AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0994280

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0994280 MtrunA17_Chr6g0479271 85.410 329 39 3 28 355 8 328 0.0 528
Msa0994280 MtrunA17_Chr8g0387181 57.303 356 81 8 29 323 177 522 7.13e-111 336
Msa0994280 MtrunA17_Chr8g0387181 72.973 37 10 0 319 355 592 628 9.19e-12 66.2
Msa0994280 MtrunA17_Chr8g0387141 58.055 329 78 10 29 321 184 488 2.02e-104 318
Msa0994280 MtrunA17_Chr8g0387141 75.676 37 9 0 319 355 560 596 1.37e-11 65.9
Msa0994280 MtrunA17_Chr5g0420461 79.899 199 22 1 157 355 17 197 3.17e-100 294
Msa0994280 MtrunA17_Chr1g0186281 56.013 316 105 8 30 328 186 484 1.51e-96 298
Msa0994280 MtrunA17_Chr1g0186191 54.545 330 100 9 30 328 184 494 4.72e-95 294
Msa0994280 MtrunA17_Chr1g0186261 54.574 317 110 8 30 328 187 487 2.67e-93 290
Msa0994280 MtrunA17_Chr8g0387161 56.303 238 36 6 103 321 1 189 7.58e-73 228
Msa0994280 MtrunA17_Chr8g0387161 75.676 37 9 0 319 355 261 297 3.95e-11 63.2
Msa0994280 MtrunA17_Chr7g0248041 31.419 296 176 9 41 322 201 483 3.90e-28 115
Msa0994280 MtrunA17_Chr8g0348691 38.286 175 90 6 164 322 1 173 6.73e-27 107
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0994280 AT2G46040.3 31.224 237 128 5 94 319 244 456 8.39e-26 108
Msa0994280 AT2G46040.1 31.224 237 128 5 94 319 244 456 8.39e-26 108
Msa0994280 AT2G46040.2 31.224 237 128 5 94 319 258 470 8.98e-26 108
Msa0994280 AT4G11400.2 28.819 288 157 10 71 321 195 471 2.96e-24 104
Msa0994280 AT4G11400.1 28.819 288 157 10 71 321 195 471 2.96e-24 104
Msa0994280 AT5G04110.4 33.083 133 77 4 212 332 344 476 2.19e-11 65.5
Msa0994280 AT5G04110.1 33.083 133 77 4 212 332 344 476 2.51e-11 65.5
Msa0994280 AT5G04110.3 33.083 133 77 4 212 332 344 476 2.51e-11 65.5
Msa0994280 AT5G04110.2 33.083 133 77 4 212 332 345 477 2.60e-11 65.1

Find 200 sgRNAs with CRISPR-Local

Find 428 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATCATCACCGTTAAAATTT+TGG 0.115734 6_4:-68771473 None:intergenic
CACCCTCACATTTGTTGTTT+TGG 0.143855 6_4:-68771449 None:intergenic
TCCTTATATGTCTCCTTCTA+TGG 0.146412 6_4:+68768117 Msa0994280:five_prime_UTR
TTCATTCTCGCAAACGTAAA+AGG 0.167837 6_4:+68771580 Msa0994280:CDS
ATGGGGTAAAATGGGAATTT+TGG 0.174593 6_4:+68770353 Msa0994280:five_prime_UTR
TTCTGCTTGTGCTTCTATTT+TGG 0.197746 6_4:+68767108 Msa0994280:five_prime_UTR
CAAACTTAGGGAAATGTATT+TGG 0.236081 6_4:-68770675 None:intergenic
CATTTCCCTAAGTTTGATTA+AGG 0.241443 6_4:+68770682 Msa0994280:five_prime_UTR
TGCATTTCACTTTCTGTTGC+AGG 0.241637 6_4:+68772775 Msa0994280:CDS
TGACATGAAAATCTTATATA+TGG 0.248384 6_4:-68770631 None:intergenic
TTTATCGGACTGGACTAAAA+TGG 0.250700 6_4:+68770778 Msa0994280:five_prime_UTR
GTATAAAACATGGGGTAAAA+TGG 0.255054 6_4:+68770344 Msa0994280:five_prime_UTR
GTACCATCAACATATATAAA+AGG 0.256363 6_4:+68771201 Msa0994280:five_prime_UTR
TTCCATACAGCTTCTTGATA+TGG 0.274256 6_4:-68768067 None:intergenic
GAAGTTAAGTTTGGATCATT+TGG 0.280644 6_4:+68773156 Msa0994280:CDS
CCTAAGTTTGATTAAGGAAA+TGG 0.286278 6_4:+68770688 Msa0994280:five_prime_UTR
CCTTTGGGGATTTGACAAAA+TGG 0.297533 6_4:+68773128 Msa0994280:CDS
GAAGAAACTGAAGCTTGAAT+TGG 0.300868 6_4:+68773092 Msa0994280:CDS
CTAATCGATTTGGGCTTTAT+CGG 0.300905 6_4:+68770763 Msa0994280:five_prime_UTR
AAGTTAAGTTTGGATCATTT+GGG 0.304834 6_4:+68773157 Msa0994280:CDS
ACAAGTTCTGTTTCTGTAGT+AGG 0.308191 6_4:-68772988 None:intergenic
TTGACTTGACCTAATCGATT+TGG 0.314487 6_4:+68770753 Msa0994280:five_prime_UTR
GCATTGCTACTATTTATTCT+TGG 0.315728 6_4:+68770011 Msa0994280:five_prime_UTR
TACTAGTCATGTTCGTTTCC+AGG 0.316810 6_4:-68768243 None:intergenic
TTTGATTAAGGAAATGGATT+TGG 0.323594 6_4:+68770694 Msa0994280:five_prime_UTR
TATATATCTTCAGAAGGATT+TGG 0.326608 6_4:-68770315 None:intergenic
TGGTTCTGCAGTTATCTAAA+AGG 0.332136 6_4:+68769976 Msa0994280:intron
TGACTTGACCTAATCGATTT+GGG 0.335524 6_4:+68770754 Msa0994280:five_prime_UTR
GTTAGAAACTTACTATGTTT+AGG 0.347014 6_4:-68767377 None:intergenic
CAGTAAAAGTTTCAGTTTCA+AGG 0.348216 6_4:-68771338 None:intergenic
CCATTTCCTTAATCAAACTT+AGG 0.349665 6_4:-68770688 None:intergenic
CCTTATATGTCTCCTTCTAT+GGG 0.352549 6_4:+68768118 Msa0994280:five_prime_UTR
ACCCTAGTATTAGTGTTTGA+TGG 0.354229 6_4:+68770826 Msa0994280:five_prime_UTR
GTCTTTATTACCATTTCATC+AGG 0.357004 6_4:+68770120 Msa0994280:five_prime_UTR
ATATACAGCTCACTTTGTTC+CGG 0.357382 6_4:-68770287 None:intergenic
TCAAACTTAGGCAAATGTAT+TGG 0.361149 6_4:-68768449 None:intergenic
AATGCTTAGGCACACAAGTA+TGG 0.365629 6_4:+68772947 Msa0994280:CDS
ACTCACATTTCATCAACATT+AGG 0.371368 6_4:-68768163 None:intergenic
CCCATAGAAGGAGACATATA+AGG 0.375367 6_4:-68768118 None:intergenic
CAAACTTAGGCAAATGTATT+GGG 0.375971 6_4:-68768448 None:intergenic
TGCCAGCGTGAGGACCTCTT+TGG 0.376327 6_4:-68768622 None:intergenic
TATAAAACATGGGGTAAAAT+GGG 0.377359 6_4:+68770345 Msa0994280:five_prime_UTR
GCATCCATCTGTGGATTTCA+TGG 0.379025 6_4:+68773206 Msa0994280:CDS
ATGGGCGAGGAAGTTAAGTT+TGG 0.380276 6_4:+68773147 Msa0994280:CDS
CGGATGTATTGCGATATTCT+TGG 0.382035 6_4:-68771631 None:intergenic
CATTATCAGAAATGATAAAC+TGG 0.384420 6_4:+68771607 Msa0994280:CDS
ATTCTTGGCATTCTTCTTCA+AGG 0.392341 6_4:+68770026 Msa0994280:five_prime_UTR
CAAGGAAATGAAGGGTTTCA+TGG 0.393363 6_4:-68770979 None:intergenic
AAAATAACCACCTGATGAAA+TGG 0.395936 6_4:-68770130 None:intergenic
TGTCGAGGATCGTGTTGATT+TGG 0.396855 6_4:+68771386 Msa0994280:CDS
TATACAGCTCACTTTGTTCC+GGG 0.400953 6_4:-68770286 None:intergenic
CATTTCCTTAATCAAACTTA+GGG 0.401565 6_4:-68770687 None:intergenic
TTGTTAACAAACCCCATAGA+AGG 0.401809 6_4:-68768130 None:intergenic
CTGCATCTCAATTTCACTAC+TGG 0.410524 6_4:-68772712 None:intergenic
GTTTAAGTGAGTTGACCTTC+GGG 0.413198 6_4:+68768531 Msa0994280:five_prime_UTR
AAAGTCAGACATGGTTAGTC+AGG 0.413848 6_4:-68768482 None:intergenic
CTAACTCAAGCTTATAAAAC+CGG 0.415744 6_4:-68770458 None:intergenic
AGTTTAAGTGAGTTGACCTT+CGG 0.420584 6_4:+68768530 Msa0994280:five_prime_UTR
CATTTAACTATACATTACTT+TGG 0.420970 6_4:+68770185 Msa0994280:five_prime_UTR
GCTTATAAAACCGGGTTGTA+AGG 0.421019 6_4:-68770449 None:intergenic
GATATAACATTACTATATAC+TGG 0.422649 6_4:-68771140 None:intergenic
GTCAAAAGTTCATGGCAAAC+AGG 0.430962 6_4:+68771301 Msa0994280:exon
CAAGAGTGATGGTAATTTAT+CGG 0.432110 6_4:+68771416 Msa0994280:CDS
CTTTGGGGATTTGACAAAAT+GGG 0.434572 6_4:+68773129 Msa0994280:CDS
GATGTCAAATTGCTGCAAAC+AGG 0.434612 6_4:+68773070 Msa0994280:CDS
GTGGTGGAGGTGGTACTAAC+TGG 0.443388 6_4:-68770887 None:intergenic
CGATAAAGCCCAAATCGATT+AGG 0.443626 6_4:-68770762 None:intergenic
GAAGTAGAGTCAAAAGTTCA+TGG 0.446925 6_4:+68771293 Msa0994280:exon
AATCTGTGAATAATATCTAA+TGG 0.449540 6_4:+68771061 Msa0994280:five_prime_UTR
TGAAAATCATTGAGAATTGA+TGG 0.453425 6_4:-68770909 None:intergenic
TTTACTGAGTTTCATGGAAA+CGG 0.454608 6_4:+68771354 Msa0994280:CDS
CGATTTGGGCTTTATCGGAC+TGG 0.454922 6_4:+68770768 Msa0994280:five_prime_UTR
CTACAGAAACAGAACTTGTT+GGG 0.459894 6_4:+68772992 Msa0994280:CDS
AACCATCAAACACTAATACT+AGG 0.460538 6_4:-68770828 None:intergenic
AAGAAACTGAAGCTTGAATT+GGG 0.460548 6_4:+68773093 Msa0994280:CDS
TAGTTACCAGCTAGAGGTCT+TGG 0.460751 6_4:+68771028 Msa0994280:five_prime_UTR
ATCTTTAAGAATGAAGTTCA+AGG 0.460830 6_4:+68768213 Msa0994280:five_prime_UTR
TATAATTTAGAATTTGAGTT+GGG 0.461279 6_4:-68770482 None:intergenic
GTGATAAATTCCTTCACATA+TGG 0.461980 6_4:+68770156 Msa0994280:five_prime_UTR
TTTGATCCTGAGGAGTATAA+AGG 0.463612 6_4:+68771654 Msa0994280:CDS
GTCCATATCAAGAAGCTGTA+TGG 0.463848 6_4:+68768065 Msa0994280:five_prime_UTR
TGCTATCTTTGCACAGTATG+AGG 0.463866 6_4:-68767160 None:intergenic
AAACTACACCAGTACATTGC+GGG 0.464290 6_4:-68772909 None:intergenic
TTATCGGACTGGACTAAAAT+GGG 0.468775 6_4:+68770779 Msa0994280:five_prime_UTR
CAGCGTGAGGACCTCTTTGG+AGG 0.470122 6_4:-68768619 None:intergenic
GTTTATCATTCACTTGTTTG+TGG 0.470731 6_4:+68773387 Msa0994280:three_prime_UTR
GAGGTCCTCACGCTGGCAAT+GGG 0.471561 6_4:+68768627 Msa0994280:five_prime_UTR
TCATGGCAGTGTGAAAAGAT+AGG 0.472141 6_4:-68770962 None:intergenic
TTGCTGCTTGCTTAATGTGA+TGG 0.473325 6_4:+68770240 Msa0994280:five_prime_UTR
TACCATCAACATATATAAAA+GGG 0.476086 6_4:+68771202 Msa0994280:five_prime_UTR
ACTACAGAAACAGAACTTGT+TGG 0.476498 6_4:+68772991 Msa0994280:CDS
GTGGAACTCCCGCAATGTAC+TGG 0.476663 6_4:+68772901 Msa0994280:CDS
TTCGATGATGACCCACTGTC+TGG 0.477069 6_4:-68771744 None:intergenic
TCATTCTCGCAAACGTAAAA+GGG 0.477895 6_4:+68771581 Msa0994280:CDS
TTTCAGTTTCAAGGCGATCA+AGG 0.482418 6_4:-68771329 None:intergenic
TGGCCACCTTTATACTCCTC+AGG 0.485872 6_4:-68771660 None:intergenic
AGAGGTCCTCACGCTGGCAA+TGG 0.487083 6_4:+68768626 Msa0994280:five_prime_UTR
GACATATAAGGATAAACATC+AGG 0.491233 6_4:-68768106 None:intergenic
CAGTGACAACAAGGAAATGA+AGG 0.492989 6_4:-68770988 None:intergenic
CTACGAGTTCTTCCTCAGAA+TGG 0.493368 6_4:-68773285 None:intergenic
GAGTGTAGCTGCAACGTTCA+AGG 0.494639 6_4:+68773030 Msa0994280:CDS
ATCTTCTTCACCTTCTGTAA+AGG 0.495424 6_4:-68772667 None:intergenic
ACTAGTCATGTTCGTTTCCA+GGG 0.500474 6_4:-68768242 None:intergenic
TTGTTCCGGGAGATAACTCC+CGG 0.504888 6_4:-68770273 None:intergenic
CACCTCCGGGAGTTATCTCC+CGG 0.506086 6_4:+68770268 Msa0994280:five_prime_UTR
ACTTGTCTTAAAATATCATC+AGG 0.507538 6_4:-68773366 None:intergenic
TTGGCATTCTTCTTCAAGGT+CGG 0.511031 6_4:+68770030 Msa0994280:five_prime_UTR
ACCATCAAACACTAATACTA+GGG 0.512056 6_4:-68770827 None:intergenic
TTATACTCCTCAGGATCAAA+CGG 0.517934 6_4:-68771651 None:intergenic
GAGAGTGACTCTAAATGCTT+AGG 0.519975 6_4:+68772934 Msa0994280:CDS
AGAATTGATGGTGGTGGAGG+TGG 0.521806 6_4:-68770897 None:intergenic
GATGCATCCTGCCATGTATG+AGG 0.522667 6_4:+68772687 Msa0994280:CDS
GAAGTTCAAGGTTCAAGCCC+TGG 0.523038 6_4:+68768225 Msa0994280:five_prime_UTR
TTTATTACCATTTCATCAGG+TGG 0.531191 6_4:+68770123 Msa0994280:five_prime_UTR
ATAAATTACCATCACTCTTG+TGG 0.532243 6_4:-68771413 None:intergenic
AAGTTTGGATCATTTGGGGA+TGG 0.535099 6_4:+68773162 Msa0994280:CDS
TGAGGAGTATAAAGGTGGCC+AGG 0.539042 6_4:+68771662 Msa0994280:CDS
CAAATTCTAAATTATATACA+AGG 0.539254 6_4:+68770489 Msa0994280:five_prime_UTR
GGACTGGACTAAAATGGGCC+TGG 0.541149 6_4:+68770784 Msa0994280:five_prime_UTR
CACTACTGGATCCTCATACA+TGG 0.542824 6_4:-68772698 None:intergenic
CTCAGAAGTTTCCACAGAAG+AGG 0.547333 6_4:-68771550 None:intergenic
ACATATATAAAAGGGCAAGC+TGG 0.548326 6_4:+68771210 Msa0994280:five_prime_UTR
TTGAGAATTGATGGTGGTGG+AGG 0.549041 6_4:-68770900 None:intergenic
CAAGTACCTTTGTTAGCGCT+CGG 0.550734 6_4:-68768588 None:intergenic
TTCTGAAACTCCTTTACAGA+AGG 0.551096 6_4:+68772657 Msa0994280:CDS
AGTTGAACACATGACATTGC+AGG 0.555423 6_4:+68768650 Msa0994280:five_prime_UTR
ATGTGATGGAAACACACCTC+CGG 0.557626 6_4:+68770254 Msa0994280:five_prime_UTR
ATGTATTAGTTACCAGCTAG+AGG 0.561179 6_4:+68771022 Msa0994280:five_prime_UTR
AAAATTCAGCACTGGTGTCA+AGG 0.561375 6_4:+68771515 Msa0994280:CDS
TTCAGTTTCAAGGCGATCAA+GGG 0.564552 6_4:-68771328 None:intergenic
TAGGGTCAGGGTAGGCCGCA+AGG 0.566444 6_4:+68768561 Msa0994280:five_prime_UTR
GGGTTCACTAGGGTCAGGGT+AGG 0.566871 6_4:+68768553 Msa0994280:five_prime_UTR
AGCGTGAGGACCTCTTTGGA+GGG 0.568117 6_4:-68768618 None:intergenic
TGTGATGGAAACACACCTCC+GGG 0.570064 6_4:+68770255 Msa0994280:five_prime_UTR
ATATAATTTAGAATTTGAGT+TGG 0.570361 6_4:-68770483 None:intergenic
TTGGTTAACCACAAGAGTGA+TGG 0.581825 6_4:+68771405 Msa0994280:CDS
CTTATATGTCTCCTTCTATG+GGG 0.582249 6_4:+68768119 Msa0994280:five_prime_UTR
TTAGCGCTCGGCGAGCCTTG+CGG 0.583831 6_4:-68768576 None:intergenic
CAATCTAGCCACCTCTTCTG+TGG 0.585326 6_4:+68771539 Msa0994280:CDS
ACTGGATCCTCATACATGGC+AGG 0.586396 6_4:-68772694 None:intergenic
TAATGACCAAGACCTCTAGC+TGG 0.589246 6_4:-68771034 None:intergenic
TAACGGTGATGATGGTAATG+AGG 0.590152 6_4:+68771482 Msa0994280:CDS
AACCAAAACAACAAATGTGA+GGG 0.590681 6_4:+68771447 Msa0994280:CDS
CTCCAAAGAGGTCCTCACGC+TGG 0.590811 6_4:+68768620 Msa0994280:five_prime_UTR
ACATTTCATCAACATTAGGA+TGG 0.594673 6_4:-68768159 None:intergenic
GGCATGCAATAATCAAACTT+AGG 0.595326 6_4:-68768461 None:intergenic
TGAAATTGAGATGCAGTGAA+AGG 0.595942 6_4:+68772719 Msa0994280:CDS
GAATTTGATCACAAAACTAG+AGG 0.597569 6_4:-68771253 None:intergenic
AATACATCCGTTTGATCCTG+AGG 0.597851 6_4:+68771644 Msa0994280:CDS
CACTCCATGAAATCCACAGA+TGG 0.598826 6_4:-68773210 None:intergenic
GGGCCTAAGAGATATGGAGG+GGG 0.602058 6_4:+68770377 Msa0994280:five_prime_UTR
GGGATTTGACAAAATGGGCG+AGG 0.602480 6_4:+68773134 Msa0994280:CDS
AGAAGTTTCCACAGAAGAGG+TGG 0.603484 6_4:-68771547 None:intergenic
AAAGCATAATAATCTAAACT+AGG 0.605328 6_4:-68773417 None:intergenic
TTAAGTGAGTTGACCTTCGG+GGG 0.606710 6_4:+68768533 Msa0994280:five_prime_UTR
AGTTAAGTTTGGATCATTTG+GGG 0.607263 6_4:+68773158 Msa0994280:CDS
CTCTGGTATATATCTTCAGA+AGG 0.607599 6_4:-68770321 None:intergenic
TATACCAGAGGTATAAAACA+TGG 0.608087 6_4:+68770334 Msa0994280:five_prime_UTR
GGCTCGCCGAGCGCTAACAA+AGG 0.611461 6_4:+68768582 Msa0994280:five_prime_UTR
AATTGATAAAAGACTACGAA+GGG 0.612459 6_4:-68771090 None:intergenic
AAACCAAAACAACAAATGTG+AGG 0.612820 6_4:+68771446 Msa0994280:CDS
AATGTCAACACCATATGTGA+AGG 0.613976 6_4:-68770166 None:intergenic
ATTTAAAATGACAGTAAACA+AGG 0.614464 6_4:-68768300 None:intergenic
ACATTACTATATACTGGTGA+AGG 0.614663 6_4:-68771134 None:intergenic
GGGGCCTAAGAGATATGGAG+GGG 0.615643 6_4:+68770376 Msa0994280:five_prime_UTR
AGCATGCAGAACCAGACAGT+GGG 0.617644 6_4:+68771733 Msa0994280:CDS
GTTGCAGGAAATAAACTGCA+CGG 0.618806 6_4:+68772790 Msa0994280:CDS
TTGCAGATCACCCTCCAAAG+AGG 0.619395 6_4:+68768608 Msa0994280:five_prime_UTR
CAACTCCCATTGCCAGCGTG+AGG 0.620295 6_4:-68768632 None:intergenic
ATACCAGAGGTATAAAACAT+GGG 0.621785 6_4:+68770335 Msa0994280:five_prime_UTR
GAAGCTCTCACCTTACAACC+CGG 0.624116 6_4:+68770439 Msa0994280:five_prime_UTR
CAGTGTGGTAAGCCATTCTG+AGG 0.625655 6_4:+68773273 Msa0994280:three_prime_UTR
TGAAAACGATGACCTACAGA+TGG 0.625658 6_4:-68772877 None:intergenic
AGACAGTGGGTCATCATCGA+AGG 0.626066 6_4:+68771746 Msa0994280:CDS
AGCTATCAAGCATCCATCTG+TGG 0.633077 6_4:+68773197 Msa0994280:CDS
AGCTGTATGGAAGATAAGAG+TGG 0.635714 6_4:+68768078 Msa0994280:five_prime_UTR
TCATTGAGAATTGATGGTGG+TGG 0.644339 6_4:-68770903 None:intergenic
TAACTCAAGCTTATAAAACC+GGG 0.646677 6_4:-68770457 None:intergenic
AGTGACAACAAGGAAATGAA+GGG 0.647243 6_4:-68770987 None:intergenic
CATTTGGGGATGGTTTCGAG+AGG 0.652185 6_4:+68773172 Msa0994280:CDS
TTTAAGTGAGTTGACCTTCG+GGG 0.652377 6_4:+68768532 Msa0994280:five_prime_UTR
AAACGGCAATTGTCTTGTCG+AGG 0.655256 6_4:+68771371 Msa0994280:CDS
TCATTTCCTTGTTGTCACTG+CGG 0.657072 6_4:+68770991 Msa0994280:five_prime_UTR
TACCAGAGGTATAAAACATG+GGG 0.660109 6_4:+68770336 Msa0994280:five_prime_UTR
GATCCTGAGGAGTATAAAGG+TGG 0.663919 6_4:+68771657 Msa0994280:CDS
ATTTGGGGATGGTTTCGAGA+GGG 0.670575 6_4:+68773173 Msa0994280:CDS
GTGGGCAAGAGATGTTCTGT+CGG 0.673366 6_4:+68771704 Msa0994280:CDS
TAAACTACACCAGTACATTG+CGG 0.676923 6_4:-68772910 None:intergenic
AATTGAGATGCAGTGAAAGG+CGG 0.677176 6_4:+68772722 Msa0994280:CDS
AAGCATGCAGAACCAGACAG+TGG 0.678268 6_4:+68771732 Msa0994280:CDS
CTTGTTGGGAGAGAAAGACG+AGG 0.678364 6_4:+68773006 Msa0994280:CDS
AAAGCGGAGATGATCAACAA+TGG 0.687050 6_4:+68767323 Msa0994280:five_prime_UTR
AGTAGCAATGCTCTTCTACG+TGG 0.702940 6_4:-68769999 None:intergenic
CTTCTGAAGATATATACCAG+AGG 0.718667 6_4:+68770322 Msa0994280:five_prime_UTR
GTTGATGACTGATTGCAAAG+CGG 0.741293 6_4:+68767307 Msa0994280:five_prime_UTR
AAATTGATAAAAGACTACGA+AGG 0.744769 6_4:-68771091 None:intergenic
TTTGAGTAGACAAAACAGTG+TGG 0.748066 6_4:+68773258 Msa0994280:exon
TTCCGGGAGATAACTCCCGG+AGG 0.749314 6_4:-68770270 None:intergenic
AAATCATTGAGAATTGATGG+TGG 0.754340 6_4:-68770906 None:intergenic
GAAATGCAGCAAGAACAGCG+CGG 0.851698 6_4:-68772760 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTGAATAATTTTTTTTAC+AGG - chr6_4:68768834-68768853 None:intergenic 10.0%
!!! AAAGTCTTATATATTTTAAA+AGG - chr6_4:68768956-68768975 None:intergenic 10.0%
!!! AAAGATTAATATATTTTGTT+CGG + chr6_4:68769094-68769113 Msa0994280:intron 10.0%
!!! AAGATTTTGTAATTTTAAAA+TGG - chr6_4:68770580-68770599 None:intergenic 10.0%
!! TATAAAAAAAATCAAACTTA+GGG - chr6_4:68770727-68770746 None:intergenic 10.0%
!! GTTAATACAATAATAATATA+CGG + chr6_4:68772021-68772040 Msa0994280:intron 10.0%
!! TTAATACAATAATAATATAC+GGG + chr6_4:68772022-68772041 Msa0994280:intron 10.0%
!!! ATTTCTAATCTTTTTGTAAT+TGG + chr6_4:68767269-68767288 Msa0994280:intron 15.0%
!!! TTTCTAATCTTTTTGTAATT+GGG + chr6_4:68767270-68767289 Msa0994280:intron 15.0%
!! ATAACAATCTATAATACTAA+AGG - chr6_4:68767493-68767512 None:intergenic 15.0%
!! CATAAATAAACACAAATAAA+AGG - chr6_4:68767862-68767881 None:intergenic 15.0%
!!! TAAGATTTGTAATTTTAAAC+TGG - chr6_4:68768360-68768379 None:intergenic 15.0%
!!! ATTTTTATATTGTCTATACA+AGG + chr6_4:68768391-68768410 Msa0994280:five_prime_UTR 15.0%
!!! TTTATTTTATTGTTTTTCCA+AGG + chr6_4:68768729-68768748 Msa0994280:intron 15.0%
!!! TTATTTTATTGTTTTTCCAA+GGG + chr6_4:68768730-68768749 Msa0994280:intron 15.0%
!!! AAGATTTTGTAATTTTAAAC+TGG - chr6_4:68768909-68768928 None:intergenic 15.0%
!!! TTTTTCGTTAAAGATATATA+CGG + chr6_4:68769436-68769455 Msa0994280:intron 15.0%
!! CTACATAATGTAATTTATAA+TGG + chr6_4:68769586-68769605 Msa0994280:intron 15.0%
!! ATATAAACAAGATTTAGAAA+TGG - chr6_4:68769630-68769649 None:intergenic 15.0%
!!! ATTTCTAAATCTTGTTTATA+TGG + chr6_4:68769629-68769648 Msa0994280:intron 15.0%
!!! TTTCTAAATCTTGTTTATAT+GGG + chr6_4:68769630-68769649 Msa0994280:intron 15.0%
!!! ATGTAAAATTGTTGTTTAAA+TGG + chr6_4:68769956-68769975 Msa0994280:intron 15.0%
!!! TATAATTTAGAATTTGAGTT+GGG - chr6_4:68770485-68770504 None:intergenic 15.0%
!!! ATATAATTTAGAATTTGAGT+TGG - chr6_4:68770486-68770505 None:intergenic 15.0%
!! CAAATTCTAAATTATATACA+AGG + chr6_4:68770489-68770508 Msa0994280:five_prime_UTR 15.0%
!! ATAAAAAAAATCAAACTTAG+GGG - chr6_4:68770726-68770745 None:intergenic 15.0%
!! CTATAAAAAAAATCAAACTT+AGG - chr6_4:68770728-68770747 None:intergenic 15.0%
!!! AGTTTGATTTTTTTTATAGT+AGG + chr6_4:68770729-68770748 Msa0994280:five_prime_UTR 15.0%
!!! GAATTTATGTGTATTATTTT+AGG - chr6_4:68771963-68771982 None:intergenic 15.0%
!! TGGAAAATAAAAATAACAAA+TGG + chr6_4:68772334-68772353 Msa0994280:intron 15.0%
!! GGAAAATAAAAATAACAAAT+GGG + chr6_4:68772335-68772354 Msa0994280:intron 15.0%
!!! TTTTTTTGAAGAAAATATCA+TGG - chr6_4:68772626-68772645 None:intergenic 15.0%
!! GAAGAAAAAAATTGATACAA+GGG - chr6_4:68767405-68767424 None:intergenic 20.0%
!! AGAAGAAAAAAATTGATACA+AGG - chr6_4:68767406-68767425 None:intergenic 20.0%
!! TAAAGGAATAACATTTCAAT+TGG - chr6_4:68767476-68767495 None:intergenic 20.0%
!! TATAATTACACTGAATTACA+TGG - chr6_4:68767592-68767611 None:intergenic 20.0%
!!! AGTTGTTCATTATTTTCTAA+GGG + chr6_4:68768183-68768202 Msa0994280:five_prime_UTR 20.0%
!!! AAGGAAGCATTTTATTTTAT+AGG - chr6_4:68768284-68768303 None:intergenic 20.0%
!!! ATTTAAAATGACAGTAAACA+AGG - chr6_4:68768303-68768322 None:intergenic 20.0%
!! AATAAAAATAAAGTCAGACA+TGG - chr6_4:68768494-68768513 None:intergenic 20.0%
!!! TCTTTTAGATGTATAGAATA+GGG - chr6_4:68769323-68769342 None:intergenic 20.0%
!!! ATCTTTTAGATGTATAGAAT+AGG - chr6_4:68769324-68769343 None:intergenic 20.0%
!!! TTCTAAATCTTGTTTATATG+GGG + chr6_4:68769631-68769650 Msa0994280:intron 20.0%
!!! GTTATAAGAAACAAATTTTG+CGG + chr6_4:68769681-68769700 Msa0994280:intron 20.0%
!! AAAGTTATAGGGTTAATATT+AGG + chr6_4:68769819-68769838 Msa0994280:intron 20.0%
!! CATTTAACTATACATTACTT+TGG + chr6_4:68770185-68770204 Msa0994280:five_prime_UTR 20.0%
!!! ATTTTATAGACGATATCTAT+TGG + chr6_4:68770209-68770228 Msa0994280:five_prime_UTR 20.0%
!! TGACATGAAAATCTTATATA+TGG - chr6_4:68770634-68770653 None:intergenic 20.0%
!! TAAAAAAAATCAAACTTAGG+GGG - chr6_4:68770725-68770744 None:intergenic 20.0%
!! GATATAACATTACTATATAC+TGG - chr6_4:68771143-68771162 None:intergenic 20.0%
!! TACCATCAACATATATAAAA+GGG + chr6_4:68771202-68771221 Msa0994280:five_prime_UTR 20.0%
!!! TTATACATGATTTTACACAT+TGG + chr6_4:68771794-68771813 Msa0994280:intron 20.0%
!!! ACAGATCTAATAAATTTTCT+CGG - chr6_4:68772261-68772280 None:intergenic 20.0%
!! TTTATTAGATCTGTATTACA+AGG + chr6_4:68772267-68772286 Msa0994280:intron 20.0%
!! AAAGCATAATAATCTAAACT+AGG - chr6_4:68773420-68773439 None:intergenic 20.0%
! GTTAGAAACTTACTATGTTT+AGG - chr6_4:68767380-68767399 None:intergenic 25.0%
!! TGGTTTTCTCAAATTATTTG+CGG - chr6_4:68767572-68767591 None:intergenic 25.0%
! TTCAGTGTAATTATATGTGT+CGG + chr6_4:68767597-68767616 Msa0994280:intron 25.0%
!!! TGTTATCACTCACTTTTATT+AGG + chr6_4:68768031-68768050 Msa0994280:intron 25.0%
!! GAGTTGTTCATTATTTTCTA+AGG + chr6_4:68768182-68768201 Msa0994280:five_prime_UTR 25.0%
!! ATCTTTAAGAATGAAGTTCA+AGG + chr6_4:68768213-68768232 Msa0994280:five_prime_UTR 25.0%
! AACTCACATTACATAACATT+TGG - chr6_4:68768711-68768730 None:intergenic 25.0%
!!! AGTTTTAAGAAGAAAGTTCA+GGG + chr6_4:68768763-68768782 Msa0994280:intron 25.0%
! TGATAAAATCTAACCTGATT+AGG - chr6_4:68769046-68769065 None:intergenic 25.0%
!!! GTAAAAAAGGAATTTTAAGG+GGG - chr6_4:68769300-68769319 None:intergenic 25.0%
!! GGTAAAAAAGGAATTTTAAG+GGG - chr6_4:68769301-68769320 None:intergenic 25.0%
!! GGGTAAAAAAGGAATTTTAA+GGG - chr6_4:68769302-68769321 None:intergenic 25.0%
!! CTTTTAGATGTATAGAATAG+GGG - chr6_4:68769322-68769341 None:intergenic 25.0%
!!! GTATGTTTTTAGATTTTACC+TGG + chr6_4:68769388-68769407 Msa0994280:intron 25.0%
! TTTAACGAAAAAATACTTCC+GGG - chr6_4:68769428-68769447 None:intergenic 25.0%
! CTTTAACGAAAAAATACTTC+CGG - chr6_4:68769429-68769448 None:intergenic 25.0%
! AGATATATACGGTATCTAAA+AGG + chr6_4:68769447-68769466 Msa0994280:intron 25.0%
!!! CACTTAATTTAATTTTGCTG+AGG - chr6_4:68770095-68770114 None:intergenic 25.0%
! TATATATCTTCAGAAGGATT+TGG - chr6_4:68770318-68770337 None:intergenic 25.0%
! TATAAAACATGGGGTAAAAT+GGG + chr6_4:68770345-68770364 Msa0994280:five_prime_UTR 25.0%
!! GTGTAGTTTTTATAAAGCTT+GGG + chr6_4:68770417-68770436 Msa0994280:five_prime_UTR 25.0%
! CATTTCCTTAATCAAACTTA+GGG - chr6_4:68770690-68770709 None:intergenic 25.0%
!! TTTGATTAAGGAAATGGATT+TGG + chr6_4:68770694-68770713 Msa0994280:five_prime_UTR 25.0%
! TGAAAATCATTGAGAATTGA+TGG - chr6_4:68770912-68770931 None:intergenic 25.0%
!! ATCAATTCTCAATGATTTTC+AGG + chr6_4:68770911-68770930 Msa0994280:five_prime_UTR 25.0%
! AATTGATAAAAGACTACGAA+GGG - chr6_4:68771093-68771112 None:intergenic 25.0%
! AAATTGATAAAAGACTACGA+AGG - chr6_4:68771094-68771113 None:intergenic 25.0%
! GTACCATCAACATATATAAA+AGG + chr6_4:68771201-68771220 Msa0994280:five_prime_UTR 25.0%
! CATTATCAGAAATGATAAAC+TGG + chr6_4:68771607-68771626 Msa0994280:CDS 25.0%
! AAGATATAATCGCAATCTAT+CGG + chr6_4:68771930-68771949 Msa0994280:intron 25.0%
! AATAATAATATACGGGAAGT+TGG + chr6_4:68772029-68772048 Msa0994280:intron 25.0%
!!! CTTTAACTTGAACTTGTAAA+TGG - chr6_4:68772303-68772322 None:intergenic 25.0%
!! CATTTACAAGTTCAAGTTAA+AGG + chr6_4:68772301-68772320 Msa0994280:intron 25.0%
! AAAAAATTTAAGCCATCTGT+AGG + chr6_4:68772865-68772884 Msa0994280:CDS 25.0%
! AAGTTAAGTTTGGATCATTT+GGG + chr6_4:68773157-68773176 Msa0994280:CDS 25.0%
! ACTTGTCTTAAAATATCATC+AGG - chr6_4:68773369-68773388 None:intergenic 25.0%
ATGTTTCAATCTATGAAACG+CGG + chr6_4:68767513-68767532 Msa0994280:intron 30.0%
ATAGGTTTCAATTCAATGTG+TGG + chr6_4:68767682-68767701 Msa0994280:intron 30.0%
GGAAAATAAGCAAACAAGTA+AGG - chr6_4:68767745-68767764 None:intergenic 30.0%
!! TTTGCTTATTTTCCTCAATG+AGG + chr6_4:68767751-68767770 Msa0994280:intron 30.0%
!! CGACAAAAAGTTATTTCTCT+TGG - chr6_4:68767813-68767832 None:intergenic 30.0%
TAACACAATTGTGACTTTAG+AGG + chr6_4:68767977-68767996 Msa0994280:intron 30.0%
AACACAATTGTGACTTTAGA+GGG + chr6_4:68767978-68767997 Msa0994280:intron 30.0%
GACATATAAGGATAAACATC+AGG - chr6_4:68768109-68768128 None:intergenic 30.0%
ACATTTCATCAACATTAGGA+TGG - chr6_4:68768162-68768181 None:intergenic 30.0%
ACTCACATTTCATCAACATT+AGG - chr6_4:68768166-68768185 None:intergenic 30.0%
CAAACTTAGGCAAATGTATT+GGG - chr6_4:68768451-68768470 None:intergenic 30.0%
TCAAACTTAGGCAAATGTAT+TGG - chr6_4:68768452-68768471 None:intergenic 30.0%
CACATTACATAACATTTGGA+TGG - chr6_4:68768707-68768726 None:intergenic 30.0%
CTTTCTTCTTAAAACTCTTC+AGG - chr6_4:68768759-68768778 None:intergenic 30.0%
!!! GAGTTTTAAGAAGAAAGTTC+AGG + chr6_4:68768762-68768781 Msa0994280:intron 30.0%
! GGGGTAAAAAAGGAATTTTA+AGG - chr6_4:68769303-68769322 None:intergenic 30.0%
GTATAGAATAGGGGTAAAAA+AGG - chr6_4:68769313-68769332 None:intergenic 30.0%
TGCTGAAGAAAAATGGAAAT+GGG + chr6_4:68769704-68769723 Msa0994280:intron 30.0%
TCCCACATTTGAAAAGTTAT+AGG + chr6_4:68769807-68769826 Msa0994280:intron 30.0%
! CCCTATAACTTTTCAAATGT+GGG - chr6_4:68769811-68769830 None:intergenic 30.0%
CCCACATTTGAAAAGTTATA+GGG + chr6_4:68769808-68769827 Msa0994280:intron 30.0%
! ACCCTATAACTTTTCAAATG+TGG - chr6_4:68769812-68769831 None:intergenic 30.0%
GCATTGCTACTATTTATTCT+TGG + chr6_4:68769482-68769501 Msa0994280:intron 30.0%
GTCTTTATTACCATTTCATC+AGG + chr6_4:68770120-68770139 Msa0994280:five_prime_UTR 30.0%
TTTATTACCATTTCATCAGG+TGG + chr6_4:68770123-68770142 Msa0994280:five_prime_UTR 30.0%
AAAATAACCACCTGATGAAA+TGG - chr6_4:68770133-68770152 None:intergenic 30.0%
GTGATAAATTCCTTCACATA+TGG + chr6_4:68770156-68770175 Msa0994280:five_prime_UTR 30.0%
! TATACCAGAGGTATAAAACA+TGG + chr6_4:68770334-68770353 Msa0994280:five_prime_UTR 30.0%
! ATACCAGAGGTATAAAACAT+GGG + chr6_4:68770335-68770354 Msa0994280:five_prime_UTR 30.0%
GTATAAAACATGGGGTAAAA+TGG + chr6_4:68770344-68770363 Msa0994280:five_prime_UTR 30.0%
! CGTGTAGTTTTTATAAAGCT+TGG + chr6_4:68770416-68770435 Msa0994280:five_prime_UTR 30.0%
TAACTCAAGCTTATAAAACC+GGG - chr6_4:68770460-68770479 None:intergenic 30.0%
CTAACTCAAGCTTATAAAAC+CGG - chr6_4:68770461-68770480 None:intergenic 30.0%
CAAACTTAGGGAAATGTATT+TGG - chr6_4:68770678-68770697 None:intergenic 30.0%
CATTTCCCTAAGTTTGATTA+AGG + chr6_4:68770682-68770701 Msa0994280:five_prime_UTR 30.0%
CCATTTCCTTAATCAAACTT+AGG - chr6_4:68770691-68770710 None:intergenic 30.0%
CCTAAGTTTGATTAAGGAAA+TGG + chr6_4:68770688-68770707 Msa0994280:five_prime_UTR 30.0%
ACCATCAAACACTAATACTA+GGG - chr6_4:68770830-68770849 None:intergenic 30.0%
AACCATCAAACACTAATACT+AGG - chr6_4:68770831-68770850 None:intergenic 30.0%
AAATCATTGAGAATTGATGG+TGG - chr6_4:68770909-68770928 None:intergenic 30.0%
ACATTACTATATACTGGTGA+AGG - chr6_4:68771137-68771156 None:intergenic 30.0%
! TGCCCTTTTATATATGTTGA+TGG - chr6_4:68771207-68771226 None:intergenic 30.0%
GAATTTGATCACAAAACTAG+AGG - chr6_4:68771256-68771275 None:intergenic 30.0%
CAGTAAAAGTTTCAGTTTCA+AGG - chr6_4:68771341-68771360 None:intergenic 30.0%
! GAAACTTTTACTGAGTTTCA+TGG + chr6_4:68771348-68771367 Msa0994280:CDS 30.0%
TTTACTGAGTTTCATGGAAA+CGG + chr6_4:68771354-68771373 Msa0994280:CDS 30.0%
ATAAATTACCATCACTCTTG+TGG - chr6_4:68771416-68771435 None:intergenic 30.0%
CAAGAGTGATGGTAATTTAT+CGG + chr6_4:68771416-68771435 Msa0994280:CDS 30.0%
AAACCAAAACAACAAATGTG+AGG + chr6_4:68771446-68771465 Msa0994280:CDS 30.0%
AACCAAAACAACAAATGTGA+GGG + chr6_4:68771447-68771466 Msa0994280:CDS 30.0%
! CATCATCACCGTTAAAATTT+TGG - chr6_4:68771476-68771495 None:intergenic 30.0%
!! CAAAATTTTAACGGTGATGA+TGG + chr6_4:68771474-68771493 Msa0994280:CDS 30.0%
!! ATGTGAAAATATTCTGGTTC+AGG - chr6_4:68771840-68771859 None:intergenic 30.0%
CCATTCATGTGAAAATATTC+TGG - chr6_4:68771846-68771865 None:intergenic 30.0%
! CCAGAATATTTTCACATGAA+TGG + chr6_4:68771843-68771862 Msa0994280:intron 30.0%
! TTACAAGTTCAAGTTAAAGG+AGG + chr6_4:68772304-68772323 Msa0994280:intron 30.0%
! TACAAGTTCAAGTTAAAGGA+GGG + chr6_4:68772305-68772324 Msa0994280:intron 30.0%
!! GTTCAAGTTGAACATGTTAA+CGG - chr6_4:68772422-68772441 None:intergenic 30.0%
TTAACATGTTCAACTTGAAC+TGG + chr6_4:68772422-68772441 Msa0994280:intron 30.0%
TAACATGTTCAACTTGAACT+GGG + chr6_4:68772423-68772442 Msa0994280:intron 30.0%
AAATCATGCAGTTCAAATTC+AGG - chr6_4:68772451-68772470 None:intergenic 30.0%
! CTTTTTATTCACAACTGCTT+TGG - chr6_4:68772845-68772864 None:intergenic 30.0%
AAGAAACTGAAGCTTGAATT+GGG + chr6_4:68773093-68773112 Msa0994280:CDS 30.0%
GAAGTTAAGTTTGGATCATT+TGG + chr6_4:68773156-68773175 Msa0994280:CDS 30.0%
AGTTAAGTTTGGATCATTTG+GGG + chr6_4:68773158-68773177 Msa0994280:CDS 30.0%
GTTTATCATTCACTTGTTTG+TGG + chr6_4:68773387-68773406 Msa0994280:three_prime_UTR 30.0%
! TTCTGCTTGTGCTTCTATTT+TGG + chr6_4:68767108-68767127 Msa0994280:five_prime_UTR 35.0%
! TAATTGGGTTGTTGTGAATC+AGG + chr6_4:68767285-68767304 Msa0994280:intron 35.0%
TCTCAAATTATTTGCGGAGT+CGG - chr6_4:68767566-68767585 None:intergenic 35.0%
! GTAATTATATGTGTCGGTGT+CGG + chr6_4:68767603-68767622 Msa0994280:intron 35.0%
TATGAAGCATGTACACTTCT+CGG - chr6_4:68767665-68767684 None:intergenic 35.0%
AATGCAATTCATCCTCATTG+AGG - chr6_4:68767766-68767785 None:intergenic 35.0%
CAATGAGGATGAATTGCATT+AGG + chr6_4:68767766-68767785 Msa0994280:intron 35.0%
! ACACAATTGTGACTTTAGAG+GGG + chr6_4:68767979-68767998 Msa0994280:intron 35.0%
! CTTTTATTAGGACTCATTGC+AGG + chr6_4:68768043-68768062 Msa0994280:intron 35.0%
TTCCATACAGCTTCTTGATA+TGG - chr6_4:68768070-68768089 None:intergenic 35.0%
TCCTTATATGTCTCCTTCTA+TGG + chr6_4:68768117-68768136 Msa0994280:five_prime_UTR 35.0%
CCTTATATGTCTCCTTCTAT+GGG + chr6_4:68768118-68768137 Msa0994280:five_prime_UTR 35.0%
CTTATATGTCTCCTTCTATG+GGG + chr6_4:68768119-68768138 Msa0994280:five_prime_UTR 35.0%
TTGTTAACAAACCCCATAGA+AGG - chr6_4:68768133-68768152 None:intergenic 35.0%
GGCATGCAATAATCAAACTT+AGG - chr6_4:68768464-68768483 None:intergenic 35.0%
! AGTTTAAGTGAGTTGACCTT+CGG + chr6_4:68768530-68768549 Msa0994280:five_prime_UTR 35.0%
AAATCTAACCTGATTAGGAC+AGG - chr6_4:68769041-68769060 None:intergenic 35.0%
AACCAAATGTCGCAATTAGA+CGG - chr6_4:68769150-68769169 None:intergenic 35.0%
! ATCCAACACAATGAAAGTGT+TGG - chr6_4:68769188-68769207 None:intergenic 35.0%
TTCATTGTGTTGGATGTGAA+TGG + chr6_4:68769193-68769212 Msa0994280:intron 35.0%
GGCATATCTATAAGCAATGT+GGG - chr6_4:68769229-68769248 None:intergenic 35.0%
TGGCATATCTATAAGCAATG+TGG - chr6_4:68769230-68769249 None:intergenic 35.0%
AAAACATACCTCCAGAACAT+AGG - chr6_4:68769377-68769396 None:intergenic 35.0%
CATAGTCAGCAGTATATCAT+AGG - chr6_4:68769517-68769536 None:intergenic 35.0%
CTGACTATGCATTATACTGT+TGG + chr6_4:68769528-68769547 Msa0994280:intron 35.0%
GTGCTGAAGAAAAATGGAAA+TGG + chr6_4:68769703-68769722 Msa0994280:intron 35.0%
GATCATAGTACACTCAAAAC+TGG - chr6_4:68769742-68769761 None:intergenic 35.0%
TACTCGAGAAGGAATAAGTT+TGG - chr6_4:68769764-68769783 None:intergenic 35.0%
ATTATAGTCAGTACTCGAGA+AGG - chr6_4:68769775-68769794 None:intergenic 35.0%
GGGTTAATATTAGGAACAGT+AGG + chr6_4:68769828-68769847 Msa0994280:intron 35.0%
! TGGTTCTGCAGTTATCTAAA+AGG + chr6_4:68769976-68769995 Msa0994280:intron 35.0%
ATTCTTGGCATTCTTCTTCA+AGG + chr6_4:68770026-68770045 Msa0994280:five_prime_UTR 35.0%
AATGTCAACACCATATGTGA+AGG - chr6_4:68770169-68770188 None:intergenic 35.0%
ATATACAGCTCACTTTGTTC+CGG - chr6_4:68770290-68770309 None:intergenic 35.0%
CTCTGGTATATATCTTCAGA+AGG - chr6_4:68770324-68770343 None:intergenic 35.0%
! CTTCTGAAGATATATACCAG+AGG + chr6_4:68770322-68770341 Msa0994280:five_prime_UTR 35.0%
! TACCAGAGGTATAAAACATG+GGG + chr6_4:68770336-68770355 Msa0994280:five_prime_UTR 35.0%
! ATGGGGTAAAATGGGAATTT+TGG + chr6_4:68770353-68770372 Msa0994280:five_prime_UTR 35.0%
! TGGGGTAAAATGGGAATTTT+GGG + chr6_4:68770354-68770373 Msa0994280:five_prime_UTR 35.0%
!! CGGTTTTATAAGCTTGAGTT+AGG + chr6_4:68770459-68770478 Msa0994280:five_prime_UTR 35.0%
! TTGACTTGACCTAATCGATT+TGG + chr6_4:68770753-68770772 Msa0994280:five_prime_UTR 35.0%
! TGACTTGACCTAATCGATTT+GGG + chr6_4:68770754-68770773 Msa0994280:five_prime_UTR 35.0%
!! CTAATCGATTTGGGCTTTAT+CGG + chr6_4:68770763-68770782 Msa0994280:five_prime_UTR 35.0%
! TTTATCGGACTGGACTAAAA+TGG + chr6_4:68770778-68770797 Msa0994280:five_prime_UTR 35.0%
! TTATCGGACTGGACTAAAAT+GGG + chr6_4:68770779-68770798 Msa0994280:five_prime_UTR 35.0%
GGGTAGTTAAAAACATCAGT+AGG - chr6_4:68770810-68770829 None:intergenic 35.0%
ACCCTAGTATTAGTGTTTGA+TGG + chr6_4:68770826-68770845 Msa0994280:five_prime_UTR 35.0%
AGTGACAACAAGGAAATGAA+GGG - chr6_4:68770990-68771009 None:intergenic 35.0%
ATGTATTAGTTACCAGCTAG+AGG + chr6_4:68771022-68771041 Msa0994280:five_prime_UTR 35.0%
ACATATATAAAAGGGCAAGC+TGG + chr6_4:68771210-68771229 Msa0994280:five_prime_UTR 35.0%
GAAGTAGAGTCAAAAGTTCA+TGG + chr6_4:68771293-68771312 Msa0994280:exon 35.0%
!!! GAGGGTGTCCAAAATTTTAA+CGG + chr6_4:68771465-68771484 Msa0994280:CDS 35.0%
GACAATGAAAAATTCAGCAC+TGG + chr6_4:68771507-68771526 Msa0994280:CDS 35.0%
TTCATTCTCGCAAACGTAAA+AGG + chr6_4:68771580-68771599 Msa0994280:CDS 35.0%
TCATTCTCGCAAACGTAAAA+GGG + chr6_4:68771581-68771600 Msa0994280:CDS 35.0%
TTATACTCCTCAGGATCAAA+CGG - chr6_4:68771654-68771673 None:intergenic 35.0%
! TTTGATCCTGAGGAGTATAA+AGG + chr6_4:68771654-68771673 Msa0994280:CDS 35.0%
!!! ACTTTTTAGTTCAGATGCTG+TGG + chr6_4:68771685-68771704 Msa0994280:CDS 35.0%
!!! CTTTTTAGTTCAGATGCTGT+GGG + chr6_4:68771686-68771705 Msa0994280:CDS 35.0%
! TAGAGCTTTAGTTTAGAGAG+CGG - chr6_4:68772082-68772101 None:intergenic 35.0%
! CTAAACTAAAGCTCTAACCT+AGG + chr6_4:68772086-68772105 Msa0994280:intron 35.0%
! TTAGTTATTGTGAAGTGCCT+AGG - chr6_4:68772106-68772125 None:intergenic 35.0%
ACAGCCTTTACAAACTCATA+AGG + chr6_4:68772166-68772185 Msa0994280:intron 35.0%
CTTGCCTTATGAGTTTGTAA+AGG - chr6_4:68772173-68772192 None:intergenic 35.0%
CTTTACAAACTCATAAGGCA+AGG + chr6_4:68772171-68772190 Msa0994280:intron 35.0%
AGATCTGTATTACAAGGTCT+AGG + chr6_4:68772273-68772292 Msa0994280:intron 35.0%
AAGTTAAAGGAGGGATGATT+TGG + chr6_4:68772314-68772333 Msa0994280:intron 35.0%
!! ATAACAAATGGGTTGTGTTC+AGG + chr6_4:68772346-68772365 Msa0994280:intron 35.0%
TTGTAAGTGTCTCACTTTGA+CGG - chr6_4:68772488-68772507 None:intergenic 35.0%
!! TTCTGAAACTCCTTTACAGA+AGG + chr6_4:68772657-68772676 Msa0994280:CDS 35.0%
ATCTTCTTCACCTTCTGTAA+AGG - chr6_4:68772670-68772689 None:intergenic 35.0%
TGAAATTGAGATGCAGTGAA+AGG + chr6_4:68772719-68772738 Msa0994280:CDS 35.0%
TAAACTACACCAGTACATTG+CGG - chr6_4:68772913-68772932 None:intergenic 35.0%
!!! GTAGGTTTTGAATCATCAAC+AGG - chr6_4:68772973-68772992 None:intergenic 35.0%
!! ACAAGTTCTGTTTCTGTAGT+AGG - chr6_4:68772991-68773010 None:intergenic 35.0%
ACTACAGAAACAGAACTTGT+TGG + chr6_4:68772991-68773010 Msa0994280:CDS 35.0%
! CTACAGAAACAGAACTTGTT+GGG + chr6_4:68772992-68773011 Msa0994280:CDS 35.0%
GAAGAAACTGAAGCTTGAAT+TGG + chr6_4:68773092-68773111 Msa0994280:CDS 35.0%
! CTTTGGGGATTTGACAAAAT+GGG + chr6_4:68773129-68773148 Msa0994280:CDS 35.0%
TTTGAGTAGACAAAACAGTG+TGG + chr6_4:68773258-68773277 Msa0994280:exon 35.0%
TGCTATCTTTGCACAGTATG+AGG - chr6_4:68767163-68767182 None:intergenic 40.0%
!! GTTGATGACTGATTGCAAAG+CGG + chr6_4:68767307-68767326 Msa0994280:five_prime_UTR 40.0%
AAAGCGGAGATGATCAACAA+TGG + chr6_4:68767323-68767342 Msa0994280:five_prime_UTR 40.0%
AATCTATGAAACGCGGATAC+CGG + chr6_4:68767520-68767539 Msa0994280:intron 40.0%
GATTAGACGTGTTTCAGTGT+CGG - chr6_4:68767643-68767662 None:intergenic 40.0%
! GAGAAGTGTACATGCTTCAT+AGG + chr6_4:68767664-68767683 Msa0994280:intron 40.0%
AAATGTGCGTATGTTGCAGA+AGG + chr6_4:68767882-68767901 Msa0994280:intron 40.0%
! CACAATTGTGACTTTAGAGG+GGG + chr6_4:68767980-68767999 Msa0994280:intron 40.0%
GTCCATATCAAGAAGCTGTA+TGG + chr6_4:68768065-68768084 Msa0994280:five_prime_UTR 40.0%
AGCTGTATGGAAGATAAGAG+TGG + chr6_4:68768078-68768097 Msa0994280:five_prime_UTR 40.0%
CCCATAGAAGGAGACATATA+AGG - chr6_4:68768121-68768140 None:intergenic 40.0%
ACTAGTCATGTTCGTTTCCA+GGG - chr6_4:68768245-68768264 None:intergenic 40.0%
TACTAGTCATGTTCGTTTCC+AGG - chr6_4:68768246-68768265 None:intergenic 40.0%
! AAAGTCAGACATGGTTAGTC+AGG - chr6_4:68768485-68768504 None:intergenic 40.0%
! GTTTAAGTGAGTTGACCTTC+GGG + chr6_4:68768531-68768550 Msa0994280:five_prime_UTR 40.0%
! TTTAAGTGAGTTGACCTTCG+GGG + chr6_4:68768532-68768551 Msa0994280:five_prime_UTR 40.0%
AGTTGAACACATGACATTGC+AGG + chr6_4:68768650-68768669 Msa0994280:five_prime_UTR 40.0%
AGTAGTCATGTTCGTTTCCA+GGG - chr6_4:68768795-68768814 None:intergenic 40.0%
TAGTAGTCATGTTCGTTTCC+AGG - chr6_4:68768796-68768815 None:intergenic 40.0%
CAAGCGTAGGAGAATGTATT+GGG - chr6_4:68769007-68769026 None:intergenic 40.0%
TCAAGCGTAGGAGAATGTAT+TGG - chr6_4:68769008-68769027 None:intergenic 40.0%
!! CAACACAATGAAAGTGTTGG+AGG - chr6_4:68769185-68769204 None:intergenic 40.0%
CTCCAACACTTTCATTGTGT+TGG + chr6_4:68769183-68769202 Msa0994280:intron 40.0%
ATTGTGTTGGATGTGAATGG+TGG + chr6_4:68769196-68769215 Msa0994280:intron 40.0%
CGTAACGTTCAAACTACACA+TGG - chr6_4:68769250-68769269 None:intergenic 40.0%
TGAAACATTGCGCTTGGTTT+CGG + chr6_4:68769349-68769368 Msa0994280:intron 40.0%
CTGGTTATGTAGTTATCTCC+CGG + chr6_4:68769407-68769426 Msa0994280:intron 40.0%
! TGTTGGCTATGATATACTGC+TGG + chr6_4:68769545-68769564 Msa0994280:intron 40.0%
! TTTGCGGTGCTGAAGAAAAA+TGG + chr6_4:68769697-68769716 Msa0994280:intron 40.0%
!! GTACACTCAAAACTGGTCTT+TGG - chr6_4:68769735-68769754 None:intergenic 40.0%
TTGGCATTCTTCTTCAAGGT+CGG + chr6_4:68770030-68770049 Msa0994280:five_prime_UTR 40.0%
! TTGCTGCTTGCTTAATGTGA+TGG + chr6_4:68770240-68770259 Msa0994280:five_prime_UTR 40.0%
TATACAGCTCACTTTGTTCC+GGG - chr6_4:68770289-68770308 None:intergenic 40.0%
! TACCCCATGTTTTATACCTC+TGG - chr6_4:68770341-68770360 None:intergenic 40.0%
! GGGGTAAAATGGGAATTTTG+GGG + chr6_4:68770355-68770374 Msa0994280:five_prime_UTR 40.0%
! GGGTAAAATGGGAATTTTGG+GGG + chr6_4:68770356-68770375 Msa0994280:five_prime_UTR 40.0%
! GGTAAAATGGGAATTTTGGG+GGG + chr6_4:68770357-68770376 Msa0994280:five_prime_UTR 40.0%
GCTTATAAAACCGGGTTGTA+AGG - chr6_4:68770452-68770471 None:intergenic 40.0%
CGATAAAGCCCAAATCGATT+AGG - chr6_4:68770765-68770784 None:intergenic 40.0%
GTTAAAAACATCAGTAGGCC+AGG - chr6_4:68770805-68770824 None:intergenic 40.0%
!! TCATTGAGAATTGATGGTGG+TGG - chr6_4:68770906-68770925 None:intergenic 40.0%
TCATGGCAGTGTGAAAAGAT+AGG - chr6_4:68770965-68770984 None:intergenic 40.0%
CAAGGAAATGAAGGGTTTCA+TGG - chr6_4:68770982-68771001 None:intergenic 40.0%
CAGTGACAACAAGGAAATGA+AGG - chr6_4:68770991-68771010 None:intergenic 40.0%
! TCATTTCCTTGTTGTCACTG+CGG + chr6_4:68770991-68771010 Msa0994280:five_prime_UTR 40.0%
AAAAAACCGCAGTGACAACA+AGG - chr6_4:68771000-68771019 None:intergenic 40.0%
GTCAAAAGTTCATGGCAAAC+AGG + chr6_4:68771301-68771320 Msa0994280:exon 40.0%
TTCAGTTTCAAGGCGATCAA+GGG - chr6_4:68771331-68771350 None:intergenic 40.0%
TTTCAGTTTCAAGGCGATCA+AGG - chr6_4:68771332-68771351 None:intergenic 40.0%
TTGGTTAACCACAAGAGTGA+TGG + chr6_4:68771405-68771424 Msa0994280:CDS 40.0%
!!! CACCCTCACATTTGTTGTTT+TGG - chr6_4:68771452-68771471 None:intergenic 40.0%
!! TAACGGTGATGATGGTAATG+AGG + chr6_4:68771482-68771501 Msa0994280:CDS 40.0%
!! AAAATTCAGCACTGGTGTCA+AGG + chr6_4:68771515-68771534 Msa0994280:CDS 40.0%
CGGATGTATTGCGATATTCT+TGG - chr6_4:68771634-68771653 None:intergenic 40.0%
AATACATCCGTTTGATCCTG+AGG + chr6_4:68771644-68771663 Msa0994280:CDS 40.0%
GCATCTGAACTAAAAAGTCC+TGG - chr6_4:68771683-68771702 None:intergenic 40.0%
! CAAGTTTGCTCTTGTAGTCA+TGG + chr6_4:68772141-68772160 Msa0994280:intron 40.0%
CAACATCACAGGATTAGGAT+AGG - chr6_4:68772211-68772230 None:intergenic 40.0%
ACACACAACATCACAGGATT+AGG - chr6_4:68772216-68772235 None:intergenic 40.0%
TATTGCACACACAACATCAC+AGG - chr6_4:68772222-68772241 None:intergenic 40.0%
TAATTAGGGCTACAAGGGTT+AGG - chr6_4:68772377-68772396 None:intergenic 40.0%
AGTGCTAATTAGGGCTACAA+GGG - chr6_4:68772382-68772401 None:intergenic 40.0%
GTCAACTGCAGTGCTAATTA+GGG - chr6_4:68772391-68772410 None:intergenic 40.0%
! GAACATGTTAACGGATAACC+AGG - chr6_4:68772413-68772432 None:intergenic 40.0%
CTGCATCTCAATTTCACTAC+TGG - chr6_4:68772715-68772734 None:intergenic 40.0%
AATTGAGATGCAGTGAAAGG+CGG + chr6_4:68772722-68772741 Msa0994280:CDS 40.0%
TGCATTTCACTTTCTGTTGC+AGG + chr6_4:68772775-68772794 Msa0994280:CDS 40.0%
GTTGCAGGAAATAAACTGCA+CGG + chr6_4:68772790-68772809 Msa0994280:CDS 40.0%
TGAAAACGATGACCTACAGA+TGG - chr6_4:68772880-68772899 None:intergenic 40.0%
!! TGTAGGTCATCGTTTTCAAG+TGG + chr6_4:68772882-68772901 Msa0994280:CDS 40.0%
AAACTACACCAGTACATTGC+GGG - chr6_4:68772912-68772931 None:intergenic 40.0%
GAGAGTGACTCTAAATGCTT+AGG + chr6_4:68772934-68772953 Msa0994280:CDS 40.0%
AATGCTTAGGCACACAAGTA+TGG + chr6_4:68772947-68772966 Msa0994280:CDS 40.0%
GATGTCAAATTGCTGCAAAC+AGG + chr6_4:68773070-68773089 Msa0994280:CDS 40.0%
! TGGGTTCTGCATTTTACCTT+TGG + chr6_4:68773112-68773131 Msa0994280:CDS 40.0%
! GGGTTCTGCATTTTACCTTT+GGG + chr6_4:68773113-68773132 Msa0994280:CDS 40.0%
! GGTTCTGCATTTTACCTTTG+GGG + chr6_4:68773114-68773133 Msa0994280:CDS 40.0%
! CCATTTTGTCAAATCCCCAA+AGG - chr6_4:68773131-68773150 None:intergenic 40.0%
! CCTTTGGGGATTTGACAAAA+TGG + chr6_4:68773128-68773147 Msa0994280:CDS 40.0%
AAGTTTGGATCATTTGGGGA+TGG + chr6_4:68773162-68773181 Msa0994280:CDS 40.0%
CTTCGTCACTTCTCTTTCGT+TGG - chr6_4:68767202-68767221 None:intergenic 45.0%
TTTAGAGGGGGAACTGAAGT+GGG + chr6_4:68767992-68768011 Msa0994280:intron 45.0%
! TTAAGTGAGTTGACCTTCGG+GGG + chr6_4:68768533-68768552 Msa0994280:five_prime_UTR 45.0%
CAAGTACCTTTGTTAGCGCT+CGG - chr6_4:68768591-68768610 None:intergenic 45.0%
AAAACTCTTCAGGTGTCCCT+TGG - chr6_4:68768749-68768768 None:intergenic 45.0%
AAAGTTCAGGGTTCAAACCC+TGG + chr6_4:68768775-68768794 Msa0994280:intron 45.0%
GGTATGCGATAATCAAGCGT+AGG - chr6_4:68769020-68769039 None:intergenic 45.0%
ATCGCATACCTGTCCTAATC+AGG + chr6_4:68769030-68769049 Msa0994280:intron 45.0%
ATGTCGCAATTAGACGGCTA+GGG - chr6_4:68769144-68769163 None:intergenic 45.0%
AATGTCGCAATTAGACGGCT+AGG - chr6_4:68769145-68769164 None:intergenic 45.0%
AGCCGTCTAATTGCGACATT+TGG + chr6_4:68769145-68769164 Msa0994280:intron 45.0%
!! AAGTGTTGGAGGTTGCAAGA+AGG - chr6_4:68769174-68769193 None:intergenic 45.0%
AAGCCCCCTCAATATCTCTT+AGG + chr6_4:68769274-68769293 Msa0994280:intron 45.0%
TACTCCTGAAACATTGCGCT+TGG + chr6_4:68769343-68769362 Msa0994280:intron 45.0%
GAAACCAAGCGCAATGTTTC+AGG - chr6_4:68769350-68769369 None:intergenic 45.0%
GAAACATTGCGCTTGGTTTC+GGG + chr6_4:68769350-68769369 Msa0994280:intron 45.0%
CGGGAGATAACTACATAACC+AGG - chr6_4:68769409-68769428 None:intergenic 45.0%
AGTAGCAATGCTCTTCTACG+TGG - chr6_4:68769473-68769492 None:intergenic 45.0%
AGGTGTCTGTATCTGCTTGA+TGG + chr6_4:68769848-68769867 Msa0994280:intron 45.0%
AGTAGCAATGCTCTTCTACG+TGG - chr6_4:68769473-68769492 None:intergenic 45.0%
! ATGTGATGGAAACACACCTC+CGG + chr6_4:68770254-68770273 Msa0994280:five_prime_UTR 45.0%
!! TTGAGAATTGATGGTGGTGG+AGG - chr6_4:68770903-68770922 None:intergenic 45.0%
TAGTTACCAGCTAGAGGTCT+TGG + chr6_4:68771028-68771047 Msa0994280:five_prime_UTR 45.0%
TAATGACCAAGACCTCTAGC+TGG - chr6_4:68771037-68771056 None:intergenic 45.0%
AAACGGCAATTGTCTTGTCG+AGG + chr6_4:68771371-68771390 Msa0994280:CDS 45.0%
!! TGTCGAGGATCGTGTTGATT+TGG + chr6_4:68771386-68771405 Msa0994280:CDS 45.0%
AGAAGTTTCCACAGAAGAGG+TGG - chr6_4:68771550-68771569 None:intergenic 45.0%
CTCAGAAGTTTCCACAGAAG+AGG - chr6_4:68771553-68771572 None:intergenic 45.0%
! GATCCTGAGGAGTATAAAGG+TGG + chr6_4:68771657-68771676 Msa0994280:CDS 45.0%
! CAGTTAGCACGCTGAGATTT+TGG - chr6_4:68771985-68772004 None:intergenic 45.0%
TACGGGAAGTTGGATAGCTT+TGG + chr6_4:68772039-68772058 Msa0994280:intron 45.0%
!! GAGCGGTCATTTTGTAGACT+GGG - chr6_4:68772065-68772084 None:intergenic 45.0%
!! AGAGCGGTCATTTTGTAGAC+TGG - chr6_4:68772066-68772085 None:intergenic 45.0%
CAGTGCTAATTAGGGCTACA+AGG - chr6_4:68772383-68772402 None:intergenic 45.0%
GGTCAACTGCAGTGCTAATT+AGG - chr6_4:68772392-68772411 None:intergenic 45.0%
AATTAGCACTGCAGTTGACC+TGG + chr6_4:68772392-68772411 Msa0994280:intron 45.0%
CACTACTGGATCCTCATACA+TGG - chr6_4:68772701-68772720 None:intergenic 45.0%
!! AAGAACAGCGCGGTTTTGTA+GGG - chr6_4:68772753-68772772 None:intergenic 45.0%
ATGGGCGAGGAAGTTAAGTT+TGG + chr6_4:68773147-68773166 Msa0994280:CDS 45.0%
ATTTGGGGATGGTTTCGAGA+GGG + chr6_4:68773173-68773192 Msa0994280:CDS 45.0%
AGCTATCAAGCATCCATCTG+TGG + chr6_4:68773197-68773216 Msa0994280:CDS 45.0%
GCATCCATCTGTGGATTTCA+TGG + chr6_4:68773206-68773225 Msa0994280:CDS 45.0%
CACTCCATGAAATCCACAGA+TGG - chr6_4:68773213-68773232 None:intergenic 45.0%
CTACGAGTTCTTCCTCAGAA+TGG - chr6_4:68773288-68773307 None:intergenic 45.0%
! CTTTAGAGGGGGAACTGAAG+TGG + chr6_4:68767991-68768010 Msa0994280:intron 50.0%
GAAGTTCAAGGTTCAAGCCC+TGG + chr6_4:68768225-68768244 Msa0994280:five_prime_UTR 50.0%
TTGCAGATCACCCTCCAAAG+AGG + chr6_4:68768608-68768627 Msa0994280:five_prime_UTR 50.0%
TCGGAATTCCGCTTTCATCG+TGG + chr6_4:68769113-68769132 Msa0994280:intron 50.0%
CGGAATTCCGCTTTCATCGT+GGG + chr6_4:68769114-68769133 Msa0994280:intron 50.0%
TGTCGCAATTAGACGGCTAG+GGG - chr6_4:68769143-68769162 None:intergenic 50.0%
GGGCCTAAGAGATATTGAGG+GGG - chr6_4:68769280-68769299 None:intergenic 50.0%
GGGGCCTAAGAGATATTGAG+GGG - chr6_4:68769281-68769300 None:intergenic 50.0%
GGGGGCCTAAGAGATATTGA+GGG - chr6_4:68769282-68769301 None:intergenic 50.0%
AGGGGGCCTAAGAGATATTG+AGG - chr6_4:68769283-68769302 None:intergenic 50.0%
TGGTTTCGGGACCTATGTTC+TGG + chr6_4:68769363-68769382 Msa0994280:intron 50.0%
TTTCGGGACCTATGTTCTGG+AGG + chr6_4:68769366-68769385 Msa0994280:intron 50.0%
! TGTGATGGAAACACACCTCC+GGG + chr6_4:68770255-68770274 Msa0994280:five_prime_UTR 50.0%
TTGTTCCGGGAGATAACTCC+CGG - chr6_4:68770276-68770295 None:intergenic 50.0%
TTTGGGGGGCCTAAGAGATA+TGG + chr6_4:68770371-68770390 Msa0994280:five_prime_UTR 50.0%
AAGCCCCCTCCATATCTCTT+AGG - chr6_4:68770383-68770402 None:intergenic 50.0%
GAAGCTCTCACCTTACAACC+CGG + chr6_4:68770439-68770458 Msa0994280:five_prime_UTR 50.0%
! CGATTTGGGCTTTATCGGAC+TGG + chr6_4:68770768-68770787 Msa0994280:five_prime_UTR 50.0%
!! AGAATTGATGGTGGTGGAGG+TGG - chr6_4:68770900-68770919 None:intergenic 50.0%
CAATCTAGCCACCTCTTCTG+TGG + chr6_4:68771539-68771558 Msa0994280:CDS 50.0%
TGGCCACCTTTATACTCCTC+AGG - chr6_4:68771663-68771682 None:intergenic 50.0%
! TGAGGAGTATAAAGGTGGCC+AGG + chr6_4:68771662-68771681 Msa0994280:CDS 50.0%
GTGGGCAAGAGATGTTCTGT+CGG + chr6_4:68771704-68771723 Msa0994280:CDS 50.0%
AAGCATGCAGAACCAGACAG+TGG + chr6_4:68771732-68771751 Msa0994280:CDS 50.0%
AGCATGCAGAACCAGACAGT+GGG + chr6_4:68771733-68771752 Msa0994280:CDS 50.0%
TTCGATGATGACCCACTGTC+TGG - chr6_4:68771747-68771766 None:intergenic 50.0%
AGACAGTGGGTCATCATCGA+AGG + chr6_4:68771746-68771765 Msa0994280:CDS 50.0%
GATGCATCCTGCCATGTATG+AGG + chr6_4:68772687-68772706 Msa0994280:CDS 50.0%
ACTGGATCCTCATACATGGC+AGG - chr6_4:68772697-68772716 None:intergenic 50.0%
!! CAAGAACAGCGCGGTTTTGT+AGG - chr6_4:68772754-68772773 None:intergenic 50.0%
GAAATGCAGCAAGAACAGCG+CGG - chr6_4:68772763-68772782 None:intergenic 50.0%
CTTGTTGGGAGAGAAAGACG+AGG + chr6_4:68773006-68773025 Msa0994280:CDS 50.0%
GAGTGTAGCTGCAACGTTCA+AGG + chr6_4:68773030-68773049 Msa0994280:CDS 50.0%
GGGATTTGACAAAATGGGCG+AGG + chr6_4:68773134-68773153 Msa0994280:CDS 50.0%
CATTTGGGGATGGTTTCGAG+AGG + chr6_4:68773172-68773191 Msa0994280:CDS 50.0%
CAGTGTGGTAAGCCATTCTG+AGG + chr6_4:68773273-68773292 Msa0994280:three_prime_UTR 50.0%
ATCAGTTCCGGTGTCTGTGC+CGG - chr6_4:68767542-68767561 None:intergenic 55.0%
TGCGGAGTCGGTATCAGTTC+CGG - chr6_4:68767554-68767573 None:intergenic 55.0%
TTGACCTTCGGGGGTTCACT+AGG + chr6_4:68768542-68768561 Msa0994280:five_prime_UTR 55.0%
TGACCTTCGGGGGTTCACTA+GGG + chr6_4:68768543-68768562 Msa0994280:five_prime_UTR 55.0%
AGCGTGAGGACCTCTTTGGA+GGG - chr6_4:68768621-68768640 None:intergenic 55.0%
GGGGGCCTAAGAGATATGGA+GGG + chr6_4:68770375-68770394 Msa0994280:five_prime_UTR 55.0%
GGGGCCTAAGAGATATGGAG+GGG + chr6_4:68770376-68770395 Msa0994280:five_prime_UTR 55.0%
GGGCCTAAGAGATATGGAGG+GGG + chr6_4:68770377-68770396 Msa0994280:five_prime_UTR 55.0%
GGACTGGACTAAAATGGGCC+TGG + chr6_4:68770784-68770803 Msa0994280:five_prime_UTR 55.0%
! GTGGTGGAGGTGGTACTAAC+TGG - chr6_4:68770890-68770909 None:intergenic 55.0%
GTGGAACTCCCGCAATGTAC+TGG + chr6_4:68772901-68772920 Msa0994280:CDS 55.0%
TGACCCTAGTGAACCCCCGA+AGG - chr6_4:68768549-68768568 None:intergenic 60.0%
TTCGGGGGTTCACTAGGGTC+AGG + chr6_4:68768548-68768567 Msa0994280:five_prime_UTR 60.0%
TCGGGGGTTCACTAGGGTCA+GGG + chr6_4:68768549-68768568 Msa0994280:five_prime_UTR 60.0%
GGGTTCACTAGGGTCAGGGT+AGG + chr6_4:68768553-68768572 Msa0994280:five_prime_UTR 60.0%
CAGCGTGAGGACCTCTTTGG+AGG - chr6_4:68768622-68768641 None:intergenic 60.0%
CTCCAAAGAGGTCCTCACGC+TGG + chr6_4:68768620-68768639 Msa0994280:five_prime_UTR 60.0%
TGCCAGCGTGAGGACCTCTT+TGG - chr6_4:68768625-68768644 None:intergenic 60.0%
AGAGGTCCTCACGCTGGCAA+TGG + chr6_4:68768626-68768645 Msa0994280:five_prime_UTR 60.0%
GAGGTCCTCACGCTGGCAAT+GGG + chr6_4:68768627-68768646 Msa0994280:five_prime_UTR 60.0%
CAACTCCCATTGCCAGCGTG+AGG - chr6_4:68768635-68768654 None:intergenic 60.0%
CGCAATTAGACGGCTAGGGG+CGG - chr6_4:68769140-68769159 None:intergenic 60.0%
CACCTCCGGGAGTTATCTCC+CGG + chr6_4:68770268-68770287 Msa0994280:five_prime_UTR 60.0%
TTCCGGGAGATAACTCCCGG+AGG - chr6_4:68770273-68770292 None:intergenic 60.0%
GGGGGGCCTAAGAGATATGG+AGG + chr6_4:68770374-68770393 Msa0994280:five_prime_UTR 60.0%
!! CAGCGCGGTTTTGTAGGGAC+AGG - chr6_4:68772748-68772767 None:intergenic 60.0%
GCGGATACCGGCACAGACAC+CGG + chr6_4:68767532-68767551 Msa0994280:intron 65.0%
TAGGGTCAGGGTAGGCCGCA+AGG + chr6_4:68768561-68768580 Msa0994280:five_prime_UTR 65.0%
TTAGCGCTCGGCGAGCCTTG+CGG - chr6_4:68768579-68768598 None:intergenic 65.0%
GGCTCGCCGAGCGCTAACAA+AGG + chr6_4:68768582-68768601 Msa0994280:five_prime_UTR 65.0%
GGGGCGGCCCACGATGAAAG+CGG - chr6_4:68769124-68769143 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 68767082 68773479 68767082 ID=Msa0994280;Name=Msa0994280
chr6_4 mRNA 68767082 68773479 68767082 ID=Msa0994280-mRNA-1;Parent=Msa0994280;Name=Msa0994280-mRNA-1;_AED=0.12;_eAED=0.12;_QI=2119|1|1|1|0.75|0.4|5|213|355
chr6_4 exon 68767082 68767176 68767082 ID=Msa0994280-mRNA-1:exon:12664;Parent=Msa0994280-mRNA-1
chr6_4 exon 68767307 68767386 68767307 ID=Msa0994280-mRNA-1:exon:12665;Parent=Msa0994280-mRNA-1
chr6_4 exon 68768053 68768671 68768053 ID=Msa0994280-mRNA-1:exon:12666;Parent=Msa0994280-mRNA-1
chr6_4 exon 68769987 68771767 68769987 ID=Msa0994280-mRNA-1:exon:12667;Parent=Msa0994280-mRNA-1
chr6_4 exon 68772655 68773479 68772655 ID=Msa0994280-mRNA-1:exon:12668;Parent=Msa0994280-mRNA-1
chr6_4 five_prime_UTR 68767082 68767176 68767082 ID=Msa0994280-mRNA-1:five_prime_utr;Parent=Msa0994280-mRNA-1
chr6_4 five_prime_UTR 68767307 68767386 68767307 ID=Msa0994280-mRNA-1:five_prime_utr;Parent=Msa0994280-mRNA-1
chr6_4 five_prime_UTR 68768053 68768671 68768053 ID=Msa0994280-mRNA-1:five_prime_utr;Parent=Msa0994280-mRNA-1
chr6_4 five_prime_UTR 68769987 68771311 68769987 ID=Msa0994280-mRNA-1:five_prime_utr;Parent=Msa0994280-mRNA-1
chr6_4 CDS 68771312 68771767 68771312 ID=Msa0994280-mRNA-1:cds;Parent=Msa0994280-mRNA-1
chr6_4 CDS 68772655 68773266 68772655 ID=Msa0994280-mRNA-1:cds;Parent=Msa0994280-mRNA-1
chr6_4 three_prime_UTR 68773267 68773479 68773267 ID=Msa0994280-mRNA-1:three_prime_utr;Parent=Msa0994280-mRNA-1
Gene Sequence

>Msa0994280

ATGGCAAACAGGTCTTCCCTTGATCGCCTTGAAACTGAAACTTTTACTGAGTTTCATGGAAACGGCAATTGTCTTGTCGAGGATCGTGTTGATTTGGTTAACCACAAGAGTGATGGTAATTTATCGGACGCTAAAAACCAAAACAACAAATGTGAGGGTGTCCAAAATTTTAACGGTGATGATGGTAATGAGGATGACAATGAAAAATTCAGCACTGGTGTCAAGGACAATCTAGCCACCTCTTCTGTGGAAACTTCTGAGAATGAATTTCATTCTCGCAAACGTAAAAGGGAATCATTATCAGAAATGATAAACTGGACCAAGAATATCGCAATACATCCGTTTGATCCTGAGGAGTATAAAGGTGGCCAGGACTTTTTAGTTCAGATGCTGTGGGCAAGAGATGTTCTGTCGGTCAAAAAGCATGCAGAACCAGACAGTGGGTCATCATCGAAGAATTCTGAAACTCCTTTACAGAAGGTGAAGAAGATGCATCCTGCCATGTATGAGGATCCAGTAGTGAAATTGAGATGCAGTGAAAGGCGGCCTGTCCCTACAAAACCGCGCTGTTCTTGCTGCATTTCACTTTCTGTTGCAGGAAATAAACTGCACGGTTTCGTGACTGAAAACAAAAAATCAACTGCCAAAGCAGTTGTGAATAAAAAGAAAAAATTTAAGCCATCTGTAGGTCATCGTTTTCAAGTGGAACTCCCGCAATGTACTGGTGTAGTTTATGAGAGTGACTCTAAATGCTTAGGCACACAAGTATGGCCTGTTGATGATTCAAAACCTACTACAGAAACAGAACTTGTTGGGAGAGAAAGACGAGGAGAGTGTAGCTGCAACGTTCAAGGTTCTGTTGACTGTGTAAGATGTCAAATTGCTGCAAACAGGAAGAAACTGAAGCTTGAATTGGGTTCTGCATTTTACCTTTGGGGATTTGACAAAATGGGCGAGGAAGTTAAGTTTGGATCATTTGGGGATGGTTTCGAGAGGGAAGCTATCAAGCATCCATCTGTGGATTTCATGGAGTGTTTAGAGAACACGCAATGCTTTGATTTTGAGTAG
Protein sequence

>Msa0994280

MANRSSLDRLETETFTEFHGNGNCLVEDRVDLVNHKSDGNLSDAKNQNNKCEGVQNFNGDDGNEDDNEKFSTGVKDNLATSSVETSENEFHSRKRKRESLSEMINWTKNIAIHPFDPEEYKGGQDFLVQMLWARDVLSVKKHAEPDSGSSSKNSETPLQKVKKMHPAMYEDPVVKLRCSERRPVPTKPRCSCCISLSVAGNKLHGFVTENKKSTAKAVVNKKKKFKPSVGHRFQVELPQCTGVVYESDSKCLGTQVWPVDDSKPTTETELVGRERRGECSCNVQGSVDCVRCQIAANRKKLKLELGSAFYLWGFDKMGEEVKFGSFGDGFEREAIKHPSVDFMECLENTQCFDFE*