | - | chr3_1:19618661-19618680 | None:intergenic | 30.0% | |
| TTGTTTAGTACCAATGTGTT+TGG | - | chr3_1:19618739-19618758 | None:intergenic | 30.0% | |
| TCTAGTAGATATTGGAATTG+TGG | + | chr3_1:19618876-19618895 | Msa0351980:intron | 30.0% | |
| GCTATCAAAACAAACATACA+TGG | - | chr3_1:19618988-19619007 | None:intergenic | 30.0% | |
| CTGGAAAAAGAAACTTTGTA+TGG | - | chr3_1:19619010-19619029 | None:intergenic | 30.0% | |
| CAATATTGTTAGTGTGACAA+TGG | + | chr3_1:19619089-19619108 | Msa0351980:intron | 30.0% | |
| AAAATTCTTGCAGATTGATC+CGG | + | chr3_1:19619125-19619144 | Msa0351980:intron | 30.0% | |
| !! | TTTCATCTGGCTATTTTCAA+GGG | - | chr3_1:19619328-19619347 | None:intergenic | 30.0% |
| AAAATAGCCAGATGAAAGTA+AGG | + | chr3_1:19619331-19619350 | Msa0351980:CDS | 30.0% | |
| ATCAATAAGTTTCCTCTTGT+GGG | - | chr3_1:19619402-19619421 | None:intergenic | 30.0% | |
| CCTGATAGATTGAGAATTAA+GGG | - | chr3_1:19619456-19619475 | None:intergenic | 30.0% | |
| ACCTGATAGATTGAGAATTA+AGG | - | chr3_1:19619457-19619476 | None:intergenic | 30.0% | |
| TCTAGTGAATTGAATGTTAG+TGG | + | chr3_1:19619654-19619673 | Msa0351980:CDS | 30.0% | |
| ATTGTTGAAAGAACCAAGAA+AGG | + | chr3_1:19619732-19619751 | Msa0351980:CDS | 30.0% | |
| !!! | CATCTAGTTTTTAGGAATGT+AGG | + | chr3_1:19619825-19619844 | Msa0351980:three_prime_UTR | 30.0% |
| AAATTTACATCATGCTTGCA+AGG | + | chr3_1:19619899-19619918 | Msa0351980:three_prime_UTR | 30.0% | |
| GTATCCTAGATTTCGTTTCA+CGG | + | chr3_1:19614730-19614749 | Msa0351980:five_prime_UTR | 35.0% | |
| ATTTCGTTTCACGGATACTA+AGG | + | chr3_1:19614739-19614758 | Msa0351980:five_prime_UTR | 35.0% | |
| ACCACAAATTATTCCAACTG+AGG | + | chr3_1:19615167-19615186 | Msa0351980:intron | 35.0% | |
| TCCTCAGTTGGAATAATTTG+TGG | - | chr3_1:19615171-19615190 | None:intergenic | 35.0% | |
| ATCAAAATCTACTCTTCCAG+TGG | - | chr3_1:19615340-19615359 | None:intergenic | 35.0% | |
| ! | ACTGGAAGAGTAGATTTTGA+TGG | + | chr3_1:19615339-19615358 | Msa0351980:five_prime_UTR | 35.0% |
| !! | GTAGATTTTGATGGTTAGAG+TGG | + | chr3_1:19615348-19615367 | Msa0351980:five_prime_UTR | 35.0% |
| GGCAAAATATATGTTTGGCA+TGG | + | chr3_1:19615396-19615415 | Msa0351980:five_prime_UTR | 35.0% | |
| TTATTGTGAGAACGACTGAA+GGG | + | chr3_1:19615429-19615448 | Msa0351980:five_prime_UTR | 35.0% | |
| TTCATGGAAAGTTCTTCTCT+TGG | + | chr3_1:19615463-19615482 | Msa0351980:five_prime_UTR | 35.0% | |
| AAGTTCTTCTCTTGGTTGTT+TGG | + | chr3_1:19615471-19615490 | Msa0351980:five_prime_UTR | 35.0% | |
| ! | GTAACTTGTAGTGTAGAGTT+TGG | + | chr3_1:19615517-19615536 | Msa0351980:five_prime_UTR | 35.0% |
| ! | CTGTTATATAGCGGCTTTAT+AGG | + | chr3_1:19615551-19615570 | Msa0351980:five_prime_UTR | 35.0% |
| TTATAGGAGCAATAGCATAG+CGG | + | chr3_1:19615567-19615586 | Msa0351980:five_prime_UTR | 35.0% | |
| ! | TCACGGTAAAAATGGATTTG+TGG | + | chr3_1:19615747-19615766 | Msa0351980:exon | 35.0% |
| ! | CTCTGAAGACAAATGATAAG+AGG | - | chr3_1:19615843-19615862 | None:intergenic | 35.0% |
| CTCTTATCATTTGTCTTCAG+AGG | + | chr3_1:19615841-19615860 | Msa0351980:CDS | 35.0% | |
| ! | GAGCAAAATACGAGTAGTTT+TGG | + | chr3_1:19616163-19616182 | Msa0351980:CDS | 35.0% |
| GTTGTGGATAGGAATCAATT+TGG | - | chr3_1:19616221-19616240 | None:intergenic | 35.0% | |
| ATTCCTATCCACAACTCTTT+CGG | + | chr3_1:19616226-19616245 | Msa0351980:CDS | 35.0% | |
| AAAACGTTTCGTTGAGAGAA+AGG | - | chr3_1:19616260-19616279 | None:intergenic | 35.0% | |
| TAATGGTCTACTAACATGCT+CGG | - | chr3_1:19616284-19616303 | None:intergenic | 35.0% | |
| AGCCATGAAACAACTTTCTA+AGG | - | chr3_1:19616311-19616330 | None:intergenic | 35.0% | |
| TTTCATCACCATCTACAACA+AGG | + | chr3_1:19616380-19616399 | Msa0351980:CDS | 35.0% | |
| ! | CGAAATAACCTTGTTGTAGA+TGG | - | chr3_1:19616391-19616410 | None:intergenic | 35.0% |
| ! | AGGTTATTTCGTGTTAGCAA+TGG | + | chr3_1:19616400-19616419 | Msa0351980:CDS | 35.0% |
| GATTATAAGCTGCATAAAGC+TGG | + | chr3_1:19616481-19616500 | Msa0351980:CDS | 35.0% | |
| ACACAAAAATGTAGTTGGAG+GGG | + | chr3_1:19616513-19616532 | Msa0351980:CDS | 35.0% | |
| ! | TAAAGATCCAATTTTGGGCA+AGG | - | chr3_1:19616545-19616564 | None:intergenic | 35.0% |
| TGCATCAAGTTTCATCTTCT+TGG | - | chr3_1:19616575-19616594 | None:intergenic | 35.0% | |
| ATGAAACTTGATGCAGTTGA+TGG | + | chr3_1:19616580-19616599 | Msa0351980:CDS | 35.0% | |
| AGTGGAAAACTCACTCAATA+TGG | + | chr3_1:19616640-19616659 | Msa0351980:CDS | 35.0% | |
| CTTGCAAACCTTTATATTGC+TGG | + | chr3_1:19616727-19616746 | Msa0351980:intron | 35.0% | |
| CAATCGCAGTTGCAATATAA+CGG | - | chr3_1:19616800-19616819 | None:intergenic | 35.0% | |
| AAACACACCTGTTATTCTTG+AGG | + | chr3_1:19617199-19617218 | Msa0351980:intron | 35.0% | |
| TGAAAAGAAGTCTATGGCAT+TGG | - | chr3_1:19617239-19617258 | None:intergenic | 35.0% | |
| !! | AAAGCGTTTTGCGTTTTAAC+TGG | + | chr3_1:19617416-19617435 | Msa0351980:intron | 35.0% |
| ACTAACGAAAAAACACATCG+AGG | - | chr3_1:19617587-19617606 | None:intergenic | 35.0% | |
| !! | TCGTTAGTTAGTTTGGTTCT+TGG | + | chr3_1:19617599-19617618 | Msa0351980:intron | 35.0% |
| TGATACTGCCTCAAACATTT+AGG | + | chr3_1:19617710-19617729 | Msa0351980:intron | 35.0% | |
| GATACTGCCTCAAACATTTA+GGG | + | chr3_1:19617711-19617730 | Msa0351980:intron | 35.0% | |
| TGGGATAATAACTTCCAACA+TGG | + | chr3_1:19617878-19617897 | Msa0351980:CDS | 35.0% | |
| TGATCATTCCTTCAATGGTA+AGG | + | chr3_1:19618046-19618065 | Msa0351980:CDS | 35.0% | |
| ! | GCTATCAATATGCTTTTCAG+GGG | - | chr3_1:19618087-19618106 | None:intergenic | 35.0% |
| ! | GAGCTATCAATATGCTTTTC+AGG | - | chr3_1:19618089-19618108 | None:intergenic | 35.0% |
| GATTCTTTGCATTCTACTCT+GGG | - | chr3_1:19618113-19618132 | None:intergenic | 35.0% | |
| TGATTCTTTGCATTCTACTC+TGG | - | chr3_1:19618114-19618133 | None:intergenic | 35.0% | |
| ! | AGCATAACTGTCACATTTTC+CGG | + | chr3_1:19618269-19618288 | Msa0351980:intron | 35.0% |
| ! | GTATGGATTGACAATGTGTT+TGG | - | chr3_1:19618837-19618856 | None:intergenic | 35.0% |
| CAAAATAAGGCATGCAACAT+TGG | - | chr3_1:19618952-19618971 | None:intergenic | 35.0% | |
| ! | TTTTGCTCCATAGCTATGTT+TGG | + | chr3_1:19619048-19619067 | Msa0351980:intron | 35.0% |
| ACTTGAACCAAACATAGCTA+TGG | - | chr3_1:19619058-19619077 | None:intergenic | 35.0% | |
| AAACGTAAACTCAGTTCATG+CGG | - | chr3_1:19619252-19619271 | None:intergenic | 35.0% | |
| !! | CTTTCATCTGGCTATTTTCA+AGG | - | chr3_1:19619329-19619348 | None:intergenic | 35.0% |
| ! | TCTTTGGAAACTGAACATGA+TGG | + | chr3_1:19619354-19619373 | Msa0351980:CDS | 35.0% |
| ACATGATGGTAGTTTCCAAA+AGG | + | chr3_1:19619368-19619387 | Msa0351980:CDS | 35.0% | |
| CATCAATAAGTTTCCTCTTG+TGG | - | chr3_1:19619403-19619422 | None:intergenic | 35.0% | |
| TAGATTGAGAATTAAGGGCT+GGG | - | chr3_1:19619451-19619470 | None:intergenic | 35.0% | |
| ATAGATTGAGAATTAAGGGC+TGG | - | chr3_1:19619452-19619471 | None:intergenic | 35.0% | |
| CCCTTAATTCTCAATCTATC+AGG | + | chr3_1:19619453-19619472 | Msa0351980:CDS | 35.0% | |
| ! | AAGTTGTGAATGTGATAGTG+AGG | + | chr3_1:19619683-19619702 | Msa0351980:CDS | 35.0% |
| ! | TCTGCAACAACGTGTTTTCA+CGG | - | chr3_1:19614654-19614673 | None:intergenic | 40.0% |
| !! | CACGAAGTATTGTCGAATCT+CGG | - | chr3_1:19614711-19614730 | None:intergenic | 40.0% |
| GTATCCGTGAAACGAAATCT+AGG | - | chr3_1:19614737-19614756 | None:intergenic | 40.0% | |
| !! | CAGAAAAGGGTTTTGTAGTG+AGG | + | chr3_1:19614949-19614968 | Msa0351980:intron | 40.0% |
| GTTCTTGGAATGTTTGTGTC+TGG | + | chr3_1:19615070-19615089 | Msa0351980:intron | 40.0% | |
| TCTGTAATCCAGAGTTCGAT+CGG | + | chr3_1:19615127-19615146 | Msa0351980:intron | 40.0% | |
| !! | TTGGTTCTTTTTGCTACCAC+TGG | + | chr3_1:19615321-19615340 | Msa0351980:five_prime_UTR | 40.0% |
| TGGTTAGAGTGGTGAATTGA+AGG | + | chr3_1:19615359-19615378 | Msa0351980:five_prime_UTR | 40.0% | |
| GGTTAGAGTGGTGAATTGAA+GGG | + | chr3_1:19615360-19615379 | Msa0351980:five_prime_UTR | 40.0% | |
| GTTAGAGTGGTGAATTGAAG+GGG | + | chr3_1:19615361-19615380 | Msa0351980:five_prime_UTR | 40.0% | |
| GTTATTGTGAGAACGACTGA+AGG | + | chr3_1:19615428-19615447 | Msa0351980:five_prime_UTR | 40.0% | |
| CTTGTAGTGTAGAGTTTGGT+TGG | + | chr3_1:19615521-19615540 | Msa0351980:five_prime_UTR | 40.0% | |
| CATCCACTAACTGTTGTCAA+TGG | - | chr3_1:19615721-19615740 | None:intergenic | 40.0% | |
| TGTGAGAGTCACGGTAAAAA+TGG | + | chr3_1:19615739-19615758 | Msa0351980:exon | 40.0% | |
| !!! | ACGAGTAGTTTTGGCAATCA+TGG | + | chr3_1:19616172-19616191 | Msa0351980:CDS | 40.0% |
| !!! | CGAGTAGTTTTGGCAATCAT+GGG | + | chr3_1:19616173-19616192 | Msa0351980:CDS | 40.0% |
| ATCAATTTGGCAGGAAACTC+AGG | - | chr3_1:19616208-19616227 | None:intergenic | 40.0% | |
| TGGATAGGAATCAATTTGGC+AGG | - | chr3_1:19616217-19616236 | None:intergenic | 40.0% | |
| ! | TTTTGTGTCCGAAAGAGTTG+TGG | - | chr3_1:19616237-19616256 | None:intergenic | 40.0% |
| AATGGTCTACTAACATGCTC+GGG | - | chr3_1:19616283-19616302 | None:intergenic | 40.0% | |
| ! | GTTGTAGATGGTGATGAAAG+AGG | - | chr3_1:19616379-19616398 | None:intergenic | 40.0% |
| ! | AGTTTGATCAGTGCATTGAC+TGG | + | chr3_1:19616451-19616470 | Msa0351980:CDS | 40.0% |
| TGTGTTGAGAGTAACACTGT+TGG | + | chr3_1:19616865-19616884 | Msa0351980:intron | 40.0% | |
| ATGCGACTTCTGTTACAATC+AGG | + | chr3_1:19616922-19616941 | Msa0351980:intron | 40.0% | |
| !!! | TCTTGGTTACTTTTGCTCAC+AGG | + | chr3_1:19617313-19617332 | Msa0351980:intron | 40.0% |
| ! | TGTGCTCTTGATAGTCAGTT+TGG | + | chr3_1:19617560-19617579 | Msa0351980:intron | 40.0% |
| CTTTGGTCCCTAAATGTTTG+AGG | - | chr3_1:19617721-19617740 | None:intergenic | 40.0% | |
| ACGTCCGTAATTATCAGATC+CGG | + | chr3_1:19617827-19617846 | Msa0351980:intron | 40.0% | |
| AACGCCGGATCTGATAATTA+CGG | - | chr3_1:19617834-19617853 | None:intergenic | 40.0% | |
| TTCAGTCTTGGGATTTCTCT+TGG | + | chr3_1:19617858-19617877 | Msa0351980:CDS | 40.0% | |
| TCAGTCTTGGGATTTCTCTT+GGG | + | chr3_1:19617859-19617878 | Msa0351980:CDS | 40.0% | |
| GTTGAAGCAGAATGAGAACT+TGG | + | chr3_1:19617935-19617954 | Msa0351980:CDS | 40.0% | |
| GAAAGATTCGATGACAGTGA+AGG | + | chr3_1:19617986-19618005 | Msa0351980:CDS | 40.0% | |
| ACGTGTGATCATTCCTTCAA+TGG | + | chr3_1:19618041-19618060 | Msa0351980:CDS | 40.0% | |
| ATGTAGCTCCTTACCATTGA+AGG | - | chr3_1:19618057-19618076 | None:intergenic | 40.0% | |
| AAGCTGAACTTGAGAGGTTA+GGG | + | chr3_1:19618192-19618211 | Msa0351980:CDS | 40.0% | |
| !! | GAAATTATCCGAGCTTGTTG+AGG | + | chr3_1:19618244-19618263 | Msa0351980:CDS | 40.0% |
| TATGCTTACCTCAACAAGCT+CGG | - | chr3_1:19618255-19618274 | None:intergenic | 40.0% | |
| CCGAAGACTTGTATAGTTAC+CGG | - | chr3_1:19618291-19618310 | None:intergenic | 40.0% | |
| CCGGTAACTATACAAGTCTT+CGG | + | chr3_1:19618288-19618307 | Msa0351980:intron | 40.0% | |
| GTATGCACTGTCTTGACTAA+TGG | + | chr3_1:19618366-19618385 | Msa0351980:intron | 40.0% | |
| GAAATCAGGAAGAATGGATG+TGG | - | chr3_1:19618545-19618564 | None:intergenic | 40.0% | |
| GCAACTGAAATCAGGAAGAA+TGG | - | chr3_1:19618551-19618570 | None:intergenic | 40.0% | |
| ATCATGCTGCAACTGAAATC+AGG | - | chr3_1:19618559-19618578 | None:intergenic | 40.0% | |
| CATTCAATGCATGTTTGGGT+TGG | + | chr3_1:19618581-19618600 | Msa0351980:intron | 40.0% | |
| !! | CATGTTTGGGTTGGTGAATT+TGG | + | chr3_1:19618590-19618609 | Msa0351980:intron | 40.0% |
| TTGGAGCTTCAACAAAAGCA+AGG | - | chr3_1:19618642-19618661 | None:intergenic | 40.0% | |
| CAATGTGTTTGGCAGAATCT+CGG | - | chr3_1:19618728-19618747 | None:intergenic | 40.0% | |
| TCTTCCTGCAAACTATGCAA+AGG | - | chr3_1:19618773-19618792 | None:intergenic | 40.0% | |
| ! | TTTGCATAGTTTGCAGGAAG+AGG | + | chr3_1:19618772-19618791 | Msa0351980:intron | 40.0% |
| CAATGTGTTTGGCAGAATCA+CGG | - | chr3_1:19618826-19618845 | None:intergenic | 40.0% | |
| AGTGTGACAATGGGTGTTAA+TGG | + | chr3_1:19619099-19619118 | Msa0351980:intron | 40.0% | |
| GCAAAATCTGCTACAAACTC+CGG | - | chr3_1:19619147-19619166 | None:intergenic | 40.0% | |
| ! | TTTGTAGCAGATTTTGCGCA+AGG | + | chr3_1:19619150-19619169 | Msa0351980:CDS | 40.0% |
| CCAAAGACCTTACTTTCATC+TGG | - | chr3_1:19619341-19619360 | None:intergenic | 40.0% | |
| CCAGATGAAAGTAAGGTCTT+TGG | + | chr3_1:19619338-19619357 | Msa0351980:CDS | 40.0% | |
| ! | TTGTGGGAGAAGATTCCTTT+TGG | - | chr3_1:19619386-19619405 | None:intergenic | 40.0% |
| TTCCTCGTAGGTTTCATTGT+AGG | - | chr3_1:19619493-19619512 | None:intergenic | 40.0% | |
| CTATCATGAATGATGGCTGA+TGG | - | chr3_1:19619549-19619568 | None:intergenic | 40.0% | |
| GTCGTCACTATCATGAATGA+TGG | - | chr3_1:19619556-19619575 | None:intergenic | 40.0% | |
| ! | CATGATAGTGACGACAAAGA+AGG | + | chr3_1:19619561-19619580 | Msa0351980:CDS | 40.0% |
| ATACGATTTCGCGACAATGT+TGG | + | chr3_1:19619620-19619639 | Msa0351980:CDS | 40.0% | |
| ATTTCGCGACAATGTTGGAA+GGG | + | chr3_1:19619625-19619644 | Msa0351980:CDS | 40.0% | |
| ! | TTGTGAATGTGATAGTGAGG+AGG | + | chr3_1:19619686-19619705 | Msa0351980:CDS | 40.0% |
| AAGAAGAGGAGAACCTTTCT+TGG | - | chr3_1:19619748-19619767 | None:intergenic | 40.0% | |
| !! | GAAGTATTGTCGAATCTCGG+AGG | - | chr3_1:19614708-19614727 | None:intergenic | 45.0% |
| TAATCCAGAGTTCGATCGGA+AGG | + | chr3_1:19615131-19615150 | Msa0351980:intron | 45.0% | |
| TTCCAACTGAGGATCGAACT+CGG | + | chr3_1:19615178-19615197 | Msa0351980:intron | 45.0% | |
| ! | GGTGCAGTGCTGTTATATAG+CGG | + | chr3_1:19615542-19615561 | Msa0351980:five_prime_UTR | 45.0% |
| CCACTAACTGTTGTCAATGG+TGG | - | chr3_1:19615718-19615737 | None:intergenic | 45.0% | |
| CCACCATTGACAACAGTTAG+TGG | + | chr3_1:19615715-19615734 | Msa0351980:five_prime_UTR | 45.0% | |
| ! | GTTAGTGGATGTGAGAGTCA+CGG | + | chr3_1:19615730-19615749 | Msa0351980:five_prime_UTR | 45.0% |
| TAAGGAGCTGCTAAAGGACT+CGG | - | chr3_1:19615885-19615904 | None:intergenic | 45.0% | |
| ! | TTTTCCCTTTTCACGTCTCC+GGG | - | chr3_1:19615924-19615943 | None:intergenic | 45.0% |
| ! | CTTTTCCCTTTTCACGTCTC+CGG | - | chr3_1:19615925-19615944 | None:intergenic | 45.0% |
| GTTCTCAGATGCGAATTCCT+TGG | + | chr3_1:19615979-19615998 | Msa0351980:CDS | 45.0% | |
| TCAGATGCGAATTCCTTGGA+TGG | + | chr3_1:19615983-19616002 | Msa0351980:CDS | 45.0% | |
| GAGACGTGGCTTCTTATAGA+GGG | + | chr3_1:19616017-19616036 | Msa0351980:CDS | 45.0% | |
| ! | AACTTTAGGGATGGTGCAGA+TGG | + | chr3_1:19616136-19616155 | Msa0351980:CDS | 45.0% |
| TGTCCGAAAGAGTTGTGGAT+AGG | - | chr3_1:19616232-19616251 | None:intergenic | 45.0% | |
| !! | CAGTGCATTGACTGGAAGTA+AGG | + | chr3_1:19616459-19616478 | Msa0351980:CDS | 45.0% |
| GTTCCTTCCTTGCCCAAAAT+TGG | + | chr3_1:19616535-19616554 | Msa0351980:CDS | 45.0% | |
| ! | GATCCAATTTTGGGCAAGGA+AGG | - | chr3_1:19616541-19616560 | None:intergenic | 45.0% |
| !!! | GGATTTTTAGGTCTCCGCAA+CGG | - | chr3_1:19616779-19616798 | None:intergenic | 45.0% |
| CACACTGCTACTAGAAATGC+AGG | - | chr3_1:19616955-19616974 | None:intergenic | 45.0% | |
| !! | CTGCATTTCTAGTAGCAGTG+TGG | + | chr3_1:19616953-19616972 | Msa0351980:intron | 45.0% |
| GGTGCAAAGCTAATTCTGAC+TGG | + | chr3_1:19616991-19617010 | Msa0351980:intron | 45.0% | |
| AGCTTGAAGCTGAACTTGAG+AGG | + | chr3_1:19618186-19618205 | Msa0351980:CDS | 45.0% | |
| GAAGCTGAACTTGAGAGGTT+AGG | + | chr3_1:19618191-19618210 | Msa0351980:CDS | 45.0% | |
| TGAACTTGAGAGGTTAGGGT+TGG | + | chr3_1:19618196-19618215 | Msa0351980:CDS | 45.0% | |
| GCTCGGATAATTTCCTATCC+AGG | - | chr3_1:19618238-19618257 | None:intergenic | 45.0% | |
| TGCAGTTGCACTCTCTGTTA+AGG | - | chr3_1:19618482-19618501 | None:intergenic | 45.0% | |
| ! | AACAGAGAGTGCAACTGCAA+AGG | + | chr3_1:19618483-19618502 | Msa0351980:intron | 45.0% |
| AAAAGCAAGGTGGCACAATG+TGG | - | chr3_1:19618629-19618648 | None:intergenic | 45.0% | |
| GAGCTTCAACAAAAGCAAGG+TGG | - | chr3_1:19618639-19618658 | None:intergenic | 45.0% | |
| CGAGATTCTGCCAAACACAT+TGG | + | chr3_1:19618726-19618745 | Msa0351980:intron | 45.0% | |
| TCCTGCAAACTATGCAAAGG+TGG | - | chr3_1:19618770-19618789 | None:intergenic | 45.0% | |
| ! | ATAGTTTGCAGGAAGAGGTG+TGG | + | chr3_1:19618777-19618796 | Msa0351980:intron | 45.0% |
| ! | ATAGTTTGCAGGAAGAGGTG+TGG | - | chr3_1:19618777-19618796 | None:intergenic | 45.0% |
| ! | ACTGCATAGTTTGCAGGAAG+AGG | - | chr3_1:19619225-19619244 | None:intergenic | 45.0% |
| ! | GGTGAAACTGCATAGTTTGC+AGG | - | chr3_1:19619231-19619250 | None:intergenic | 45.0% |
| ! | CTTTCACTCGTGTTTCGAGT+TGG | - | chr3_1:19619293-19619312 | None:intergenic | 45.0% |
| AAGGAATCTTCTCCCACAAG+AGG | + | chr3_1:19619387-19619406 | Msa0351980:CDS | 45.0% | |
| AGCCTACAATGAAACCTACG+AGG | + | chr3_1:19619488-19619507 | Msa0351980:CDS | 45.0% | |
| ! | GGCTGATGGTGAATTGTCTT+CGG | - | chr3_1:19619535-19619554 | None:intergenic | 45.0% |
| GCATTCCAATCATGCGAAAG+CGG | - | chr3_1:19619588-19619607 | None:intergenic | 45.0% | |
| GATTTCGCGACAATGTTGGA+AGG | + | chr3_1:19619624-19619643 | Msa0351980:CDS | 45.0% | |
| ! | TGAATGTGATAGTGAGGAGG+TGG | + | chr3_1:19619689-19619708 | Msa0351980:CDS | 45.0% |
| AGGTGGAGAGGCTATTGATA+AGG | + | chr3_1:19619706-19619725 | Msa0351980:CDS | 45.0% | |
| !!! | TATTTTATTTTATTTTTTTC+AGG | + | chr3_1:19615293-19615312 | Msa0351980:intron | 5.0% |
| CTTACCTTCCGATCGAACTC+TGG | - | chr3_1:19615138-19615157 | None:intergenic | 50.0% | |
| TCCAACTGAGGATCGAACTC+GGG | + | chr3_1:19615179-19615198 | Msa0351980:intron | 50.0% | |
| TGTTACAGCGCTGCTATAGC+CGG | - | chr3_1:19615651-19615670 | None:intergenic | 50.0% | |
| !! | CTGTTGTCAATGGTGGATCG+AGG | - | chr3_1:19615711-19615730 | None:intergenic | 50.0% |
| !!! | TGGCTTGCAGCTGCTTTTAC+TGG | + | chr3_1:19615767-19615786 | Msa0351980:CDS | 50.0% |
| GGAGGTTAAGGAGCTGCTAA+AGG | - | chr3_1:19615891-19615910 | None:intergenic | 50.0% | |
| GGGTTGTTTGAGGGAGGTTA+AGG | - | chr3_1:19615903-19615922 | None:intergenic | 50.0% | |
| TAACCTCCCTCAAACAACCC+CGG | + | chr3_1:19615903-19615922 | Msa0351980:CDS | 50.0% | |
| ! | TTTCCCTTTTCACGTCTCCG+GGG | - | chr3_1:19615923-19615942 | None:intergenic | 50.0% |
| TCCTTGGATGGTCCTTCAAC+AGG | + | chr3_1:19615995-19616014 | Msa0351980:CDS | 50.0% | |
| TCCTGTTGAAGGACCATCCA+AGG | - | chr3_1:19615999-19616018 | None:intergenic | 50.0% | |
| GGAGACGTGGCTTCTTATAG+AGG | + | chr3_1:19616016-19616035 | Msa0351980:CDS | 50.0% | |
| !! | CAGTTGATGGACGAAGTCGA+AGG | + | chr3_1:19616593-19616612 | Msa0351980:CDS | 50.0% |
| GCTGGAAAATGAGGCTGATG+CGG | + | chr3_1:19616745-19616764 | Msa0351980:intron | 50.0% | |
| ! | TTTTGAATTGCGGCCCGCAA+CGG | - | chr3_1:19616823-19616842 | None:intergenic | 50.0% |
| AGCTTTGCACCTGCTATTGC+AGG | - | chr3_1:19616982-19617001 | None:intergenic | 50.0% | |
| ! | GACTATCAAGAGCACATGCG+AGG | - | chr3_1:19617556-19617575 | None:intergenic | 50.0% |
| CCAAGACTGAAGAGAAACGC+CGG | - | chr3_1:19617849-19617868 | None:intergenic | 50.0% | |
| CGGCGTTTCTCTTCAGTCTT+GGG | + | chr3_1:19617847-19617866 | Msa0351980:CDS | 50.0% | |
| TGAATGCGTCAAGCCTGGAT+AGG | + | chr3_1:19618222-19618241 | Msa0351980:CDS | 50.0% | |
| ! | GCCACCTTTGCATAGTTTGC+AGG | + | chr3_1:19618766-19618785 | Msa0351980:intron | 50.0% |
| AGGTGAGTTTCGAGCTGACA+CGG | + | chr3_1:19619170-19619189 | Msa0351980:CDS | 50.0% | |
| ! | AGGAAGAGGTGTGGTGACAT+TGG | - | chr3_1:19619211-19619230 | None:intergenic | 50.0% |
| AAGGTCCGCTTTCGCATGAT+TGG | + | chr3_1:19619580-19619599 | Msa0351980:CDS | 50.0% | |
| ACCCGAGTTCGATCCTCAGT+TGG | - | chr3_1:19615183-19615202 | None:intergenic | 55.0% | |
| TCGAACTCGGGTTCTTCCGA+TGG | + | chr3_1:19615191-19615210 | Msa0351980:intron | 55.0% | |
| !!! | GCAGCTGCTTTTACTGGAGC+TGG | + | chr3_1:19615773-19615792 | Msa0351980:CDS | 55.0% |
| ACGTCTCCGGGGTTGTTTGA+GGG | - | chr3_1:19615912-19615931 | None:intergenic | 55.0% | |
| ACAACCCCGGAGACGTGAAA+AGG | + | chr3_1:19615916-19615935 | Msa0351980:CDS | 55.0% | |
| CAACCCCGGAGACGTGAAAA+GGG | + | chr3_1:19615917-19615936 | Msa0351980:CDS | 55.0% | |
| TGGTCCTTCAACAGGAGACG+TGG | + | chr3_1:19616003-19616022 | Msa0351980:CDS | 55.0% | |
| GAAGCCACGTCTCCTGTTGA+AGG | - | chr3_1:19616010-19616029 | None:intergenic | 55.0% | |
| TGCAACTGCGATTGCCGTTG+CGG | + | chr3_1:19616806-19616825 | Msa0351980:intron | 55.0% | |
| GTGTGGTGACCTGCAATAGC+AGG | + | chr3_1:19616970-19616989 | Msa0351980:intron | 55.0% | |
| CCGGCGTTTCTCTTCAGTCT+TGG | + | chr3_1:19617846-19617865 | Msa0351980:CDS | 55.0% | |
| GGACATGAATGCGTCAAGCC+TGG | + | chr3_1:19618217-19618236 | Msa0351980:CDS | 55.0% | |
| ! | AGGAAGAGGTGTGGTACTCG+CGG | + | chr3_1:19618786-19618805 | Msa0351980:intron | 55.0% |
| TTTCGAGCTGACACGGCTAG+TGG | + | chr3_1:19619177-19619196 | Msa0351980:CDS | 55.0% | |
| ! | GTGATAGTGAGGAGGTGGAG+AGG | + | chr3_1:19619694-19619713 | Msa0351980:CDS | 55.0% |
| TCTCCGGGGTTGTTTGAGGG+AGG | - | chr3_1:19615909-19615928 | None:intergenic | 60.0% | |
| CACGTCTCCGGGGTTGTTTG+AGG | - | chr3_1:19615913-19615932 | None:intergenic | 60.0% | |
| ATGCGGTTGCGATGCCGTTG+CGG | + | chr3_1:19616762-19616781 | Msa0351980:intron | 60.0% | |
| GCAACTGCGATTGCCGTTGC+GGG | + | chr3_1:19616807-19616826 | Msa0351980:intron | 60.0% | |
| ! | GGAAGAGGTGTGGTACTCGC+GGG | + | chr3_1:19618787-19618806 | Msa0351980:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 19614575 | 19619981 | 19614575 | ID=Msa0351980;Name=Msa0351980 |
| chr3_1 | mRNA | 19614575 | 19619981 | 19614575 | ID=Msa0351980-mRNA-1;Parent=Msa0351980;Name=Msa0351980-mRNA-1;_AED=0.04;_eAED=0.04;_QI=642|1|1|1|0.33|0.5|4|160|669 |
| chr3_1 | exon | 19614575 | 19614773 | 19614575 | ID=Msa0351980-mRNA-1:exon:4579;Parent=Msa0351980-mRNA-1 |
| chr3_1 | exon | 19615315 | 19616661 | 19615315 | ID=Msa0351980-mRNA-1:exon:4580;Parent=Msa0351980-mRNA-1 |
| chr3_1 | exon | 19617844 | 19618265 | 19617844 | ID=Msa0351980-mRNA-1:exon:4581;Parent=Msa0351980-mRNA-1 |
| chr3_1 | exon | 19619138 | 19619981 | 19619138 | ID=Msa0351980-mRNA-1:exon:4582;Parent=Msa0351980-mRNA-1 |
| chr3_1 | five_prime_UTR | 19614575 | 19614773 | 19614575 | ID=Msa0351980-mRNA-1:five_prime_utr;Parent=Msa0351980-mRNA-1 |
| chr3_1 | five_prime_UTR | 19615315 | 19615757 | 19615315 | ID=Msa0351980-mRNA-1:five_prime_utr;Parent=Msa0351980-mRNA-1 |
| chr3_1 | CDS | 19615758 | 19616661 | 19615758 | ID=Msa0351980-mRNA-1:cds;Parent=Msa0351980-mRNA-1 |
| chr3_1 | CDS | 19617844 | 19618265 | 19617844 | ID=Msa0351980-mRNA-1:cds;Parent=Msa0351980-mRNA-1 |
| chr3_1 | CDS | 19619138 | 19619821 | 19619138 | ID=Msa0351980-mRNA-1:cds;Parent=Msa0351980-mRNA-1 |
| chr3_1 | three_prime_UTR | 19619822 | 19619981 | 19619822 | ID=Msa0351980-mRNA-1:three_prime_utr;Parent=Msa0351980-mRNA-1 |
| Gene Sequence |
| Protein sequence |
