Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1406120 | ABD32736.1 | 58.712 | 264 | 31 | 5 | 25 | 234 | 138 | 377 | 1.06e-72 | 246 |
| Msa1406120 | ABD32736.1 | 70.423 | 284 | 20 | 4 | 242 | 499 | 138 | 383 | 5.57e-86 | 280 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1406120 | Q2HT70 | 58.712 | 264 | 31 | 5 | 25 | 234 | 138 | 377 | 5.07e-73 | 246 |
| Msa1406120 | Q2HT70 | 70.423 | 284 | 20 | 4 | 242 | 499 | 138 | 383 | 2.66e-86 | 280 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0119900 | Msa1406120 | 0.805863 | 1.087122e-49 | -8.615850e-47 |
| Msa1406120 | Msa1406150 | 0.942763 | 4.037273e-102 | -8.615850e-47 |
| Msa0800370 | Msa1406120 | 0.800246 | 1.576826e-48 | -8.615850e-47 |
| Msa0234320 | Msa1406120 | 0.803433 | 3.494432e-49 | -8.615850e-47 |
| Msa1240250 | Msa1406120 | 0.834229 | 3.382763e-56 | -8.615850e-47 |
| Msa0394280 | Msa1406120 | 0.804527 | 2.070010e-49 | -8.615850e-47 |
| Msa1007480 | Msa1406120 | 0.863815 | 1.901062e-64 | -8.615850e-47 |
| Msa1007510 | Msa1406120 | 0.827620 | 1.414571e-54 | -8.615850e-47 |
| Msa1099960 | Msa1406120 | 0.939684 | 8.404889e-100 | -8.615850e-47 |
| Msa1136290 | Msa1406120 | 0.930192 | 2.341691e-93 | -8.615850e-47 |
| Msa0917830 | Msa1406120 | 0.830752 | 2.459890e-55 | -8.615850e-47 |
| Msa0974950 | Msa1406120 | 0.812042 | 5.173757e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1406120 | MtrunA17_Chr7g0217851 | 72.947 | 207 | 18 | 2 | 311 | 499 | 5 | 191 | 1.98e-71 | 225 |
| Msa1406120 | MtrunA17_Chr7g0217851 | 63.682 | 201 | 17 | 2 | 70 | 234 | 5 | 185 | 3.50e-68 | 217 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 78 sgRNAs with CRISPR-Local
Find 535 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGGCTGCTGCTGGCATCCA+AGG | 0.270786 | tig0023193:+28680 | None:intergenic |
| CTGGCTGCTGCTGGCATCCA+AGG | 0.270786 | tig0023193:+36781 | None:intergenic |
| CTTCGATTCGGCGGAACCTT+AGG | 0.302401 | tig0023193:+38338 | None:intergenic |
| ATCCAACGGCTGGCTGCTGC+TGG | 0.310560 | tig0023193:+28671 | None:intergenic |
| ATCCAACGGCTGGCTGCTGC+TGG | 0.310560 | tig0023193:+36772 | None:intergenic |
| TCTTCTCTTCTGAAATTCCT+TGG | 0.347608 | tig0023193:+30178 | None:intergenic |
| CTTCTGAAATTCCTTGGATT+CGG | 0.356725 | tig0023193:+30184 | None:intergenic |
| CAGTTTCTTCTTCTTAGACT+TGG | 0.357409 | tig0023193:+30015 | None:intergenic |
| TCTAAATTCACTCTGGTCAT+TGG | 0.364019 | tig0023193:-37663 | Msa1406120:CDS |
| GTGCACATGCCAACACAATA+TGG | 0.384828 | tig0023193:-29094 | Msa1406120:CDS |
| GTGCACATGCCAACACAATA+TGG | 0.384828 | tig0023193:-37247 | Msa1406120:CDS |
| TGAGGATAAAGCTGCTGTTC+AGG | 0.399727 | tig0023193:-36717 | Msa1406120:CDS |
| TGGCTGCTGCTGGCATCCAA+GGG | 0.406161 | tig0023193:+28681 | None:intergenic |
| TGGCTGCTGCTGGCATCCAA+GGG | 0.406161 | tig0023193:+36782 | None:intergenic |
| GTGAAGCTGTATCATCTTCA+TGG | 0.410616 | tig0023193:+29128 | None:intergenic |
| GTGAAGCTGTATCATCTTCA+TGG | 0.410616 | tig0023193:+37281 | None:intergenic |
| GAAAGAGAATGATTAGGAAA+TGG | 0.414214 | tig0023193:+30124 | None:intergenic |
| CTTCGGAAATTCCTTCGATT+CGG | 0.419342 | tig0023193:+38326 | None:intergenic |
| GGTCCAATATCTAGAGTAGT+TGG | 0.437672 | tig0023193:+28574 | None:intergenic |
| TTATGATCAGATTTATCGTC+AGG | 0.438391 | tig0023193:-29879 | Msa1406120:intron |
| TTATGATCAGATTTATCGTC+AGG | 0.438391 | tig0023193:-37988 | Msa1406120:intron |
| ACCTCCTTGCCATATTGTGT+TGG | 0.455217 | tig0023193:+29085 | None:intergenic |
| ACCTCCTTGCCATATTGTGT+TGG | 0.459988 | tig0023193:+37238 | None:intergenic |
| GGCATGTGCACAGGTTGAAT+TGG | 0.460863 | tig0023193:+29106 | None:intergenic |
| GGCATGTGCACAGGTTGAAT+TGG | 0.460863 | tig0023193:+37259 | None:intergenic |
| ATCGAAGAAAGAGAATGATT+AGG | 0.463808 | tig0023193:+30118 | None:intergenic |
| CAACAACTCGTTCGTTCCCA+TGG | 0.466615 | tig0023193:-30071 | Msa1406120:CDS |
| CAACAACTCGTTCGTTCCCA+TGG | 0.466615 | tig0023193:-38206 | Msa1406120:CDS |
| CGAAAATGATATGAAGCCCT+TGG | 0.474824 | tig0023193:-36798 | Msa1406120:CDS |
| ATAAAGCTGCTGTTCAGGAG+GGG | 0.477624 | tig0023193:-36712 | Msa1406120:CDS |
| TGCCAGCAGCAGCCAGCCGT+TGG | 0.479830 | tig0023193:-28673 | Msa1406120:CDS |
| TGCCAGCAGCAGCCAGCCGT+TGG | 0.479830 | tig0023193:-36774 | Msa1406120:CDS |
| GTTGAATTGAAAACCTGAAA+AGG | 0.480074 | tig0023193:+30090 | None:intergenic |
| TATTGTGTTGGCATGTGCAC+AGG | 0.498215 | tig0023193:+29097 | None:intergenic |
| TATTGTGTTGGCATGTGCAC+AGG | 0.498215 | tig0023193:+37250 | None:intergenic |
| GCAGGCCCGCAAAGCAAAAG+AGG | 0.498850 | tig0023193:-29552 | Msa1406120:CDS |
| GCAGGCCCGCAAAGCAAAAG+AGG | 0.498850 | tig0023193:-37705 | Msa1406120:CDS |
| TGAAAATGATATGAAGCCCT+TGG | 0.509252 | tig0023193:-28697 | Msa1406120:CDS |
| CTAAGGTTCCGCCGAATCGA+AGG | 0.510517 | tig0023193:-38337 | Msa1406120:CDS |
| GTCCAATATCTAGAGTAGTT+GGG | 0.512418 | tig0023193:+28575 | None:intergenic |
| TAAAGCTGCTGTTCAGGAGG+GGG | 0.518520 | tig0023193:-36711 | Msa1406120:CDS |
| CTGAAATTCCTTGGATTCGG+CGG | 0.522335 | tig0023193:+30187 | None:intergenic |
| TCGTTCGTTCCCATGGGTGG+AGG | 0.527930 | tig0023193:-30064 | Msa1406120:CDS |
| TCGTTCGTTCCCATGGGTGG+AGG | 0.527930 | tig0023193:-38199 | Msa1406120:CDS |
| CGGAAATTCCTTCGATTCGG+CGG | 0.529088 | tig0023193:+38329 | None:intergenic |
| AGCCTCTTCTGCTAATCGAC+GGG | 0.530366 | tig0023193:+29646 | None:intergenic |
| GATAAAGCTGCTGTTCAGGA+GGG | 0.535418 | tig0023193:-36713 | Msa1406120:CDS |
| TGTTGAGCTCATCCAACGGC+TGG | 0.538954 | tig0023193:+28661 | None:intergenic |
| TGTTGAGCTCATCCAACGGC+TGG | 0.538954 | tig0023193:+36762 | None:intergenic |
| CTAGGGTTCCGCCGAATCCA+AGG | 0.543613 | tig0023193:-30195 | Msa1406120:intron |
| AACAACTCGTTCGTTCCCAT+GGG | 0.544415 | tig0023193:-30070 | Msa1406120:CDS |
| AACAACTCGTTCGTTCCCAT+GGG | 0.544415 | tig0023193:-38205 | Msa1406120:CDS |
| AACTCGTTCGTTCCCATGGG+TGG | 0.547111 | tig0023193:-30067 | Msa1406120:CDS |
| AACTCGTTCGTTCCCATGGG+TGG | 0.547111 | tig0023193:-38202 | Msa1406120:CDS |
| AGCCCGTCGATTAGCAAAAG+AGG | 0.550604 | tig0023193:-29594 | Msa1406120:CDS |
| AGCCTCTTCAGCTAATCGAC+GGG | 0.554287 | tig0023193:+37745 | None:intergenic |
| AGCCCGTCGATTAGCAGAAG+AGG | 0.554670 | tig0023193:-29648 | Msa1406120:CDS |
| AAAGCTGCTGTTCAGGAGGG+GGG | 0.558778 | tig0023193:-36710 | Msa1406120:CDS |
| AACTCAGAAAAGAAAACCTA+AGG | 0.565870 | tig0023193:-38354 | Msa1406120:CDS |
| AAGAGAAGAGAAGAAAAGAG+AGG | 0.577793 | tig0023193:-30164 | Msa1406120:CDS |
| CTCTTGCTCTAAATTCACTC+TGG | 0.587930 | tig0023193:-29517 | Msa1406120:CDS |
| CTCTTGCTCTAAATTCACTC+TGG | 0.587930 | tig0023193:-37670 | Msa1406120:CDS |
| AGCCCGTCGATTAGCTGAAG+AGG | 0.588284 | tig0023193:-37747 | Msa1406120:CDS |
| GAGCCTCTTCTGCTAATCGA+CGG | 0.589148 | tig0023193:+29645 | None:intergenic |
| GAGCCTCTTCAGCTAATCGA+CGG | 0.591168 | tig0023193:+37744 | None:intergenic |
| GACTTGTTGAGCTCATCCAA+CGG | 0.593483 | tig0023193:+28657 | None:intergenic |
| GACTTGTTGAGCTCATCCAA+CGG | 0.593483 | tig0023193:+36758 | None:intergenic |
| TCGAAGGAATTTCCGAAGAG+AGG | 0.602003 | tig0023193:-38321 | Msa1406120:CDS |
| GGATAAAGCTGCTGTTCAGG+AGG | 0.611925 | tig0023193:-36714 | Msa1406120:CDS |
| AAGCTGCTGTTCAGGAGGGG+GGG | 0.617540 | tig0023193:-36709 | Msa1406120:intron |
| GAAAAGCAGCTTTATCCTCA+AGG | 0.621167 | tig0023193:+28619 | None:intergenic |
| GAACAGCAGCTTTATCCTCA+AGG | 0.621167 | tig0023193:+36720 | None:intergenic |
| AACACAAAACGTTAGCCTTG+AGG | 0.622562 | tig0023193:-28634 | Msa1406120:CDS |
| AACACAAAACGTTAGCCTTG+AGG | 0.622562 | tig0023193:-36735 | Msa1406120:CDS |
| CATGCCAACACAATATGGCA+AGG | 0.661413 | tig0023193:-29089 | Msa1406120:CDS |
| CATGCCAACACAATATGGCA+AGG | 0.661413 | tig0023193:-37242 | Msa1406120:CDS |
| GCCAACACAATATGGCAAGG+AGG | 0.737684 | tig0023193:-29086 | Msa1406120:intron |
| GCCAACACAATATGGCAAGG+AGG | 0.737684 | tig0023193:-37239 | Msa1406120:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAAAAAAAAAAAAAAA+AGG | + | tig0023193:36262-36281 | None:intergenic | 0.0% |
| !! | TAAAATTATAAAAATCTAGT+TGG | + | tig0023193:31440-31459 | None:intergenic | 10.0% |
| !! | AACTTATTTATATAATATGT+TGG | + | tig0023193:31792-31811 | None:intergenic | 10.0% |
| !! | TAAAAAAAAAATCCAATTAT+TGG | + | tig0023193:31987-32006 | None:intergenic | 10.0% |
| !! | AAATTTATGATGTAATATAA+AGG | - | tig0023193:34643-34662 | Msa1406120:intron | 10.0% |
| !! | AAACATTTGAATAAAAAAAT+CGG | + | tig0023193:34788-34807 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTGTTTTTTAAC+AGG | + | tig0023193:35895-35914 | None:intergenic | 10.0% |
| !! | TATGATATGAATTGTTAATT+TGG | - | tig0023193:29275-29294 | Msa1406120:CDS | 15.0% |
| !! | TTATAAGAAATTAAGCAAAA+GGG | - | tig0023193:30285-30304 | Msa1406120:intron | 15.0% |
| !!! | ATTTTTAATTATGTATTTGC+AGG | - | tig0023193:30318-30337 | Msa1406120:intron | 15.0% |
| !! | TTGTAAATTCAAGAAAAATT+TGG | + | tig0023193:30853-30872 | None:intergenic | 15.0% |
| !!! | AAATTTTTCTTGAATTTACA+AGG | - | tig0023193:30852-30871 | Msa1406120:intron | 15.0% |
| !!! | AATTTTTCTTGAATTTACAA+GGG | - | tig0023193:30853-30872 | Msa1406120:intron | 15.0% |
| !! | AATCATATTAAATTTAACGT+TGG | - | tig0023193:31203-31222 | Msa1406120:intron | 15.0% |
| !! | TGTTTCATATTAATTTCAAT+TGG | + | tig0023193:31602-31621 | None:intergenic | 15.0% |
| !! | CCAAAATTCAAATAAATTAA+GGG | + | tig0023193:31817-31836 | None:intergenic | 15.0% |
| !! | ACCAAAATTCAAATAAATTA+AGG | + | tig0023193:31818-31837 | None:intergenic | 15.0% |
| !!! | ATTTTCAATATAAGCATTTT+TGG | - | tig0023193:31849-31868 | Msa1406120:intron | 15.0% |
| !! | TCAATATAATGCATTTAAAT+TGG | - | tig0023193:31897-31916 | Msa1406120:intron | 15.0% |
| !!! | AATTGGTAGTAAAATAATAT+TGG | - | tig0023193:31914-31933 | Msa1406120:intron | 15.0% |
| !!! | ATTGGTAGTAAAATAATATT+GGG | - | tig0023193:31915-31934 | Msa1406120:intron | 15.0% |
| !!! | TATCTATTTATAGAGTTTTT+GGG | + | tig0023193:33719-33738 | None:intergenic | 15.0% |
| !!! | ATATCTATTTATAGAGTTTT+TGG | + | tig0023193:33720-33739 | None:intergenic | 15.0% |
| !! | AAATAATCTAATAAAAACAC+CGG | + | tig0023193:35079-35098 | None:intergenic | 15.0% |
| !! | AAAAAATTGCTTATTAGTTA+GGG | - | tig0023193:35153-35172 | Msa1406120:intron | 15.0% |
| !!! | ACATTCATGTTAAATATTTT+GGG | + | tig0023193:35656-35675 | None:intergenic | 15.0% |
| !! | GATAAAAAGAAATATTAGAA+TGG | - | tig0023193:35689-35708 | Msa1406120:intron | 15.0% |
| !! | AAACAAAAAAAAAAACATCA+TGG | - | tig0023193:35901-35920 | Msa1406120:intron | 15.0% |
| !! | AACAAAAAAAAAAACATCAT+GGG | - | tig0023193:35902-35921 | Msa1406120:intron | 15.0% |
| !!! | GAAAAGTGTTAAATATTAAT+TGG | - | tig0023193:36033-36052 | Msa1406120:intron | 15.0% |
| !!! | TTTTTTTACTATTATCACTA+AGG | + | tig0023193:36084-36103 | None:intergenic | 15.0% |
| !! | AAATGAAATCGAATATAAAT+TGG | + | tig0023193:36438-36457 | None:intergenic | 15.0% |
| !! | AATTGATTAAATTTGATTGT+TGG | - | tig0023193:36536-36555 | Msa1406120:intron | 15.0% |
| !! | ATACTAAATGTTATGAAAAT+TGG | + | tig0023193:37184-37203 | None:intergenic | 15.0% |
| !! | TTATAAGAAATTAAGCAAAA+GGG | - | tig0023193:30285-30304 | Msa1406120:intron | 15.0% |
| !!! | ATTTTTAATTATGTATTTGC+AGG | - | tig0023193:30318-30337 | Msa1406120:intron | 15.0% |
| !! | CTAGTAAATGTTATGAAAAT+TGG | + | tig0023193:29072-29091 | None:intergenic | 20.0% |
| !!! | TTTTAACTAACTTGTTATGT+TGG | - | tig0023193:29190-29209 | Msa1406120:intron | 20.0% |
| !!! | ATGAATTGTTAATTTGGTTA+TGG | - | tig0023193:29281-29300 | Msa1406120:CDS | 20.0% |
| !! | ATACAGATTACAAAATTTCA+CGG | + | tig0023193:29672-29691 | None:intergenic | 20.0% |
| !!! | AATAAAAAAAGTCTTGTAGA+AGG | + | tig0023193:29937-29956 | None:intergenic | 20.0% |
| !!! | CATAGCTTTTCTTTAAAATT+GGG | - | tig0023193:30185-30204 | Msa1406120:CDS | 20.0% |
| !! | AATTTCTTATAAGTAAGGAA+AGG | + | tig0023193:30277-30296 | None:intergenic | 20.0% |
| !! | TGCTTAATTTCTTATAAGTA+AGG | + | tig0023193:30282-30301 | None:intergenic | 20.0% |
| !! | CTTATAAGAAATTAAGCAAA+AGG | - | tig0023193:30284-30303 | Msa1406120:intron | 20.0% |
| !! | GATATTTATAACTAATAGTG+TGG | - | tig0023193:30581-30600 | Msa1406120:intron | 20.0% |
| !! | AATAACATTAAATGGTAATC+TGG | + | tig0023193:30742-30761 | None:intergenic | 20.0% |
| !!! | AAACGAAAAATTCAAGTTAA+CGG | + | tig0023193:30903-30922 | None:intergenic | 20.0% |
| !!! | TTTTTTTTGGTACATTGATT+TGG | - | tig0023193:30963-30982 | Msa1406120:intron | 20.0% |
| !!! | TAATATGATTTGTAAACTTC+TGG | + | tig0023193:31193-31212 | None:intergenic | 20.0% |
| !!! | TTTTTTTTAGAATGTACGAA+AGG | - | tig0023193:31374-31393 | Msa1406120:intron | 20.0% |
| !! | TAATTGATGCATCAAATAAA+TGG | - | tig0023193:31458-31477 | Msa1406120:intron | 20.0% |
| !!! | TAACTTCTAAGTTATGTTTT+TGG | - | tig0023193:31721-31740 | Msa1406120:intron | 20.0% |
| !!! | CCCTTAATTTATTTGAATTT+TGG | - | tig0023193:31814-31833 | Msa1406120:intron | 20.0% |
| !!! | AATTAGTTTTCCCAATATTA+GGG | - | tig0023193:32039-32058 | Msa1406120:intron | 20.0% |
| !!! | AAAAGAGACATTCATTTTAT+TGG | + | tig0023193:32231-32250 | None:intergenic | 20.0% |
| !!! | AATAAAATGAATGTCTCTTT+TGG | - | tig0023193:32230-32249 | Msa1406120:intron | 20.0% |
| !! | ACATAAGAAAAGACATATTT+CGG | + | tig0023193:32366-32385 | None:intergenic | 20.0% |
| !! | ACCAATTGTTACATATATTT+GGG | + | tig0023193:32496-32515 | None:intergenic | 20.0% |
| !! | AAGTTTATAAATTCAGCAAT+TGG | + | tig0023193:32792-32811 | None:intergenic | 20.0% |
| !! | ATTAACATTGTTGAAACAAA+TGG | + | tig0023193:33070-33089 | None:intergenic | 20.0% |
| !! | TTTGTTTCAACAATGTTAAT+TGG | - | tig0023193:33070-33089 | Msa1406120:intron | 20.0% |
| !! | ACTCTATAAATAGATATCAA+AGG | - | tig0023193:33723-33742 | Msa1406120:intron | 20.0% |
| !! | AAATCAATTCTTTCTTATCT+TGG | - | tig0023193:33948-33967 | Msa1406120:intron | 20.0% |
| !! | AGTTACATGTTTAATTGTAA+AGG | - | tig0023193:34527-34546 | Msa1406120:intron | 20.0% |
| !! | GTTACATGATTTAATTATGA+CGG | + | tig0023193:34602-34621 | None:intergenic | 20.0% |
| !! | ATCTTTCTCAATACATAAAA+TGG | + | tig0023193:34937-34956 | None:intergenic | 20.0% |
| !! | CAAAAAATTGCTTATTAGTT+AGG | - | tig0023193:35152-35171 | Msa1406120:intron | 20.0% |
| !! | CTAAAACAAACCTAAAATTT+GGG | + | tig0023193:35179-35198 | None:intergenic | 20.0% |
| !!! | CAAATTTTAGGTTTGTTTTA+GGG | - | tig0023193:35178-35197 | Msa1406120:intron | 20.0% |
| !! | AACGAAAATTGTTTGAATAA+AGG | - | tig0023193:35571-35590 | Msa1406120:intron | 20.0% |
| !! | GTAATAAAGCAAAACAATAT+AGG | - | tig0023193:35593-35612 | Msa1406120:intron | 20.0% |
| !!! | ATCTTTTGATATTCATCTTT+TGG | + | tig0023193:35627-35646 | None:intergenic | 20.0% |
| !!! | CATTCATGTTAAATATTTTG+GGG | + | tig0023193:35655-35674 | None:intergenic | 20.0% |
| !!! | CACATTCATGTTAAATATTT+TGG | + | tig0023193:35657-35676 | None:intergenic | 20.0% |
| !!! | TTTTCTAGTTTCTAAGTAAA+AGG | + | tig0023193:35782-35801 | None:intergenic | 20.0% |
| !! | TTGAATTGAAAATCTGAAAA+AGG | + | tig0023193:36913-36932 | None:intergenic | 20.0% |
| !!! | TTTTAACTAACTTGTTATGT+TGG | - | tig0023193:29190-29209 | Msa1406120:intron | 20.0% |
| !! | ATGTTCTGTTATTGTTAATT+TGG | - | tig0023193:37325-37344 | Msa1406120:intron | 20.0% |
| !!! | TGTTATTGTTAATTTGGTTA+TGG | - | tig0023193:37331-37350 | Msa1406120:intron | 20.0% |
| !!! | AATAAAAAAAGTCTTGTAGA+AGG | + | tig0023193:29937-29956 | None:intergenic | 20.0% |
| !!! | CATAGCTTTTCTTTAAAATT+GGG | - | tig0023193:30185-30204 | Msa1406120:CDS | 20.0% |
| !! | AATTTCTTATAAGTAAGGAA+AGG | + | tig0023193:30277-30296 | None:intergenic | 20.0% |
| !! | TGCTTAATTTCTTATAAGTA+AGG | + | tig0023193:30282-30301 | None:intergenic | 20.0% |
| !! | CTTATAAGAAATTAAGCAAA+AGG | - | tig0023193:30284-30303 | Msa1406120:intron | 20.0% |
| ! | ATATATTTGCTTCAGAAACA+AGG | - | tig0023193:28681-28700 | Msa1406120:CDS | 25.0% |
| ! | TATATTTGCTTCAGAAACAA+GGG | - | tig0023193:28682-28701 | Msa1406120:CDS | 25.0% |
| !! | AATATAGATAAGCCTTTTTC+AGG | - | tig0023193:28753-28772 | Msa1406120:intron | 25.0% |
| ! | TTGAATTGAAAACCTGAAAA+AGG | + | tig0023193:28768-28787 | None:intergenic | 25.0% |
| !! | AGAAGAAAAAAGAGGATTTT+AGG | - | tig0023193:28848-28867 | Msa1406120:intron | 25.0% |
| !! | GAAGAAAAAAGAGGATTTTA+GGG | - | tig0023193:28849-28868 | Msa1406120:intron | 25.0% |
| !! | TGTTTCAATTTCCAATTTTC+AGG | - | tig0023193:28908-28927 | Msa1406120:intron | 25.0% |
| ! | TGAATTGAAAACCTGAAAAT+TGG | + | tig0023193:28922-28941 | None:intergenic | 25.0% |
| !!! | ACTTGGATTTCTTTTTTGTT+CGG | + | tig0023193:28982-29001 | None:intergenic | 25.0% |
| ! | ATAAATAGATAGATAGAGAG+AGG | + | tig0023193:29030-29049 | None:intergenic | 25.0% |
| !!! | GCAATTTTTAAGAAAACCTA+CGG | + | tig0023193:29590-29609 | None:intergenic | 25.0% |
| !! | GTTTTCTTAAAAATTGCTCT+AGG | - | tig0023193:29593-29612 | Msa1406120:CDS | 25.0% |
| !!! | GCAATTTTTAAGAAAACCTA+CGG | + | tig0023193:29590-29609 | None:intergenic | 25.0% |
| !! | GTTTTCTTAAAAATTGCTCT+AGG | - | tig0023193:29593-29612 | Msa1406120:CDS | 25.0% |
| !!! | CCAATTTTAAAGAAAAGCTA+TGG | + | tig0023193:30187-30206 | None:intergenic | 25.0% |
| !!! | CCATAGCTTTTCTTTAAAAT+TGG | - | tig0023193:30184-30203 | Msa1406120:CDS | 25.0% |
| ! | AGTTATAAATATCGTTTCTC+TGG | + | tig0023193:30574-30593 | None:intergenic | 25.0% |
| ! | GAAACGTGAATAACATTAAA+TGG | + | tig0023193:30750-30769 | None:intergenic | 25.0% |
| ! | TTTGCCTTGAAAACAAAATT+CGG | - | tig0023193:30817-30836 | Msa1406120:intron | 25.0% |
| !! | CTAAGAGAGTATGTTATTAA+TGG | - | tig0023193:30924-30943 | Msa1406120:intron | 25.0% |
| !!! | TGTTATTAATGGTGTTGATT+TGG | - | tig0023193:30935-30954 | Msa1406120:intron | 25.0% |
| !!! | TGATTTGGTGGATTTTTTTT+TGG | - | tig0023193:30950-30969 | Msa1406120:intron | 25.0% |
| ! | CTTTCGTTTAAACAGTAAAA+AGG | + | tig0023193:31003-31022 | None:intergenic | 25.0% |
| !! | AAAAGTGTAGTATAAACTTC+TGG | + | tig0023193:31132-31151 | None:intergenic | 25.0% |
| !!! | TTAATTTGTGAACTTCCTTT+GGG | + | tig0023193:31341-31360 | None:intergenic | 25.0% |
| ! | TAAAATAACTCACAAACTTC+TGG | + | tig0023193:31513-31532 | None:intergenic | 25.0% |
| ! | CAAGGAAAAACAAATACAAA+TGG | - | tig0023193:31637-31656 | Msa1406120:intron | 25.0% |
| ! | AACTTTAGACGTCTAAATAA+TGG | + | tig0023193:31673-31692 | None:intergenic | 25.0% |
| ! | TTGGAACATTAATTCAAACA+TGG | - | tig0023193:31740-31759 | Msa1406120:intron | 25.0% |
| ! | TCATGGCAATTTATAATAGA+CGG | + | tig0023193:31963-31982 | None:intergenic | 25.0% |
| !!! | GAATTAGTTTTCCCAATATT+AGG | - | tig0023193:32038-32057 | Msa1406120:intron | 25.0% |
| !!! | ATTAGTTTTCCCAATATTAG+GGG | - | tig0023193:32040-32059 | Msa1406120:intron | 25.0% |
| !! | TGAGTTATCTTTTGAACTTT+TGG | + | tig0023193:32172-32191 | None:intergenic | 25.0% |
| !! | CTTTTCTATTTAGCAATGTT+TGG | + | tig0023193:32283-32302 | None:intergenic | 25.0% |
| ! | CAAACATTGCTAAATAGAAA+AGG | - | tig0023193:32281-32300 | Msa1406120:intron | 25.0% |
| ! | CATAAGAAAAGACATATTTC+GGG | + | tig0023193:32365-32384 | None:intergenic | 25.0% |
| !! | ATATAGTTGATGTAACACTA+TGG | - | tig0023193:32393-32412 | Msa1406120:intron | 25.0% |
| !! | TATAGTTGATGTAACACTAT+GGG | - | tig0023193:32394-32413 | Msa1406120:intron | 25.0% |
| ! | ACCCAAATATATGTAACAAT+TGG | - | tig0023193:32492-32511 | Msa1406120:intron | 25.0% |
| ! | GACCAATTGTTACATATATT+TGG | + | tig0023193:32497-32516 | None:intergenic | 25.0% |
| ! | AATATATGTAACAATTGGTC+AGG | - | tig0023193:32497-32516 | Msa1406120:intron | 25.0% |
| ! | TGGTCAAAAAACAATCAAAT+CGG | + | tig0023193:32634-32653 | None:intergenic | 25.0% |
| ! | TGCATTTATCTAGACTTTAT+AGG | - | tig0023193:33121-33140 | Msa1406120:intron | 25.0% |
| ! | AGACTTTATAGGAAGATAAT+AGG | - | tig0023193:33132-33151 | Msa1406120:intron | 25.0% |
| ! | TAGTCTAATGCATATTTACA+TGG | + | tig0023193:33258-33277 | None:intergenic | 25.0% |
| !! | AAGCTTTTACTTGAAATTCT+GGG | + | tig0023193:33639-33658 | None:intergenic | 25.0% |
| !! | AATTTCAAGTAAAAGCTTGT+GGG | - | tig0023193:33641-33660 | Msa1406120:intron | 25.0% |
| ! | TGATGATCAATTCAAAATGA+AGG | + | tig0023193:33899-33918 | None:intergenic | 25.0% |
| ! | ATGAGACTTTACAAAATGTT+TGG | + | tig0023193:34027-34046 | None:intergenic | 25.0% |
| ! | AAAGATTGTAAAAGTCTAAG+TGG | - | tig0023193:34160-34179 | Msa1406120:intron | 25.0% |
| ! | AAGATTGTAAAAGTCTAAGT+GGG | - | tig0023193:34161-34180 | Msa1406120:intron | 25.0% |
| ! | GCTTAGTATAATAAATGTGT+TGG | + | tig0023193:34422-34441 | None:intergenic | 25.0% |
| ! | AATAAAATAGTCACATGGAA+GGG | + | tig0023193:34569-34588 | None:intergenic | 25.0% |
| ! | AAGTGAATAAAATAGTCACA+TGG | + | tig0023193:34574-34593 | None:intergenic | 25.0% |
| ! | CTTAGGTATAGTATGAAAAA+GGG | + | tig0023193:34670-34689 | None:intergenic | 25.0% |
| !!! | TGTAGGAATTATTTTGTTTG+AGG | - | tig0023193:35014-35033 | Msa1406120:intron | 25.0% |
| !!! | AATTATTTTGTTTGAGGAGT+TGG | - | tig0023193:35020-35039 | Msa1406120:intron | 25.0% |
| !!! | ATTGTTTTTTGTATGAAGTC+CGG | - | tig0023193:35057-35076 | Msa1406120:intron | 25.0% |
| ! | GTAAATGACATTTATGCTTT+AGG | - | tig0023193:35125-35144 | Msa1406120:intron | 25.0% |
| ! | CCTAAAACAAACCTAAAATT+TGG | + | tig0023193:35180-35199 | None:intergenic | 25.0% |
| !!! | CCAAATTTTAGGTTTGTTTT+AGG | - | tig0023193:35177-35196 | Msa1406120:intron | 25.0% |
| !!! | GAGGTTTATTTTAAAATGTC+TGG | + | tig0023193:35243-35262 | None:intergenic | 25.0% |
| !! | TACTGATATTGTTTTCTTCT+AGG | + | tig0023193:35350-35369 | None:intergenic | 25.0% |
| !! | TTTGCCTCTTAATGTTTTAT+TGG | + | tig0023193:35490-35509 | None:intergenic | 25.0% |
| !! | AATATGCTATGCTTAACTTT+TGG | + | tig0023193:35550-35569 | None:intergenic | 25.0% |
| ! | ATATTGCTAAGTTGTATGAT+TGG | + | tig0023193:35966-35985 | None:intergenic | 25.0% |
| ! | TTAAGTGCTTTACTCTAATT+CGG | + | tig0023193:36007-36026 | None:intergenic | 25.0% |
| ! | TACAGTAACAAACTAATGAA+TGG | + | tig0023193:36170-36189 | None:intergenic | 25.0% |
| ! | GTATAAAATGTCATCATGAA+TGG | + | tig0023193:36210-36229 | None:intergenic | 25.0% |
| !! | AAAAATATTTTGCCGTGTAA+TGG | - | tig0023193:36348-36367 | Msa1406120:intron | 25.0% |
| ! | TTAATCAATTCAATCCTATG+AGG | + | tig0023193:36526-36545 | None:intergenic | 25.0% |
| !! | TTCTCGATTTTATTAACCAA+AGG | + | tig0023193:36736-36755 | None:intergenic | 25.0% |
| ! | AAGGCTTATCCATATTTAAT+CGG | + | tig0023193:36894-36913 | None:intergenic | 25.0% |
| !!! | ACTTGGATTTCTTTTTTGTT+CGG | + | tig0023193:28982-29001 | None:intergenic | 25.0% |
| ! | AAATTGGAATGATAGATAGA+GGG | + | tig0023193:37168-37187 | None:intergenic | 25.0% |
| ! | AAAATTGGAATGATAGATAG+AGG | + | tig0023193:37169-37188 | None:intergenic | 25.0% |
| ! | TAAAAAAAAAGCAGAAGAAG+AGG | - | tig0023193:37528-37547 | Msa1406120:intron | 25.0% |
| !!! | GCAATTTTTAAGAAAACCTA+CGG | + | tig0023193:29590-29609 | None:intergenic | 25.0% |
| !! | GTTTTCTTAAAAATTGCTCT+AGG | - | tig0023193:29593-29612 | Msa1406120:CDS | 25.0% |
| !!! | GGAATTTTTAAGAAAACCTA+CGG | + | tig0023193:37907-37926 | None:intergenic | 25.0% |
| !! | GTTTTCTTAAAAATTCCTCT+AGG | - | tig0023193:37910-37929 | Msa1406120:intron | 25.0% |
| !!! | CCAATTTTAAAGAAAAGCTA+TGG | + | tig0023193:30187-30206 | None:intergenic | 25.0% |
| !!! | CCATAGCTTTTCTTTAAAAT+TGG | - | tig0023193:30184-30203 | Msa1406120:CDS | 25.0% |
| TAATTTACTCTCACAACAAG+CGG | - | tig0023193:28612-28631 | Msa1406120:CDS | 30.0% | |
| AACTCAGAAAAGAAAACCTA+AGG | - | tig0023193:28792-28811 | Msa1406120:intron | 30.0% | |
| GAAAGAGAATGATTAGGAAA+TGG | + | tig0023193:28883-28902 | None:intergenic | 30.0% | |
| AAGAACGAAAGAGAATGATT+AGG | + | tig0023193:28889-28908 | None:intergenic | 30.0% | |
| TTATGATCAGATTTATCGTC+AGG | - | tig0023193:29158-29177 | Msa1406120:intron | 30.0% | |
| !! | AGTTGTTTCTTAGTAAGGAA+AGG | + | tig0023193:29793-29812 | None:intergenic | 30.0% |
| !! | AAGCAAGTTGTTTCTTAGTA+AGG | + | tig0023193:29798-29817 | None:intergenic | 30.0% |
| GAATAGAAGTGGTATACTTA+TGG | + | tig0023193:30108-30127 | None:intergenic | 30.0% | |
| AGATGAAAAGTGAATAGAAG+TGG | + | tig0023193:30119-30138 | None:intergenic | 30.0% | |
| CTTCTTACTAATACACCAAA+TGG | - | tig0023193:30211-30230 | Msa1406120:intron | 30.0% | |
| CGACACAAAATAATAAACCT+AGG | + | tig0023193:30496-30515 | None:intergenic | 30.0% | |
| TTGAATAAATAGCTTGACGA+AGG | + | tig0023193:30675-30694 | None:intergenic | 30.0% | |
| !!! | TTTTTTGCAAGAGGCAAAAT+TGG | + | tig0023193:30772-30791 | None:intergenic | 30.0% |
| !!! | GAAACCGAATTTTGTTTTCA+AGG | + | tig0023193:30824-30843 | None:intergenic | 30.0% |
| !! | TATTAATGGTGTTGATTTGG+TGG | - | tig0023193:30938-30957 | Msa1406120:intron | 30.0% |
| !!! | TTTTTGGTACATTGATTTGG+TGG | - | tig0023193:30966-30985 | Msa1406120:intron | 30.0% |
| TATATGTTACTAGTTCCCAA+AGG | - | tig0023193:31323-31342 | Msa1406120:intron | 30.0% | |
| !! | CTTAATTTGTGAACTTCCTT+TGG | + | tig0023193:31342-31361 | None:intergenic | 30.0% |
| ACATCTTGTATGTTCATACA+AGG | - | tig0023193:31619-31638 | Msa1406120:intron | 30.0% | |
| !! | AAAATCCAATTATTGGCTCA+TGG | + | tig0023193:31980-31999 | None:intergenic | 30.0% |
| !!! | TTTTTTTACAACCCAGTAGT+AGG | - | tig0023193:31999-32018 | Msa1406120:intron | 30.0% |
| !! | TTAGTTTTCCCAATATTAGG+GGG | - | tig0023193:32041-32060 | Msa1406120:intron | 30.0% |
| TATTATCTCCCCCTAATATT+GGG | + | tig0023193:32052-32071 | None:intergenic | 30.0% | |
| TTATTATCTCCCCCTAATAT+TGG | + | tig0023193:32053-32072 | None:intergenic | 30.0% | |
| ! | TTTTGTCATCATCAGATGAT+AGG | - | tig0023193:32316-32335 | Msa1406120:intron | 30.0% |
| ! | TCATGTGCATAATTTGTGTT+AGG | - | tig0023193:32898-32917 | Msa1406120:intron | 30.0% |
| AAACATACTGCATCACTATT+TGG | - | tig0023193:32921-32940 | Msa1406120:intron | 30.0% | |
| AAATTCAATCCTAACCAGTT+TGG | - | tig0023193:32953-32972 | Msa1406120:intron | 30.0% | |
| TAATACAATCCAAACTGGTT+AGG | + | tig0023193:32965-32984 | None:intergenic | 30.0% | |
| TCTCATAATACAATCCAAAC+TGG | + | tig0023193:32970-32989 | None:intergenic | 30.0% | |
| CAACAATGTTAATTGGTCAA+CGG | - | tig0023193:33077-33096 | Msa1406120:intron | 30.0% | |
| AACAATGTTAATTGGTCAAC+GGG | - | tig0023193:33078-33097 | Msa1406120:intron | 30.0% | |
| ! | ATGCGTTCATATGATTTTCT+GGG | + | tig0023193:33488-33507 | None:intergenic | 30.0% |
| ! | TATGCGTTCATATGATTTTC+TGG | + | tig0023193:33489-33508 | None:intergenic | 30.0% |
| ! | CAAGCTTTTACTTGAAATTC+TGG | + | tig0023193:33640-33659 | None:intergenic | 30.0% |
| ! | GAATTTCAAGTAAAAGCTTG+TGG | - | tig0023193:33640-33659 | Msa1406120:intron | 30.0% |
| ! | ATTTCAAGTAAAAGCTTGTG+GGG | - | tig0023193:33642-33661 | Msa1406120:intron | 30.0% |
| ! | CATTTTGAATTGATCATCAC+TGG | - | tig0023193:33900-33919 | Msa1406120:intron | 30.0% |
| ! | AAAGTGTTAGTTTGAGAAGA+AGG | - | tig0023193:34055-34074 | Msa1406120:intron | 30.0% |
| TGTAATTGTTCAGATGAACA+AGG | - | tig0023193:34234-34253 | Msa1406120:intron | 30.0% | |
| ! | TGATTCTCAAGTTGTTTACT+TGG | + | tig0023193:34501-34520 | None:intergenic | 30.0% |
| ATAAAATAGTCACATGGAAG+GGG | + | tig0023193:34568-34587 | None:intergenic | 30.0% | |
| GAATAAAATAGTCACATGGA+AGG | + | tig0023193:34570-34589 | None:intergenic | 30.0% | |
| CCTTAGGTATAGTATGAAAA+AGG | + | tig0023193:34671-34690 | None:intergenic | 30.0% | |
| !! | CCTTTTTCATACTATACCTA+AGG | - | tig0023193:34668-34687 | Msa1406120:intron | 30.0% |
| TTGGATCTAGAAATTCTTGT+AGG | - | tig0023193:34997-35016 | Msa1406120:intron | 30.0% | |
| !! | TTTGTTTCTGGAACTTATAG+AGG | + | tig0023193:35262-35281 | None:intergenic | 30.0% |
| TCAAATTTCCAGTTTCTATC+TGG | + | tig0023193:35297-35316 | None:intergenic | 30.0% | |
| GAAGCCAATAAAACATTAAG+AGG | - | tig0023193:35483-35502 | Msa1406120:intron | 30.0% | |
| TCGAATGAGAGTAAGAAAAA+AGG | + | tig0023193:35862-35881 | None:intergenic | 30.0% | |
| ATTGGTACTTCTTTCAACAA+CGG | + | tig0023193:35948-35967 | None:intergenic | 30.0% | |
| TAAGTGCTTTACTCTAATTC+GGG | + | tig0023193:36006-36025 | None:intergenic | 30.0% | |
| AAAACGAGCAATTCTGTTTA+AGG | + | tig0023193:36232-36251 | None:intergenic | 30.0% | |
| GTTAACACGCGATTAAAAAT+AGG | + | tig0023193:36568-36587 | None:intergenic | 30.0% | |
| AACTCAGAAAAGAAAACCTA+GGG | - | tig0023193:28792-28811 | Msa1406120:intron | 30.0% | |
| ! | AGAAGAAAAGAGAGGATTTT+AGG | - | tig0023193:36990-37009 | Msa1406120:intron | 30.0% |
| ! | GAAGAAAAGAGAGGATTTTA+GGG | - | tig0023193:36991-37010 | Msa1406120:intron | 30.0% |
| GAAAGAGAATGATTAGGAAA+TGG | + | tig0023193:28883-28902 | None:intergenic | 30.0% | |
| ATCGAAGAAAGAGAATGATT+AGG | + | tig0023193:37031-37050 | None:intergenic | 30.0% | |
| GTTGAATTGAAAACCTGAAA+AGG | + | tig0023193:28769-28788 | None:intergenic | 30.0% | |
| TTATGATCAGATTTATCGTC+AGG | - | tig0023193:29158-29177 | Msa1406120:intron | 30.0% | |
| GAATAGAAGTGGTATACTTA+TGG | + | tig0023193:30108-30127 | None:intergenic | 30.0% | |
| AGATGAAAAGTGAATAGAAG+TGG | + | tig0023193:30119-30138 | None:intergenic | 30.0% | |
| !!! | CTTTTTTCTTCTCCTCTCTT+CGG | + | tig0023193:28840-28859 | None:intergenic | 35.0% |
| AAGAGAGGAGAAGAAAAAAG+AGG | - | tig0023193:28840-28859 | Msa1406120:intron | 35.0% | |
| CAGTTTCTTCTTCTTAGACT+TGG | + | tig0023193:28999-29018 | None:intergenic | 35.0% | |
| ! | CATGATGATGATGATGATCT+TGG | - | tig0023193:29320-29339 | Msa1406120:intron | 35.0% |
| !!! | CTCTTCTTCTGCTACTTTTT+TGG | + | tig0023193:29377-29396 | None:intergenic | 35.0% |
| CAAAAAAGTAGCAGAAGAAG+AGG | - | tig0023193:29375-29394 | Msa1406120:intron | 35.0% | |
| TCTTGCTCAAAAAAAACTGC+AGG | - | tig0023193:29423-29442 | Msa1406120:intron | 35.0% | |
| TCTAAATTCACTCTGGTCAT+TGG | - | tig0023193:29483-29502 | Msa1406120:CDS | 35.0% | |
| ! | TTTTGTAGTCATGTTTGGGT+AGG | + | tig0023193:29530-29549 | None:intergenic | 35.0% |
| ! | GCGTTTTTGTAGTCATGTTT+GGG | + | tig0023193:29534-29553 | None:intergenic | 35.0% |
| ! | AGCGTTTTTGTAGTCATGTT+TGG | + | tig0023193:29535-29554 | None:intergenic | 35.0% |
| !! | CGTTGTTTCTTAGTAAGGAA+AGG | + | tig0023193:29629-29648 | None:intergenic | 35.0% |
| !! | AAGCACGTTGTTTCTTAGTA+AGG | + | tig0023193:29634-29653 | None:intergenic | 35.0% |
| ! | TTTTGTAATCTGTATGCAGC+TGG | - | tig0023193:29677-29696 | Msa1406120:CDS | 35.0% |
| ! | GAAAAAGCGTATCATCTTCA+TGG | + | tig0023193:29704-29723 | None:intergenic | 35.0% |
| ! | TTTTGTAATCTGTATGCAGC+TGG | - | tig0023193:29677-29696 | Msa1406120:CDS | 35.0% |
| ! | ATGGATTGACATGAATGTTC+AGG | + | tig0023193:30089-30108 | None:intergenic | 35.0% |
| ATAAGAAGAAAGTCCTAGAG+GGG | + | tig0023193:30254-30273 | None:intergenic | 35.0% | |
| GATAAGAAGAAAGTCCTAGA+GGG | + | tig0023193:30255-30274 | None:intergenic | 35.0% | |
| ! | GTCCAATATCTAGAGTAGTT+GGG | + | tig0023193:30474-30493 | None:intergenic | 35.0% |
| ATAGTACACTTGCAACAACT+AGG | + | tig0023193:30524-30543 | None:intergenic | 35.0% | |
| GTTGCAAGTGTACTATGAAA+TGG | - | tig0023193:30528-30547 | Msa1406120:intron | 35.0% | |
| GTGTACTATGAAATGGCTTT+AGG | - | tig0023193:30535-30554 | Msa1406120:intron | 35.0% | |
| AAGTATGCATAGGAAGTAGA+AGG | + | tig0023193:30627-30646 | None:intergenic | 35.0% | |
| TTCTACTTCCTATGCATACT+TGG | - | tig0023193:30626-30645 | Msa1406120:intron | 35.0% | |
| TAACTTCTCCAAGTATGCAT+AGG | + | tig0023193:30637-30656 | None:intergenic | 35.0% | |
| TTGCCTCTTGCAAAAAACTT+TGG | - | tig0023193:30775-30794 | Msa1406120:intron | 35.0% | |
| !!! | GAACCAAAGTTTTTTGCAAG+AGG | + | tig0023193:30781-30800 | None:intergenic | 35.0% |
| AATTTGTGCTTCAATTGCAC+TGG | + | tig0023193:31162-31181 | None:intergenic | 35.0% | |
| TTTCCGCATCATAATAGATC+CGG | + | tig0023193:31248-31267 | None:intergenic | 35.0% | |
| AAAAATCTAGTTGGTCCACA+TGG | + | tig0023193:31431-31450 | None:intergenic | 35.0% | |
| AATTGCCATGAGCCAATAAT+TGG | - | tig0023193:31972-31991 | Msa1406120:intron | 35.0% | |
| ! | TTGATAATCAGCCTACTACT+GGG | + | tig0023193:32013-32032 | None:intergenic | 35.0% |
| ! | ATTGATAATCAGCCTACTAC+TGG | + | tig0023193:32014-32033 | None:intergenic | 35.0% |
| GTAGTAGGCTGATTATCAAT+TGG | - | tig0023193:32014-32033 | Msa1406120:intron | 35.0% | |
| !! | GGTTCATACTGATTTCTAAG+AGG | + | tig0023193:32151-32170 | None:intergenic | 35.0% |
| AAGAACTCAAGGTAAATCGA+TGG | + | tig0023193:32447-32466 | None:intergenic | 35.0% | |
| AAATGGAAGCAAAGAACTCA+AGG | + | tig0023193:32458-32477 | None:intergenic | 35.0% | |
| ! | GGTGTTCATTGACTACAAAA+TGG | + | tig0023193:32475-32494 | None:intergenic | 35.0% |
| GTCTTAAACTTCTCAACAAC+CGG | + | tig0023193:32551-32570 | None:intergenic | 35.0% | |
| CGACAACAATTCAAGAAACA+TGG | + | tig0023193:32654-32673 | None:intergenic | 35.0% | |
| ! | TGATTTTTCCAAACTGTCTC+AGG | - | tig0023193:32761-32780 | Msa1406120:intron | 35.0% |
| CATTGATGTCTTCGAACATT+TGG | + | tig0023193:32999-33018 | None:intergenic | 35.0% | |
| TCGAAGACATCAATGTCAAA+TGG | - | tig0023193:33004-33023 | Msa1406120:intron | 35.0% | |
| GTTAGCTATATATGCACATG+CGG | - | tig0023193:33028-33047 | Msa1406120:intron | 35.0% | |
| ACAATGTTAATTGGTCAACG+GGG | - | tig0023193:33079-33098 | Msa1406120:intron | 35.0% | |
| GTGTCAAGAACATTTCTGAA+AGG | - | tig0023193:33318-33337 | Msa1406120:intron | 35.0% | |
| CACAAACATCATAAAGTTGC+TGG | + | tig0023193:33440-33459 | None:intergenic | 35.0% | |
| GGTTCATCATGATATTCATC+TGG | + | tig0023193:33555-33574 | None:intergenic | 35.0% | |
| GTTCTTGAAGATCTTCATCA+GGG | + | tig0023193:33576-33595 | None:intergenic | 35.0% | |
| TGTTCTTGAAGATCTTCATC+AGG | + | tig0023193:33577-33596 | None:intergenic | 35.0% | |
| ! | AGAAGGTGTAAAAGTCTAAG+TGG | - | tig0023193:34072-34091 | Msa1406120:intron | 35.0% |
| ! | GAAGGTGTAAAAGTCTAAGT+GGG | - | tig0023193:34073-34092 | Msa1406120:intron | 35.0% |
| AAGTGGGTAACTTAACAAGA+AGG | - | tig0023193:34089-34108 | Msa1406120:intron | 35.0% | |
| GAACACACAGAGATTTATAG+TGG | + | tig0023193:34353-34372 | None:intergenic | 35.0% | |
| ATAAAAGTCTAGAGAGACCA+GGG | + | tig0023193:34715-34734 | None:intergenic | 35.0% | |
| ! | GAACAGTTGTTAGTGACTTT+TGG | - | tig0023193:34978-34997 | Msa1406120:intron | 35.0% |
| ! | TTAGTTAGGGCCCAAATTTT+AGG | - | tig0023193:35166-35185 | Msa1406120:intron | 35.0% |
| TTCAACGTTAATCAAGAGTG+AGG | + | tig0023193:35430-35449 | None:intergenic | 35.0% | |
| ! | TTCATGAGTTTTGCTTCGTA+TGG | + | tig0023193:35805-35824 | None:intergenic | 35.0% |
| CAACAACGGAAAAATCTTCT+TGG | + | tig0023193:35934-35953 | None:intergenic | 35.0% | |
| GCTGCTAGGTATAAGTAAAA+CGG | + | tig0023193:36296-36315 | None:intergenic | 35.0% | |
| GAATGAATTCTCTACTGTAG+CGG | + | tig0023193:36318-36337 | None:intergenic | 35.0% | |
| TTAATTCGATTGCTCCTCAT+AGG | - | tig0023193:36509-36528 | Msa1406120:intron | 35.0% | |
| CAACTCAGAAAAGAAAACCT+AGG | - | tig0023193:28791-28810 | Msa1406120:intron | 35.0% | |
| !! | CTTCTGAAATTCCTTGGATT+CGG | + | tig0023193:36965-36984 | None:intergenic | 35.0% |
| !! | TCTTCTCTTCTGAAATTCCT+TGG | + | tig0023193:36971-36990 | None:intergenic | 35.0% |
| AAGAGAAGAGAAGAAAAGAG+AGG | - | tig0023193:36982-37001 | Msa1406120:intron | 35.0% | |
| CAGTTTCTTCTTCTTAGACT+TGG | + | tig0023193:28999-29018 | None:intergenic | 35.0% | |
| ! | CATGATGATGATGATGATCT+TGG | - | tig0023193:29320-29339 | Msa1406120:intron | 35.0% |
| GAAAGTAAGAGAGACAGAAA+CGG | + | tig0023193:37406-37425 | None:intergenic | 35.0% | |
| TCATCTTCCATCGTATTTGT+AGG | - | tig0023193:37432-37451 | Msa1406120:CDS | 35.0% | |
| GATAGTACCTACAAATACGA+TGG | + | tig0023193:37442-37461 | None:intergenic | 35.0% | |
| !!! | CTCTTCTTCTGCTACTTTTT+TGG | + | tig0023193:29377-29396 | None:intergenic | 35.0% |
| CAAAAAAGTAGCAGAAGAAG+AGG | - | tig0023193:29375-29394 | Msa1406120:intron | 35.0% | |
| TCTTGCTCAAAAAAAACTGC+AGG | - | tig0023193:29423-29442 | Msa1406120:intron | 35.0% | |
| ! | TTTTGTAGTCATGTTTGGGT+AGG | + | tig0023193:29530-29549 | None:intergenic | 35.0% |
| ! | GCGTTTTTGTAGTCATGTTT+GGG | + | tig0023193:29534-29553 | None:intergenic | 35.0% |
| ! | AGCGTTTTTGTAGTCATGTT+TGG | + | tig0023193:29535-29554 | None:intergenic | 35.0% |
| !! | CGTTGTTTCTTAGTAAGGAA+AGG | + | tig0023193:29629-29648 | None:intergenic | 35.0% |
| !! | AAGCACGTTGTTTCTTAGTA+AGG | + | tig0023193:29634-29653 | None:intergenic | 35.0% |
| ! | TTTTGTAATCTGTATGCAGC+TGG | - | tig0023193:29677-29696 | Msa1406120:CDS | 35.0% |
| ! | GAAAAAGCGTATCATCTTCA+TGG | + | tig0023193:29704-29723 | None:intergenic | 35.0% |
| !! | CGTTGTTTCTTAGTAAGGAA+AGG | + | tig0023193:29629-29648 | None:intergenic | 35.0% |
| !! | AAGCACGTTGTTTCTTAGTA+AGG | + | tig0023193:29634-29653 | None:intergenic | 35.0% |
| ! | TTTTGTAATCTGTATGCAGC+TGG | - | tig0023193:29677-29696 | Msa1406120:CDS | 35.0% |
| AATATCCAGACACACACATT+AGG | + | tig0023193:38155-38174 | None:intergenic | 35.0% | |
| ! | ATGGATTGACATGAATGTTC+AGG | + | tig0023193:30089-30108 | None:intergenic | 35.0% |
| CTTCTTGCTAATACACCAAA+TGG | - | tig0023193:38312-38331 | Msa1406120:CDS | 35.0% | |
| TGAAAATGATATGAAGCCCT+TGG | - | tig0023193:38449-38468 | Msa1406120:intron | 35.0% | |
| !!! | ATAAAGCTGCTTTTCAGGAA+GGG | - | tig0023193:38535-38554 | Msa1406120:intron | 35.0% |
| CTTCGGAAATTCCTTCGATT+CGG | + | tig0023193:28823-28842 | None:intergenic | 40.0% | |
| !! | CTGTTCTGTACTGACTAATC+TGG | - | tig0023193:29221-29240 | Msa1406120:intron | 40.0% |
| !! | TCTGTACTGACTAATCTGGA+TGG | - | tig0023193:29225-29244 | Msa1406120:intron | 40.0% |
| ! | ATGATCTTGGCTCTCTGTAT+AGG | - | tig0023193:29333-29352 | Msa1406120:intron | 40.0% |
| ! | CTCTTGCTCTAAATTCACTC+TGG | - | tig0023193:29476-29495 | Msa1406120:CDS | 40.0% |
| AAATCTACAAACACAGCCGT+AGG | - | tig0023193:29571-29590 | Msa1406120:CDS | 40.0% | |
| GTGAAGCTGTATCATCTTCA+TGG | + | tig0023193:29868-29887 | None:intergenic | 40.0% | |
| GGATAAGAAGAAAGTCCTAG+AGG | + | tig0023193:30256-30275 | None:intergenic | 40.0% | |
| CGAAAATGATATGAAGCCCT+TGG | - | tig0023193:30348-30367 | Msa1406120:intron | 40.0% | |
| !! | AACACAAAACGTTAGCCTTG+AGG | - | tig0023193:30411-30430 | Msa1406120:intron | 40.0% |
| ! | GGTCCAATATCTAGAGTAGT+TGG | + | tig0023193:30475-30494 | None:intergenic | 40.0% |
| CTACTCTAGATATTGGACCT+AGG | - | tig0023193:30476-30495 | Msa1406120:intron | 40.0% | |
| CTGCATAACTGACCTTAGTT+AGG | - | tig0023193:30695-30714 | Msa1406120:intron | 40.0% | |
| TGACCTTAGTTAGGTGACAT+TGG | - | tig0023193:30704-30723 | Msa1406120:intron | 40.0% | |
| TGACCAATGTCACCTAACTA+AGG | + | tig0023193:30710-30729 | None:intergenic | 40.0% | |
| ATCCCGGATCTATTATGATG+CGG | - | tig0023193:31242-31261 | Msa1406120:intron | 40.0% | |
| TTCCGCATCATAATAGATCC+GGG | + | tig0023193:31247-31266 | None:intergenic | 40.0% | |
| !! | TCTGAGCTTGAGAAGTGTTA+AGG | + | tig0023193:32680-32699 | None:intergenic | 40.0% |
| TTTCCAAACTGTCTCAGGTT+AGG | - | tig0023193:32766-32785 | Msa1406120:intron | 40.0% | |
| TCGTTTGGGAAATGCTAAAC+AGG | + | tig0023193:33297-33316 | None:intergenic | 40.0% | |
| TGTTTAGCATTTCCCAAACG+AGG | - | tig0023193:33296-33315 | Msa1406120:intron | 40.0% | |
| ATGTTCTTGACACCTCGTTT+GGG | + | tig0023193:33311-33330 | None:intergenic | 40.0% | |
| AATGTTCTTGACACCTCGTT+TGG | + | tig0023193:33312-33331 | None:intergenic | 40.0% | |
| AGTTATACTGTCTCTGTGTC+TGG | + | tig0023193:33374-33393 | None:intergenic | 40.0% | |
| CTGGGTAAACATTCTGATCA+AGG | + | tig0023193:33621-33640 | None:intergenic | 40.0% | |
| !! | AGAAAGCCTCATCTAGCTTT+AGG | - | tig0023193:34114-34133 | Msa1406120:intron | 40.0% |
| !! | GAAAGCCTCATCTAGCTTTA+GGG | - | tig0023193:34115-34134 | Msa1406120:intron | 40.0% |
| !! | AAAGCCTCATCTAGCTTTAG+GGG | - | tig0023193:34116-34135 | Msa1406120:intron | 40.0% |
| GAACAAGGATTGTAAGATGC+AGG | - | tig0023193:34249-34268 | Msa1406120:intron | 40.0% | |
| TGTAAGATGCAGGATTTGAG+AGG | - | tig0023193:34259-34278 | Msa1406120:intron | 40.0% | |
| GGTTATCTCAAGCATCATAG+TGG | - | tig0023193:34280-34299 | Msa1406120:intron | 40.0% | |
| GAAACTCTCACAAGATTGTG+AGG | - | tig0023193:34302-34321 | Msa1406120:intron | 40.0% | |
| GATAAAAGTCTAGAGAGACC+AGG | + | tig0023193:34716-34735 | None:intergenic | 40.0% | |
| GAGGAGTTGGATATTCTCAT+AGG | - | tig0023193:35033-35052 | Msa1406120:intron | 40.0% | |
| GGGCACCAAAATCTTAGAAA+CGG | - | tig0023193:35198-35217 | Msa1406120:intron | 40.0% | |
| GGCACCAAAATCTTAGAAAC+GGG | - | tig0023193:35199-35218 | Msa1406120:intron | 40.0% | |
| !!! | CAGACCCGTTTCTAAGATTT+TGG | + | tig0023193:35206-35225 | None:intergenic | 40.0% |
| AACTGGCACTTGTTTGTTTC+TGG | + | tig0023193:35274-35293 | None:intergenic | 40.0% | |
| ! | TTCCAGTTTCTATCTGGAAC+TGG | + | tig0023193:35291-35310 | None:intergenic | 40.0% |
| GGAGTTAACTGTTGTCAACA+TGG | + | tig0023193:35375-35394 | None:intergenic | 40.0% | |
| !! | AAGAGTGAGGCTTTAAAACG+AGG | + | tig0023193:35417-35436 | None:intergenic | 40.0% |
| !! | GGGATTAGTTCTCCATTACA+CGG | + | tig0023193:36363-36382 | None:intergenic | 40.0% |
| TAATGGAGAACTAATCCCGA+AGG | - | tig0023193:36365-36384 | Msa1406120:intron | 40.0% | |
| TAACCAGCAGAAATTGCCTT+CGG | + | tig0023193:36384-36403 | None:intergenic | 40.0% | |
| ! | AAGGCAATTTCTGCTGGTTA+CGG | - | tig0023193:36384-36403 | Msa1406120:intron | 40.0% |
| GCATGACGGTTTAAAGATTC+AGG | + | tig0023193:36612-36631 | None:intergenic | 40.0% | |
| TTAAACCGTCATGCTTACTG+CGG | - | tig0023193:36618-36637 | Msa1406120:intron | 40.0% | |
| ATTTACCGCAGTAAGCATGA+CGG | + | tig0023193:36626-36645 | None:intergenic | 40.0% | |
| TCATGCTTACTGCGGTAAAT+CGG | - | tig0023193:36626-36645 | Msa1406120:intron | 40.0% | |
| ATGACTCGAATCGTCTCATA+AGG | + | tig0023193:36760-36779 | None:intergenic | 40.0% | |
| ! | GCTCATCTGCCGATTAAATA+TGG | - | tig0023193:36882-36901 | Msa1406120:intron | 40.0% |
| ! | TCTTCGATTCTGTCCTTTTC+AGG | - | tig0023193:37043-37062 | Msa1406120:intron | 40.0% |
| TTGGAATGATAGATAGAGGG+AGG | + | tig0023193:37165-37184 | None:intergenic | 40.0% | |
| ! | CTCTTGCTCTAAATTCACTC+TGG | - | tig0023193:29476-29495 | Msa1406120:CDS | 40.0% |
| AAATCTACAAACACAGCCGT+AGG | - | tig0023193:29571-29590 | Msa1406120:CDS | 40.0% | |
| AAAGCTACAAACAAAGCCGT+AGG | - | tig0023193:37888-37907 | Msa1406120:intron | 40.0% | |
| AAAGGACAAGACAATCCTAG+AGG | + | tig0023193:29611-29630 | None:intergenic | 40.0% | |
| GTGAAGCTGTATCATCTTCA+TGG | + | tig0023193:29868-29887 | None:intergenic | 40.0% | |
| AACAGGAGATAGGTTTATGC+AGG | + | tig0023193:38122-38141 | None:intergenic | 40.0% | |
| CAGTTTCATGAACAGGAGAT+AGG | + | tig0023193:38132-38151 | None:intergenic | 40.0% | |
| CATTAGGCAGTTTCATGAAC+AGG | + | tig0023193:38139-38158 | None:intergenic | 40.0% | |
| GATAAGAAGACAGTCCTAGA+GGG | + | tig0023193:38356-38375 | None:intergenic | 40.0% | |
| !! | AACACAAAACGTTAGCCTTG+AGG | - | tig0023193:30411-30430 | Msa1406120:intron | 40.0% |
| ! | GAAAAGCAGCTTTATCCTCA+AGG | + | tig0023193:38530-38549 | None:intergenic | 40.0% |
| !!! | TGAGGATAAAGCTGCTTTTC+AGG | - | tig0023193:38530-38549 | Msa1406120:intron | 40.0% |
| !!! | GATAAAGCTGCTTTTCAGGA+AGG | - | tig0023193:38534-38553 | Msa1406120:intron | 40.0% |
| !!! | TAAAGCTGCTTTTCAGGAAG+GGG | - | tig0023193:38536-38555 | Msa1406120:intron | 40.0% |
| AATCGCCAGATGAGCGTATT+TGG | + | tig0023193:28732-28751 | None:intergenic | 45.0% | |
| TCGAAGGAATTTCCGAAGAG+AGG | - | tig0023193:28825-28844 | Msa1406120:intron | 45.0% | |
| AACAACTCGTTCGTTCCCAT+GGG | - | tig0023193:28941-28960 | Msa1406120:intron | 45.0% | |
| AAAGCTACAAACACAGCCGT+AGG | - | tig0023193:29735-29754 | Msa1406120:intron | 45.0% | |
| ! | TATTGTGTTGGCATGTGCAC+AGG | + | tig0023193:29899-29918 | None:intergenic | 45.0% |
| GTGCACATGCCAACACAATA+TGG | - | tig0023193:29899-29918 | Msa1406120:CDS | 45.0% | |
| CATGCCAACACAATATGGCA+AGG | - | tig0023193:29904-29923 | Msa1406120:CDS | 45.0% | |
| ACCTCCTTGCCATATTGTGT+TGG | + | tig0023193:29911-29930 | None:intergenic | 45.0% | |
| AGCAGGAGATAGGTTTATGC+AGG | + | tig0023193:29969-29988 | None:intergenic | 45.0% | |
| CAGTTTCATGAGCAGGAGAT+AGG | + | tig0023193:29979-29998 | None:intergenic | 45.0% | |
| !! | GACTTGTTGAGCTCATCCAA+CGG | + | tig0023193:30391-30410 | None:intergenic | 45.0% |
| ! | GAACAGCAGCTTTATCCTCA+AGG | + | tig0023193:30429-30448 | None:intergenic | 45.0% |
| TGAGGATAAAGCTGCTGTTC+AGG | - | tig0023193:30429-30448 | Msa1406120:intron | 45.0% | |
| GATAAAGCTGCTGTTCAGGA+GGG | - | tig0023193:30433-30452 | Msa1406120:intron | 45.0% | |
| ATAAAGCTGCTGTTCAGGAG+GGG | - | tig0023193:30434-30453 | Msa1406120:intron | 45.0% | |
| CGCCCAACTACTCTAGATAT+TGG | - | tig0023193:30469-30488 | Msa1406120:intron | 45.0% | |
| CAAGACCAGATGAATCATCC+CGG | - | tig0023193:31226-31245 | Msa1406120:intron | 45.0% | |
| TAGATCCGGGATGATTCATC+TGG | + | tig0023193:31234-31253 | None:intergenic | 45.0% | |
| ATACACCGATCATGACCATG+TGG | - | tig0023193:31413-31432 | Msa1406120:intron | 45.0% | |
| TTGGTCCACATGGTCATGAT+CGG | + | tig0023193:31421-31440 | None:intergenic | 45.0% | |
| GTAACAATTGGTCAGGTTCG+AGG | - | tig0023193:32504-32523 | Msa1406120:intron | 45.0% | |
| GCTCATCAACCTACATCATC+CGG | - | tig0023193:32529-32548 | Msa1406120:intron | 45.0% | |
| TCTCAACAACCGGATGATGT+AGG | + | tig0023193:32541-32560 | None:intergenic | 45.0% | |
| TGTCTCCTGCACACAATCTA+AGG | - | tig0023193:33393-33412 | Msa1406120:intron | 45.0% | |
| ATCTGCCTTAGATTGTGTGC+AGG | + | tig0023193:33401-33420 | None:intergenic | 45.0% | |
| ! | CACACAATCTAAGGCAGATC+TGG | - | tig0023193:33402-33421 | Msa1406120:intron | 45.0% |
| ! | GGTGTTATGCCATGTGTCAT+GGG | + | tig0023193:33668-33687 | None:intergenic | 45.0% |
| !! | TGGTGTTATGCCATGTGTCA+TGG | + | tig0023193:33669-33688 | None:intergenic | 45.0% |
| ! | AGCAGTTGTAGGGTGTTCAA+TGG | + | tig0023193:33689-33708 | None:intergenic | 45.0% |
| GGGCTCATATAGCAGTTGTA+GGG | + | tig0023193:33699-33718 | None:intergenic | 45.0% | |
| TGGGCTCATATAGCAGTTGT+AGG | + | tig0023193:33700-33719 | None:intergenic | 45.0% | |
| AGTACCCCTAAAGCTAGATG+AGG | + | tig0023193:34123-34142 | None:intergenic | 45.0% | |
| TGTATTCTCTAAGCCTCAGC+AGG | + | tig0023193:34209-34228 | None:intergenic | 45.0% | |
| TCTCACAAGATTGTGAGGAG+TGG | - | tig0023193:34307-34326 | Msa1406120:intron | 45.0% | |
| ! | GGCAGTTCCTAGAGTTTTAC+GGG | + | tig0023193:34694-34713 | None:intergenic | 45.0% |
| ! | GGGCAGTTCCTAGAGTTTTA+CGG | + | tig0023193:34695-34714 | None:intergenic | 45.0% |
| ! | TAAAACTCTAGGAACTGCCC+TGG | - | tig0023193:34695-34714 | Msa1406120:intron | 45.0% |
| TGCCAGTTCCAGATAGAAAC+TGG | - | tig0023193:35286-35305 | Msa1406120:intron | 45.0% | |
| !! | AGTGAGGCTTTAAAACGAGG+AGG | + | tig0023193:35414-35433 | None:intergenic | 45.0% |
| AAGACATTTGATCCACCACC+TGG | - | tig0023193:35448-35467 | Msa1406120:intron | 45.0% | |
| AGGCTATCAGCATTCTACAG+TGG | + | tig0023193:35842-35861 | None:intergenic | 45.0% | |
| CTATTATCACTAAGGCGCGA+AGG | + | tig0023193:36076-36095 | None:intergenic | 45.0% | |
| AACCAGCAGAAATTGCCTTC+GGG | + | tig0023193:36383-36402 | None:intergenic | 45.0% | |
| TTACGGATTCGATCGCTTTG+AGG | - | tig0023193:36401-36420 | Msa1406120:intron | 45.0% | |
| ! | ACGATAAGGGGGGTTTGTTT+AGG | + | tig0023193:36707-36726 | None:intergenic | 45.0% |
| AAAGGACAGCAACGATAAGG+GGG | + | tig0023193:36718-36737 | None:intergenic | 45.0% | |
| CAAAGGACAGCAACGATAAG+GGG | + | tig0023193:36719-36738 | None:intergenic | 45.0% | |
| CCAAAGGACAGCAACGATAA+GGG | + | tig0023193:36720-36739 | None:intergenic | 45.0% | |
| ACCAAAGGACAGCAACGATA+AGG | + | tig0023193:36721-36740 | None:intergenic | 45.0% | |
| AATCGGCAGATGAGCGTATT+TGG | + | tig0023193:36877-36896 | None:intergenic | 45.0% | |
| CTGAAATTCCTTGGATTCGG+CGG | + | tig0023193:36962-36981 | None:intergenic | 45.0% | |
| AACAACTCGTTCGTTCCCAT+GGG | - | tig0023193:28941-28960 | Msa1406120:intron | 45.0% | |
| ! | AGCCTCTTTTGCTAATCGAC+GGG | + | tig0023193:37557-37576 | None:intergenic | 45.0% |
| ! | GAGCCTCTTTTGCTAATCGA+CGG | + | tig0023193:37558-37577 | None:intergenic | 45.0% |
| ! | TATTGTGTTGGCATGTGCAC+AGG | + | tig0023193:29899-29918 | None:intergenic | 45.0% |
| GTGCACATGCCAACACAATA+TGG | - | tig0023193:29899-29918 | Msa1406120:CDS | 45.0% | |
| CATGCCAACACAATATGGCA+AGG | - | tig0023193:29904-29923 | Msa1406120:CDS | 45.0% | |
| ACCTCCTTGCCATATTGTGT+TGG | + | tig0023193:29911-29930 | None:intergenic | 45.0% | |
| AACTGCCTAATGTGTGTGTC+TGG | - | tig0023193:38147-38166 | Msa1406120:intron | 45.0% | |
| GGATAAGAAGACAGTCCTAG+AGG | + | tig0023193:38357-38376 | None:intergenic | 45.0% | |
| !! | GACTTGTTGAGCTCATCCAA+CGG | + | tig0023193:30391-30410 | None:intergenic | 45.0% |
| !! | TACAAAATAAAAATAAAAAA+TGG | + | tig0023193:29115-29134 | None:intergenic | 5.0% |
| !! | TATAAAAATTATTAGAATTA+AGG | + | tig0023193:31307-31326 | None:intergenic | 5.0% |
| !! | ACATATAATTTATAAAATAA+AGG | + | tig0023193:33212-33231 | None:intergenic | 5.0% |
| !! | TTAAAAAGAATTAAAAAATT+CGG | - | tig0023193:35745-35764 | Msa1406120:intron | 5.0% |
| !! | TACAAAATAAAAATAAAAAA+TGG | + | tig0023193:29115-29134 | None:intergenic | 5.0% |
| GCCAGATGAGCGTATTTGGA+CGG | + | tig0023193:28728-28747 | None:intergenic | 50.0% | |
| !! | CGGAAATTCCTTCGATTCGG+CGG | + | tig0023193:28820-28839 | None:intergenic | 50.0% |
| CAACAACTCGTTCGTTCCCA+TGG | - | tig0023193:28940-28959 | Msa1406120:intron | 50.0% | |
| AGCCTCTTCAGCTAATCGAC+GGG | + | tig0023193:29404-29423 | None:intergenic | 50.0% | |
| GAGCCTCTTCAGCTAATCGA+CGG | + | tig0023193:29405-29424 | None:intergenic | 50.0% | |
| ! | TGCTGCCTCTTTTGCTTTGC+GGG | + | tig0023193:29449-29468 | None:intergenic | 50.0% |
| ! | CTGCTGCCTCTTTTGCTTTG+CGG | + | tig0023193:29450-29469 | None:intergenic | 50.0% |
| ! | GGCATGTGCACAGGTTGAAT+TGG | + | tig0023193:29890-29909 | None:intergenic | 50.0% |
| GCCAACACAATATGGCAAGG+AGG | - | tig0023193:29907-29926 | Msa1406120:intron | 50.0% | |
| CACTAGGCAGTTTCATGAGC+AGG | + | tig0023193:29986-30005 | None:intergenic | 50.0% | |
| CACACACACACACACACACT+AGG | + | tig0023193:30002-30021 | None:intergenic | 50.0% | |
| TGTGTCTGTCTGTCTGTGTC+TGG | - | tig0023193:30046-30065 | Msa1406120:CDS | 50.0% | |
| CACCAAATGGAGAGAGCCTT+AGG | - | tig0023193:30224-30243 | Msa1406120:intron | 50.0% | |
| TGCCTAAGGCTCTCTCCATT+TGG | + | tig0023193:30229-30248 | None:intergenic | 50.0% | |
| GGATAAAGCTGCTGTTCAGG+AGG | - | tig0023193:30432-30451 | Msa1406120:intron | 50.0% | |
| TAAAGCTGCTGTTCAGGAGG+GGG | - | tig0023193:30435-30454 | Msa1406120:intron | 50.0% | |
| TGGCCTAACCTGAGACAGTT+TGG | + | tig0023193:32772-32791 | None:intergenic | 50.0% | |
| AAGAAGGTGAAAGCCTGCTG+AGG | - | tig0023193:34193-34212 | Msa1406120:intron | 50.0% | |
| !! | AGGAGTGGACTAGCTCACAT+TGG | - | tig0023193:34322-34341 | Msa1406120:intron | 50.0% |
| ! | CCTAGAGTTTTACGGGCCTT+AGG | + | tig0023193:34687-34706 | None:intergenic | 50.0% |
| CCTAAGGCCCGTAAAACTCT+AGG | - | tig0023193:34684-34703 | Msa1406120:intron | 50.0% | |
| !! | GAGGCTTTAAAACGAGGAGG+CGG | + | tig0023193:35411-35430 | None:intergenic | 50.0% |
| ACATTTGATCCACCACCTGG+TGG | - | tig0023193:35451-35470 | Msa1406120:intron | 50.0% | |
| ATCCCGAAGGCAATTTCTGC+TGG | - | tig0023193:36378-36397 | Msa1406120:intron | 50.0% | |
| AAGGACAGCAACGATAAGGG+GGG | + | tig0023193:36717-36736 | None:intergenic | 50.0% | |
| CCCTTATCGTTGCTGTCCTT+TGG | - | tig0023193:36717-36736 | Msa1406120:CDS | 50.0% | |
| ! | TTTTGATCTGCGTGCGACAG+TGG | - | tig0023193:36812-36831 | Msa1406120:intron | 50.0% |
| GATCTGCAGCTATGCGATGA+TGG | + | tig0023193:36846-36865 | None:intergenic | 50.0% | |
| CAACAACTCGTTCGTTCCCA+TGG | - | tig0023193:28940-28959 | Msa1406120:intron | 50.0% | |
| AGCCTCTTCTGCTAATCGAC+GGG | + | tig0023193:37503-37522 | None:intergenic | 50.0% | |
| GAGCCTCTTCTGCTAATCGA+CGG | + | tig0023193:37504-37523 | None:intergenic | 50.0% | |
| ! | AGCCCGTCGATTAGCAAAAG+AGG | - | tig0023193:37552-37571 | Msa1406120:intron | 50.0% |
| ! | TGCTGCCTCTTTTGCTTTGC+GGG | + | tig0023193:29449-29468 | None:intergenic | 50.0% |
| ! | CTGCTGCCTCTTTTGCTTTG+CGG | + | tig0023193:29450-29469 | None:intergenic | 50.0% |
| ! | GGCATGTGCACAGGTTGAAT+TGG | + | tig0023193:29890-29909 | None:intergenic | 50.0% |
| GCCAACACAATATGGCAAGG+AGG | - | tig0023193:29907-29926 | Msa1406120:intron | 50.0% | |
| CACCAAATGGAGAGAGCCTT+AGG | - | tig0023193:30224-30243 | Msa1406120:intron | 50.0% | |
| TGCCTAAGGCTCTCTCCATT+TGG | + | tig0023193:30229-30248 | None:intergenic | 50.0% | |
| !! | GCTTTTCAGGAAGGGGCTAT+TGG | - | tig0023193:38543-38562 | Msa1406120:intron | 50.0% |
| GCCGTCCAAATACGCTCATC+TGG | - | tig0023193:28724-28743 | Msa1406120:intron | 55.0% | |
| !! | CTTCGATTCGGCGGAACCTT+AGG | + | tig0023193:28811-28830 | None:intergenic | 55.0% |
| CTAAGGTTCCGCCGAATCGA+AGG | - | tig0023193:28809-28828 | Msa1406120:intron | 55.0% | |
| AACTCGTTCGTTCCCATGGG+TGG | - | tig0023193:28944-28963 | Msa1406120:intron | 55.0% | |
| ! | CTTTTGCTGCCTCCACCCAT+GGG | + | tig0023193:28959-28978 | None:intergenic | 55.0% |
| ! | AGCCCGTCGATTAGCTGAAG+AGG | - | tig0023193:29399-29418 | Msa1406120:intron | 55.0% |
| AGCCTTAGGCAATCCCCTCT+AGG | - | tig0023193:30238-30257 | Msa1406120:intron | 55.0% | |
| GTCCTAGAGGGGATTGCCTA+AGG | + | tig0023193:30243-30262 | None:intergenic | 55.0% | |
| TGTTGAGCTCATCCAACGGC+TGG | + | tig0023193:30387-30406 | None:intergenic | 55.0% | |
| AAAGCTGCTGTTCAGGAGGG+GGG | - | tig0023193:30436-30455 | Msa1406120:intron | 55.0% | |
| AACGAGGAGGCGGAGATCTT+TGG | + | tig0023193:35401-35420 | None:intergenic | 55.0% | |
| TTCTTGCAGAGACCACCAGG+TGG | + | tig0023193:35466-35485 | None:intergenic | 55.0% | |
| TCTCTACTGTAGCGGCTGCT+AGG | + | tig0023193:36310-36329 | None:intergenic | 55.0% | |
| AACTCGTTCGTTCCCATGGG+TGG | - | tig0023193:28944-28963 | Msa1406120:intron | 55.0% | |
| ! | CTTTTGCTGCCTCCACCCAT+GGG | + | tig0023193:28959-28978 | None:intergenic | 55.0% |
| ! | AGCCCGTCGATTAGCAGAAG+AGG | - | tig0023193:37498-37517 | Msa1406120:intron | 55.0% |
| AGCCTTAGGCAATGCCCTCT+AGG | - | tig0023193:38339-38358 | Msa1406120:CDS | 55.0% | |
| !! | GTCCTAGAGGGCATTGCCTA+AGG | + | tig0023193:38344-38363 | None:intergenic | 55.0% |
| TGTTGAGCTCATCCAACGGC+TGG | + | tig0023193:30387-30406 | None:intergenic | 55.0% | |
| TCGTTCGTTCCCATGGGTGG+AGG | - | tig0023193:28947-28966 | Msa1406120:intron | 60.0% | |
| ! | GCTTTTGCTGCCTCCACCCA+TGG | + | tig0023193:28960-28979 | None:intergenic | 60.0% |
| GCAGGCCCGCAAAGCAAAAG+AGG | - | tig0023193:29441-29460 | Msa1406120:CDS | 60.0% | |
| TGGCTGCTGCTGGCATCCAA+GGG | + | tig0023193:30367-30386 | None:intergenic | 60.0% | |
| AAGCTGCTGTTCAGGAGGGG+GGG | - | tig0023193:30437-30456 | Msa1406120:intron | 60.0% | |
| ! | CTGTTCAGGAGGGGGGGTAT+TGG | - | tig0023193:30443-30462 | Msa1406120:intron | 60.0% |
| CTTGTGGGGCCCATGACACA+TGG | - | tig0023193:33656-33675 | Msa1406120:intron | 60.0% | |
| GGAGGCGGAGATCTTTGGCT+TGG | + | tig0023193:35396-35415 | None:intergenic | 60.0% | |
| TTGCAGAGACCACCAGGTGG+TGG | + | tig0023193:35463-35482 | None:intergenic | 60.0% | |
| GGCTTCTTGCAGAGACCACC+AGG | + | tig0023193:35469-35488 | None:intergenic | 60.0% | |
| CTTGGATTCGGCGGAACCCT+AGG | + | tig0023193:36953-36972 | None:intergenic | 60.0% | |
| CTAGGGTTCCGCCGAATCCA+AGG | - | tig0023193:36951-36970 | Msa1406120:intron | 60.0% | |
| TCGTTCGTTCCCATGGGTGG+AGG | - | tig0023193:28947-28966 | Msa1406120:intron | 60.0% | |
| ! | GCTTTTGCTGCCTCCACCCA+TGG | + | tig0023193:28960-28979 | None:intergenic | 60.0% |
| GCAGGCCCGCAAAGCAAAAG+AGG | - | tig0023193:29441-29460 | Msa1406120:CDS | 60.0% | |
| TGGCTGCTGCTGGCATCCAA+GGG | + | tig0023193:30367-30386 | None:intergenic | 60.0% | |
| CTGGCTGCTGCTGGCATCCA+AGG | + | tig0023193:30368-30387 | None:intergenic | 65.0% | |
| ! | ATCCAACGGCTGGCTGCTGC+TGG | + | tig0023193:30377-30396 | None:intergenic | 65.0% |
| CTGGCTGCTGCTGGCATCCA+AGG | + | tig0023193:30368-30387 | None:intergenic | 65.0% | |
| ! | ATCCAACGGCTGGCTGCTGC+TGG | + | tig0023193:30377-30396 | None:intergenic | 65.0% |
| TGCCAGCAGCAGCCAGCCGT+TGG | - | tig0023193:30372-30391 | Msa1406120:intron | 70.0% | |
| TGCCAGCAGCAGCCAGCCGT+TGG | - | tig0023193:30372-30391 | Msa1406120:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0023193 | gene | 28584 | 38584 | 28584 | ID=Msa1406120;Name=Msa1406120 |
| tig0023193 | mRNA | 28584 | 38584 | 28584 | ID=Msa1406120-mRNA-1;Parent=Msa1406120;Name=Msa1406120-mRNA-1;_AED=0.13;_eAED=0.21;_QI=0|0.53|0.42|0.92|0.92|0.92|14|0|499 |
| tig0023193 | exon | 38576 | 38584 | 38576 | ID=Msa1406120-mRNA-1:exon:24443;Parent=Msa1406120-mRNA-1 |
| tig0023193 | exon | 38298 | 38393 | 38298 | ID=Msa1406120-mRNA-1:exon:24442;Parent=Msa1406120-mRNA-1 |
| tig0023193 | exon | 38169 | 38238 | 38169 | ID=Msa1406120-mRNA-1:exon:24441;Parent=Msa1406120-mRNA-1 |
| tig0023193 | exon | 37989 | 38032 | 37989 | ID=Msa1406120-mRNA-1:exon:24440;Parent=Msa1406120-mRNA-1 |
| tig0023193 | exon | 37580 | 37813 | 37580 | ID=Msa1406120-mRNA-1:exon:24439;Parent=Msa1406120-mRNA-1 |
| tig0023193 | exon | 37416 | 37472 | 37416 | ID=Msa1406120-mRNA-1:exon:24438;Parent=Msa1406120-mRNA-1 |
| tig0023193 | exon | 37240 | 37308 | 37240 | ID=Msa1406120-mRNA-1:exon:24437;Parent=Msa1406120-mRNA-1 |
| tig0023193 | exon | 36710 | 36828 | 36710 | ID=Msa1406120-mRNA-1:exon:24436;Parent=Msa1406120-mRNA-1 |
| tig0023193 | exon | 30014 | 30213 | 30014 | ID=Msa1406120-mRNA-1:exon:24435;Parent=Msa1406120-mRNA-1 |
| tig0023193 | exon | 29880 | 29923 | 29880 | ID=Msa1406120-mRNA-1:exon:24434;Parent=Msa1406120-mRNA-1 |
| tig0023193 | exon | 29427 | 29714 | 29427 | ID=Msa1406120-mRNA-1:exon:24433;Parent=Msa1406120-mRNA-1 |
| tig0023193 | exon | 29263 | 29319 | 29263 | ID=Msa1406120-mRNA-1:exon:24432;Parent=Msa1406120-mRNA-1 |
| tig0023193 | exon | 29087 | 29155 | 29087 | ID=Msa1406120-mRNA-1:exon:24431;Parent=Msa1406120-mRNA-1 |
| tig0023193 | exon | 28584 | 28727 | 28584 | ID=Msa1406120-mRNA-1:exon:24430;Parent=Msa1406120-mRNA-1 |
| tig0023193 | CDS | 38576 | 38584 | 38576 | ID=Msa1406120-mRNA-1:cds;Parent=Msa1406120-mRNA-1 |
| tig0023193 | CDS | 38298 | 38393 | 38298 | ID=Msa1406120-mRNA-1:cds;Parent=Msa1406120-mRNA-1 |
| tig0023193 | CDS | 38169 | 38238 | 38169 | ID=Msa1406120-mRNA-1:cds;Parent=Msa1406120-mRNA-1 |
| tig0023193 | CDS | 37989 | 38032 | 37989 | ID=Msa1406120-mRNA-1:cds;Parent=Msa1406120-mRNA-1 |
| tig0023193 | CDS | 37580 | 37813 | 37580 | ID=Msa1406120-mRNA-1:cds;Parent=Msa1406120-mRNA-1 |
| tig0023193 | CDS | 37416 | 37472 | 37416 | ID=Msa1406120-mRNA-1:cds;Parent=Msa1406120-mRNA-1 |
| tig0023193 | CDS | 37240 | 37308 | 37240 | ID=Msa1406120-mRNA-1:cds;Parent=Msa1406120-mRNA-1 |
| tig0023193 | CDS | 36710 | 36828 | 36710 | ID=Msa1406120-mRNA-1:cds;Parent=Msa1406120-mRNA-1 |
| tig0023193 | CDS | 30014 | 30213 | 30014 | ID=Msa1406120-mRNA-1:cds;Parent=Msa1406120-mRNA-1 |
| tig0023193 | CDS | 29880 | 29923 | 29880 | ID=Msa1406120-mRNA-1:cds;Parent=Msa1406120-mRNA-1 |
| tig0023193 | CDS | 29427 | 29714 | 29427 | ID=Msa1406120-mRNA-1:cds;Parent=Msa1406120-mRNA-1 |
| tig0023193 | CDS | 29263 | 29319 | 29263 | ID=Msa1406120-mRNA-1:cds;Parent=Msa1406120-mRNA-1 |
| tig0023193 | CDS | 29087 | 29155 | 29087 | ID=Msa1406120-mRNA-1:cds;Parent=Msa1406120-mRNA-1 |
| tig0023193 | CDS | 28584 | 28727 | 28584 | ID=Msa1406120-mRNA-1:cds;Parent=Msa1406120-mRNA-1 |
| Gene Sequence |
| Protein sequence |
