Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1008020 | XP_003621390.2 | 98.567 | 977 | 14 | 0 | 1 | 977 | 1 | 977 | 0.0 | 1974 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1008020 | sp|Q9LF37|CLPB3_ARATH | 84.463 | 959 | 141 | 4 | 11 | 969 | 12 | 962 | 0.0 | 1648 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1008020 | G7L491 | 98.567 | 977 | 14 | 0 | 1 | 977 | 1 | 977 | 0.0 | 1974 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0479740 | Msa1008020 | 0.801851 | 7.408669e-49 | -8.615850e-47 |
Msa1008020 | Msa1008090 | 0.868257 | 7.469332e-66 | -8.615850e-47 |
Msa1008020 | Msa1466420 | 0.870894 | 1.033312e-66 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1008020 | MtrunA17_Chr7g0218421 | 98.567 | 977 | 14 | 0 | 1 | 977 | 1 | 977 | 0.0 | 1974 |
Msa1008020 | MtrunA17_Chr6g0454071 | 88.462 | 962 | 101 | 4 | 1 | 959 | 1 | 955 | 0.0 | 1727 |
Msa1008020 | MtrunA17_Chr3g0137071 | 72.460 | 886 | 243 | 1 | 77 | 961 | 85 | 970 | 0.0 | 1358 |
Msa1008020 | MtrunA17_Chr4g0061371 | 51.438 | 869 | 394 | 9 | 83 | 939 | 1 | 853 | 0.0 | 873 |
Msa1008020 | MtrunA17_Chr7g0225161 | 49.595 | 865 | 409 | 10 | 86 | 939 | 4 | 852 | 0.0 | 823 |
Msa1008020 | MtrunA17_Chr8g0385811 | 44.406 | 876 | 396 | 13 | 86 | 940 | 97 | 902 | 0.0 | 707 |
Msa1008020 | MtrunA17_Chr3g0134631 | 44.000 | 900 | 411 | 13 | 62 | 940 | 76 | 903 | 0.0 | 706 |
Msa1008020 | MtrunA17_Chr3g0131711 | 44.596 | 879 | 390 | 13 | 86 | 940 | 93 | 898 | 0.0 | 706 |
Msa1008020 | MtrunA17_Chr3g0131351 | 39.684 | 887 | 398 | 18 | 89 | 956 | 194 | 962 | 0.0 | 598 |
Msa1008020 | MtrunA17_Chr2g0329561 | 41.176 | 459 | 256 | 3 | 481 | 939 | 4 | 448 | 7.52e-109 | 345 |
Msa1008020 | MtrunA17_Chr3g0102771 | 48.328 | 329 | 159 | 3 | 617 | 941 | 454 | 775 | 8.45e-102 | 338 |
Msa1008020 | MtrunA17_Chr3g0102771 | 34.228 | 447 | 236 | 10 | 86 | 485 | 3 | 438 | 3.66e-65 | 236 |
Msa1008020 | MtrunA17_Chr3g0135231 | 33.689 | 656 | 327 | 18 | 1 | 636 | 1 | 568 | 9.26e-89 | 297 |
Msa1008020 | MtrunA17_Chr3g0135231 | 44.554 | 101 | 52 | 1 | 759 | 859 | 546 | 642 | 2.23e-16 | 84.0 |
Msa1008020 | MtrunA17_Chr2g0277781 | 47.315 | 298 | 147 | 3 | 625 | 921 | 2 | 290 | 1.77e-85 | 276 |
Msa1008020 | MtrunA17_Chr1g0188061 | 58.763 | 97 | 40 | 0 | 702 | 798 | 221 | 317 | 6.93e-31 | 125 |
Msa1008020 | MtrunA17_Chr7g0260931 | 55.319 | 94 | 42 | 0 | 612 | 705 | 1 | 94 | 3.10e-27 | 106 |
Msa1008020 | MtrunA17_Chr2g0277771 | 33.094 | 139 | 84 | 2 | 802 | 940 | 1 | 130 | 1.34e-21 | 93.2 |
Msa1008020 | MtrunA17_Chr3g0088791 | 60.000 | 50 | 20 | 0 | 117 | 166 | 1 | 50 | 4.25e-14 | 69.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1008020 | AT5G15450.1 | 84.463 | 959 | 141 | 4 | 11 | 969 | 12 | 962 | 0.0 | 1648 |
Msa1008020 | AT2G25140.1 | 70.045 | 888 | 258 | 3 | 77 | 963 | 77 | 957 | 0.0 | 1297 |
Msa1008020 | AT1G74310.1 | 51.792 | 865 | 394 | 7 | 83 | 939 | 1 | 850 | 0.0 | 874 |
Msa1008020 | AT1G74310.2 | 52.479 | 827 | 370 | 7 | 83 | 901 | 1 | 812 | 0.0 | 844 |
Msa1008020 | AT3G48870.2 | 44.521 | 876 | 395 | 12 | 86 | 940 | 85 | 890 | 0.0 | 709 |
Msa1008020 | AT3G48870.1 | 44.521 | 876 | 395 | 12 | 86 | 940 | 116 | 921 | 0.0 | 707 |
Msa1008020 | AT3G48870.4 | 44.521 | 876 | 395 | 12 | 86 | 940 | 116 | 921 | 0.0 | 707 |
Msa1008020 | AT3G48870.3 | 44.521 | 876 | 395 | 12 | 86 | 940 | 116 | 921 | 0.0 | 707 |
Msa1008020 | AT5G50920.1 | 43.891 | 884 | 388 | 14 | 86 | 940 | 96 | 900 | 0.0 | 699 |
Msa1008020 | AT4G14670.1 | 52.305 | 564 | 251 | 5 | 180 | 742 | 76 | 622 | 0.0 | 564 |
Msa1008020 | AT5G51070.1 | 50.000 | 328 | 149 | 2 | 621 | 937 | 594 | 917 | 1.60e-105 | 351 |
Msa1008020 | AT5G51070.1 | 37.552 | 482 | 253 | 10 | 47 | 486 | 43 | 518 | 2.89e-82 | 286 |
Msa1008020 | AT3G45450.1 | 34.006 | 347 | 188 | 8 | 86 | 431 | 3 | 309 | 1.91e-46 | 170 |
Msa1008020 | AT4G30350.1 | 23.088 | 667 | 405 | 22 | 188 | 818 | 141 | 735 | 2.21e-13 | 75.1 |
Find 248 sgRNAs with CRISPR-Local
Find 469 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATGAATCCCCGTATTCTTTC+TGG | 0.132878 | 7_1:+7909218 | None:intergenic |
AGAAAGTTTGTTTGATTTAA+TGG | 0.135817 | 7_1:+7910866 | None:intergenic |
AATTGCTAGCTTCATGTTTA+TGG | 0.140008 | 7_1:-7905540 | Msa1008020:CDS |
ATCCATTACCCGCTGCTTTA+TGG | 0.149238 | 7_1:+7905109 | None:intergenic |
GGGATTGTTCTTTGTTCTTC+TGG | 0.185434 | 7_1:+7908561 | None:intergenic |
GTCTCTCCATCTCTAGTTTC+AGG | 0.249969 | 7_1:+7906287 | None:intergenic |
GGAGAAGTTGTTGTATTTAG+AGG | 0.254015 | 7_1:-7905663 | Msa1008020:CDS |
TCAGTTGAGCACTTGGTTCT+TGG | 0.255582 | 7_1:-7909190 | Msa1008020:CDS |
TCAGCTTATATCCCTTGATA+TGG | 0.263413 | 7_1:-7907688 | Msa1008020:intron |
ACTGGCCTAGCTCCATAGTT+AGG | 0.268814 | 7_1:+7904520 | None:intergenic |
TCATCATCTCTTCCTATAAC+TGG | 0.274586 | 7_1:+7908610 | None:intergenic |
TTCAATGTTGGGGCGCGATT+TGG | 0.285714 | 7_1:-7909269 | Msa1008020:CDS |
TAGTAGCATTGTCCGGTTAC+AGG | 0.286464 | 7_1:-7905003 | Msa1008020:intron |
GATATGGGTGCACTTATTAC+TGG | 0.293322 | 7_1:-7907672 | Msa1008020:CDS |
TTTCAATTATGTTAGGTGAT+AGG | 0.297339 | 7_1:-7909304 | Msa1008020:intron |
GTTTCTTCTGTTGAAGGAAA+TGG | 0.300185 | 7_1:+7910967 | None:intergenic |
CATGCAGTTTCAAGATTGAT+TGG | 0.304691 | 7_1:-7905410 | Msa1008020:CDS |
GGCGGCTGCCAAACTGAAAA+TGG | 0.306116 | 7_1:-7906356 | Msa1008020:CDS |
ATTGCTAGCTTCATGTTTAT+GGG | 0.310962 | 7_1:-7905539 | Msa1008020:CDS |
TCAAATTACAGCTATTGATT+TGG | 0.314843 | 7_1:-7906386 | Msa1008020:intron |
GATGCTGCCATCCAACTTCT+TGG | 0.315240 | 7_1:-7904559 | Msa1008020:CDS |
TACTGACTGGCGTCCCCTAA+TGG | 0.317109 | 7_1:+7909084 | None:intergenic |
AATCTGCAATAGAGTCCATT+AGG | 0.321183 | 7_1:-7909099 | Msa1008020:CDS |
CCGCTGCTTTATGGTTTCAT+AGG | 0.325986 | 7_1:+7905118 | None:intergenic |
TTCAATTATGTTAGGTGATA+GGG | 0.332925 | 7_1:-7909303 | Msa1008020:intron |
TCAATATATTTACAATGCTT+TGG | 0.334451 | 7_1:+7904164 | None:intergenic |
ATCTGCAATAGAGTCCATTA+GGG | 0.339355 | 7_1:-7909098 | Msa1008020:CDS |
CTATTGAGTATATATGAATA+TGG | 0.342790 | 7_1:-7904075 | Msa1008020:three_prime_UTR |
GAATCAGCTGGTTCAATGTT+GGG | 0.347322 | 7_1:-7909280 | Msa1008020:CDS |
GAAGGAAATGGGAGTTGAAT+AGG | 0.348408 | 7_1:+7910979 | None:intergenic |
CAAACAAACTTTCTTGCAAA+TGG | 0.351917 | 7_1:-7910857 | Msa1008020:CDS |
CGTTGTGAAGCTTCTTCAAC+TGG | 0.358044 | 7_1:-7910794 | Msa1008020:CDS |
ATCTAGTATGCTGAGAAATA+TGG | 0.364021 | 7_1:+7904264 | None:intergenic |
GGAAAGCTTGATCCAGTTAT+AGG | 0.365678 | 7_1:-7908622 | Msa1008020:CDS |
TTCCATCATCTAAAATTTGA+AGG | 0.372126 | 7_1:+7905261 | None:intergenic |
GCATTTGATGAAGGCTTTGT+TGG | 0.376631 | 7_1:-7909867 | Msa1008020:CDS |
AGCACTGTTTCTTCTGTTGA+AGG | 0.380917 | 7_1:+7910961 | None:intergenic |
GAAGCTTCTTCAACTGGAAC+TGG | 0.384641 | 7_1:-7910788 | Msa1008020:CDS |
ATGAGATTCATACAGTTGTT+GGG | 0.390769 | 7_1:-7907560 | Msa1008020:CDS |
AAGATACCATTTCAATACTA+AGG | 0.391110 | 7_1:-7907084 | Msa1008020:CDS |
TTTCTTCTGTTGAAGGAAAT+GGG | 0.395933 | 7_1:+7910968 | None:intergenic |
GTTTCATAGGCTAATTCCTT+AGG | 0.399438 | 7_1:+7905131 | None:intergenic |
CGTGCTGCTGAATTAAAGTA+TGG | 0.399770 | 7_1:-7905854 | Msa1008020:CDS |
CGCAGGATCTTTACCAAGGT+TGG | 0.401353 | 7_1:-7909824 | Msa1008020:CDS |
CCATCACTGAACTGAATTGA+AGG | 0.401590 | 7_1:+7911026 | None:intergenic |
TTAAACAAGTTACCTTTGTC+AGG | 0.403747 | 7_1:+7906956 | None:intergenic |
AATGCTTCATACTTCCCTTC+AGG | 0.404209 | 7_1:+7908685 | None:intergenic |
ATGCAGTTTCAAGATTGATT+GGG | 0.406838 | 7_1:-7905409 | Msa1008020:CDS |
CAGCTTATATCCCTTGATAT+GGG | 0.407406 | 7_1:-7907687 | Msa1008020:CDS |
AATGTTGGGGCGCGATTTGG+AGG | 0.408644 | 7_1:-7909266 | Msa1008020:CDS |
ATGCTAAGAGAAGAAGTAAC+CGG | 0.410050 | 7_1:-7905755 | Msa1008020:CDS |
ATTTGTTTCAGTTGAGCACT+TGG | 0.413239 | 7_1:-7909197 | Msa1008020:CDS |
GATGAGATTCATACAGTTGT+TGG | 0.413936 | 7_1:-7907561 | Msa1008020:CDS |
TTTATCCAGGACCAACGATT+CGG | 0.419513 | 7_1:-7909166 | Msa1008020:CDS |
GCAGTAGAAAGCATTCATTC+AGG | 0.419600 | 7_1:+7904288 | None:intergenic |
CAGATAAGGCTTCTAAAGAT+AGG | 0.420313 | 7_1:-7906246 | Msa1008020:CDS |
ATCCTAAGCTTCCAAGAAGT+TGG | 0.422927 | 7_1:+7904548 | None:intergenic |
TATTCGTATTAATCAATAGA+TGG | 0.426435 | 7_1:+7904217 | None:intergenic |
GGAATCAGCTGGTTCAATGT+TGG | 0.434701 | 7_1:-7909281 | Msa1008020:CDS |
TTTGATCACGGTCGAGAGGC+TGG | 0.435919 | 7_1:+7905027 | None:intergenic |
TTAGGATATGACCCTAACTA+TGG | 0.439348 | 7_1:-7904532 | Msa1008020:CDS |
TTGCTGTGGAAGTTGATTGT+TGG | 0.442232 | 7_1:+7904387 | None:intergenic |
TTCATGTTTATGGGGCCTAC+AGG | 0.444724 | 7_1:-7905530 | Msa1008020:CDS |
ATCCAACTTCTTGGAAGCTT+AGG | 0.446196 | 7_1:-7904550 | Msa1008020:CDS |
TTATCCAGGACCAACGATTC+GGG | 0.446951 | 7_1:-7909165 | Msa1008020:CDS |
ACTCAATAGTAATATTATCA+TGG | 0.447655 | 7_1:+7904089 | None:intergenic |
AGTGTTGTCCACTCCAACCT+TGG | 0.448322 | 7_1:+7909811 | None:intergenic |
AGGGATTGATTCAGAGAGCC+AGG | 0.449669 | 7_1:-7909246 | Msa1008020:CDS |
GTTGGCCAACATAAACTTGT+TGG | 0.450073 | 7_1:+7907116 | None:intergenic |
AACCATAAAGCAGCGGGTAA+TGG | 0.450765 | 7_1:-7905111 | Msa1008020:CDS |
CCTTCAATTCAGTTCAGTGA+TGG | 0.452516 | 7_1:-7911026 | Msa1008020:exon |
CAAGTGCACTATCAGAAATT+CGG | 0.455304 | 7_1:+7907026 | None:intergenic |
TCAAACAAAATAACAGCATA+AGG | 0.456649 | 7_1:+7905323 | None:intergenic |
CAGTCCCCTTAGTATTGAAA+TGG | 0.458099 | 7_1:+7907078 | None:intergenic |
CATAAACTCGGGGCGAAAGA+TGG | 0.462970 | 7_1:+7905076 | None:intergenic |
ATCTACACCGCAAGAAAGCC+TGG | 0.463020 | 7_1:-7904329 | Msa1008020:CDS |
TATGAATCTCATCAATGAAA+AGG | 0.463311 | 7_1:+7907571 | None:intergenic |
ATAAACATGAAGCTAGCAAT+TGG | 0.464537 | 7_1:+7905542 | None:intergenic |
GTACTTCATAAGCGTGTTGT+AGG | 0.464753 | 7_1:-7905638 | Msa1008020:CDS |
TTTGAGTGAAACGCGTTTGG+CGG | 0.465591 | 7_1:+7910898 | None:intergenic |
AGCCTCGGCTACTGCTTTAA+CGG | 0.470021 | 7_1:+7905604 | None:intergenic |
AAGAACAATCCCGTGCTGAT+TGG | 0.472297 | 7_1:-7908550 | Msa1008020:CDS |
CGCATGTTAGGTGCTACAAA+TGG | 0.473383 | 7_1:-7907265 | Msa1008020:intron |
AGGGACTTCCAGAAAGAATA+CGG | 0.476681 | 7_1:-7909226 | Msa1008020:CDS |
TGATTTGAGTGAAACGCGTT+TGG | 0.477017 | 7_1:+7910895 | None:intergenic |
TTAGATGAATATATGAACTC+TGG | 0.478286 | 7_1:-7905785 | Msa1008020:CDS |
GTTTGCGTTAATACTGAGAA+AGG | 0.481882 | 7_1:+7911116 | None:intergenic |
GGAGTGAAGTTACCTGTAAC+CGG | 0.483592 | 7_1:+7904991 | None:intergenic |
TTATTACTGGAGCAAAATAC+CGG | 0.483888 | 7_1:-7907659 | Msa1008020:CDS |
ACCGGGGAGAATTCGAAGAT+AGG | 0.484794 | 7_1:-7907641 | Msa1008020:CDS |
GTTCACAGAGATGGCATGGC+AGG | 0.485303 | 7_1:-7909948 | Msa1008020:CDS |
TAATAAGTGCACCCATATCA+AGG | 0.485473 | 7_1:+7907676 | None:intergenic |
ATCATTATGACCTCAAATGT+TGG | 0.489004 | 7_1:-7905191 | Msa1008020:CDS |
CTCTCGGATCGATATATTAG+TGG | 0.490097 | 7_1:-7906989 | Msa1008020:CDS |
AGATTGATTGGGGCACCACC+TGG | 0.490582 | 7_1:-7905398 | Msa1008020:CDS |
TGGAAACGACGCTCTAGTGC+TGG | 0.490765 | 7_1:+7907136 | None:intergenic |
CTGCACTTGATGAGATCAAC+CGG | 0.491334 | 7_1:-7906315 | Msa1008020:CDS |
AGGTCTGCGGCGAACTGTCT+CGG | 0.491652 | 7_1:+7905343 | None:intergenic |
CCCGTGCTGATTGGTGAGCC+TGG | 0.493530 | 7_1:-7908541 | Msa1008020:CDS |
TTCAATACTAAGGGGACTGC+GGG | 0.494187 | 7_1:-7907074 | Msa1008020:CDS |
GCTTCCCGAATCGTTGGTCC+TGG | 0.496949 | 7_1:+7909161 | None:intergenic |
GGGGCACCACCTGGATATGT+TGG | 0.499520 | 7_1:-7905389 | Msa1008020:CDS |
TCTTCGTACCCAACATATCC+AGG | 0.500478 | 7_1:+7905380 | None:intergenic |
GTTGTCGTTGCAATGAGTTA+AGG | 0.500716 | 7_1:+7905828 | None:intergenic |
GGCTGAGCTCACTGAACAGT+GGG | 0.501295 | 7_1:-7906179 | Msa1008020:CDS |
AGAGGAGAGCTGCGATGCAT+TGG | 0.501429 | 7_1:-7907202 | Msa1008020:CDS |
TTGTTCTCTTTCGCCACCTC+CGG | 0.501954 | 7_1:+7909911 | None:intergenic |
GCTTTGTTGGAGCAAAAGAA+TGG | 0.504323 | 7_1:-7909854 | Msa1008020:CDS |
AATTGATATGAGTGAGTACA+TGG | 0.507053 | 7_1:-7905438 | Msa1008020:CDS |
TTCTCCTCTCAGAATACCCT+TGG | 0.507087 | 7_1:+7904459 | None:intergenic |
AAGGAAATGGGAGTTGAATA+GGG | 0.507263 | 7_1:+7910980 | None:intergenic |
AGCTATTGATTTGGTTGATG+AGG | 0.507929 | 7_1:-7906377 | Msa1008020:CDS |
GCTATCCAACGTTCAAGAGC+AGG | 0.508885 | 7_1:-7905584 | Msa1008020:CDS |
ATCAAATTAGTAGCATTGTC+CGG | 0.508919 | 7_1:-7905010 | Msa1008020:CDS |
AAAAGAATGGTCTTGCTCGC+AGG | 0.510038 | 7_1:-7909841 | Msa1008020:CDS |
GGAGACAGAGCATTTGATGA+AGG | 0.510818 | 7_1:-7909876 | Msa1008020:CDS |
TACTAAGGGGACTGCGGGAA+AGG | 0.511273 | 7_1:-7907069 | Msa1008020:CDS |
TGAAGGGAAGTATGAAGCAT+TGG | 0.512318 | 7_1:-7908683 | Msa1008020:CDS |
GGGCACCACCTGGATATGTT+GGG | 0.512796 | 7_1:-7905388 | Msa1008020:CDS |
ATTCATACAGTTGTTGGGGC+AGG | 0.513625 | 7_1:-7907555 | Msa1008020:intron |
CGTTTCCAACAAGTTTATGT+TGG | 0.516006 | 7_1:-7907121 | Msa1008020:CDS |
GGATGGCAGCATCTGTCACC+TGG | 0.517832 | 7_1:+7904569 | None:intergenic |
AGATCGCAAGATGAAAATCC+AGG | 0.518725 | 7_1:-7904587 | Msa1008020:CDS |
TTGCTAGCTTCATGTTTATG+GGG | 0.518821 | 7_1:-7905538 | Msa1008020:CDS |
CTGGCCTAGCTCCATAGTTA+GGG | 0.521595 | 7_1:+7904521 | None:intergenic |
GGTCATAATGATAACAGTAT+TGG | 0.522391 | 7_1:+7905202 | None:intergenic |
GTATTCTTTCTGGAAGTCCC+TGG | 0.524762 | 7_1:+7909228 | None:intergenic |
TCGGCTACTGCTTTAACGGC+AGG | 0.531031 | 7_1:+7905608 | None:intergenic |
CTCAATAGTAATATTATCAT+GGG | 0.531235 | 7_1:+7904090 | None:intergenic |
AATTTCAGCAATATCACTCC+CGG | 0.532200 | 7_1:+7905736 | None:intergenic |
AAGCTTGTGAAGAATGCTCC+AGG | 0.535011 | 7_1:+7904311 | None:intergenic |
TACCTTGGTCAATTACTGAC+TGG | 0.535710 | 7_1:+7909071 | None:intergenic |
TCAACTCTATTCATAAACTC+GGG | 0.537745 | 7_1:+7905065 | None:intergenic |
AGATACCATTTCAATACTAA+GGG | 0.538230 | 7_1:-7907083 | Msa1008020:CDS |
GATAGTTTCATCGCCGGAGG+TGG | 0.538590 | 7_1:-7909924 | Msa1008020:CDS |
AATTTCTGATAGTGCACTTG+TGG | 0.540294 | 7_1:-7907023 | Msa1008020:CDS |
CATACTCTCGCTCAGCCTGT+TGG | 0.540749 | 7_1:+7905885 | None:intergenic |
TGGAAGAGTAACTGACTCAC+AGG | 0.542940 | 7_1:-7905243 | Msa1008020:CDS |
GCCTATCTTCGAATTCTCCC+CGG | 0.544146 | 7_1:+7907640 | None:intergenic |
GAAATGGTATCTTCAACAGT+AGG | 0.545265 | 7_1:+7907094 | None:intergenic |
GGATGATGACACAGCACCTA+AGG | 0.546384 | 7_1:-7905147 | Msa1008020:CDS |
TTGCTGAAATTGTAAGCAAG+TGG | 0.546977 | 7_1:-7905724 | Msa1008020:CDS |
TAGATGAATATATGAACTCT+GGG | 0.548569 | 7_1:-7905784 | Msa1008020:CDS |
TCAATTATGTTAGGTGATAG+GGG | 0.550533 | 7_1:-7909302 | Msa1008020:intron |
TGGGAAAGATTTGACAGCAA+TGG | 0.550905 | 7_1:-7908653 | Msa1008020:CDS |
CTATGAAACCATAAAGCAGC+GGG | 0.552881 | 7_1:-7905117 | Msa1008020:CDS |
TCTTGAACGTTGGATAGCCT+CGG | 0.554206 | 7_1:+7905589 | None:intergenic |
AAGAGTTCACAGAGATGGCA+TGG | 0.554283 | 7_1:-7909952 | Msa1008020:CDS |
TGCAGTTTCAAGATTGATTG+GGG | 0.555464 | 7_1:-7905408 | Msa1008020:CDS |
ACAAATGGTGCTATGGATGC+TGG | 0.556016 | 7_1:-7907250 | Msa1008020:CDS |
CTGATTGGTGAGCCTGGTGT+TGG | 0.556965 | 7_1:-7908535 | Msa1008020:CDS |
TTTATGGGGCCTACAGGTGT+AGG | 0.558111 | 7_1:-7905524 | Msa1008020:CDS |
AGAGTTGCTTCCCGAATCGT+TGG | 0.558606 | 7_1:+7909155 | None:intergenic |
AGTGAACGTTGAGATCCAAC+AGG | 0.559442 | 7_1:-7905900 | Msa1008020:CDS |
CAACAACACTTGATGAGTAT+CGG | 0.559927 | 7_1:-7907177 | Msa1008020:CDS |
AGCTCTCCTCTTCCGAGCAT+AGG | 0.561542 | 7_1:+7907214 | None:intergenic |
GTTCGTTTAGTCAATTCTGA+AGG | 0.562174 | 7_1:+7904112 | None:intergenic |
GATCTTTACCAAGGTTGGAG+TGG | 0.562623 | 7_1:-7909819 | Msa1008020:CDS |
AAAGACCTGCTCTTGAACGT+TGG | 0.563977 | 7_1:+7905579 | None:intergenic |
CAAAACTTCAACAATCAGAG+AGG | 0.565499 | 7_1:-7905685 | Msa1008020:CDS |
ATCAACTCTATTCATAAACT+CGG | 0.565760 | 7_1:+7905064 | None:intergenic |
GTACTGCGATCCAACATTTG+AGG | 0.565812 | 7_1:+7905181 | None:intergenic |
TTAAAGCCTATGCTCGGAAG+AGG | 0.566589 | 7_1:-7907220 | Msa1008020:CDS |
TGTGGAAGCTGCAATTCTCT+CGG | 0.566711 | 7_1:-7907005 | Msa1008020:CDS |
TTTGTTTGATGAGATTGAGA+AGG | 0.567295 | 7_1:-7905309 | Msa1008020:CDS |
ATATTTGTTATAGATCCTGA+AGG | 0.568016 | 7_1:-7908700 | Msa1008020:intron |
GTTCATTCAGCGGCAACCCA+AGG | 0.570005 | 7_1:-7909765 | Msa1008020:intron |
TTGACAGCAATGGCTAAAGC+AGG | 0.570459 | 7_1:-7908643 | Msa1008020:CDS |
GAAAGGTATGAGCTACATCA+TGG | 0.572182 | 7_1:-7907052 | Msa1008020:CDS |
GGGACTTCCAGAAAGAATAC+GGG | 0.572701 | 7_1:-7909225 | Msa1008020:CDS |
TGTGGAGAATGAACTTGCCA+AGG | 0.574061 | 7_1:-7904476 | Msa1008020:CDS |
AGAGAACAAGCATCAGATTG+TGG | 0.577681 | 7_1:-7909897 | Msa1008020:CDS |
CTTCTTCAACTGGAACTGGA+AGG | 0.578359 | 7_1:-7910784 | Msa1008020:CDS |
GAAAAGGATAGTTTGACCAT+CGG | 0.578753 | 7_1:+7907587 | None:intergenic |
AATCAGCTGGTTCAATGTTG+GGG | 0.578949 | 7_1:-7909279 | Msa1008020:CDS |
CTCAAGCTTTGATGAACCGT+AGG | 0.580457 | 7_1:-7907925 | Msa1008020:CDS |
ATGTTGGGGCGCGATTTGGA+GGG | 0.583323 | 7_1:-7909265 | Msa1008020:CDS |
GGAAAGACTGCAATTTCTGA+AGG | 0.583458 | 7_1:-7908514 | Msa1008020:CDS |
TTGATCTCATCAAGTGCAGT+AGG | 0.585262 | 7_1:+7906319 | None:intergenic |
TGAGATTCATACAGTTGTTG+GGG | 0.588813 | 7_1:-7907559 | Msa1008020:CDS |
TCTCACGAATGATACAGATA+AGG | 0.588906 | 7_1:-7906260 | Msa1008020:CDS |
ACAATGCTTTGGAGTGACAA+AGG | 0.588994 | 7_1:+7904175 | None:intergenic |
TCTCTAGTTTCAGGACCGAC+CGG | 0.591761 | 7_1:+7906296 | None:intergenic |
AAAACTTCAACAATCAGAGA+GGG | 0.591945 | 7_1:-7905684 | Msa1008020:CDS |
GAGAGGAGAATTTAAAGATG+AGG | 0.592198 | 7_1:-7904446 | Msa1008020:CDS |
TGCTCGCAGGATCTTTACCA+AGG | 0.592880 | 7_1:-7909828 | Msa1008020:CDS |
ATTGCAGTCTTTCCAACACC+AGG | 0.594268 | 7_1:+7908523 | None:intergenic |
ATGACCCTAACTATGGAGCT+AGG | 0.595289 | 7_1:-7904525 | Msa1008020:CDS |
AAGAGTGATTCAGCAAAATG+TGG | 0.597514 | 7_1:-7904494 | Msa1008020:CDS |
GGATATGTTGGGTACGAAGA+GGG | 0.597925 | 7_1:-7905377 | Msa1008020:CDS |
GAATGCTCCAGGCTTTCTTG+CGG | 0.598691 | 7_1:+7904322 | None:intergenic |
AATCTCTTAAAGCCTATGCT+CGG | 0.599174 | 7_1:-7907226 | Msa1008020:CDS |
TTCTTCAACTGGAACTGGAA+GGG | 0.599932 | 7_1:-7910783 | Msa1008020:intron |
TCAAGCTTTGATGAACCGTA+GGG | 0.601780 | 7_1:-7907924 | Msa1008020:intron |
ACCAGGCTCACCAATCAGCA+CGG | 0.601973 | 7_1:+7908540 | None:intergenic |
AGGTGCTACAAATGGTGCTA+TGG | 0.604860 | 7_1:-7907257 | Msa1008020:CDS |
TAAGCTTCCAAGAAGTTGGA+TGG | 0.608541 | 7_1:+7904552 | None:intergenic |
CCAGGCTCACCAATCAGCAC+GGG | 0.614081 | 7_1:+7908541 | None:intergenic |
GGCGATAGTTTCATCGCCGG+AGG | 0.615791 | 7_1:-7909927 | Msa1008020:CDS |
CTAATTTGATCACGGTCGAG+AGG | 0.615964 | 7_1:+7905023 | None:intergenic |
AATAAGTGCACCCATATCAA+GGG | 0.616830 | 7_1:+7907677 | None:intergenic |
GAAATTGTAAGCAAGTGGAC+CGG | 0.621826 | 7_1:-7905719 | Msa1008020:CDS |
TGCTAAGAGAAGAAGTAACC+GGG | 0.623358 | 7_1:-7905754 | Msa1008020:CDS |
ACAGCAAGAGTTCACAGAGA+TGG | 0.624210 | 7_1:-7909957 | Msa1008020:CDS |
CTACGGTTCATCAAAGCTTG+AGG | 0.625656 | 7_1:+7907926 | None:intergenic |
TATTACTGGAGCAAAATACC+GGG | 0.626157 | 7_1:-7907658 | Msa1008020:CDS |
TGGTATCTTCAACAGTAGGT+TGG | 0.626329 | 7_1:+7907098 | None:intergenic |
GTCGGTCCTGAAACTAGAGA+TGG | 0.626715 | 7_1:-7906293 | Msa1008020:CDS |
TATTGATTTGGTTGATGAGG+CGG | 0.632745 | 7_1:-7906374 | Msa1008020:CDS |
GAAAGACTGCAATTTCTGAA+GGG | 0.637681 | 7_1:-7908513 | Msa1008020:intron |
GCAGGCGATAGTTTCATCGC+CGG | 0.641859 | 7_1:-7909930 | Msa1008020:CDS |
TCGACTTCAATCAATCAAAG+AGG | 0.642516 | 7_1:-7906134 | Msa1008020:CDS |
TGGATATGTTGGGTACGAAG+AGG | 0.643408 | 7_1:-7905378 | Msa1008020:CDS |
TATTTGTTATAGATCCTGAA+GGG | 0.643519 | 7_1:-7908699 | Msa1008020:intron |
TTCTTCTGTATTGAACATGT+AGG | 0.647488 | 7_1:+7905472 | None:intergenic |
ACATGAAGCTAGCAATTGGA+CGG | 0.647724 | 7_1:+7905546 | None:intergenic |
AGGCTGAGCTCACTGAACAG+TGG | 0.649031 | 7_1:-7906180 | Msa1008020:CDS |
GGGATTGATTCAGAGAGCCA+GGG | 0.649232 | 7_1:-7909245 | Msa1008020:CDS |
AGATAGGTTAAATCGTCTTG+AGG | 0.650620 | 7_1:-7906230 | Msa1008020:CDS |
CAATGCTACTAATTTGATCA+CGG | 0.650855 | 7_1:+7905015 | None:intergenic |
GTGGAGAATGAACTTGCCAA+GGG | 0.652332 | 7_1:-7904475 | Msa1008020:CDS |
CATACTTTAATTCAGCAGCA+CGG | 0.653852 | 7_1:+7905855 | None:intergenic |
ACTTCAATCAATCAAAGAGG+AGG | 0.655489 | 7_1:-7906131 | Msa1008020:intron |
TTTCAATACTAAGGGGACTG+CGG | 0.656692 | 7_1:-7907075 | Msa1008020:CDS |
CAACTCTATTCATAAACTCG+GGG | 0.656776 | 7_1:+7905066 | None:intergenic |
GTATCGGAAGTATATCGAGA+AGG | 0.658772 | 7_1:-7907161 | Msa1008020:CDS |
AAGCTAGCAATTGGACGGTG+AGG | 0.661577 | 7_1:+7905551 | None:intergenic |
TGCCGTTAAAGCAGTAGCCG+AGG | 0.661781 | 7_1:-7905606 | Msa1008020:CDS |
GCAACGACAACTTGAGAGTG+CGG | 0.664276 | 7_1:-7905816 | Msa1008020:CDS |
CGCCAGTCAGTAATTGACCA+AGG | 0.667722 | 7_1:-7909073 | Msa1008020:intron |
AAATAACAGCATAAGGTCTG+CGG | 0.670615 | 7_1:+7905330 | None:intergenic |
AAAGAAGTAACAGAATCCGA+TGG | 0.671332 | 7_1:-7907603 | Msa1008020:CDS |
TAGGTGATAGGGGAATCAGC+TGG | 0.680311 | 7_1:-7909292 | Msa1008020:CDS |
GAAGAGATGATGAAATACGC+AGG | 0.680478 | 7_1:-7908600 | Msa1008020:CDS |
CTTGCCAAGGGTATTCTGAG+AGG | 0.680794 | 7_1:-7904463 | Msa1008020:CDS |
CGGAGAAAGAGAGAGAAACA+CGG | 0.683168 | 7_1:+7910918 | None:intergenic |
GATACCATTTCAATACTAAG+GGG | 0.685009 | 7_1:-7907082 | Msa1008020:CDS |
CTTGCTCAGAGAATCGTGCA+AGG | 0.687496 | 7_1:-7907956 | Msa1008020:CDS |
TATGTTGGGTACGAAGAGGG+AGG | 0.694237 | 7_1:-7905374 | Msa1008020:CDS |
CTACTGATAAGTTCATTCAG+CGG | 0.698888 | 7_1:-7909775 | Msa1008020:CDS |
ATCGCAGTACATTCTAAACA+CGG | 0.699680 | 7_1:-7905168 | Msa1008020:CDS |
ACTTGATGAGATCAACCGGT+CGG | 0.702875 | 7_1:-7906311 | Msa1008020:CDS |
CCTATGAAACCATAAAGCAG+CGG | 0.709298 | 7_1:-7905118 | Msa1008020:CDS |
GGAAGAGTAACTGACTCACA+GGG | 0.729785 | 7_1:-7905242 | Msa1008020:CDS |
GGACTTCCAGAAAGAATACG+GGG | 0.738647 | 7_1:-7909224 | Msa1008020:CDS |
TCTGCAATAGAGTCCATTAG+GGG | 0.738890 | 7_1:-7909097 | Msa1008020:CDS |
ATTACTGGAGCAAAATACCG+GGG | 0.760642 | 7_1:-7907657 | Msa1008020:CDS |
TCGTACCCAACATATCCAGG+TGG | 0.765588 | 7_1:+7905383 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTATTAATTATTAATTGTGT+CGG | - | chr7_1:7904553-7904572 | Msa1008020:CDS | 10.0% |
!! | AGCTTATTAAAAAAAAAAAA+TGG | + | chr7_1:7904903-7904922 | None:intergenic | 10.0% |
!!! | CTAATTTTAATTTCAATTTT+AGG | - | chr7_1:7907420-7907439 | Msa1008020:intron | 10.0% |
!! | TAATTGAAACTTAATTAATT+AGG | - | chr7_1:7909214-7909233 | Msa1008020:CDS | 10.0% |
!!! | AATGAATTTTTATTGATTAA+TGG | - | chr7_1:7909238-7909257 | Msa1008020:CDS | 10.0% |
!! | TATATCAAAATTATGAATAT+CGG | - | chr7_1:7910313-7910332 | Msa1008020:intron | 10.0% |
!! | ACAACAAATTTATTGAATAA+TGG | - | chr7_1:7904862-7904881 | Msa1008020:intron | 15.0% |
!!! | AATTTTAAATTATCTAAACC+TGG | - | chr7_1:7906936-7906955 | Msa1008020:intron | 15.0% |
!! | TATCTGTTAAAAATATGAAA+TGG | - | chr7_1:7907037-7907056 | Msa1008020:CDS | 15.0% |
!! | ATCTGTTAAAAATATGAAAT+GGG | - | chr7_1:7907038-7907057 | Msa1008020:CDS | 15.0% |
!! | AATTGAAATTAAAATTAGAC+TGG | + | chr7_1:7907418-7907437 | None:intergenic | 15.0% |
!!! | GTTACTTTATAAATTCTATT+AGG | + | chr7_1:7907888-7907907 | None:intergenic | 15.0% |
!! | AATTTGATATTAATGAAAAC+TGG | - | chr7_1:7908351-7908370 | Msa1008020:intron | 15.0% |
!!! | ACTTTTTTTTTTAATACTGA+AGG | - | chr7_1:7909114-7909133 | Msa1008020:CDS | 15.0% |
!!! | AATTTTTATTGATTAATGGT+CGG | - | chr7_1:7909242-7909261 | Msa1008020:CDS | 15.0% |
!!! | TTGATCAAATTTTTGAAAAA+TGG | + | chr7_1:7910256-7910275 | None:intergenic | 15.0% |
!!! | TTTTAAAAAAAAGTTCATGA+AGG | + | chr7_1:7910472-7910491 | None:intergenic | 15.0% |
!! | AATAAAATGTAGAAAAAGAT+AGG | + | chr7_1:7910572-7910591 | None:intergenic | 15.0% |
!!! | AGAAAGTTTGTTTGATTTAA+TGG | + | chr7_1:7904346-7904365 | None:intergenic | 20.0% |
!! | AATAGAAGCAATTAAACTTT+GGG | - | chr7_1:7904696-7904715 | Msa1008020:intron | 20.0% |
!!! | TTGAATGCTTAATTTTTTAC+TGG | + | chr7_1:7905053-7905072 | None:intergenic | 20.0% |
!! | ATTAAGTTATTTATCCAAAC+AGG | + | chr7_1:7905590-7905609 | None:intergenic | 20.0% |
!!! | GAAATTTAGAATGAAACAAA+TGG | + | chr7_1:7906174-7906193 | None:intergenic | 20.0% |
!! | TTAAAAGACTTAGATATCTT+TGG | - | chr7_1:7906229-7906248 | Msa1008020:CDS | 20.0% |
!! | TAAAAGACTTAGATATCTTT+GGG | - | chr7_1:7906230-7906249 | Msa1008020:CDS | 20.0% |
!!! | AGAATTTGAACAATTTGTTT+TGG | - | chr7_1:7906391-7906410 | Msa1008020:intron | 20.0% |
!! | TTGTTCTGTTAAAATCATAT+TGG | - | chr7_1:7906787-7906806 | Msa1008020:intron | 20.0% |
!! | ACATAATTATATAACCTGTT+TGG | + | chr7_1:7907115-7907134 | None:intergenic | 20.0% |
!! | ATTGAAATTAAAACTTCTGA+AGG | + | chr7_1:7907479-7907498 | None:intergenic | 20.0% |
!!! | ATTTTCAGATATCTGATTTT+GGG | - | chr7_1:7907702-7907721 | Msa1008020:intron | 20.0% |
!! | AGTTTATTTACCAAAAATGT+CGG | - | chr7_1:7907769-7907788 | Msa1008020:intron | 20.0% |
!!! | AAATTAGTTTATTTGCCAAA+AGG | - | chr7_1:7907808-7907827 | Msa1008020:intron | 20.0% |
!!! | CAAATTTTTGAAAAATGGAA+AGG | + | chr7_1:7910251-7910270 | None:intergenic | 20.0% |
!! | GACAATCAATATGTATATAT+TGG | + | chr7_1:7910281-7910300 | None:intergenic | 20.0% |
!! | TATTCGTATTAATCAATAGA+TGG | + | chr7_1:7910995-7911014 | None:intergenic | 20.0% |
!! | TCAATATATTTACAATGCTT+TGG | + | chr7_1:7911048-7911067 | None:intergenic | 20.0% |
!! | CTCAATAGTAATATTATCAT+GGG | + | chr7_1:7911122-7911141 | None:intergenic | 20.0% |
!! | ACTCAATAGTAATATTATCA+TGG | + | chr7_1:7911123-7911142 | None:intergenic | 20.0% |
!! | CTATTGAGTATATATGAATA+TGG | - | chr7_1:7911134-7911153 | Msa1008020:five_prime_UTR | 20.0% |
! | GAATAGAAGCAATTAAACTT+TGG | - | chr7_1:7904695-7904714 | Msa1008020:intron | 25.0% |
! | AATTAAACTTTGGGTATGTT+TGG | - | chr7_1:7904705-7904724 | Msa1008020:intron | 25.0% |
!!! | ATGGTATTGACTTATAATCT+GGG | + | chr7_1:7904989-7905008 | None:intergenic | 25.0% |
! | AAAGAATAGAAAATCACCTT+GGG | + | chr7_1:7905463-7905482 | None:intergenic | 25.0% |
! | TAAAGAATAGAAAATCACCT+TGG | + | chr7_1:7905464-7905483 | None:intergenic | 25.0% |
! | GAACAAGTTTGAATTGAAAT+AGG | - | chr7_1:7905489-7905508 | Msa1008020:CDS | 25.0% |
!! | TTCAAACAAATGAGCTTTTT+GGG | + | chr7_1:7905881-7905900 | None:intergenic | 25.0% |
! | TTTCAATTATGTTAGGTGAT+AGG | - | chr7_1:7905905-7905924 | Msa1008020:CDS | 25.0% |
! | TTCAATTATGTTAGGTGATA+GGG | - | chr7_1:7905906-7905925 | Msa1008020:CDS | 25.0% |
!!! | ATATTTGTTATAGATCCTGA+AGG | - | chr7_1:7906509-7906528 | Msa1008020:intron | 25.0% |
!!! | TATTTGTTATAGATCCTGAA+GGG | - | chr7_1:7906510-7906529 | Msa1008020:intron | 25.0% |
!!! | TATGAAGCATTGGAAAAATA+TGG | - | chr7_1:7906536-7906555 | Msa1008020:intron | 25.0% |
!!! | ATGAAGCATTGGAAAAATAT+GGG | - | chr7_1:7906537-7906556 | Msa1008020:intron | 25.0% |
! | TTATATCTATTCCCTAAGAT+TGG | - | chr7_1:7906741-7906760 | Msa1008020:intron | 25.0% |
!! | TTGGAATAGATTTTACAAAC+TGG | - | chr7_1:7906806-7906825 | Msa1008020:intron | 25.0% |
!!! | AATACTTTTTTCGCTCTAAA+TGG | - | chr7_1:7906959-7906978 | Msa1008020:intron | 25.0% |
!! | GGATTGTCTCATAATTTTAT+TGG | - | chr7_1:7907086-7907105 | Msa1008020:CDS | 25.0% |
!! | AATTTTATTGGAAACCAAAC+AGG | - | chr7_1:7907098-7907117 | Msa1008020:CDS | 25.0% |
!!! | AAAAGAAGCATCCAAATTAT+GGG | + | chr7_1:7907148-7907167 | None:intergenic | 25.0% |
!!! | TAAAAGAAGCATCCAAATTA+TGG | + | chr7_1:7907149-7907168 | None:intergenic | 25.0% |
! | TATGAATCTCATCAATGAAA+AGG | + | chr7_1:7907641-7907660 | None:intergenic | 25.0% |
!! | CATTTTCAGATATCTGATTT+TGG | - | chr7_1:7907701-7907720 | Msa1008020:intron | 25.0% |
!! | TTTTCAGATATCTGATTTTG+GGG | - | chr7_1:7907703-7907722 | Msa1008020:intron | 25.0% |
!!! | ATTATACTTTTTCGCATGTT+AGG | - | chr7_1:7907932-7907951 | Msa1008020:CDS | 25.0% |
! | AAGATACCATTTCAATACTA+AGG | - | chr7_1:7908125-7908144 | Msa1008020:intron | 25.0% |
! | AGATACCATTTCAATACTAA+GGG | - | chr7_1:7908126-7908145 | Msa1008020:intron | 25.0% |
!! | AAAACAAACTTGCTTGTTTA+TGG | - | chr7_1:7908421-7908440 | Msa1008020:intron | 25.0% |
!! | TAGAATTGTTTATTAGCTTC+CGG | - | chr7_1:7908469-7908488 | Msa1008020:intron | 25.0% |
! | ATTTGCTTAAAATCTCTTTC+TGG | - | chr7_1:7908756-7908775 | Msa1008020:intron | 25.0% |
! | TTTGCTTAAAATCTCTTTCT+GGG | - | chr7_1:7908757-7908776 | Msa1008020:intron | 25.0% |
!! | CTTATGAACATTATTGATTG+CGG | + | chr7_1:7908783-7908802 | None:intergenic | 25.0% |
! | ATCAATAGCTGTAATTTGAA+AGG | + | chr7_1:7908822-7908841 | None:intergenic | 25.0% |
!! | TCAAATTACAGCTATTGATT+TGG | - | chr7_1:7908823-7908842 | Msa1008020:intron | 25.0% |
!!! | CTCTCTTTTAAAAGATAAAC+AGG | - | chr7_1:7909009-7909028 | Msa1008020:intron | 25.0% |
! | GAAAAACTAGTGCAATTAAA+TGG | - | chr7_1:7909175-7909194 | Msa1008020:CDS | 25.0% |
!!! | TGCAATTAAATGGATTGATT+TGG | - | chr7_1:7909185-7909204 | Msa1008020:CDS | 25.0% |
! | TTAGATGAATATATGAACTC+TGG | - | chr7_1:7909424-7909443 | Msa1008020:intron | 25.0% |
! | TAGATGAATATATGAACTCT+GGG | - | chr7_1:7909425-7909444 | Msa1008020:intron | 25.0% |
! | TCAAACAAAATAACAGCATA+AGG | + | chr7_1:7909889-7909908 | None:intergenic | 25.0% |
!! | TTCCTTCAAATTTTAGATGA+TGG | - | chr7_1:7909946-7909965 | Msa1008020:CDS | 25.0% |
!! | TTCCATCATCTAAAATTTGA+AGG | + | chr7_1:7909951-7909970 | None:intergenic | 25.0% |
! | ATCAACTCTATTCATAAACT+CGG | + | chr7_1:7910148-7910167 | None:intergenic | 25.0% |
!! | TTTCTACATTTTATTGCAGT+TGG | - | chr7_1:7910577-7910596 | Msa1008020:intron | 25.0% |
TTTCTTCTGTTGAAGGAAAT+GGG | + | chr7_1:7904244-7904263 | None:intergenic | 30.0% | |
CAAACAAACTTTCTTGCAAA+TGG | - | chr7_1:7904352-7904371 | Msa1008020:CDS | 30.0% | |
TAAAGTGAATCTATGAAGCA+CGG | - | chr7_1:7904458-7904477 | Msa1008020:CDS | 30.0% | |
TGCTTCTATTCTAATTAGTC+TGG | + | chr7_1:7904686-7904705 | None:intergenic | 30.0% | |
! | TGAATAATGGAAAGTGACTT+AGG | - | chr7_1:7904875-7904894 | Msa1008020:intron | 30.0% |
!! | GATGGTATTGACTTATAATC+TGG | + | chr7_1:7904990-7905009 | None:intergenic | 30.0% |
GATTATAAGTCAATACCATC+AGG | - | chr7_1:7904990-7905009 | Msa1008020:intron | 30.0% | |
TTTACTGGTAAGTGATTAAG+TGG | + | chr7_1:7905038-7905057 | None:intergenic | 30.0% | |
!! | TCATTAATTTGCTAACCACA+TGG | - | chr7_1:7905092-7905111 | Msa1008020:CDS | 30.0% |
! | TATGTGTATTATAGCTTGTG+AGG | - | chr7_1:7905173-7905192 | Msa1008020:CDS | 30.0% |
!!! | GGTTTTGAATTTTGATGCAA+TGG | - | chr7_1:7905221-7905240 | Msa1008020:CDS | 30.0% |
ACTTATTTAAGCTTGTCTAC+TGG | + | chr7_1:7905810-7905829 | None:intergenic | 30.0% | |
! | CTTCAAACAAATGAGCTTTT+TGG | + | chr7_1:7905882-7905901 | None:intergenic | 30.0% |
! | GAAGCACTTTCAATTATGTT+AGG | - | chr7_1:7905898-7905917 | Msa1008020:CDS | 30.0% |
TCAATTATGTTAGGTGATAG+GGG | - | chr7_1:7905907-7905926 | Msa1008020:CDS | 30.0% | |
AATGGAAAATGTCATTACCT+TGG | + | chr7_1:7906156-7906175 | None:intergenic | 30.0% | |
! | TATCTTTGGGAAAATTAAGC+AGG | - | chr7_1:7906243-7906262 | Msa1008020:CDS | 30.0% |
! | ATCTTTGGGAAAATTAAGCA+GGG | - | chr7_1:7906244-7906263 | Msa1008020:CDS | 30.0% |
ACCTAAATGTTGTGAAATTG+TGG | - | chr7_1:7906361-7906380 | Msa1008020:CDS | 30.0% | |
TGGGAAATAATCCAATCTTA+GGG | + | chr7_1:7906755-7906774 | None:intergenic | 30.0% | |
ATGGGAAATAATCCAATCTT+AGG | + | chr7_1:7906756-7906775 | None:intergenic | 30.0% | |
! | TATGATCTGCATGCAAATTT+TGG | - | chr7_1:7907004-7907023 | Msa1008020:CDS | 30.0% |
! | TTTTTGCTTTCCCCATAATT+TGG | - | chr7_1:7907134-7907153 | Msa1008020:CDS | 30.0% |
!! | AAAGAAGCATCCAAATTATG+GGG | + | chr7_1:7907147-7907166 | None:intergenic | 30.0% |
TCTGTTTCAAAGAAAGAGAT+AGG | + | chr7_1:7907233-7907252 | None:intergenic | 30.0% | |
AATTAAAATTAGACTGGCAG+AGG | + | chr7_1:7907412-7907431 | None:intergenic | 30.0% | |
ATTTCAATGATCTTATGCAC+CGG | - | chr7_1:7907491-7907510 | Msa1008020:intron | 30.0% | |
TTATTACTGGAGCAAAATAC+CGG | - | chr7_1:7907550-7907569 | Msa1008020:intron | 30.0% | |
ATGAGATTCATACAGTTGTT+GGG | - | chr7_1:7907649-7907668 | Msa1008020:CDS | 30.0% | |
TTGCCAAAAGGTTGTTAAAT+CGG | - | chr7_1:7907820-7907839 | Msa1008020:intron | 30.0% | |
GATACCATTTCAATACTAAG+GGG | - | chr7_1:7908127-7908146 | Msa1008020:intron | 30.0% | |
TTAAACAAGTTACCTTTGTC+AGG | + | chr7_1:7908256-7908275 | None:intergenic | 30.0% | |
!!! | AATTTTGTTTTAGCCTCCAT+AGG | - | chr7_1:7908524-7908543 | Msa1008020:CDS | 30.0% |
! | GCATTTCTATTGTGGATTTT+TGG | - | chr7_1:7908597-7908616 | Msa1008020:CDS | 30.0% |
ATCTAATTGATGCTACTGTT+AGG | - | chr7_1:7908666-7908685 | Msa1008020:CDS | 30.0% | |
TCTAATTGATGCTACTGTTA+GGG | - | chr7_1:7908667-7908686 | Msa1008020:CDS | 30.0% | |
TAAGCAAATAATCTCGATAG+TGG | + | chr7_1:7908745-7908764 | None:intergenic | 30.0% | |
CGCAATCAATAATGTTCATA+AGG | - | chr7_1:7908781-7908800 | Msa1008020:intron | 30.0% | |
! | TCTGTATAATTTTCACCATG+TGG | - | chr7_1:7909153-7909172 | Msa1008020:CDS | 30.0% |
ATACAGGACACATTAGTATT+TGG | + | chr7_1:7909270-7909289 | None:intergenic | 30.0% | |
TCTATCTGTTGCATAAATAC+AGG | + | chr7_1:7909286-7909305 | None:intergenic | 30.0% | |
!!! | GATTGTTGAAGTTTTGAAAC+AGG | + | chr7_1:7909520-7909539 | None:intergenic | 30.0% |
AAAACTTCAACAATCAGAGA+GGG | - | chr7_1:7909525-7909544 | Msa1008020:intron | 30.0% | |
ATAAACATGAAGCTAGCAAT+TGG | + | chr7_1:7909670-7909689 | None:intergenic | 30.0% | |
! | AATTGCTAGCTTCATGTTTA+TGG | - | chr7_1:7909669-7909688 | Msa1008020:intron | 30.0% |
! | ATTGCTAGCTTCATGTTTAT+GGG | - | chr7_1:7909670-7909689 | Msa1008020:intron | 30.0% |
TTCTTCTGTATTGAACATGT+AGG | + | chr7_1:7909740-7909759 | None:intergenic | 30.0% | |
AATTGATATGAGTGAGTACA+TGG | - | chr7_1:7909771-7909790 | Msa1008020:CDS | 30.0% | |
ATGCAGTTTCAAGATTGATT+GGG | - | chr7_1:7909800-7909819 | Msa1008020:CDS | 30.0% | |
TTTGTTTGATGAGATTGAGA+AGG | - | chr7_1:7909900-7909919 | Msa1008020:CDS | 30.0% | |
GGTCATAATGATAACAGTAT+TGG | + | chr7_1:7910010-7910029 | None:intergenic | 30.0% | |
ATCATTATGACCTCAAATGT+TGG | - | chr7_1:7910018-7910037 | Msa1008020:intron | 30.0% | |
TCAACTCTATTCATAAACTC+GGG | + | chr7_1:7910147-7910166 | None:intergenic | 30.0% | |
CAATGCTACTAATTTGATCA+CGG | + | chr7_1:7910197-7910216 | None:intergenic | 30.0% | |
ATCAAATTAGTAGCATTGTC+CGG | - | chr7_1:7910199-7910218 | Msa1008020:intron | 30.0% | |
TTTGAAAAATGGAAAGGAGT+GGG | + | chr7_1:7910245-7910264 | None:intergenic | 30.0% | |
!! | TTTTGAAAAATGGAAAGGAG+TGG | + | chr7_1:7910246-7910265 | None:intergenic | 30.0% |
ATTTGTGATCCTTGATATCA+AGG | - | chr7_1:7910353-7910372 | Msa1008020:intron | 30.0% | |
CTTGATATCAAGGAAAATCA+CGG | - | chr7_1:7910363-7910382 | Msa1008020:intron | 30.0% | |
TGAGACATTAAAAACCATGA+TGG | - | chr7_1:7910432-7910451 | Msa1008020:intron | 30.0% | |
GTAGAAAAAGATAGGAGTTA+GGG | + | chr7_1:7910564-7910583 | None:intergenic | 30.0% | |
TGTAGAAAAAGATAGGAGTT+AGG | + | chr7_1:7910565-7910584 | None:intergenic | 30.0% | |
ATCTAGTATGCTGAGAAATA+TGG | + | chr7_1:7910948-7910967 | None:intergenic | 30.0% | |
GTTTGCGTTAATACTGAGAA+AGG | + | chr7_1:7904096-7904115 | None:intergenic | 35.0% | |
AAGGAAATGGGAGTTGAATA+GGG | + | chr7_1:7904232-7904251 | None:intergenic | 35.0% | |
GTTTCTTCTGTTGAAGGAAA+TGG | + | chr7_1:7904245-7904264 | None:intergenic | 35.0% | |
TGTTTGGTATCACAATGAGT+TGG | - | chr7_1:7904721-7904740 | Msa1008020:intron | 35.0% | |
! | AAGCATTGTAGAGAGAGTAT+AGG | - | chr7_1:7904816-7904835 | Msa1008020:intron | 35.0% |
CTACTGATAAGTTCATTCAG+CGG | - | chr7_1:7905434-7905453 | Msa1008020:CDS | 35.0% | |
TAAGTACCCATTAGCAGATT+AGG | - | chr7_1:7905563-7905582 | Msa1008020:CDS | 35.0% | |
AAGTACCCATTAGCAGATTA+GGG | - | chr7_1:7905564-7905583 | Msa1008020:CDS | 35.0% | |
! | CACATAAGCACTTTTATGAC+AGG | + | chr7_1:7905633-7905652 | None:intergenic | 35.0% |
! | AGTTTGTTCGGAAGAACTTA+CGG | + | chr7_1:7905773-7905792 | None:intergenic | 35.0% |
! | TAAGCGATTGTCAGTTTGTT+CGG | + | chr7_1:7905785-7905804 | None:intergenic | 35.0% |
CAAATATCTCTGGTCTCTTT+GGG | + | chr7_1:7905836-7905855 | None:intergenic | 35.0% | |
ACAAATATCTCTGGTCTCTT+TGG | + | chr7_1:7905837-7905856 | None:intergenic | 35.0% | |
AACACCAGAACAAATATCTC+TGG | + | chr7_1:7905846-7905865 | None:intergenic | 35.0% | |
ATTTGTTTCAGTTGAGCACT+TGG | - | chr7_1:7906012-7906031 | Msa1008020:intron | 35.0% | |
! | AGATTTTCAGATATCTCAGC+CGG | - | chr7_1:7906081-7906100 | Msa1008020:intron | 35.0% |
! | TCTATTGCAGATTTTAGACC+CGG | + | chr7_1:7906103-7906122 | None:intergenic | 35.0% |
AATCTGCAATAGAGTCCATT+AGG | - | chr7_1:7906110-7906129 | Msa1008020:intron | 35.0% | |
ATCTGCAATAGAGTCCATTA+GGG | - | chr7_1:7906111-7906130 | Msa1008020:intron | 35.0% | |
! | TCTTTGGGAAAATTAAGCAG+GGG | - | chr7_1:7906245-7906264 | Msa1008020:CDS | 35.0% |
GCCACAATTTCACAACATTT+AGG | + | chr7_1:7906365-7906384 | None:intergenic | 35.0% | |
ATGTTGTGAAATTGTGGCTA+TGG | - | chr7_1:7906367-7906386 | Msa1008020:CDS | 35.0% | |
TGGCACAAAATATCACATAG+TGG | - | chr7_1:7906411-7906430 | Msa1008020:intron | 35.0% | |
TAAAGCAGTGTTGTCAATTG+CGG | + | chr7_1:7906490-7906509 | None:intergenic | 35.0% | |
TCATCATCTCTTCCTATAAC+TGG | + | chr7_1:7906602-7906621 | None:intergenic | 35.0% | |
GAAAGACTGCAATTTCTGAA+GGG | - | chr7_1:7906696-7906715 | Msa1008020:intron | 35.0% | |
!! | TAGAGCGAAAAAAGTATTCC+AGG | + | chr7_1:7906957-7906976 | None:intergenic | 35.0% |
GGTTTAAATGTGTTCAACCT+AGG | - | chr7_1:7907059-7907078 | Msa1008020:CDS | 35.0% | |
AATGTGTTCAACCTAGGTTA+AGG | - | chr7_1:7907065-7907084 | Msa1008020:CDS | 35.0% | |
TATGAGACAATCCTTAACCT+AGG | + | chr7_1:7907079-7907098 | None:intergenic | 35.0% | |
TGTGCTTCATCAAAATGCTT+AGG | - | chr7_1:7907310-7907329 | Msa1008020:intron | 35.0% | |
GATATAAGCTGAAAAGAGAC+CGG | + | chr7_1:7907513-7907532 | None:intergenic | 35.0% | |
TCAGCTTATATCCCTTGATA+TGG | - | chr7_1:7907521-7907540 | Msa1008020:intron | 35.0% | |
CAGCTTATATCCCTTGATAT+GGG | - | chr7_1:7907522-7907541 | Msa1008020:intron | 35.0% | |
AATAAGTGCACCCATATCAA+GGG | + | chr7_1:7907535-7907554 | None:intergenic | 35.0% | |
TAATAAGTGCACCCATATCA+AGG | + | chr7_1:7907536-7907555 | None:intergenic | 35.0% | |
TATTACTGGAGCAAAATACC+GGG | - | chr7_1:7907551-7907570 | Msa1008020:intron | 35.0% | |
AAAGAAGTAACAGAATCCGA+TGG | - | chr7_1:7907606-7907625 | Msa1008020:CDS | 35.0% | |
GAAAAGGATAGTTTGACCAT+CGG | + | chr7_1:7907625-7907644 | None:intergenic | 35.0% | |
GATGAGATTCATACAGTTGT+TGG | - | chr7_1:7907648-7907667 | Msa1008020:CDS | 35.0% | |
TGAGATTCATACAGTTGTTG+GGG | - | chr7_1:7907650-7907669 | Msa1008020:CDS | 35.0% | |
! | CTTCCGATTTAACAACCTTT+TGG | + | chr7_1:7907826-7907845 | None:intergenic | 35.0% |
CAAAAGGTTGTTAAATCGGA+AGG | - | chr7_1:7907824-7907843 | Msa1008020:intron | 35.0% | |
TAGGCATAAGCGTTATACAA+AGG | + | chr7_1:7907869-7907888 | None:intergenic | 35.0% | |
ATAAAGTAACATGAGCATGC+TGG | - | chr7_1:7907898-7907917 | Msa1008020:intron | 35.0% | |
AATCTCTTAAAGCCTATGCT+CGG | - | chr7_1:7907983-7908002 | Msa1008020:intron | 35.0% | |
CAACAACACTTGATGAGTAT+CGG | - | chr7_1:7908032-7908051 | Msa1008020:intron | 35.0% | |
CGTTTCCAACAAGTTTATGT+TGG | - | chr7_1:7908088-7908107 | Msa1008020:intron | 35.0% | |
GAAATGGTATCTTCAACAGT+AGG | + | chr7_1:7908118-7908137 | None:intergenic | 35.0% | |
CAAGTGCACTATCAGAAATT+CGG | + | chr7_1:7908186-7908205 | None:intergenic | 35.0% | |
! | AATTTCTGATAGTGCACTTG+TGG | - | chr7_1:7908186-7908205 | Msa1008020:intron | 35.0% |
!!! | TTCTATTGTGGATTTTTGGC+TGG | - | chr7_1:7908601-7908620 | Msa1008020:CDS | 35.0% |
GACAGTGTCATCAATTATGA+CGG | + | chr7_1:7908627-7908646 | None:intergenic | 35.0% | |
!! | AGCTATTGATTTGGTTGATG+AGG | - | chr7_1:7908832-7908851 | Msa1008020:intron | 35.0% |
!! | TATTGATTTGGTTGATGAGG+CGG | - | chr7_1:7908835-7908854 | Msa1008020:intron | 35.0% |
! | AGTGATCTCCATTTTCAGTT+TGG | + | chr7_1:7908864-7908883 | None:intergenic | 35.0% |
TCTCACGAATGATACAGATA+AGG | - | chr7_1:7908949-7908968 | Msa1008020:intron | 35.0% | |
! | CAGATAAGGCTTCTAAAGAT+AGG | - | chr7_1:7908963-7908982 | Msa1008020:intron | 35.0% |
AGATAGGTTAAATCGTCTTG+AGG | - | chr7_1:7908979-7908998 | Msa1008020:intron | 35.0% | |
TCGACTTCAATCAATCAAAG+AGG | - | chr7_1:7909075-7909094 | Msa1008020:CDS | 35.0% | |
ACTTCAATCAATCAAAGAGG+AGG | - | chr7_1:7909078-7909097 | Msa1008020:CDS | 35.0% | |
!!! | ATTGCACTAGTTTTTCCACA+TGG | + | chr7_1:7909171-7909190 | None:intergenic | 35.0% |
CATACTTTAATTCAGCAGCA+CGG | + | chr7_1:7909357-7909376 | None:intergenic | 35.0% | |
ATGCTAAGAGAAGAAGTAAC+CGG | - | chr7_1:7909454-7909473 | Msa1008020:intron | 35.0% | |
AATTTCAGCAATATCACTCC+CGG | + | chr7_1:7909476-7909495 | None:intergenic | 35.0% | |
TTGCTGAAATTGTAAGCAAG+TGG | - | chr7_1:7909485-7909504 | Msa1008020:intron | 35.0% | |
!!! | AAGTTTTGAAACAGGAATGC+CGG | + | chr7_1:7909512-7909531 | None:intergenic | 35.0% |
CAAAACTTCAACAATCAGAG+AGG | - | chr7_1:7909524-7909543 | Msa1008020:intron | 35.0% | |
GGAGAAGTTGTTGTATTTAG+AGG | - | chr7_1:7909546-7909565 | Msa1008020:intron | 35.0% | |
! | TTGCTAGCTTCATGTTTATG+GGG | - | chr7_1:7909671-7909690 | Msa1008020:intron | 35.0% |
CATGCAGTTTCAAGATTGAT+TGG | - | chr7_1:7909799-7909818 | Msa1008020:CDS | 35.0% | |
TGCAGTTTCAAGATTGATTG+GGG | - | chr7_1:7909801-7909820 | Msa1008020:CDS | 35.0% | |
AAATAACAGCATAAGGTCTG+CGG | + | chr7_1:7909882-7909901 | None:intergenic | 35.0% | |
ATCGCAGTACATTCTAAACA+CGG | - | chr7_1:7910041-7910060 | Msa1008020:intron | 35.0% | |
GTTTCATAGGCTAATTCCTT+AGG | + | chr7_1:7910081-7910100 | None:intergenic | 35.0% | |
CAACTCTATTCATAAACTCG+GGG | + | chr7_1:7910146-7910165 | None:intergenic | 35.0% | |
! | CGTGATTTTCCTTGATATCA+AGG | + | chr7_1:7910365-7910384 | None:intergenic | 35.0% |
AATGTCTCAGCAATCCTAAA+GGG | + | chr7_1:7910421-7910440 | None:intergenic | 35.0% | |
TAATGTCTCAGCAATCCTAA+AGG | + | chr7_1:7910422-7910441 | None:intergenic | 35.0% | |
TCATGAAGGCTATTGTGATT+GGG | + | chr7_1:7910458-7910477 | None:intergenic | 35.0% | |
TTCATGAAGGCTATTGTGAT+TGG | + | chr7_1:7910459-7910478 | None:intergenic | 35.0% | |
TTGATGTAATTCACATCGCA+AGG | + | chr7_1:7910495-7910514 | None:intergenic | 35.0% | |
ATCCTGAAAATCTTGCAAGA+AGG | + | chr7_1:7910519-7910538 | None:intergenic | 35.0% | |
GTTAGGGATGTTAAATGACA+TGG | + | chr7_1:7910548-7910567 | None:intergenic | 35.0% | |
TTAGGATATGACCCTAACTA+TGG | - | chr7_1:7910677-7910696 | Msa1008020:intron | 35.0% | |
AAGAGTGATTCAGCAAAATG+TGG | - | chr7_1:7910715-7910734 | Msa1008020:intron | 35.0% | |
GAGAGGAGAATTTAAAGATG+AGG | - | chr7_1:7910763-7910782 | Msa1008020:intron | 35.0% | |
!!! | GTGAAAACTAGTTTTTGCTG+TGG | + | chr7_1:7910839-7910858 | None:intergenic | 35.0% |
GTTCGTTTAGTCAATTCTGA+AGG | + | chr7_1:7911100-7911119 | None:intergenic | 35.0% | |
CCATCACTGAACTGAATTGA+AGG | + | chr7_1:7904186-7904205 | None:intergenic | 40.0% | |
CCTTCAATTCAGTTCAGTGA+TGG | - | chr7_1:7904183-7904202 | Msa1008020:three_prime_UTR | 40.0% | |
GAAGGAAATGGGAGTTGAAT+AGG | + | chr7_1:7904233-7904252 | None:intergenic | 40.0% | |
! | AGCACTGTTTCTTCTGTTGA+AGG | + | chr7_1:7904251-7904270 | None:intergenic | 40.0% |
TGATTTGAGTGAAACGCGTT+TGG | + | chr7_1:7904317-7904336 | None:intergenic | 40.0% | |
TTCTTCAACTGGAACTGGAA+GGG | - | chr7_1:7904426-7904445 | Msa1008020:CDS | 40.0% | |
TTAGCCCACCTAAATTGACA+CGG | - | chr7_1:7904926-7904945 | Msa1008020:intron | 40.0% | |
! | GATTTTCCCCGTGTCAATTT+AGG | + | chr7_1:7904937-7904956 | None:intergenic | 40.0% |
AGCTGAGAAAACTATCCATG+TGG | + | chr7_1:7905110-7905129 | None:intergenic | 40.0% | |
CTCAGCTTACTTTGCAGAAT+TGG | - | chr7_1:7905123-7905142 | Msa1008020:CDS | 40.0% | |
! | TTATAGCTTGTGAGGTACAG+CGG | - | chr7_1:7905181-7905200 | Msa1008020:CDS | 40.0% |
AGAGAACAAGCATCAGATTG+TGG | - | chr7_1:7905312-7905331 | Msa1008020:CDS | 40.0% | |
! | GCATTTGATGAAGGCTTTGT+TGG | - | chr7_1:7905342-7905361 | Msa1008020:CDS | 40.0% |
! | GCTTTGTTGGAGCAAAAGAA+TGG | - | chr7_1:7905355-7905374 | Msa1008020:CDS | 40.0% |
TTAATGAAACGCTCATGCAG+AGG | - | chr7_1:7905605-7905624 | Msa1008020:CDS | 40.0% | |
ACAGTTCGACTCATACTAGT+AGG | + | chr7_1:7905659-7905678 | None:intergenic | 40.0% | |
GAGACCAGAGATATTTGTTC+TGG | - | chr7_1:7905839-7905858 | Msa1008020:CDS | 40.0% | |
! | GAATCAGCTGGTTCAATGTT+GGG | - | chr7_1:7905929-7905948 | Msa1008020:intron | 40.0% |
! | AATCAGCTGGTTCAATGTTG+GGG | - | chr7_1:7905930-7905949 | Msa1008020:intron | 40.0% |
AGGGACTTCCAGAAAGAATA+CGG | - | chr7_1:7905983-7906002 | Msa1008020:intron | 40.0% | |
ATGAATCCCCGTATTCTTTC+TGG | + | chr7_1:7905994-7906013 | None:intergenic | 40.0% | |
!!! | CTTGGTTCTTGGTTTTATCC+AGG | - | chr7_1:7906030-7906049 | Msa1008020:intron | 40.0% |
TTTATCCAGGACCAACGATT+CGG | - | chr7_1:7906043-7906062 | Msa1008020:intron | 40.0% | |
! | GATTTTCAGATATCTCAGCC+GGG | - | chr7_1:7906082-7906101 | Msa1008020:intron | 40.0% |
TCTGCAATAGAGTCCATTAG+GGG | - | chr7_1:7906112-7906131 | Msa1008020:intron | 40.0% | |
TACCTTGGTCAATTACTGAC+TGG | + | chr7_1:7906141-7906160 | None:intergenic | 40.0% | |
! | GCTAGAGCACTTATATGTAG+TGG | - | chr7_1:7906435-7906454 | Msa1008020:intron | 40.0% |
AATGCTTCATACTTCCCTTC+AGG | + | chr7_1:7906527-7906546 | None:intergenic | 40.0% | |
! | TGAAGGGAAGTATGAAGCAT+TGG | - | chr7_1:7906526-7906545 | Msa1008020:intron | 40.0% |
TGGGAAAGATTTGACAGCAA+TGG | - | chr7_1:7906556-7906575 | Msa1008020:intron | 40.0% | |
GGAAAGCTTGATCCAGTTAT+AGG | - | chr7_1:7906587-7906606 | Msa1008020:intron | 40.0% | |
GAAGAGATGATGAAATACGC+AGG | - | chr7_1:7906609-7906628 | Msa1008020:intron | 40.0% | |
GGGATTGTTCTTTGTTCTTC+TGG | + | chr7_1:7906651-7906670 | None:intergenic | 40.0% | |
GGAAAGACTGCAATTTCTGA+AGG | - | chr7_1:7906695-7906714 | Msa1008020:intron | 40.0% | |
! | TCAAGCTTTGATGAACCGTA+GGG | - | chr7_1:7907285-7907304 | Msa1008020:intron | 40.0% |
TTGATGAAGCACATACCCTA+CGG | + | chr7_1:7907303-7907322 | None:intergenic | 40.0% | |
GATATGGGTGCACTTATTAC+TGG | - | chr7_1:7907537-7907556 | Msa1008020:intron | 40.0% | |
ATTACTGGAGCAAAATACCG+GGG | - | chr7_1:7907552-7907571 | Msa1008020:intron | 40.0% | |
AGTAATAGATCAGCCTTCAG+CGG | + | chr7_1:7907738-7907757 | None:intergenic | 40.0% | |
TACCAAAAATGTCGGTAGAC+AGG | - | chr7_1:7907777-7907796 | Msa1008020:intron | 40.0% | |
! | GTATCGGAAGTATATCGAGA+AGG | - | chr7_1:7908048-7908067 | Msa1008020:intron | 40.0% |
GTTGGCCAACATAAACTTGT+TGG | + | chr7_1:7908096-7908115 | None:intergenic | 40.0% | |
TGGTATCTTCAACAGTAGGT+TGG | + | chr7_1:7908114-7908133 | None:intergenic | 40.0% | |
! | CAGTCCCCTTAGTATTGAAA+TGG | + | chr7_1:7908134-7908153 | None:intergenic | 40.0% |
TTTCAATACTAAGGGGACTG+CGG | - | chr7_1:7908134-7908153 | Msa1008020:intron | 40.0% | |
! | GAAAGGTATGAGCTACATCA+TGG | - | chr7_1:7908157-7908176 | Msa1008020:intron | 40.0% |
CTCTCGGATCGATATATTAG+TGG | - | chr7_1:7908220-7908239 | Msa1008020:intron | 40.0% | |
! | GGAAGATTTTTGCCTGACAA+AGG | - | chr7_1:7908241-7908260 | Msa1008020:intron | 40.0% |
CAAAATTCGTGACAACACCT+TGG | + | chr7_1:7908511-7908530 | None:intergenic | 40.0% | |
ATAACAGTTGTTGCTGCCTA+TGG | + | chr7_1:7908543-7908562 | None:intergenic | 40.0% | |
ATCCACCATGTTTATGCCAT+AGG | - | chr7_1:7908563-7908582 | Msa1008020:CDS | 40.0% | |
AACCTATGGCATAAACATGG+TGG | + | chr7_1:7908568-7908587 | None:intergenic | 40.0% | |
GCAAACCTATGGCATAAACA+TGG | + | chr7_1:7908571-7908590 | None:intergenic | 40.0% | |
TTGATCTCATCAAGTGCAGT+AGG | + | chr7_1:7908893-7908912 | None:intergenic | 40.0% | |
! | CGTGCTGCTGAATTAAAGTA+TGG | - | chr7_1:7909355-7909374 | Msa1008020:intron | 40.0% |
GTTGTCGTTGCAATGAGTTA+AGG | + | chr7_1:7909384-7909403 | None:intergenic | 40.0% | |
TGCTAAGAGAAGAAGTAACC+GGG | - | chr7_1:7909455-7909474 | Msa1008020:intron | 40.0% | |
GAAATTGTAAGCAAGTGGAC+CGG | - | chr7_1:7909490-7909509 | Msa1008020:intron | 40.0% | |
GTACTTCATAAGCGTGTTGT+AGG | - | chr7_1:7909571-7909590 | Msa1008020:intron | 40.0% | |
ACATGAAGCTAGCAATTGGA+CGG | + | chr7_1:7909666-7909685 | None:intergenic | 40.0% | |
! | TCAGTTTTTCCTACACCTGT+AGG | + | chr7_1:7909697-7909716 | None:intergenic | 40.0% |
AGGTGTAGGAAAAACTGAGT+TGG | - | chr7_1:7909699-7909718 | Msa1008020:intron | 40.0% | |
CCTATGAAACCATAAAGCAG+CGG | - | chr7_1:7910091-7910110 | Msa1008020:intron | 40.0% | |
CTATGAAACCATAAAGCAGC+GGG | - | chr7_1:7910092-7910111 | Msa1008020:intron | 40.0% | |
TCCTAAAGGGACTGCAATTA+CGG | + | chr7_1:7910408-7910427 | None:intergenic | 40.0% | |
! | AGCCTTCTTGCAAGATTTTC+AGG | - | chr7_1:7910514-7910533 | Msa1008020:intron | 40.0% |
AGATCGCAAGATGAAAATCC+AGG | - | chr7_1:7910622-7910641 | Msa1008020:intron | 40.0% | |
TAAGCTTCCAAGAAGTTGGA+TGG | + | chr7_1:7910660-7910679 | None:intergenic | 40.0% | |
ATCCAACTTCTTGGAAGCTT+AGG | - | chr7_1:7910659-7910678 | Msa1008020:intron | 40.0% | |
ATCCTAAGCTTCCAAGAAGT+TGG | + | chr7_1:7910664-7910683 | None:intergenic | 40.0% | |
! | TGCTGAATCACTCTTTTGAC+TGG | + | chr7_1:7910710-7910729 | None:intergenic | 40.0% |
! | TTGCTGTGGAAGTTGATTGT+TGG | + | chr7_1:7910825-7910844 | None:intergenic | 40.0% |
!! | GCAGTAGAAAGCATTCATTC+AGG | + | chr7_1:7910924-7910943 | None:intergenic | 40.0% |
!! | ACAATGCTTTGGAGTGACAA+AGG | + | chr7_1:7911037-7911056 | None:intergenic | 40.0% |
CGGAGAAAGAGAGAGAAACA+CGG | + | chr7_1:7904294-7904313 | None:intergenic | 45.0% | |
TTTGAGTGAAACGCGTTTGG+CGG | + | chr7_1:7904314-7904333 | None:intergenic | 45.0% | |
CGTTGTGAAGCTTCTTCAAC+TGG | - | chr7_1:7904415-7904434 | Msa1008020:CDS | 45.0% | |
GAAGCTTCTTCAACTGGAAC+TGG | - | chr7_1:7904421-7904440 | Msa1008020:CDS | 45.0% | |
CTTCTTCAACTGGAACTGGA+AGG | - | chr7_1:7904425-7904444 | Msa1008020:CDS | 45.0% | |
TCTTTCGAGCTCGTTGAGTT+TGG | + | chr7_1:7904789-7904808 | None:intergenic | 45.0% | |
TAGCCCACCTAAATTGACAC+GGG | - | chr7_1:7904927-7904946 | Msa1008020:intron | 45.0% | |
TTCCCCGTGTCAATTTAGGT+GGG | + | chr7_1:7904933-7904952 | None:intergenic | 45.0% | |
TTTCCCCGTGTCAATTTAGG+TGG | + | chr7_1:7904934-7904953 | None:intergenic | 45.0% | |
! | TGGGAGTGTGATCTTCTTCA+AGG | + | chr7_1:7904970-7904989 | None:intergenic | 45.0% |
ACAGCAAGAGTTCACAGAGA+TGG | - | chr7_1:7905252-7905271 | Msa1008020:CDS | 45.0% | |
AAGAGTTCACAGAGATGGCA+TGG | - | chr7_1:7905257-7905276 | Msa1008020:CDS | 45.0% | |
! | GGAGACAGAGCATTTGATGA+AGG | - | chr7_1:7905333-7905352 | Msa1008020:CDS | 45.0% |
! | AAAAGAATGGTCTTGCTCGC+AGG | - | chr7_1:7905368-7905387 | Msa1008020:CDS | 45.0% |
GATCTTTACCAAGGTTGGAG+TGG | - | chr7_1:7905390-7905409 | Msa1008020:CDS | 45.0% | |
ACAGGCCCTAATCTGCTAAT+GGG | + | chr7_1:7905572-7905591 | None:intergenic | 45.0% | |
AACAGGCCCTAATCTGCTAA+TGG | + | chr7_1:7905573-7905592 | None:intergenic | 45.0% | |
TTAGCAGATTAGGGCCTGTT+TGG | - | chr7_1:7905573-7905592 | Msa1008020:CDS | 45.0% | |
TCCGCGACAGCTTAAGAAAA+CGG | + | chr7_1:7905700-7905719 | None:intergenic | 45.0% | |
! | GGAATCAGCTGGTTCAATGT+TGG | - | chr7_1:7905928-7905947 | Msa1008020:intron | 45.0% |
! | GTATTCTTTCTGGAAGTCCC+TGG | + | chr7_1:7905984-7906003 | None:intergenic | 45.0% |
GGGACTTCCAGAAAGAATAC+GGG | - | chr7_1:7905984-7906003 | Msa1008020:intron | 45.0% | |
GGACTTCCAGAAAGAATACG+GGG | - | chr7_1:7905985-7906004 | Msa1008020:intron | 45.0% | |
! | TCAGTTGAGCACTTGGTTCT+TGG | - | chr7_1:7906019-7906038 | Msa1008020:intron | 45.0% |
TTATCCAGGACCAACGATTC+GGG | - | chr7_1:7906044-7906063 | Msa1008020:intron | 45.0% | |
TTGACAGCAATGGCTAAAGC+AGG | - | chr7_1:7906566-7906585 | Msa1008020:intron | 45.0% | |
! | AAGAACAATCCCGTGCTGAT+TGG | - | chr7_1:7906659-7906678 | Msa1008020:intron | 45.0% |
ATTGCAGTCTTTCCAACACC+AGG | + | chr7_1:7906689-7906708 | None:intergenic | 45.0% | |
CTACGGTTCATCAAAGCTTG+AGG | + | chr7_1:7907286-7907305 | None:intergenic | 45.0% | |
! | CTCAAGCTTTGATGAACCGT+AGG | - | chr7_1:7907284-7907303 | Msa1008020:intron | 45.0% |
GACTGGCAGAGGATATAGTA+AGG | + | chr7_1:7907401-7907420 | None:intergenic | 45.0% | |
ATTCATACAGTTGTTGGGGC+AGG | - | chr7_1:7907654-7907673 | Msa1008020:CDS | 45.0% | |
GGGGATTAAAAATCCGCTGA+AGG | - | chr7_1:7907722-7907741 | Msa1008020:intron | 45.0% | |
! | AGCCTGTCTACCGACATTTT+TGG | + | chr7_1:7907782-7907801 | None:intergenic | 45.0% |
! | CGCATGTTAGGTGCTACAAA+TGG | - | chr7_1:7907944-7907963 | Msa1008020:CDS | 45.0% |
! | AGGTGCTACAAATGGTGCTA+TGG | - | chr7_1:7907952-7907971 | Msa1008020:CDS | 45.0% |
!! | ACAAATGGTGCTATGGATGC+TGG | - | chr7_1:7907959-7907978 | Msa1008020:CDS | 45.0% |
TTAAAGCCTATGCTCGGAAG+AGG | - | chr7_1:7907989-7908008 | Msa1008020:intron | 45.0% | |
TTCAATACTAAGGGGACTGC+GGG | - | chr7_1:7908135-7908154 | Msa1008020:intron | 45.0% | |
TGTGGAAGCTGCAATTCTCT+CGG | - | chr7_1:7908204-7908223 | Msa1008020:intron | 45.0% | |
AATTCGTGACAACACCTTGG+CGG | + | chr7_1:7908508-7908527 | None:intergenic | 45.0% | |
TATGCCATAGGTTTGCAACG+TGG | - | chr7_1:7908575-7908594 | Msa1008020:CDS | 45.0% | |
AATGCCACGTTGCAAACCTA+TGG | + | chr7_1:7908582-7908601 | None:intergenic | 45.0% | |
GCAACGTGGCATTTCTATTG+TGG | - | chr7_1:7908589-7908608 | Msa1008020:CDS | 45.0% | |
CTGCACTTGATGAGATCAAC+CGG | - | chr7_1:7908894-7908913 | Msa1008020:intron | 45.0% | |
ACTTGATGAGATCAACCGGT+CGG | - | chr7_1:7908898-7908917 | Msa1008020:intron | 45.0% | |
! | GTCTCTCCATCTCTAGTTTC+AGG | + | chr7_1:7908925-7908944 | None:intergenic | 45.0% |
AGTGAACGTTGAGATCCAAC+AGG | - | chr7_1:7909309-7909328 | Msa1008020:intron | 45.0% | |
TCTTGAACGTTGGATAGCCT+CGG | + | chr7_1:7909623-7909642 | None:intergenic | 45.0% | |
AAAGACCTGCTCTTGAACGT+TGG | + | chr7_1:7909633-7909652 | None:intergenic | 45.0% | |
TTCATGTTTATGGGGCCTAC+AGG | - | chr7_1:7909679-7909698 | Msa1008020:intron | 45.0% | |
TCTTCGTACCCAACATATCC+AGG | + | chr7_1:7909832-7909851 | None:intergenic | 45.0% | |
TGGATATGTTGGGTACGAAG+AGG | - | chr7_1:7909831-7909850 | Msa1008020:CDS | 45.0% | |
GGATATGTTGGGTACGAAGA+GGG | - | chr7_1:7909832-7909851 | Msa1008020:CDS | 45.0% | |
! | TGGAAGAGTAACTGACTCAC+AGG | - | chr7_1:7909966-7909985 | Msa1008020:intron | 45.0% |
! | GGAAGAGTAACTGACTCACA+GGG | - | chr7_1:7909967-7909986 | Msa1008020:intron | 45.0% |
GTACTGCGATCCAACATTTG+AGG | + | chr7_1:7910031-7910050 | None:intergenic | 45.0% | |
! | CCGCTGCTTTATGGTTTCAT+AGG | + | chr7_1:7910094-7910113 | None:intergenic | 45.0% |
AACCATAAAGCAGCGGGTAA+TGG | - | chr7_1:7910098-7910117 | Msa1008020:intron | 45.0% | |
! | ATCCATTACCCGCTGCTTTA+TGG | + | chr7_1:7910103-7910122 | None:intergenic | 45.0% |
CTAATTTGATCACGGTCGAG+AGG | + | chr7_1:7910189-7910208 | None:intergenic | 45.0% | |
TAGTAGCATTGTCCGGTTAC+AGG | - | chr7_1:7910206-7910225 | Msa1008020:intron | 45.0% | |
GGAGTGAAGTTACCTGTAAC+CGG | + | chr7_1:7910221-7910240 | None:intergenic | 45.0% | |
GAAAAATGGAAAGGAGTGGG+AGG | + | chr7_1:7910242-7910261 | None:intergenic | 45.0% | |
CTATTGTGATTGGGCCATCA+TGG | + | chr7_1:7910449-7910468 | None:intergenic | 45.0% | |
ATGACCCTAACTATGGAGCT+AGG | - | chr7_1:7910684-7910703 | Msa1008020:intron | 45.0% | |
TGTGGAGAATGAACTTGCCA+AGG | - | chr7_1:7910733-7910752 | Msa1008020:intron | 45.0% | |
GTGGAGAATGAACTTGCCAA+GGG | - | chr7_1:7910734-7910753 | Msa1008020:intron | 45.0% | |
TTCTCCTCTCAGAATACCCT+TGG | + | chr7_1:7910753-7910772 | None:intergenic | 45.0% | |
AAGCTTGTGAAGAATGCTCC+AGG | + | chr7_1:7910901-7910920 | None:intergenic | 45.0% | |
!!! | TTAAATTTTATTTAAACATA+TGG | - | chr7_1:7906899-7906918 | Msa1008020:intron | 5.0% |
GCCGGTGTCTTTGTCCAAAT+CGG | - | chr7_1:7904585-7904604 | Msa1008020:CDS | 50.0% | |
!! | CCCGATTTGGACAAAGACAC+CGG | + | chr7_1:7904589-7904608 | None:intergenic | 50.0% |
CCGGTGTCTTTGTCCAAATC+GGG | - | chr7_1:7904586-7904605 | Msa1008020:CDS | 50.0% | |
CGGTGTCTTTGTCCAAATCG+GGG | - | chr7_1:7904587-7904606 | Msa1008020:CDS | 50.0% | |
GAGACTATGAAGCCCCGATT+TGG | + | chr7_1:7904602-7904621 | None:intergenic | 50.0% | |
AGCCCACCTAAATTGACACG+GGG | - | chr7_1:7904928-7904947 | Msa1008020:intron | 50.0% | |
AGTGGTACCAAGTCCCACTT+GGG | + | chr7_1:7905020-7905039 | None:intergenic | 50.0% | |
AAGTGGTACCAAGTCCCACT+TGG | + | chr7_1:7905021-7905040 | None:intergenic | 50.0% | |
TTGTGAGGTACAGCGGTTGA+CGG | - | chr7_1:7905188-7905207 | Msa1008020:CDS | 50.0% | |
TTGTTCTCTTTCGCCACCTC+CGG | + | chr7_1:7905301-7905320 | None:intergenic | 50.0% | |
TGCTCGCAGGATCTTTACCA+AGG | - | chr7_1:7905381-7905400 | Msa1008020:CDS | 50.0% | |
CGCAGGATCTTTACCAAGGT+TGG | - | chr7_1:7905385-7905404 | Msa1008020:CDS | 50.0% | |
AGTGTTGTCCACTCCAACCT+TGG | + | chr7_1:7905401-7905420 | None:intergenic | 50.0% | |
!! | GCCGTTTTCTTAAGCTGTCG+CGG | - | chr7_1:7905696-7905715 | Msa1008020:CDS | 50.0% |
TAGGTGATAGGGGAATCAGC+TGG | - | chr7_1:7905917-7905936 | Msa1008020:intron | 50.0% | |
TTCAATGTTGGGGCGCGATT+TGG | - | chr7_1:7905940-7905959 | Msa1008020:intron | 50.0% | |
! | AGGGATTGATTCAGAGAGCC+AGG | - | chr7_1:7905963-7905982 | Msa1008020:intron | 50.0% |
! | GGGATTGATTCAGAGAGCCA+GGG | - | chr7_1:7905964-7905983 | Msa1008020:intron | 50.0% |
AGAGTTGCTTCCCGAATCGT+TGG | + | chr7_1:7906057-7906076 | None:intergenic | 50.0% | |
CGCCAGTCAGTAATTGACCA+AGG | - | chr7_1:7906136-7906155 | Msa1008020:CDS | 50.0% | |
AGAACAAGCGCTCGACAGAT+GGG | + | chr7_1:7906774-7906793 | None:intergenic | 50.0% | |
CTTGCTCAGAGAATCGTGCA+AGG | - | chr7_1:7907253-7907272 | Msa1008020:CDS | 50.0% | |
ACCGGGGAGAATTCGAAGAT+AGG | - | chr7_1:7907568-7907587 | Msa1008020:CDS | 50.0% | |
GCCTATCTTCGAATTCTCCC+CGG | + | chr7_1:7907572-7907591 | None:intergenic | 50.0% | |
TGGCGGGAATTTGACAACAC+CGG | + | chr7_1:7908491-7908510 | None:intergenic | 50.0% | |
GTGTTGTCAAATTCCCGCCA+AGG | - | chr7_1:7908491-7908510 | Msa1008020:intron | 50.0% | |
ATTCGTGACAACACCTTGGC+GGG | + | chr7_1:7908507-7908526 | None:intergenic | 50.0% | |
ACAGTTGTTGCTGCCTATGG+AGG | + | chr7_1:7908540-7908559 | None:intergenic | 50.0% | |
! | TCTCTAGTTTCAGGACCGAC+CGG | + | chr7_1:7908916-7908935 | None:intergenic | 50.0% |
GTCGGTCCTGAAACTAGAGA+TGG | - | chr7_1:7908916-7908935 | Msa1008020:intron | 50.0% | |
GCAACGACAACTTGAGAGTG+CGG | - | chr7_1:7909393-7909412 | Msa1008020:intron | 50.0% | |
AGCCTCGGCTACTGCTTTAA+CGG | + | chr7_1:7909608-7909627 | None:intergenic | 50.0% | |
GCTATCCAACGTTCAAGAGC+AGG | - | chr7_1:7909625-7909644 | Msa1008020:intron | 50.0% | |
AAGCTAGCAATTGGACGGTG+AGG | + | chr7_1:7909661-7909680 | None:intergenic | 50.0% | |
TTTATGGGGCCTACAGGTGT+AGG | - | chr7_1:7909685-7909704 | Msa1008020:intron | 50.0% | |
TCGTACCCAACATATCCAGG+TGG | + | chr7_1:7909829-7909848 | None:intergenic | 50.0% | |
TATGTTGGGTACGAAGAGGG+AGG | - | chr7_1:7909835-7909854 | Msa1008020:CDS | 50.0% | |
GGATGATGACACAGCACCTA+AGG | - | chr7_1:7910062-7910081 | Msa1008020:intron | 50.0% | |
CATAAACTCGGGGCGAAAGA+TGG | + | chr7_1:7910136-7910155 | None:intergenic | 50.0% | |
GCCGTAATTGCAGTCCCTTT+AGG | - | chr7_1:7910404-7910423 | Msa1008020:intron | 50.0% | |
GATGCTGCCATCCAACTTCT+TGG | - | chr7_1:7910650-7910669 | Msa1008020:intron | 50.0% | |
CTGGCCTAGCTCCATAGTTA+GGG | + | chr7_1:7910691-7910710 | None:intergenic | 50.0% | |
! | ACTGGCCTAGCTCCATAGTT+AGG | + | chr7_1:7910692-7910711 | None:intergenic | 50.0% |
!! | CTTGCCAAGGGTATTCTGAG+AGG | - | chr7_1:7910746-7910765 | Msa1008020:intron | 50.0% |
ATCTACACCGCAAGAAAGCC+TGG | - | chr7_1:7910880-7910899 | Msa1008020:CDS | 50.0% | |
GAATGCTCCAGGCTTTCTTG+CGG | + | chr7_1:7910890-7910909 | None:intergenic | 50.0% | |
TACCATCAGGCCAACCCAAG+TGG | - | chr7_1:7905003-7905022 | Msa1008020:intron | 55.0% | |
ACCATCAGGCCAACCCAAGT+GGG | - | chr7_1:7905004-7905023 | Msa1008020:CDS | 55.0% | |
GTACCAAGTCCCACTTGGGT+TGG | + | chr7_1:7905016-7905035 | None:intergenic | 55.0% | |
GTTCACAGAGATGGCATGGC+AGG | - | chr7_1:7905261-7905280 | Msa1008020:CDS | 55.0% | |
GCAGGCGATAGTTTCATCGC+CGG | - | chr7_1:7905279-7905298 | Msa1008020:CDS | 55.0% | |
GATAGTTTCATCGCCGGAGG+TGG | - | chr7_1:7905285-7905304 | Msa1008020:CDS | 55.0% | |
GTTCATTCAGCGGCAACCCA+AGG | - | chr7_1:7905444-7905463 | Msa1008020:CDS | 55.0% | |
AAGCTGTCGCGGAGAGCTTA+TGG | - | chr7_1:7905707-7905726 | Msa1008020:CDS | 55.0% | |
! | AATGTTGGGGCGCGATTTGG+AGG | - | chr7_1:7905943-7905962 | Msa1008020:intron | 55.0% |
! | ATGTTGGGGCGCGATTTGGA+GGG | - | chr7_1:7905944-7905963 | Msa1008020:intron | 55.0% |
! | TACTGACTGGCGTCCCCTAA+TGG | + | chr7_1:7906128-7906147 | None:intergenic | 55.0% |
ACCAGGCTCACCAATCAGCA+CGG | + | chr7_1:7906672-7906691 | None:intergenic | 55.0% | |
CTGATTGGTGAGCCTGGTGT+TGG | - | chr7_1:7906674-7906693 | Msa1008020:intron | 55.0% | |
CAGAACAAGCGCTCGACAGA+TGG | + | chr7_1:7906775-7906794 | None:intergenic | 55.0% | |
AGCTCTCCTCTTCCGAGCAT+AGG | + | chr7_1:7907998-7908017 | None:intergenic | 55.0% | |
AGAGGAGAGCTGCGATGCAT+TGG | - | chr7_1:7908007-7908026 | Msa1008020:intron | 55.0% | |
TACTAAGGGGACTGCGGGAA+AGG | - | chr7_1:7908140-7908159 | Msa1008020:intron | 55.0% | |
GGCGGCTGCCAAACTGAAAA+TGG | - | chr7_1:7908853-7908872 | Msa1008020:intron | 55.0% | |
AGGCTGAGCTCACTGAACAG+TGG | - | chr7_1:7909029-7909048 | Msa1008020:intron | 55.0% | |
GGCTGAGCTCACTGAACAGT+GGG | - | chr7_1:7909030-7909049 | Msa1008020:intron | 55.0% | |
CATACTCTCGCTCAGCCTGT+TGG | + | chr7_1:7909327-7909346 | None:intergenic | 55.0% | |
TCGGCTACTGCTTTAACGGC+AGG | + | chr7_1:7909604-7909623 | None:intergenic | 55.0% | |
TGCCGTTAAAGCAGTAGCCG+AGG | - | chr7_1:7909603-7909622 | Msa1008020:intron | 55.0% | |
! | AGATTGATTGGGGCACCACC+TGG | - | chr7_1:7909811-7909830 | Msa1008020:CDS | 55.0% |
GGGCACCACCTGGATATGTT+GGG | - | chr7_1:7909821-7909840 | Msa1008020:CDS | 55.0% | |
TTTGATCACGGTCGAGAGGC+TGG | + | chr7_1:7910185-7910204 | None:intergenic | 55.0% | |
GAAGCACGGACACTCCTCTC+TGG | - | chr7_1:7904472-7904491 | Msa1008020:CDS | 60.0% | |
CGGACACTCCTCTCTGGTGT+CGG | - | chr7_1:7904478-7904497 | Msa1008020:CDS | 60.0% | |
GCACATGTCCGACACCAGAG+AGG | + | chr7_1:7904489-7904508 | None:intergenic | 60.0% | |
! | TTGTGTCGGCGTGTCAGTGC+CGG | - | chr7_1:7904567-7904586 | Msa1008020:CDS | 60.0% |
!! | TCCCACTTGGGTTGGCCTGA+TGG | + | chr7_1:7905008-7905027 | None:intergenic | 60.0% |
AGGCCAACCCAAGTGGGACT+TGG | - | chr7_1:7905010-7905029 | Msa1008020:CDS | 60.0% | |
TGAGGTACAGCGGTTGACGG+TGG | - | chr7_1:7905191-7905210 | Msa1008020:CDS | 60.0% | |
GAGGTACAGCGGTTGACGGT+GGG | - | chr7_1:7905192-7905211 | Msa1008020:CDS | 60.0% | |
AGCGGTTGACGGTGGGACTT+GGG | - | chr7_1:7905199-7905218 | Msa1008020:CDS | 60.0% | |
GGCGATAGTTTCATCGCCGG+AGG | - | chr7_1:7905282-7905301 | Msa1008020:CDS | 60.0% | |
GCTTCCCGAATCGTTGGTCC+TGG | + | chr7_1:7906051-7906070 | None:intergenic | 60.0% | |
CCAGGCTCACCAATCAGCAC+GGG | + | chr7_1:7906671-7906690 | None:intergenic | 60.0% | |
! | GGGGCACCACCTGGATATGT+TGG | - | chr7_1:7909820-7909839 | Msa1008020:CDS | 60.0% |
AGGTCTGCGGCGAACTGTCT+CGG | + | chr7_1:7909869-7909888 | None:intergenic | 60.0% | |
GGATGGCAGCATCTGTCACC+TGG | + | chr7_1:7910643-7910662 | None:intergenic | 60.0% | |
CAGCGGTTGACGGTGGGACT+TGG | - | chr7_1:7905198-7905217 | Msa1008020:CDS | 65.0% | |
GCGGTTGACGGTGGGACTTG+GGG | - | chr7_1:7905200-7905219 | Msa1008020:CDS | 65.0% | |
!! | CCCGTGCTGATTGGTGAGCC+TGG | - | chr7_1:7906668-7906687 | Msa1008020:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_1 | gene | 7904074 | 7911157 | 7904074 | ID=Msa1008020;Name=Msa1008020 |
chr7_1 | mRNA | 7904074 | 7911157 | 7904074 | ID=Msa1008020-mRNA-1;Parent=Msa1008020;Name=Msa1008020-mRNA-1;_AED=0.12;_eAED=0.12;_QI=128|1|1|1|1|1|10|232|978 |
chr7_1 | exon | 7904074 | 7904635 | 7904074 | ID=Msa1008020-mRNA-1:exon:2418;Parent=Msa1008020-mRNA-1 |
chr7_1 | exon | 7905004 | 7905930 | 7905004 | ID=Msa1008020-mRNA-1:exon:2417;Parent=Msa1008020-mRNA-1 |
chr7_1 | exon | 7906132 | 7906397 | 7906132 | ID=Msa1008020-mRNA-1:exon:2416;Parent=Msa1008020-mRNA-1 |
chr7_1 | exon | 7906969 | 7907277 | 7906969 | ID=Msa1008020-mRNA-1:exon:2415;Parent=Msa1008020-mRNA-1 |
chr7_1 | exon | 7907556 | 7907706 | 7907556 | ID=Msa1008020-mRNA-1:exon:2414;Parent=Msa1008020-mRNA-1 |
chr7_1 | exon | 7907925 | 7907979 | 7907925 | ID=Msa1008020-mRNA-1:exon:2413;Parent=Msa1008020-mRNA-1 |
chr7_1 | exon | 7908514 | 7908709 | 7908514 | ID=Msa1008020-mRNA-1:exon:2412;Parent=Msa1008020-mRNA-1 |
chr7_1 | exon | 7909074 | 7909311 | 7909074 | ID=Msa1008020-mRNA-1:exon:2411;Parent=Msa1008020-mRNA-1 |
chr7_1 | exon | 7909766 | 7909984 | 7909766 | ID=Msa1008020-mRNA-1:exon:2410;Parent=Msa1008020-mRNA-1 |
chr7_1 | exon | 7910784 | 7911157 | 7910784 | ID=Msa1008020-mRNA-1:exon:2409;Parent=Msa1008020-mRNA-1 |
chr7_1 | five_prime_UTR | 7911030 | 7911157 | 7911030 | ID=Msa1008020-mRNA-1:five_prime_utr;Parent=Msa1008020-mRNA-1 |
chr7_1 | CDS | 7910784 | 7911029 | 7910784 | ID=Msa1008020-mRNA-1:cds;Parent=Msa1008020-mRNA-1 |
chr7_1 | CDS | 7909766 | 7909984 | 7909766 | ID=Msa1008020-mRNA-1:cds;Parent=Msa1008020-mRNA-1 |
chr7_1 | CDS | 7909074 | 7909311 | 7909074 | ID=Msa1008020-mRNA-1:cds;Parent=Msa1008020-mRNA-1 |
chr7_1 | CDS | 7908514 | 7908709 | 7908514 | ID=Msa1008020-mRNA-1:cds;Parent=Msa1008020-mRNA-1 |
chr7_1 | CDS | 7907925 | 7907979 | 7907925 | ID=Msa1008020-mRNA-1:cds;Parent=Msa1008020-mRNA-1 |
chr7_1 | CDS | 7907556 | 7907706 | 7907556 | ID=Msa1008020-mRNA-1:cds;Parent=Msa1008020-mRNA-1 |
chr7_1 | CDS | 7906969 | 7907277 | 7906969 | ID=Msa1008020-mRNA-1:cds;Parent=Msa1008020-mRNA-1 |
chr7_1 | CDS | 7906132 | 7906397 | 7906132 | ID=Msa1008020-mRNA-1:cds;Parent=Msa1008020-mRNA-1 |
chr7_1 | CDS | 7905004 | 7905930 | 7905004 | ID=Msa1008020-mRNA-1:cds;Parent=Msa1008020-mRNA-1 |
chr7_1 | CDS | 7904306 | 7904635 | 7904306 | ID=Msa1008020-mRNA-1:cds;Parent=Msa1008020-mRNA-1 |
chr7_1 | three_prime_UTR | 7904074 | 7904305 | 7904074 | ID=Msa1008020-mRNA-1:three_prime_utr;Parent=Msa1008020-mRNA-1 |
Gene Sequence |
Protein sequence |