Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1007510 | ABD32736.1 | 70.518 | 251 | 33 | 4 | 25 | 239 | 138 | 383 | 1.01e-82 | 262 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1007510 | Q2HT70 | 70.518 | 251 | 33 | 4 | 25 | 239 | 138 | 383 | 4.83e-83 | 262 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1007510 | Msa1099960 | 0.807084 | 6.007001e-50 | -8.615850e-47 |
| Msa1007510 | Msa1406120 | 0.827620 | 1.414571e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1007510 | MtrunA17_Chr7g0217851 | 80.319 | 188 | 18 | 2 | 70 | 239 | 5 | 191 | 9.25e-77 | 230 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 64 sgRNAs with CRISPR-Local
Find 284 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGGCTGCTGCTGGCATCCA+AGG | 0.270786 | 7_1:-7059400 | None:intergenic |
| CTTCGATTCGGCGGAACCTT+AGG | 0.302401 | 7_1:-7057773 | None:intergenic |
| ATCCAACGGCTGGCTGCTGC+TGG | 0.310560 | 7_1:-7059409 | None:intergenic |
| TTCTACTTCCTATGCATACT+TGG | 0.364427 | 7_1:+7059661 | Msa1007510:three_prime_UTR |
| GTGTACTATGAAATGGCTTT+AGG | 0.378026 | 7_1:+7059570 | Msa1007510:three_prime_UTR |
| GTGCACATGCCAACACAATA+TGG | 0.384828 | 7_1:+7058985 | Msa1007510:CDS |
| AGTTATAAATATCGTTTCTC+TGG | 0.393499 | 7_1:-7059606 | None:intergenic |
| TGAGGATAAAGCTGCTGTTC+AGG | 0.399727 | 7_1:+7059464 | Msa1007510:CDS |
| CGCCCAACTACTCTAGATAT+TGG | 0.405683 | 7_1:+7059503 | Msa1007510:exon |
| CAATACATTAAATAGTAATC+TGG | 0.405959 | 7_1:-7059774 | None:intergenic |
| TGGCTGCTGCTGGCATCCAA+GGG | 0.406161 | 7_1:-7059399 | None:intergenic |
| GTGAAGCTGTATCATCTTCA+TGG | 0.410616 | 7_1:-7058951 | None:intergenic |
| GGTCCAATATCTAGAGTAGT+TGG | 0.412830 | 7_1:-7059506 | None:intergenic |
| TACTCTAGATATTGGACCTT+AGG | 0.416174 | 7_1:+7059511 | Msa1007510:exon |
| CTTCGGAAATTCCTTCGATT+CGG | 0.419342 | 7_1:-7057785 | None:intergenic |
| CTGCATAACTGACCTTAGTT+AGG | 0.426847 | 7_1:+7059730 | Msa1007510:three_prime_UTR |
| TTATGATCAGATTTATCATC+AGG | 0.427079 | 7_1:+7058123 | Msa1007510:CDS |
| CTCTTATTCTAAATTCACTC+TGG | 0.436351 | 7_1:+7058562 | Msa1007510:CDS |
| AAGTATGCATAGGAAGTAGA+AGG | 0.450332 | 7_1:-7059659 | None:intergenic |
| GGCATGTGCACAGGTTGAAT+TGG | 0.460863 | 7_1:-7058973 | None:intergenic |
| CAACAACTCGTTCGTTCCCA+TGG | 0.466615 | 7_1:+7057905 | Msa1007510:CDS |
| ATAAAGCTGCTGTTCAGGAG+GGG | 0.477624 | 7_1:+7059469 | Msa1007510:CDS |
| TGCCAGCAGCAGCCAGCCGT+TGG | 0.479830 | 7_1:+7059407 | Msa1007510:CDS |
| TATTGTGTTGGCATGTGCAC+AGG | 0.498215 | 7_1:-7058982 | None:intergenic |
| ACCACCTTGCCATATTGTGT+TGG | 0.505366 | 7_1:-7058994 | None:intergenic |
| GTTGCAAGTGTACTATGAAA+TGG | 0.509066 | 7_1:+7059563 | Msa1007510:three_prime_UTR |
| TGAAAATGATATGAAGCCCT+TGG | 0.509252 | 7_1:+7059383 | Msa1007510:CDS |
| CTAAGGTTCCGCCGAATCGA+AGG | 0.510517 | 7_1:+7057774 | Msa1007510:CDS |
| TAAAGCTGCTGTTCAGGAGG+GGG | 0.518520 | 7_1:+7059470 | Msa1007510:CDS |
| TCGTTCGTTCCCATGGGTGG+AGG | 0.527930 | 7_1:+7057912 | Msa1007510:CDS |
| CGGAAATTCCTTCGATTCGG+CGG | 0.529088 | 7_1:-7057782 | None:intergenic |
| AGCCTCTTCTGCTAATCGAC+GGG | 0.530366 | 7_1:-7058433 | None:intergenic |
| GTCCAATATCTAGAGTAGTT+GGG | 0.530987 | 7_1:-7059505 | None:intergenic |
| TTTCAATTCAACAACAACTC+AGG | 0.534892 | 7_1:+7057742 | Msa1007510:CDS |
| GATAAAGCTGCTGTTCAGGA+GGG | 0.535418 | 7_1:+7059468 | Msa1007510:CDS |
| ACAGGCCCGCAAAGCAAAAG+AGG | 0.538823 | 7_1:+7058527 | Msa1007510:CDS |
| TGTTGAGCTCATCCAACGGC+TGG | 0.538954 | 7_1:-7059419 | None:intergenic |
| AACAACTCGTTCGTTCCCAT+GGG | 0.544415 | 7_1:+7057906 | Msa1007510:CDS |
| AACTCGTTCGTTCCCATGGG+TGG | 0.547111 | 7_1:+7057909 | Msa1007510:CDS |
| TGACCAATGTCACCTAACTA+AGG | 0.547251 | 7_1:-7059742 | None:intergenic |
| AGCCCGTCGATTAGCAAAAG+AGG | 0.550604 | 7_1:+7058485 | Msa1007510:CDS |
| AGCCCGTCGATTAGCAGAAG+AGG | 0.554670 | 7_1:+7058431 | Msa1007510:CDS |
| TCTTATTCTAAATTCACTCT+GGG | 0.558794 | 7_1:+7058563 | Msa1007510:CDS |
| AACTCAGGAAAGAAAACCTA+AGG | 0.558917 | 7_1:+7057757 | Msa1007510:CDS |
| CTGTGTTTGTAATGTTTGCA+AGG | 0.567137 | 7_1:-7058650 | None:intergenic |
| TGACCTTAGTTAGGTGACAT+TGG | 0.572381 | 7_1:+7059739 | Msa1007510:three_prime_UTR |
| TATGTTAGCAGTGCATACCT+TGG | 0.581983 | 7_1:+7059690 | Msa1007510:three_prime_UTR |
| ATAGTACACTTGCAACAACT+AGG | 0.582344 | 7_1:-7059556 | None:intergenic |
| TCGTGTGTGGGCAGTAAAGA+CGG | 0.585395 | 7_1:-7058605 | None:intergenic |
| GAGCCTCTTCTGCTAATCGA+CGG | 0.589148 | 7_1:-7058434 | None:intergenic |
| GACACAAAATAATAAACCTA+AGG | 0.592394 | 7_1:-7059527 | None:intergenic |
| GACTTGTTGAGCTCATCCAA+CGG | 0.593483 | 7_1:-7059423 | None:intergenic |
| GATATTTATAACTAATAGTG+TGG | 0.598867 | 7_1:+7059616 | Msa1007510:three_prime_UTR |
| TAACTTCTCCAAGTATGCAT+AGG | 0.601705 | 7_1:-7059669 | None:intergenic |
| TCGAAGGAATTTCCGAAGAG+AGG | 0.602003 | 7_1:+7057790 | Msa1007510:CDS |
| AAAGCTGCTGTTCAGGAGGG+GGG | 0.608878 | 7_1:+7059471 | Msa1007510:CDS |
| GTGTTTCTCTAGTCGTGTGT+GGG | 0.609787 | 7_1:-7058617 | None:intergenic |
| AGTGTTTCTCTAGTCGTGTG+TGG | 0.609826 | 7_1:-7058618 | None:intergenic |
| GGATAAAGCTGCTGTTCAGG+AGG | 0.611925 | 7_1:+7059467 | Msa1007510:CDS |
| GAACAGCAGCTTTATCCTCA+AGG | 0.621167 | 7_1:-7059461 | None:intergenic |
| AACACAAAACGTTAGCCTTG+AGG | 0.622562 | 7_1:+7059446 | Msa1007510:CDS |
| TTGAATAAATAGCTTGACCA+AGG | 0.629472 | 7_1:-7059707 | None:intergenic |
| CATGCCAACACAATATGGCA+AGG | 0.666641 | 7_1:+7058990 | Msa1007510:CDS |
| GCCAACACAATATGGCAAGG+TGG | 0.729546 | 7_1:+7058993 | Msa1007510:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATGATATGAATTGTTAATT+TGG | + | chr7_1:7058255-7058274 | Msa1007510:intron | 15.0% |
| !! | TTATAAGAAATTAAGCAAAA+GGG | + | chr7_1:7059320-7059339 | Msa1007510:intron | 15.0% |
| !!! | ATTTTTAATTATGTATTTGC+AGG | + | chr7_1:7059353-7059372 | Msa1007510:intron | 15.0% |
| !! | TATGATATGAATTGTTAATT+TGG | + | chr7_1:7058255-7058274 | Msa1007510:intron | 15.0% |
| !! | TTATAAGAAATTAAGCAAAA+GGG | + | chr7_1:7059320-7059339 | Msa1007510:intron | 15.0% |
| !!! | ATTTTTAATTATGTATTTGC+AGG | + | chr7_1:7059353-7059372 | Msa1007510:intron | 15.0% |
| !! | CTAGTAAATGTTATGAAAAT+TGG | - | chr7_1:7058037-7058056 | None:intergenic | 20.0% |
| !!! | TTTTAACTAACTTGTTATGT+TGG | + | chr7_1:7058155-7058174 | Msa1007510:intron | 20.0% |
| !! | ATAAAATGATACTACTAATC+TGG | + | chr7_1:7058201-7058220 | Msa1007510:intron | 20.0% |
| !!! | ATGAATTGTTAATTTGGTTA+TGG | + | chr7_1:7058261-7058280 | Msa1007510:intron | 20.0% |
| !!! | ATAAAATTAAGTCTTGTAGA+AGG | - | chr7_1:7059023-7059042 | None:intergenic | 20.0% |
| !!! | CATAGCTTTTCTTTAAAATT+GGG | + | chr7_1:7059220-7059239 | Msa1007510:intron | 20.0% |
| !! | AATTTCTTATAAGTAAGGAA+AGG | - | chr7_1:7059312-7059331 | None:intergenic | 20.0% |
| !! | TGCTTAATTTCTTATAAGTA+AGG | - | chr7_1:7059317-7059336 | None:intergenic | 20.0% |
| !! | CTTATAAGAAATTAAGCAAA+AGG | + | chr7_1:7059319-7059338 | Msa1007510:intron | 20.0% |
| !! | GATATTTATAACTAATAGTG+TGG | + | chr7_1:7059616-7059635 | Msa1007510:three_prime_UTR | 20.0% |
| !! | CTAGTAAATGTTATGAAAAT+TGG | - | chr7_1:7058037-7058056 | None:intergenic | 20.0% |
| !!! | TTTTAACTAACTTGTTATGT+TGG | + | chr7_1:7058155-7058174 | Msa1007510:intron | 20.0% |
| !! | ATAAAATGATACTACTAATC+TGG | + | chr7_1:7058201-7058220 | Msa1007510:intron | 20.0% |
| !!! | ATGAATTGTTAATTTGGTTA+TGG | + | chr7_1:7058261-7058280 | Msa1007510:intron | 20.0% |
| !!! | ATAAAATTAAGTCTTGTAGA+AGG | - | chr7_1:7059023-7059042 | None:intergenic | 20.0% |
| !!! | CATAGCTTTTCTTTAAAATT+GGG | + | chr7_1:7059220-7059239 | Msa1007510:intron | 20.0% |
| !! | AATTTCTTATAAGTAAGGAA+AGG | - | chr7_1:7059312-7059331 | None:intergenic | 20.0% |
| !! | TGCTTAATTTCTTATAAGTA+AGG | - | chr7_1:7059317-7059336 | None:intergenic | 20.0% |
| !! | CTTATAAGAAATTAAGCAAA+AGG | + | chr7_1:7059319-7059338 | Msa1007510:intron | 20.0% |
| !! | GATATTTATAACTAATAGTG+TGG | + | chr7_1:7059616-7059635 | Msa1007510:three_prime_UTR | 20.0% |
| ! | ATATATTTGCTTGAGAAACA+AGG | + | chr7_1:7057646-7057665 | Msa1007510:intron | 25.0% |
| ! | TATATTTGCTTGAGAAACAA+GGG | + | chr7_1:7057647-7057666 | Msa1007510:intron | 25.0% |
| !! | AATATAGATAAGCCTTTTTC+AGG | + | chr7_1:7057718-7057737 | Msa1007510:intron | 25.0% |
| ! | TTGAATTGAAAACCTGAAAA+AGG | - | chr7_1:7057733-7057752 | None:intergenic | 25.0% |
| !! | AGAAGAAAAAAGAGGATTTT+AGG | + | chr7_1:7057813-7057832 | Msa1007510:CDS | 25.0% |
| !! | GAAGAAAAAAGAGGATTTTA+GGG | + | chr7_1:7057814-7057833 | Msa1007510:CDS | 25.0% |
| !! | TGTTTCAATTTCCAATTTTC+AGG | + | chr7_1:7057873-7057892 | Msa1007510:intron | 25.0% |
| ! | TGAATTGAAAACCTGAAAAT+TGG | - | chr7_1:7057887-7057906 | None:intergenic | 25.0% |
| !!! | ACTTGGATTTCTTTTTTGTT+CGG | - | chr7_1:7057947-7057966 | None:intergenic | 25.0% |
| ! | ATAAATAGATAGATAGAGAG+AGG | - | chr7_1:7057995-7058014 | None:intergenic | 25.0% |
| ! | TTATGATCAGATTTATCATC+AGG | + | chr7_1:7058123-7058142 | Msa1007510:CDS | 25.0% |
| ! | TCCATTGTATTTGTATTTGT+AGG | + | chr7_1:7058365-7058384 | Msa1007510:intron | 25.0% |
| ! | ACCTACAAATACAAATACAA+TGG | - | chr7_1:7058369-7058388 | None:intergenic | 25.0% |
| ! | TAAAAAAAAAGCAGAAGAAG+AGG | + | chr7_1:7058461-7058480 | Msa1007510:CDS | 25.0% |
| ! | TCTTATTCTAAATTCACTCT+GGG | + | chr7_1:7058563-7058582 | Msa1007510:CDS | 25.0% |
| !!! | GCAATTTTTAAGAAAACCTA+CGG | - | chr7_1:7058676-7058695 | None:intergenic | 25.0% |
| !! | GTTTTCTTAAAAATTGCTCT+AGG | + | chr7_1:7058679-7058698 | Msa1007510:intron | 25.0% |
| !!! | GGAATTTTTAAGAAAACCTA+CGG | - | chr7_1:7058840-7058859 | None:intergenic | 25.0% |
| !! | GTTTTCTTAAAAATTCCTCT+AGG | + | chr7_1:7058843-7058862 | Msa1007510:intron | 25.0% |
| !!! | CCAATTTTAAAGAAAAGCTA+TGG | - | chr7_1:7059222-7059241 | None:intergenic | 25.0% |
| !!! | CCATAGCTTTTCTTTAAAAT+TGG | + | chr7_1:7059219-7059238 | Msa1007510:intron | 25.0% |
| ! | GACACAAAATAATAAACCTA+AGG | - | chr7_1:7059530-7059549 | None:intergenic | 25.0% |
| ! | AGTTATAAATATCGTTTCTC+TGG | - | chr7_1:7059609-7059628 | None:intergenic | 25.0% |
| ! | ATATATTTGCTTGAGAAACA+AGG | + | chr7_1:7057646-7057665 | Msa1007510:intron | 25.0% |
| ! | TATATTTGCTTGAGAAACAA+GGG | + | chr7_1:7057647-7057666 | Msa1007510:intron | 25.0% |
| !! | AATATAGATAAGCCTTTTTC+AGG | + | chr7_1:7057718-7057737 | Msa1007510:intron | 25.0% |
| ! | TTGAATTGAAAACCTGAAAA+AGG | - | chr7_1:7057733-7057752 | None:intergenic | 25.0% |
| !! | AGAAGAAAAAAGAGGATTTT+AGG | + | chr7_1:7057813-7057832 | Msa1007510:CDS | 25.0% |
| !! | GAAGAAAAAAGAGGATTTTA+GGG | + | chr7_1:7057814-7057833 | Msa1007510:CDS | 25.0% |
| !! | TGTTTCAATTTCCAATTTTC+AGG | + | chr7_1:7057873-7057892 | Msa1007510:intron | 25.0% |
| ! | TGAATTGAAAACCTGAAAAT+TGG | - | chr7_1:7057887-7057906 | None:intergenic | 25.0% |
| !!! | ACTTGGATTTCTTTTTTGTT+CGG | - | chr7_1:7057947-7057966 | None:intergenic | 25.0% |
| ! | ATAAATAGATAGATAGAGAG+AGG | - | chr7_1:7057995-7058014 | None:intergenic | 25.0% |
| ! | TTATGATCAGATTTATCATC+AGG | + | chr7_1:7058123-7058142 | Msa1007510:CDS | 25.0% |
| ! | TCCATTGTATTTGTATTTGT+AGG | + | chr7_1:7058365-7058384 | Msa1007510:intron | 25.0% |
| ! | ACCTACAAATACAAATACAA+TGG | - | chr7_1:7058369-7058388 | None:intergenic | 25.0% |
| ! | TAAAAAAAAAGCAGAAGAAG+AGG | + | chr7_1:7058461-7058480 | Msa1007510:CDS | 25.0% |
| ! | TCTTATTCTAAATTCACTCT+GGG | + | chr7_1:7058563-7058582 | Msa1007510:CDS | 25.0% |
| !!! | GCAATTTTTAAGAAAACCTA+CGG | - | chr7_1:7058676-7058695 | None:intergenic | 25.0% |
| !! | GTTTTCTTAAAAATTGCTCT+AGG | + | chr7_1:7058679-7058698 | Msa1007510:intron | 25.0% |
| !!! | GGAATTTTTAAGAAAACCTA+CGG | - | chr7_1:7058840-7058859 | None:intergenic | 25.0% |
| !! | GTTTTCTTAAAAATTCCTCT+AGG | + | chr7_1:7058843-7058862 | Msa1007510:intron | 25.0% |
| !!! | CCAATTTTAAAGAAAAGCTA+TGG | - | chr7_1:7059222-7059241 | None:intergenic | 25.0% |
| !!! | CCATAGCTTTTCTTTAAAAT+TGG | + | chr7_1:7059219-7059238 | Msa1007510:intron | 25.0% |
| ! | GACACAAAATAATAAACCTA+AGG | - | chr7_1:7059530-7059549 | None:intergenic | 25.0% |
| ! | AGTTATAAATATCGTTTCTC+TGG | - | chr7_1:7059609-7059628 | None:intergenic | 25.0% |
| TAATTTACTCTCACAACAAG+CGG | + | chr7_1:7057577-7057596 | Msa1007510:intron | 30.0% | |
| TTTCAATTCAACAACAACTC+AGG | + | chr7_1:7057742-7057761 | Msa1007510:CDS | 30.0% | |
| GAAAGAGAATGATTAGGAAA+TGG | - | chr7_1:7057848-7057867 | None:intergenic | 30.0% | |
| AAGAACGAAAGAGAATGATT+AGG | - | chr7_1:7057854-7057873 | None:intergenic | 30.0% | |
| AATGATACTACTAATCTGGA+TGG | + | chr7_1:7058205-7058224 | Msa1007510:intron | 30.0% | |
| ! | TAACATGATGATGATGATCT+TGG | + | chr7_1:7058297-7058316 | Msa1007510:intron | 30.0% |
| TCTTGCTCAAAAAAAACTAC+AGG | + | chr7_1:7058509-7058528 | Msa1007510:CDS | 30.0% | |
| CTCTTATTCTAAATTCACTC+TGG | + | chr7_1:7058562-7058581 | Msa1007510:CDS | 30.0% | |
| GAATAGAAGTGGTATACTTA+TGG | - | chr7_1:7059143-7059162 | None:intergenic | 30.0% | |
| AGATGAAAAGTGAATAGAAG+TGG | - | chr7_1:7059154-7059173 | None:intergenic | 30.0% | |
| TTGAATAAATAGCTTGACCA+AGG | - | chr7_1:7059710-7059729 | None:intergenic | 30.0% | |
| TAATTTACTCTCACAACAAG+CGG | + | chr7_1:7057577-7057596 | Msa1007510:intron | 30.0% | |
| TTTCAATTCAACAACAACTC+AGG | + | chr7_1:7057742-7057761 | Msa1007510:CDS | 30.0% | |
| GAAAGAGAATGATTAGGAAA+TGG | - | chr7_1:7057848-7057867 | None:intergenic | 30.0% | |
| AAGAACGAAAGAGAATGATT+AGG | - | chr7_1:7057854-7057873 | None:intergenic | 30.0% | |
| AATGATACTACTAATCTGGA+TGG | + | chr7_1:7058205-7058224 | Msa1007510:intron | 30.0% | |
| ! | TAACATGATGATGATGATCT+TGG | + | chr7_1:7058297-7058316 | Msa1007510:intron | 30.0% |
| TCTTGCTCAAAAAAAACTAC+AGG | + | chr7_1:7058509-7058528 | Msa1007510:CDS | 30.0% | |
| CTCTTATTCTAAATTCACTC+TGG | + | chr7_1:7058562-7058581 | Msa1007510:CDS | 30.0% | |
| GAATAGAAGTGGTATACTTA+TGG | - | chr7_1:7059143-7059162 | None:intergenic | 30.0% | |
| AGATGAAAAGTGAATAGAAG+TGG | - | chr7_1:7059154-7059173 | None:intergenic | 30.0% | |
| TTGAATAAATAGCTTGACCA+AGG | - | chr7_1:7059710-7059729 | None:intergenic | 30.0% | |
| AACTCAGGAAAGAAAACCTA+AGG | + | chr7_1:7057757-7057776 | Msa1007510:CDS | 35.0% | |
| !!! | CTTTTTTCTTCTCCTCTCTT+CGG | - | chr7_1:7057805-7057824 | None:intergenic | 35.0% |
| AAGAGAGGAGAAGAAAAAAG+AGG | + | chr7_1:7057805-7057824 | Msa1007510:CDS | 35.0% | |
| CAGTTTCTTCTTCTTAGACT+TGG | - | chr7_1:7057964-7057983 | None:intergenic | 35.0% | |
| !!! | CTCTTCTTCTGCTACTTTTT+TGG | - | chr7_1:7058409-7058428 | None:intergenic | 35.0% |
| CAAAAAAGTAGCAGAAGAAG+AGG | + | chr7_1:7058407-7058426 | Msa1007510:CDS | 35.0% | |
| CTGTGTTTGTAATGTTTGCA+AGG | - | chr7_1:7058653-7058672 | None:intergenic | 35.0% | |
| !! | CGTTGTTTCTTAGTAAGGAA+AGG | - | chr7_1:7058715-7058734 | None:intergenic | 35.0% |
| !! | AAGCACGTTGTTTCTTAGTA+AGG | - | chr7_1:7058720-7058739 | None:intergenic | 35.0% |
| ! | TTTTGTAATCTGTATGCAGC+TGG | + | chr7_1:7058763-7058782 | Msa1007510:intron | 35.0% |
| ! | GAAAAAGCGTATCATCTTCA+TGG | - | chr7_1:7058790-7058809 | None:intergenic | 35.0% |
| !! | CGTTGTTTCTTAGTAAGGAA+AGG | - | chr7_1:7058715-7058734 | None:intergenic | 35.0% |
| !! | AAGCACGTTGTTTCTTAGTA+AGG | - | chr7_1:7058720-7058739 | None:intergenic | 35.0% |
| ! | TTTTGTAATCTGTATGCAGC+TGG | + | chr7_1:7058763-7058782 | Msa1007510:intron | 35.0% |
| ! | ATGGATTGACATGAATGTTC+AGG | - | chr7_1:7059124-7059143 | None:intergenic | 35.0% |
| CTTCTTGCTAATACACCAAA+TGG | + | chr7_1:7059246-7059265 | Msa1007510:intron | 35.0% | |
| TGAAAATGATATGAAGCCCT+TGG | + | chr7_1:7059383-7059402 | Msa1007510:CDS | 35.0% | |
| ! | GTCCAATATCTAGAGTAGTT+GGG | - | chr7_1:7059508-7059527 | None:intergenic | 35.0% |
| TACTCTAGATATTGGACCTT+AGG | + | chr7_1:7059511-7059530 | Msa1007510:exon | 35.0% | |
| ATAGTACACTTGCAACAACT+AGG | - | chr7_1:7059559-7059578 | None:intergenic | 35.0% | |
| GTTGCAAGTGTACTATGAAA+TGG | + | chr7_1:7059563-7059582 | Msa1007510:three_prime_UTR | 35.0% | |
| GTGTACTATGAAATGGCTTT+AGG | + | chr7_1:7059570-7059589 | Msa1007510:three_prime_UTR | 35.0% | |
| AAGTATGCATAGGAAGTAGA+AGG | - | chr7_1:7059662-7059681 | None:intergenic | 35.0% | |
| TTCTACTTCCTATGCATACT+TGG | + | chr7_1:7059661-7059680 | Msa1007510:three_prime_UTR | 35.0% | |
| TAACTTCTCCAAGTATGCAT+AGG | - | chr7_1:7059672-7059691 | None:intergenic | 35.0% | |
| AACTCAGGAAAGAAAACCTA+AGG | + | chr7_1:7057757-7057776 | Msa1007510:CDS | 35.0% | |
| !!! | CTTTTTTCTTCTCCTCTCTT+CGG | - | chr7_1:7057805-7057824 | None:intergenic | 35.0% |
| AAGAGAGGAGAAGAAAAAAG+AGG | + | chr7_1:7057805-7057824 | Msa1007510:CDS | 35.0% | |
| CAGTTTCTTCTTCTTAGACT+TGG | - | chr7_1:7057964-7057983 | None:intergenic | 35.0% | |
| !!! | CTCTTCTTCTGCTACTTTTT+TGG | - | chr7_1:7058409-7058428 | None:intergenic | 35.0% |
| CAAAAAAGTAGCAGAAGAAG+AGG | + | chr7_1:7058407-7058426 | Msa1007510:CDS | 35.0% | |
| CTGTGTTTGTAATGTTTGCA+AGG | - | chr7_1:7058653-7058672 | None:intergenic | 35.0% | |
| !! | CGTTGTTTCTTAGTAAGGAA+AGG | - | chr7_1:7058715-7058734 | None:intergenic | 35.0% |
| !! | AAGCACGTTGTTTCTTAGTA+AGG | - | chr7_1:7058720-7058739 | None:intergenic | 35.0% |
| ! | TTTTGTAATCTGTATGCAGC+TGG | + | chr7_1:7058763-7058782 | Msa1007510:intron | 35.0% |
| ! | GAAAAAGCGTATCATCTTCA+TGG | - | chr7_1:7058790-7058809 | None:intergenic | 35.0% |
| !! | CGTTGTTTCTTAGTAAGGAA+AGG | - | chr7_1:7058715-7058734 | None:intergenic | 35.0% |
| !! | AAGCACGTTGTTTCTTAGTA+AGG | - | chr7_1:7058720-7058739 | None:intergenic | 35.0% |
| ! | TTTTGTAATCTGTATGCAGC+TGG | + | chr7_1:7058763-7058782 | Msa1007510:intron | 35.0% |
| ! | ATGGATTGACATGAATGTTC+AGG | - | chr7_1:7059124-7059143 | None:intergenic | 35.0% |
| CTTCTTGCTAATACACCAAA+TGG | + | chr7_1:7059246-7059265 | Msa1007510:intron | 35.0% | |
| TGAAAATGATATGAAGCCCT+TGG | + | chr7_1:7059383-7059402 | Msa1007510:CDS | 35.0% | |
| ! | GTCCAATATCTAGAGTAGTT+GGG | - | chr7_1:7059508-7059527 | None:intergenic | 35.0% |
| TACTCTAGATATTGGACCTT+AGG | + | chr7_1:7059511-7059530 | Msa1007510:exon | 35.0% | |
| ATAGTACACTTGCAACAACT+AGG | - | chr7_1:7059559-7059578 | None:intergenic | 35.0% | |
| GTTGCAAGTGTACTATGAAA+TGG | + | chr7_1:7059563-7059582 | Msa1007510:three_prime_UTR | 35.0% | |
| GTGTACTATGAAATGGCTTT+AGG | + | chr7_1:7059570-7059589 | Msa1007510:three_prime_UTR | 35.0% | |
| AAGTATGCATAGGAAGTAGA+AGG | - | chr7_1:7059662-7059681 | None:intergenic | 35.0% | |
| TTCTACTTCCTATGCATACT+TGG | + | chr7_1:7059661-7059680 | Msa1007510:three_prime_UTR | 35.0% | |
| TAACTTCTCCAAGTATGCAT+AGG | - | chr7_1:7059672-7059691 | None:intergenic | 35.0% | |
| CTTCGGAAATTCCTTCGATT+CGG | - | chr7_1:7057788-7057807 | None:intergenic | 40.0% | |
| ! | ATGATCTTGGCTCTCTGTAT+AGG | + | chr7_1:7058310-7058329 | Msa1007510:intron | 40.0% |
| AACATTACAAACACAGCCGT+AGG | + | chr7_1:7058657-7058676 | Msa1007510:intron | 40.0% | |
| AAAGGACAAGACAATCCTAG+AGG | - | chr7_1:7058697-7058716 | None:intergenic | 40.0% | |
| GTGAAGCTGTATCATCTTCA+TGG | - | chr7_1:7058954-7058973 | None:intergenic | 40.0% | |
| AACAGGAGATAGGTTTATGC+AGG | - | chr7_1:7059056-7059075 | None:intergenic | 40.0% | |
| CAGTTTCATGAACAGGAGAT+AGG | - | chr7_1:7059066-7059085 | None:intergenic | 40.0% | |
| AATATCCAGACACACACACT+AGG | - | chr7_1:7059089-7059108 | None:intergenic | 40.0% | |
| GATAAGAAGACAGTCCTAGA+GGG | - | chr7_1:7059290-7059309 | None:intergenic | 40.0% | |
| !! | AACACAAAACGTTAGCCTTG+AGG | + | chr7_1:7059446-7059465 | Msa1007510:CDS | 40.0% |
| ! | GGTCCAATATCTAGAGTAGT+TGG | - | chr7_1:7059509-7059528 | None:intergenic | 40.0% |
| TATGTTAGCAGTGCATACCT+TGG | + | chr7_1:7059690-7059709 | Msa1007510:three_prime_UTR | 40.0% | |
| CTGCATAACTGACCTTAGTT+AGG | + | chr7_1:7059730-7059749 | Msa1007510:three_prime_UTR | 40.0% | |
| TGACCTTAGTTAGGTGACAT+TGG | + | chr7_1:7059739-7059758 | Msa1007510:three_prime_UTR | 40.0% | |
| TGACCAATGTCACCTAACTA+AGG | - | chr7_1:7059745-7059764 | None:intergenic | 40.0% | |
| CTTCGGAAATTCCTTCGATT+CGG | - | chr7_1:7057788-7057807 | None:intergenic | 40.0% | |
| ! | ATGATCTTGGCTCTCTGTAT+AGG | + | chr7_1:7058310-7058329 | Msa1007510:intron | 40.0% |
| AACATTACAAACACAGCCGT+AGG | + | chr7_1:7058657-7058676 | Msa1007510:intron | 40.0% | |
| AAAGGACAAGACAATCCTAG+AGG | - | chr7_1:7058697-7058716 | None:intergenic | 40.0% | |
| GTGAAGCTGTATCATCTTCA+TGG | - | chr7_1:7058954-7058973 | None:intergenic | 40.0% | |
| AACAGGAGATAGGTTTATGC+AGG | - | chr7_1:7059056-7059075 | None:intergenic | 40.0% | |
| CAGTTTCATGAACAGGAGAT+AGG | - | chr7_1:7059066-7059085 | None:intergenic | 40.0% | |
| AATATCCAGACACACACACT+AGG | - | chr7_1:7059089-7059108 | None:intergenic | 40.0% | |
| GATAAGAAGACAGTCCTAGA+GGG | - | chr7_1:7059290-7059309 | None:intergenic | 40.0% | |
| !! | AACACAAAACGTTAGCCTTG+AGG | + | chr7_1:7059446-7059465 | Msa1007510:CDS | 40.0% |
| ! | GGTCCAATATCTAGAGTAGT+TGG | - | chr7_1:7059509-7059528 | None:intergenic | 40.0% |
| TATGTTAGCAGTGCATACCT+TGG | + | chr7_1:7059690-7059709 | Msa1007510:three_prime_UTR | 40.0% | |
| CTGCATAACTGACCTTAGTT+AGG | + | chr7_1:7059730-7059749 | Msa1007510:three_prime_UTR | 40.0% | |
| TGACCTTAGTTAGGTGACAT+TGG | + | chr7_1:7059739-7059758 | Msa1007510:three_prime_UTR | 40.0% | |
| TGACCAATGTCACCTAACTA+AGG | - | chr7_1:7059745-7059764 | None:intergenic | 40.0% | |
| AATCGCCAGATGAGCGTATT+TGG | - | chr7_1:7057697-7057716 | None:intergenic | 45.0% | |
| TCGAAGGAATTTCCGAAGAG+AGG | + | chr7_1:7057790-7057809 | Msa1007510:CDS | 45.0% | |
| AACAACTCGTTCGTTCCCAT+GGG | + | chr7_1:7057906-7057925 | Msa1007510:CDS | 45.0% | |
| ! | AGCCTCTTTTGCTAATCGAC+GGG | - | chr7_1:7058490-7058509 | None:intergenic | 45.0% |
| ! | GAGCCTCTTTTGCTAATCGA+CGG | - | chr7_1:7058491-7058510 | None:intergenic | 45.0% |
| GTGTTTCTCTAGTCGTGTGT+GGG | - | chr7_1:7058620-7058639 | None:intergenic | 45.0% | |
| AGTGTTTCTCTAGTCGTGTG+TGG | - | chr7_1:7058621-7058640 | None:intergenic | 45.0% | |
| AAAGCTACAAACACAGCCGT+AGG | + | chr7_1:7058821-7058840 | Msa1007510:intron | 45.0% | |
| ! | TATTGTGTTGGCATGTGCAC+AGG | - | chr7_1:7058985-7059004 | None:intergenic | 45.0% |
| GTGCACATGCCAACACAATA+TGG | + | chr7_1:7058985-7059004 | Msa1007510:CDS | 45.0% | |
| CATGCCAACACAATATGGCA+AGG | + | chr7_1:7058990-7059009 | Msa1007510:CDS | 45.0% | |
| ACCACCTTGCCATATTGTGT+TGG | - | chr7_1:7058997-7059016 | None:intergenic | 45.0% | |
| CACTAGGCAGTTTCATGAAC+AGG | - | chr7_1:7059073-7059092 | None:intergenic | 45.0% | |
| GGATAAGAAGACAGTCCTAG+AGG | - | chr7_1:7059291-7059310 | None:intergenic | 45.0% | |
| !! | GACTTGTTGAGCTCATCCAA+CGG | - | chr7_1:7059426-7059445 | None:intergenic | 45.0% |
| ! | GAACAGCAGCTTTATCCTCA+AGG | - | chr7_1:7059464-7059483 | None:intergenic | 45.0% |
| TGAGGATAAAGCTGCTGTTC+AGG | + | chr7_1:7059464-7059483 | Msa1007510:CDS | 45.0% | |
| GATAAAGCTGCTGTTCAGGA+GGG | + | chr7_1:7059468-7059487 | Msa1007510:CDS | 45.0% | |
| ATAAAGCTGCTGTTCAGGAG+GGG | + | chr7_1:7059469-7059488 | Msa1007510:CDS | 45.0% | |
| CGCCCAACTACTCTAGATAT+TGG | + | chr7_1:7059503-7059522 | Msa1007510:exon | 45.0% | |
| AATCGCCAGATGAGCGTATT+TGG | - | chr7_1:7057697-7057716 | None:intergenic | 45.0% | |
| TCGAAGGAATTTCCGAAGAG+AGG | + | chr7_1:7057790-7057809 | Msa1007510:CDS | 45.0% | |
| AACAACTCGTTCGTTCCCAT+GGG | + | chr7_1:7057906-7057925 | Msa1007510:CDS | 45.0% | |
| ! | AGCCTCTTTTGCTAATCGAC+GGG | - | chr7_1:7058490-7058509 | None:intergenic | 45.0% |
| ! | GAGCCTCTTTTGCTAATCGA+CGG | - | chr7_1:7058491-7058510 | None:intergenic | 45.0% |
| GTGTTTCTCTAGTCGTGTGT+GGG | - | chr7_1:7058620-7058639 | None:intergenic | 45.0% | |
| AGTGTTTCTCTAGTCGTGTG+TGG | - | chr7_1:7058621-7058640 | None:intergenic | 45.0% | |
| AAAGCTACAAACACAGCCGT+AGG | + | chr7_1:7058821-7058840 | Msa1007510:intron | 45.0% | |
| ! | TATTGTGTTGGCATGTGCAC+AGG | - | chr7_1:7058985-7059004 | None:intergenic | 45.0% |
| GTGCACATGCCAACACAATA+TGG | + | chr7_1:7058985-7059004 | Msa1007510:CDS | 45.0% | |
| CATGCCAACACAATATGGCA+AGG | + | chr7_1:7058990-7059009 | Msa1007510:CDS | 45.0% | |
| ACCACCTTGCCATATTGTGT+TGG | - | chr7_1:7058997-7059016 | None:intergenic | 45.0% | |
| CACTAGGCAGTTTCATGAAC+AGG | - | chr7_1:7059073-7059092 | None:intergenic | 45.0% | |
| GGATAAGAAGACAGTCCTAG+AGG | - | chr7_1:7059291-7059310 | None:intergenic | 45.0% | |
| !! | GACTTGTTGAGCTCATCCAA+CGG | - | chr7_1:7059426-7059445 | None:intergenic | 45.0% |
| ! | GAACAGCAGCTTTATCCTCA+AGG | - | chr7_1:7059464-7059483 | None:intergenic | 45.0% |
| TGAGGATAAAGCTGCTGTTC+AGG | + | chr7_1:7059464-7059483 | Msa1007510:CDS | 45.0% | |
| GATAAAGCTGCTGTTCAGGA+GGG | + | chr7_1:7059468-7059487 | Msa1007510:CDS | 45.0% | |
| ATAAAGCTGCTGTTCAGGAG+GGG | + | chr7_1:7059469-7059488 | Msa1007510:CDS | 45.0% | |
| CGCCCAACTACTCTAGATAT+TGG | + | chr7_1:7059503-7059522 | Msa1007510:exon | 45.0% | |
| !! | TACAAAATAAAAATAAAAAA+TGG | - | chr7_1:7058080-7058099 | None:intergenic | 5.0% |
| !! | TACAAAATAAAAATAAAAAA+TGG | - | chr7_1:7058080-7058099 | None:intergenic | 5.0% |
| GCCAGATGAGCGTATTTGGA+CGG | - | chr7_1:7057693-7057712 | None:intergenic | 50.0% | |
| !! | CGGAAATTCCTTCGATTCGG+CGG | - | chr7_1:7057785-7057804 | None:intergenic | 50.0% |
| CAACAACTCGTTCGTTCCCA+TGG | + | chr7_1:7057905-7057924 | Msa1007510:CDS | 50.0% | |
| AGCCTCTTCTGCTAATCGAC+GGG | - | chr7_1:7058436-7058455 | None:intergenic | 50.0% | |
| GAGCCTCTTCTGCTAATCGA+CGG | - | chr7_1:7058437-7058456 | None:intergenic | 50.0% | |
| ! | AGCCCGTCGATTAGCAAAAG+AGG | + | chr7_1:7058485-7058504 | Msa1007510:CDS | 50.0% |
| ! | TGCTGCCTCTTTTGCTTTGC+GGG | - | chr7_1:7058535-7058554 | None:intergenic | 50.0% |
| ! | CTGCTGCCTCTTTTGCTTTG+CGG | - | chr7_1:7058536-7058555 | None:intergenic | 50.0% |
| TCGTGTGTGGGCAGTAAAGA+CGG | - | chr7_1:7058608-7058627 | None:intergenic | 50.0% | |
| ! | GGCATGTGCACAGGTTGAAT+TGG | - | chr7_1:7058976-7058995 | None:intergenic | 50.0% |
| GCCAACACAATATGGCAAGG+TGG | + | chr7_1:7058993-7059012 | Msa1007510:CDS | 50.0% | |
| AACTGCCTAGTGTGTGTGTC+TGG | + | chr7_1:7059081-7059100 | Msa1007510:intron | 50.0% | |
| CACCAAATGGAGAGAGCCTT+AGG | + | chr7_1:7059259-7059278 | Msa1007510:intron | 50.0% | |
| TGCCTAAGGCTCTCTCCATT+TGG | - | chr7_1:7059264-7059283 | None:intergenic | 50.0% | |
| GGATAAAGCTGCTGTTCAGG+AGG | + | chr7_1:7059467-7059486 | Msa1007510:CDS | 50.0% | |
| TAAAGCTGCTGTTCAGGAGG+GGG | + | chr7_1:7059470-7059489 | Msa1007510:CDS | 50.0% | |
| GCCAGATGAGCGTATTTGGA+CGG | - | chr7_1:7057693-7057712 | None:intergenic | 50.0% | |
| !! | CGGAAATTCCTTCGATTCGG+CGG | - | chr7_1:7057785-7057804 | None:intergenic | 50.0% |
| CAACAACTCGTTCGTTCCCA+TGG | + | chr7_1:7057905-7057924 | Msa1007510:CDS | 50.0% | |
| AGCCTCTTCTGCTAATCGAC+GGG | - | chr7_1:7058436-7058455 | None:intergenic | 50.0% | |
| GAGCCTCTTCTGCTAATCGA+CGG | - | chr7_1:7058437-7058456 | None:intergenic | 50.0% | |
| ! | AGCCCGTCGATTAGCAAAAG+AGG | + | chr7_1:7058485-7058504 | Msa1007510:CDS | 50.0% |
| ! | TGCTGCCTCTTTTGCTTTGC+GGG | - | chr7_1:7058535-7058554 | None:intergenic | 50.0% |
| ! | CTGCTGCCTCTTTTGCTTTG+CGG | - | chr7_1:7058536-7058555 | None:intergenic | 50.0% |
| TCGTGTGTGGGCAGTAAAGA+CGG | - | chr7_1:7058608-7058627 | None:intergenic | 50.0% | |
| ! | GGCATGTGCACAGGTTGAAT+TGG | - | chr7_1:7058976-7058995 | None:intergenic | 50.0% |
| GCCAACACAATATGGCAAGG+TGG | + | chr7_1:7058993-7059012 | Msa1007510:CDS | 50.0% | |
| AACTGCCTAGTGTGTGTGTC+TGG | + | chr7_1:7059081-7059100 | Msa1007510:intron | 50.0% | |
| CACCAAATGGAGAGAGCCTT+AGG | + | chr7_1:7059259-7059278 | Msa1007510:intron | 50.0% | |
| TGCCTAAGGCTCTCTCCATT+TGG | - | chr7_1:7059264-7059283 | None:intergenic | 50.0% | |
| GGATAAAGCTGCTGTTCAGG+AGG | + | chr7_1:7059467-7059486 | Msa1007510:CDS | 50.0% | |
| TAAAGCTGCTGTTCAGGAGG+GGG | + | chr7_1:7059470-7059489 | Msa1007510:CDS | 50.0% | |
| GCCGTCCAAATACGCTCATC+TGG | + | chr7_1:7057689-7057708 | Msa1007510:intron | 55.0% | |
| !! | CTTCGATTCGGCGGAACCTT+AGG | - | chr7_1:7057776-7057795 | None:intergenic | 55.0% |
| CTAAGGTTCCGCCGAATCGA+AGG | + | chr7_1:7057774-7057793 | Msa1007510:CDS | 55.0% | |
| AACTCGTTCGTTCCCATGGG+TGG | + | chr7_1:7057909-7057928 | Msa1007510:CDS | 55.0% | |
| ! | CTTTTGCTGCCTCCACCCAT+GGG | - | chr7_1:7057924-7057943 | None:intergenic | 55.0% |
| ! | AGCCCGTCGATTAGCAGAAG+AGG | + | chr7_1:7058431-7058450 | Msa1007510:CDS | 55.0% |
| ACAGGCCCGCAAAGCAAAAG+AGG | + | chr7_1:7058527-7058546 | Msa1007510:CDS | 55.0% | |
| AGCCTTAGGCAATGCCCTCT+AGG | + | chr7_1:7059273-7059292 | Msa1007510:intron | 55.0% | |
| !! | GTCCTAGAGGGCATTGCCTA+AGG | - | chr7_1:7059278-7059297 | None:intergenic | 55.0% |
| TGTTGAGCTCATCCAACGGC+TGG | - | chr7_1:7059422-7059441 | None:intergenic | 55.0% | |
| AAAGCTGCTGTTCAGGAGGG+GGG | + | chr7_1:7059471-7059490 | Msa1007510:CDS | 55.0% | |
| GCCGTCCAAATACGCTCATC+TGG | + | chr7_1:7057689-7057708 | Msa1007510:intron | 55.0% | |
| !! | CTTCGATTCGGCGGAACCTT+AGG | - | chr7_1:7057776-7057795 | None:intergenic | 55.0% |
| CTAAGGTTCCGCCGAATCGA+AGG | + | chr7_1:7057774-7057793 | Msa1007510:CDS | 55.0% | |
| AACTCGTTCGTTCCCATGGG+TGG | + | chr7_1:7057909-7057928 | Msa1007510:CDS | 55.0% | |
| ! | CTTTTGCTGCCTCCACCCAT+GGG | - | chr7_1:7057924-7057943 | None:intergenic | 55.0% |
| ! | AGCCCGTCGATTAGCAGAAG+AGG | + | chr7_1:7058431-7058450 | Msa1007510:CDS | 55.0% |
| ACAGGCCCGCAAAGCAAAAG+AGG | + | chr7_1:7058527-7058546 | Msa1007510:CDS | 55.0% | |
| AGCCTTAGGCAATGCCCTCT+AGG | + | chr7_1:7059273-7059292 | Msa1007510:intron | 55.0% | |
| !! | GTCCTAGAGGGCATTGCCTA+AGG | - | chr7_1:7059278-7059297 | None:intergenic | 55.0% |
| TGTTGAGCTCATCCAACGGC+TGG | - | chr7_1:7059422-7059441 | None:intergenic | 55.0% | |
| AAAGCTGCTGTTCAGGAGGG+GGG | + | chr7_1:7059471-7059490 | Msa1007510:CDS | 55.0% | |
| TCGTTCGTTCCCATGGGTGG+AGG | + | chr7_1:7057912-7057931 | Msa1007510:CDS | 60.0% | |
| ! | GCTTTTGCTGCCTCCACCCA+TGG | - | chr7_1:7057925-7057944 | None:intergenic | 60.0% |
| TGGCTGCTGCTGGCATCCAA+GGG | - | chr7_1:7059402-7059421 | None:intergenic | 60.0% | |
| ! | GCTGTTCAGGAGGGGGGTAT+TGG | + | chr7_1:7059477-7059496 | Msa1007510:CDS | 60.0% |
| TCGTTCGTTCCCATGGGTGG+AGG | + | chr7_1:7057912-7057931 | Msa1007510:CDS | 60.0% | |
| ! | GCTTTTGCTGCCTCCACCCA+TGG | - | chr7_1:7057925-7057944 | None:intergenic | 60.0% |
| TGGCTGCTGCTGGCATCCAA+GGG | - | chr7_1:7059402-7059421 | None:intergenic | 60.0% | |
| ! | GCTGTTCAGGAGGGGGGTAT+TGG | + | chr7_1:7059477-7059496 | Msa1007510:CDS | 60.0% |
| CTGGCTGCTGCTGGCATCCA+AGG | - | chr7_1:7059403-7059422 | None:intergenic | 65.0% | |
| ! | ATCCAACGGCTGGCTGCTGC+TGG | - | chr7_1:7059412-7059431 | None:intergenic | 65.0% |
| CTGGCTGCTGCTGGCATCCA+AGG | - | chr7_1:7059403-7059422 | None:intergenic | 65.0% | |
| ! | ATCCAACGGCTGGCTGCTGC+TGG | - | chr7_1:7059412-7059431 | None:intergenic | 65.0% |
| TGCCAGCAGCAGCCAGCCGT+TGG | + | chr7_1:7059407-7059426 | Msa1007510:CDS | 70.0% | |
| TGCCAGCAGCAGCCAGCCGT+TGG | + | chr7_1:7059407-7059426 | Msa1007510:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 7057549 | 7059795 | 7057549 | ID=Msa1007510;Name=Msa1007510 |
| chr7_1 | mRNA | 7057549 | 7059795 | 7057549 | ID=Msa1007510-mRNA-1;Parent=Msa1007510;Name=Msa1007510-mRNA-1;_AED=0.26;_eAED=0.26;_QI=0|0.16|0.28|0.57|0.33|0.57|7|277|239 |
| chr7_1 | exon | 7057549 | 7057557 | 7057549 | ID=Msa1007510-mRNA-1:exon:2121;Parent=Msa1007510-mRNA-1 |
| chr7_1 | exon | 7057740 | 7057835 | 7057740 | ID=Msa1007510-mRNA-1:exon:2122;Parent=Msa1007510-mRNA-1 |
| chr7_1 | exon | 7057895 | 7057964 | 7057895 | ID=Msa1007510-mRNA-1:exon:2123;Parent=Msa1007510-mRNA-1 |
| chr7_1 | exon | 7058101 | 7058144 | 7058101 | ID=Msa1007510-mRNA-1:exon:2124;Parent=Msa1007510-mRNA-1 |
| chr7_1 | exon | 7058387 | 7058674 | 7058387 | ID=Msa1007510-mRNA-1:exon:2125;Parent=Msa1007510-mRNA-1 |
| chr7_1 | exon | 7058946 | 7059014 | 7058946 | ID=Msa1007510-mRNA-1:exon:2126;Parent=Msa1007510-mRNA-1 |
| chr7_1 | exon | 7059375 | 7059795 | 7059375 | ID=Msa1007510-mRNA-1:exon:2127;Parent=Msa1007510-mRNA-1 |
| chr7_1 | CDS | 7057549 | 7057557 | 7057549 | ID=Msa1007510-mRNA-1:cds;Parent=Msa1007510-mRNA-1 |
| chr7_1 | CDS | 7057740 | 7057835 | 7057740 | ID=Msa1007510-mRNA-1:cds;Parent=Msa1007510-mRNA-1 |
| chr7_1 | CDS | 7057895 | 7057964 | 7057895 | ID=Msa1007510-mRNA-1:cds;Parent=Msa1007510-mRNA-1 |
| chr7_1 | CDS | 7058101 | 7058144 | 7058101 | ID=Msa1007510-mRNA-1:cds;Parent=Msa1007510-mRNA-1 |
| chr7_1 | CDS | 7058387 | 7058674 | 7058387 | ID=Msa1007510-mRNA-1:cds;Parent=Msa1007510-mRNA-1 |
| chr7_1 | CDS | 7058946 | 7059014 | 7058946 | ID=Msa1007510-mRNA-1:cds;Parent=Msa1007510-mRNA-1 |
| chr7_1 | CDS | 7059375 | 7059518 | 7059375 | ID=Msa1007510-mRNA-1:cds;Parent=Msa1007510-mRNA-1 |
| chr7_1 | three_prime_UTR | 7059519 | 7059795 | 7059519 | ID=Msa1007510-mRNA-1:three_prime_utr;Parent=Msa1007510-mRNA-1 |
| Gene Sequence |
| Protein sequence |
