AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1008090

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1008090 MtrunA17_Chr7g0218421 97.449 196 5 0 19 214 758 953 3.07e-131 392
Msa1008090 MtrunA17_Chr6g0454071 88.776 196 22 0 19 214 754 949 3.78e-120 363
Msa1008090 MtrunA17_Chr3g0137071 61.780 191 72 1 22 211 769 959 4.74e-78 252
Msa1008090 MtrunA17_Chr4g0061371 45.055 182 96 1 19 200 676 853 3.58e-51 177
Msa1008090 MtrunA17_Chr7g0225161 44.693 179 94 2 22 200 679 852 1.27e-46 164
Msa1008090 MtrunA17_Chr3g0131711 44.444 189 99 1 19 201 710 898 1.58e-46 164
Msa1008090 MtrunA17_Chr3g0131351 42.857 203 99 4 22 212 760 957 4.23e-46 162
Msa1008090 MtrunA17_Chr8g0385811 43.915 189 100 1 19 201 714 902 5.24e-46 162
Msa1008090 MtrunA17_Chr3g0134631 41.627 209 107 2 19 212 715 923 5.30e-46 162
Msa1008090 MtrunA17_Chr3g0102771 45.055 182 89 3 22 199 598 772 1.64e-43 155
Msa1008090 MtrunA17_Chr2g0329561 36.264 182 112 1 19 200 271 448 7.26e-36 131
Msa1008090 MtrunA17_Chr2g0277781 38.889 162 94 2 22 182 133 290 7.31e-35 125
Msa1008090 MtrunA17_Chr2g0277771 33.094 139 84 2 63 201 1 130 1.07e-23 93.2
Msa1008090 MtrunA17_Chr3g0135231 52.564 78 33 1 43 120 569 642 6.15e-18 81.6
Msa1008090 MtrunA17_Chr1g0188061 78.378 37 8 0 23 59 281 317 1.54e-12 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1008090 AT5G15450.1 83.673 196 31 1 19 214 752 946 1.46e-111 341
Msa1008090 AT2G25140.1 62.632 190 69 2 22 210 760 948 1.55e-76 248
Msa1008090 AT1G74310.1 46.703 182 93 1 19 200 673 850 1.77e-51 178
Msa1008090 AT5G50920.1 45.161 186 96 1 22 201 715 900 1.72e-46 164
Msa1008090 AT3G48870.2 44.560 193 99 2 15 201 700 890 2.17e-46 164
Msa1008090 AT3G48870.1 44.560 193 99 2 15 201 731 921 2.34e-46 164
Msa1008090 AT3G48870.4 44.560 193 99 2 15 201 731 921 2.34e-46 164
Msa1008090 AT3G48870.3 44.560 193 99 2 15 201 731 921 2.34e-46 164
Msa1008090 AT5G51070.1 42.021 188 94 2 22 198 734 917 1.21e-45 162
Msa1008090 AT1G74310.2 49.306 144 69 1 19 162 673 812 8.49e-41 147
Msa1008090 AT4G14675.1 23.913 138 69 2 63 200 1 102 7.63e-11 58.9

Find 244 sgRNAs with CRISPR-Local

Find 539 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGAATCCCCGTATTCTTTC+TGG 0.132878 7_1:+8029244 None:intergenic
AGAAAGTTTGTTTGATTTAA+TGG 0.135817 7_1:+8030903 None:intergenic
AATTGCTAGCTTCATGTTTA+TGG 0.140008 7_1:-8024552 Msa1008090:five_prime_UTR
ATCCATTACCCGCTGCTTTA+TGG 0.149238 7_1:+8024123 None:intergenic
GTCTCTCCATCTCTAGTTTC+AGG 0.249969 7_1:+8025295 None:intergenic
GGAGAAGTTGTTGTATTTAG+AGG 0.254015 7_1:-8024675 Msa1008090:five_prime_UTR
TCAGTTGAGCACTTGGTTCT+TGG 0.255582 7_1:-8029216 Msa1008090:five_prime_UTR
TCAGCTTATATCCCTTGATA+TGG 0.263413 7_1:-8026561 Msa1008090:intron
ACTGGCCTAGCTCCATAGTT+AGG 0.268814 7_1:+8023529 None:intergenic
TCATCATCTCTTCCTATAAC+TGG 0.274586 7_1:+8028647 None:intergenic
TAGTAGCATTGTCAGGTTAC+AGG 0.278980 7_1:-8024017 Msa1008090:intron
TTCAATGTTGGGGCGCGATT+TGG 0.285714 7_1:-8029295 Msa1008090:five_prime_UTR
TTTCAATTATGTTAGGTGAT+AGG 0.297339 7_1:-8029330 Msa1008090:intron
GTTTCTTCTGTTGAAGGAAA+TGG 0.300185 7_1:+8031004 None:intergenic
CATGCAGTTTCAAGATTGAT+TGG 0.304691 7_1:-8024422 Msa1008090:five_prime_UTR
GGCGGCTGCCAAACTGAAAA+TGG 0.306116 7_1:-8025364 Msa1008090:five_prime_UTR
ATTGCTAGCTTCATGTTTAT+GGG 0.310962 7_1:-8024551 Msa1008090:five_prime_UTR
TCAAATTACAGCTATTGATT+TGG 0.314843 7_1:-8025394 Msa1008090:intron
GATGCTGCCATCCAACTTCT+TGG 0.315240 7_1:-8023568 Msa1008090:CDS
TACTGACTGGCGTCCCCTAA+TGG 0.317109 7_1:+8029110 None:intergenic
AATCTGCAATAGAGTCCATT+AGG 0.321183 7_1:-8029125 Msa1008090:five_prime_UTR
CCGCTGCTTTATGGTTTCAT+AGG 0.325986 7_1:+8024132 None:intergenic
TCAATATATTTACAATGCTT+TGG 0.334451 7_1:+8023174 None:intergenic
TTCAATTATGTTAGGTGATA+GGG 0.337711 7_1:-8029329 Msa1008090:intron
ATCTGCAATAGAGTCCATTA+GGG 0.339355 7_1:-8029124 Msa1008090:five_prime_UTR
GATATGGGTGCACTTATTGC+TGG 0.342377 7_1:-8026545 Msa1008090:five_prime_UTR
ATGCTAAGAGAAGAAGTAAC+AGG 0.344894 7_1:-8024767 Msa1008090:five_prime_UTR
GGGATTGTTCTTTGTTCTCC+TGG 0.345942 7_1:+8028598 None:intergenic
GAATCAGCTGGTTCAATGTT+GGG 0.347322 7_1:-8029306 Msa1008090:five_prime_UTR
GAAGGAAATGGGAGTTGAAT+AGG 0.348408 7_1:+8031016 None:intergenic
CAAACAAACTTTCTTGCAAA+TGG 0.351917 7_1:-8030894 Msa1008090:five_prime_UTR
CGTTGTGAAGCTTCTTCAAC+TGG 0.358044 7_1:-8030831 Msa1008090:five_prime_UTR
ATCTAGTATGCTGAGAAATA+TGG 0.364021 7_1:+8023274 None:intergenic
GGAAAGCTTGATCCAGTTAT+AGG 0.365678 7_1:-8028659 Msa1008090:five_prime_UTR
TTCCATCATCTAAAATTTGA+AGG 0.372126 7_1:+8024275 None:intergenic
CGCGCTGCTGAATTAAAGTA+TGG 0.372429 7_1:-8024866 Msa1008090:five_prime_UTR
AGCACTGTTTCTTCTGTTGA+AGG 0.380917 7_1:+8030998 None:intergenic
GAAGCTTCTTCAACTGGAAC+TGG 0.384641 7_1:-8030825 Msa1008090:five_prime_UTR
ATGAGATTCATACAGTTGTT+GGG 0.390769 7_1:-8026433 Msa1008090:five_prime_UTR
AAGATACCATTTCAATACTA+AGG 0.391110 7_1:-8025960 Msa1008090:five_prime_UTR
TTTCTTCTGTTGAAGGAAAT+GGG 0.395933 7_1:+8031005 None:intergenic
AAGCTTGTGAAGAATGTTCC+AGG 0.399019 7_1:+8023321 None:intergenic
GTTTCATAGGCTAATTCCTT+AGG 0.399438 7_1:+8024145 None:intergenic
CGCAGGATCTTTACCAAGGT+TGG 0.401353 7_1:-8029865 Msa1008090:five_prime_UTR
CCATCACTGAACTGAATTGA+AGG 0.401590 7_1:+8031063 None:intergenic
AATGCTTCATACTTCCCTTC+AGG 0.404209 7_1:+8028722 None:intergenic
ATGCAGTTTCAAGATTGATT+GGG 0.406838 7_1:-8024421 Msa1008090:five_prime_UTR
CAGCTTATATCCCTTGATAT+GGG 0.407406 7_1:-8026560 Msa1008090:five_prime_UTR
AATGTTGGGGCGCGATTTGG+AGG 0.408644 7_1:-8029292 Msa1008090:five_prime_UTR
ATTTGTTTCAGTTGAGCACT+TGG 0.413239 7_1:-8029223 Msa1008090:five_prime_UTR
GATGAGATTCATACAGTTGT+TGG 0.413936 7_1:-8026434 Msa1008090:five_prime_UTR
CTATTGAGTATATATGAGTA+TGG 0.416304 7_1:-8023085 Msa1008090:three_prime_UTR
TTTATCCAGGACCAACGATT+CGG 0.419513 7_1:-8029192 Msa1008090:five_prime_UTR
GCAGTAGAAAGCATTCATTC+AGG 0.419600 7_1:+8023298 None:intergenic
GTTGGTCAACATAAACTTGT+TGG 0.422340 7_1:+8025992 None:intergenic
ATCCTAAGCTTCCAAGAAGT+TGG 0.422927 7_1:+8023557 None:intergenic
TATTCGTATTAATCAATAGA+TGG 0.426435 7_1:+8023227 None:intergenic
CTCCGAGCATAGGCTTTAAG+AGG 0.427447 7_1:+8026099 None:intergenic
AAGTTAAAGTTACCTTTGTC+AGG 0.430696 7_1:+8025832 None:intergenic
GGAATCAGCTGGTTCAATGT+TGG 0.434701 7_1:-8029307 Msa1008090:five_prime_UTR
TTTGATCACGGTCGAGAGGC+TGG 0.435919 7_1:+8024041 None:intergenic
AGTATTGTCCACTCCAACCT+TGG 0.439266 7_1:+8029852 None:intergenic
TTAGGATATGACCCTAACTA+TGG 0.439348 7_1:-8023541 Msa1008090:CDS
TTCATGTTTATGGGGCCTAC+AGG 0.444724 7_1:-8024542 Msa1008090:five_prime_UTR
GCACTTGATGAAGGCTCTGT+TGG 0.445163 7_1:-8029908 Msa1008090:five_prime_UTR
ATCCAACTTCTTGGAAGCTT+AGG 0.446196 7_1:-8023559 Msa1008090:CDS
TTATCCAGGACCAACGATTC+GGG 0.446951 7_1:-8029191 Msa1008090:five_prime_UTR
ACTCAATAGTAATATTATCA+TGG 0.447655 7_1:+8023099 None:intergenic
TTGTTCTCTTTCGCCACCTC+CGG 0.448192 7_1:+8029952 None:intergenic
ATCAAACAAATAACAGCATA+AGG 0.448593 7_1:+8024336 None:intergenic
AGGGATTGATTCAGAGAGCC+AGG 0.449669 7_1:-8029272 Msa1008090:five_prime_UTR
AACCATAAAGCAGCGGGTAA+TGG 0.450765 7_1:-8024125 Msa1008090:CDS
CAGACAAGGCTTCTAAAGAT+AGG 0.451792 7_1:-8025254 Msa1008090:five_prime_UTR
CCTTCAATTCAGTTCAGTGA+TGG 0.452516 7_1:-8031063 Msa1008090:five_prime_UTR
CAAGTGCACTATCAGAAATT+CGG 0.455304 7_1:+8025902 None:intergenic
ATCAAATTAGTAGCATTGTC+AGG 0.457196 7_1:-8024024 Msa1008090:CDS
CAGTCCCCTTAGTATTGAAA+TGG 0.458099 7_1:+8025954 None:intergenic
CATAAACTCGGGGCGAAAGA+TGG 0.462970 7_1:+8024090 None:intergenic
TTATTGCTGGAGCAAAATAC+CGG 0.462988 7_1:-8026532 Msa1008090:five_prime_UTR
ATCTACACCGCAAGAAAGCC+TGG 0.463020 7_1:-8023339 Msa1008090:three_prime_UTR
TATGAATCTCATCAATGAAA+AGG 0.463311 7_1:+8026444 None:intergenic
ATAAACATGAAGCTAGCAAT+TGG 0.464537 7_1:+8024554 None:intergenic
GTACTTCATAAGCGTGTTGT+AGG 0.464753 7_1:-8024650 Msa1008090:five_prime_UTR
TTTGAGTGAAACGCGTTTGG+CGG 0.465591 7_1:+8030935 None:intergenic
AGCCTCGGCTACTGCTTTAA+CGG 0.470021 7_1:+8024616 None:intergenic
AAGAGTTCACAGAGATGGCC+TGG 0.471804 7_1:-8029993 Msa1008090:five_prime_UTR
AAGAACAATCCCGTGCTGAT+TGG 0.472297 7_1:-8028587 Msa1008090:five_prime_UTR
CAATAAGTGCACCCATATCA+AGG 0.472462 7_1:+8026549 None:intergenic
CGCATGTTAGGTGCTACAAA+TGG 0.473383 7_1:-8026140 Msa1008090:intron
AGGGACTTCCAGAAAGAATA+CGG 0.476681 7_1:-8029252 Msa1008090:five_prime_UTR
TGATTTGAGTGAAACGCGTT+TGG 0.477017 7_1:+8030932 None:intergenic
TTAGATGAATATATGAACTC+TGG 0.478286 7_1:-8024797 Msa1008090:five_prime_UTR
ACCGGGGAGAATTCGAAGAT+AGG 0.484794 7_1:-8026514 Msa1008090:five_prime_UTR
TTGCTGTGGAAGTTGATTGT+TGG 0.487429 7_1:+8023396 None:intergenic
ATCATTATGACCTCAAATGT+TGG 0.489004 7_1:-8024205 Msa1008090:CDS
AGATTGATTGGGGCACCACC+TGG 0.490582 7_1:-8024410 Msa1008090:five_prime_UTR
TGGAAACGACGCTCTAGTGC+TGG 0.490765 7_1:+8026012 None:intergenic
CTGCACTTGATGAGATCAAC+CGG 0.491334 7_1:-8025323 Msa1008090:five_prime_UTR
AGGTCTGCGGCGAACTGTCT+CGG 0.491652 7_1:+8024356 None:intergenic
CCCGTGCTGATTGGTGAGCC+TGG 0.493530 7_1:-8028578 Msa1008090:five_prime_UTR
AGAGGAGAGCTGCGATGCAT+TGG 0.493653 7_1:-8026078 Msa1008090:five_prime_UTR
TTCAATACTAAGGGGACTGC+GGG 0.494187 7_1:-8025950 Msa1008090:five_prime_UTR
GCTTCCCGAATCGTTGGTCC+TGG 0.496949 7_1:+8029187 None:intergenic
GGGGCACCACCTGGATATGT+TGG 0.499520 7_1:-8024401 Msa1008090:exon
TCTTCGTACCCAACATATCC+AGG 0.500478 7_1:+8024392 None:intergenic
GTTGTCGTTGCAATGAGTTA+AGG 0.500716 7_1:+8024840 None:intergenic
GGATGATGACACGGCACCTA+AGG 0.505024 7_1:-8024161 Msa1008090:CDS
AATTGATATGAGTGAGTACA+TGG 0.507053 7_1:-8024450 Msa1008090:five_prime_UTR
TTCTCCTCTCAGAATACCCT+TGG 0.507087 7_1:+8023468 None:intergenic
AGATGAAACTATCGCCTGCC+AGG 0.507244 7_1:+8029975 None:intergenic
AAGGAAATGGGAGTTGAATA+GGG 0.507263 7_1:+8031017 None:intergenic
AGCTATTGATTTGGTTGATG+AGG 0.507929 7_1:-8025385 Msa1008090:five_prime_UTR
GCTATCCAACGTTCAAGAGC+AGG 0.508885 7_1:-8024596 Msa1008090:five_prime_UTR
TACTAAGGGGACTGCGGGAA+AGG 0.511273 7_1:-8025945 Msa1008090:five_prime_UTR
TGAAGGGAAGTATGAAGCAT+TGG 0.512318 7_1:-8028720 Msa1008090:five_prime_UTR
GGGCACCACCTGGATATGTT+GGG 0.512796 7_1:-8024400 Msa1008090:exon
ATTCATACAGTTGTTGGGGC+AGG 0.513625 7_1:-8026428 Msa1008090:intron
GGATGGCAGCATCTGTCACC+TGG 0.517832 7_1:+8023578 None:intergenic
AGATCGCAAGATGAAAATCC+AGG 0.518725 7_1:-8023596 Msa1008090:CDS
TTGCTAGCTTCATGTTTATG+GGG 0.518821 7_1:-8024550 Msa1008090:five_prime_UTR
CTGGCCTAGCTCCATAGTTA+GGG 0.521595 7_1:+8023530 None:intergenic
GGTCATAATGATAACAGTAT+TGG 0.522391 7_1:+8024216 None:intergenic
GTTCACAGAGATGGCCTGGC+AGG 0.523122 7_1:-8029989 Msa1008090:five_prime_UTR
GTATTCTTTCTGGAAGTCCC+TGG 0.524762 7_1:+8029254 None:intergenic
AGAAGAATGGTCTTGCTCGC+AGG 0.525465 7_1:-8029882 Msa1008090:five_prime_UTR
GGCTGAGCTGACTGAACAGT+GGG 0.526080 7_1:-8025187 Msa1008090:five_prime_UTR
GCTCTGTTGGAGCAGAAGAA+TGG 0.529398 7_1:-8029895 Msa1008090:five_prime_UTR
TCGGCTACTGCTTTAACGGC+AGG 0.531031 7_1:+8024620 None:intergenic
CTCAATAGTAATATTATCAT+GGG 0.531235 7_1:+8023100 None:intergenic
TACCTTGGTCAATTACTGAC+TGG 0.535710 7_1:+8029097 None:intergenic
TCAACTCTATTCATAAACTC+GGG 0.537745 7_1:+8024079 None:intergenic
AGATACCATTTCAATACTAA+GGG 0.538230 7_1:-8025959 Msa1008090:five_prime_UTR
CAGCTCTCCTCTCCGAGCAT+AGG 0.540251 7_1:+8026089 None:intergenic
AATTTCTGATAGTGCACTTG+TGG 0.540294 7_1:-8025899 Msa1008090:five_prime_UTR
CATACTCTCGCTCAGCCTGT+TGG 0.540749 7_1:+8024897 None:intergenic
TGGAAGAGTAACTGACTCAC+AGG 0.542940 7_1:-8024257 Msa1008090:CDS
GCCTATCTTCGAATTCTCCC+CGG 0.544146 7_1:+8026513 None:intergenic
GAAATGGTATCTTCAACAGT+AGG 0.545265 7_1:+8025970 None:intergenic
TTGCTGAAATTGTAAGCAAG+TGG 0.546977 7_1:-8024736 Msa1008090:five_prime_UTR
TAGATGAATATATGAACTCT+GGG 0.548569 7_1:-8024796 Msa1008090:five_prime_UTR
TCAATTATGTTAGGTGATAG+GGG 0.550533 7_1:-8029328 Msa1008090:intron
TGGGAAAGATTTGACAGCAA+TGG 0.550905 7_1:-8028690 Msa1008090:five_prime_UTR
CTATGAAACCATAAAGCAGC+GGG 0.552881 7_1:-8024131 Msa1008090:CDS
TCTTGAACGTTGGATAGCCT+CGG 0.554206 7_1:+8024601 None:intergenic
TGCAGTTTCAAGATTGATTG+GGG 0.555464 7_1:-8024420 Msa1008090:five_prime_UTR
ACAAATGGTGCTATGGATGC+TGG 0.556016 7_1:-8026125 Msa1008090:five_prime_UTR
CTGATTGGTGAGCCTGGTGT+TGG 0.556965 7_1:-8028572 Msa1008090:five_prime_UTR
TTTATGGGGCCTACAGGTGT+AGG 0.558111 7_1:-8024536 Msa1008090:five_prime_UTR
AGAGTTGCTTCCCGAATCGT+TGG 0.558606 7_1:+8029181 None:intergenic
AGTGAACGTTGAGATCCAAC+AGG 0.559442 7_1:-8024912 Msa1008090:five_prime_UTR
CAACAACACTTGATGAGTAT+CGG 0.559927 7_1:-8026053 Msa1008090:five_prime_UTR
GGTGCATTCAAATTCTCTCC+AGG 0.560236 7_1:-8028616 Msa1008090:five_prime_UTR
GTTCGTTTAGTCAATTCTGA+AGG 0.562174 7_1:+8023122 None:intergenic
GATCTTTACCAAGGTTGGAG+TGG 0.562623 7_1:-8029860 Msa1008090:five_prime_UTR
GCAGGCGATAGTTTCATCTC+CGG 0.563091 7_1:-8029971 Msa1008090:five_prime_UTR
AAAGACCTGCTCTTGAACGT+TGG 0.563977 7_1:+8024591 None:intergenic
CAAAACTTCAACAATCAGAG+AGG 0.565499 7_1:-8024697 Msa1008090:five_prime_UTR
ATCAACTCTATTCATAAACT+CGG 0.565760 7_1:+8024078 None:intergenic
GTACTGCGATCCAACATTTG+AGG 0.565812 7_1:+8024195 None:intergenic
TGTGGAAGCTGCAATTCTCT+CGG 0.566711 7_1:-8025881 Msa1008090:five_prime_UTR
TTTGTTTGATGAGATTGAGA+AGG 0.567295 7_1:-8024323 Msa1008090:CDS
ATATTTGTCATAGATCCTGA+AGG 0.568016 7_1:-8028737 Msa1008090:intron
GTTCATTCAGCGGCAACCCA+AGG 0.570005 7_1:-8029806 Msa1008090:intron
TTGACAGCAATGGCTAAAGC+AGG 0.570459 7_1:-8028680 Msa1008090:five_prime_UTR
GAAAGGTATGAGCTACATCA+TGG 0.572182 7_1:-8025928 Msa1008090:five_prime_UTR
GGGACTTCCAGAAAGAATAC+GGG 0.572701 7_1:-8029251 Msa1008090:five_prime_UTR
TGTGGAGAATGAACTTGCCA+AGG 0.574061 7_1:-8023485 Msa1008090:CDS
AGAGAACAAGCATCAGATTG+TGG 0.577681 7_1:-8029938 Msa1008090:five_prime_UTR
CTTCTTCAACTGGAACTGGA+AGG 0.578359 7_1:-8030821 Msa1008090:five_prime_UTR
GATAGTTTCATCTCCGGAGG+TGG 0.578741 7_1:-8029965 Msa1008090:five_prime_UTR
AATCAGCTGGTTCAATGTTG+GGG 0.578949 7_1:-8029305 Msa1008090:five_prime_UTR
ATGTTGGGGCGCGATTTGGA+GGG 0.583323 7_1:-8029291 Msa1008090:five_prime_UTR
GGAAAGACTGCAATTTCTGA+AGG 0.583458 7_1:-8028551 Msa1008090:five_prime_UTR
GGAGACAGAGCACTTGATGA+AGG 0.584779 7_1:-8029917 Msa1008090:five_prime_UTR
TATTGCTGGAGCAAAATACC+GGG 0.585077 7_1:-8026531 Msa1008090:five_prime_UTR
TTGATCTCATCAAGTGCAGT+AGG 0.585262 7_1:+8025327 None:intergenic
AACCTCTTAAAGCCTATGCT+CGG 0.586044 7_1:-8026101 Msa1008090:five_prime_UTR
CTCTCGGATCGTTATATCAG+TGG 0.586806 7_1:-8025865 Msa1008090:five_prime_UTR
TGAGATTCATACAGTTGTTG+GGG 0.588813 7_1:-8026432 Msa1008090:five_prime_UTR
ACAATGCTTTGGAGTGACAA+AGG 0.588994 7_1:+8023185 None:intergenic
TCTCTAGTTTCAGGACCGAC+CGG 0.591761 7_1:+8025304 None:intergenic
AAAACTTCAACAATCAGAGA+GGG 0.591945 7_1:-8024696 Msa1008090:five_prime_UTR
GAGAGGAGAATTTAAAGATG+AGG 0.592198 7_1:-8023455 Msa1008090:CDS
TGCTCGCAGGATCTTTACCA+AGG 0.592880 7_1:-8029869 Msa1008090:five_prime_UTR
ATTGCAGTCTTTCCAACACC+AGG 0.594268 7_1:+8028560 None:intergenic
ATGACCCTAACTATGGAGCT+AGG 0.595289 7_1:-8023534 Msa1008090:CDS
AAGAGTGATTCAGCAAAATG+TGG 0.597514 7_1:-8023503 Msa1008090:CDS
GGATATGTTGGGTACGAAGA+GGG 0.597925 7_1:-8024389 Msa1008090:exon
TCTAAACACGGATGATGACA+CGG 0.598909 7_1:-8024170 Msa1008090:CDS
TTCTTCAACTGGAACTGGAA+GGG 0.599932 7_1:-8030820 Msa1008090:intron
ACCAGGCTCACCAATCAGCA+CGG 0.601973 7_1:+8028577 None:intergenic
GAATGTTCCAGGCTTTCTTG+CGG 0.603132 7_1:+8023332 None:intergenic
AGGTGCTACAAATGGTGCTA+TGG 0.604860 7_1:-8026132 Msa1008090:five_prime_UTR
TAAGCTTCCAAGAAGTTGGA+TGG 0.608541 7_1:+8023561 None:intergenic
GGCGATAGTTTCATCTCCGG+AGG 0.611966 7_1:-8029968 Msa1008090:five_prime_UTR
CAATGCTACTAATTTGATCA+CGG 0.613164 7_1:+8024029 None:intergenic
CCAGGCTCACCAATCAGCAC+GGG 0.614081 7_1:+8028578 None:intergenic
TGGTATCTTCAACAGTAGGT+TGG 0.614407 7_1:+8025974 None:intergenic
CTACGGTTCATCAAAGCTTG+AGG 0.615149 7_1:+8026795 None:intergenic
AAAGAAGTAACAGAATCTGA+TGG 0.615929 7_1:-8026476 Msa1008090:five_prime_UTR
CTAATTTGATCACGGTCGAG+AGG 0.615964 7_1:+8024037 None:intergenic
TATTTGTCATAGATCCTGAA+GGG 0.619425 7_1:-8028736 Msa1008090:intron
GAAATTGTAAGCAAGTGGAC+CGG 0.621826 7_1:-8024731 Msa1008090:five_prime_UTR
ACAGCAAGAGTTCACAGAGA+TGG 0.624210 7_1:-8029998 Msa1008090:five_prime_UTR
GTCGGTCCTGAAACTAGAGA+TGG 0.626715 7_1:-8025301 Msa1008090:five_prime_UTR
AATAAGTGCACCCATATCAA+GGG 0.630311 7_1:+8026550 None:intergenic
TATTGATTTGGTTGATGAGG+CGG 0.632745 7_1:-8025382 Msa1008090:five_prime_UTR
GAAAGACTGCAATTTCTGAA+GGG 0.637681 7_1:-8028550 Msa1008090:intron
AAGCTAGCAATTGGACGATG+AGG 0.640920 7_1:+8024563 None:intergenic
TGCTAAGAGAAGAAGTAACA+GGG 0.642164 7_1:-8024766 Msa1008090:five_prime_UTR
TCGACTTCAATCAATCAAAG+AGG 0.642516 7_1:-8025142 Msa1008090:five_prime_UTR
TGGATATGTTGGGTACGAAG+AGG 0.643408 7_1:-8024390 Msa1008090:exon
TTCTTCTGTATTGAACATGT+AGG 0.647488 7_1:+8024484 None:intergenic
GGGATTGATTCAGAGAGCCA+GGG 0.649232 7_1:-8029271 Msa1008090:five_prime_UTR
AGATAGGTTAAATCGTCTTG+AGG 0.650620 7_1:-8025238 Msa1008090:five_prime_UTR
GTGGAGAATGAACTTGCCAA+GGG 0.652332 7_1:-8023484 Msa1008090:CDS
AGGCTGAGCTGACTGAACAG+TGG 0.654785 7_1:-8025188 Msa1008090:five_prime_UTR
ACTTCAATCAATCAAAGAGG+AGG 0.655489 7_1:-8025139 Msa1008090:intron
TTTCAATACTAAGGGGACTG+CGG 0.656692 7_1:-8025951 Msa1008090:five_prime_UTR
CAACTCTATTCATAAACTCG+GGG 0.656776 7_1:+8024080 None:intergenic
GTATCGGAAGTATATCGAGA+AGG 0.658772 7_1:-8026037 Msa1008090:five_prime_UTR
TGCCGTTAAAGCAGTAGCCG+AGG 0.661781 7_1:-8024618 Msa1008090:five_prime_UTR
GCAACGACAACTTGAGAGTG+CGG 0.664276 7_1:-8024828 Msa1008090:five_prime_UTR
CGCCAGTCAGTAATTGACCA+AGG 0.667722 7_1:-8029099 Msa1008090:intron
AAATAACAGCATAAGGTCTG+CGG 0.670615 7_1:+8024343 None:intergenic
TAGGTGATAGGGGAATCAGC+TGG 0.680311 7_1:-8029318 Msa1008090:five_prime_UTR
GAAGAGATGATGAAATACGC+AGG 0.680478 7_1:-8028637 Msa1008090:five_prime_UTR
CTTGCCAAGGGTATTCTGAG+AGG 0.680794 7_1:-8023472 Msa1008090:CDS
CGGAGAAAGAGAGAGAAACA+CGG 0.683168 7_1:+8030955 None:intergenic
GATACCATTTCAATACTAAG+GGG 0.685009 7_1:-8025958 Msa1008090:five_prime_UTR
TATGTTGGGTACGAAGAGGG+AGG 0.685768 7_1:-8024386 Msa1008090:CDS
CTTGCTCAGAGAATCGTGCA+AGG 0.687496 7_1:-8026825 Msa1008090:five_prime_UTR
CTTAAAGCCTATGCTCGGAG+AGG 0.687613 7_1:-8026096 Msa1008090:five_prime_UTR
CTACTGATAAGTTCATTCAG+CGG 0.698888 7_1:-8029816 Msa1008090:five_prime_UTR
ATCGCAGTACATTCTAAACA+CGG 0.699680 7_1:-8024182 Msa1008090:CDS
ACTTGATGAGATCAACCGGT+CGG 0.702875 7_1:-8025319 Msa1008090:five_prime_UTR
CCTATGAAACCATAAAGCAG+CGG 0.709298 7_1:-8024132 Msa1008090:CDS
GGAAGAGTAACTGACTCACA+GGG 0.729785 7_1:-8024256 Msa1008090:CDS
GGACTTCCAGAAAGAATACG+GGG 0.738647 7_1:-8029250 Msa1008090:five_prime_UTR
TCTGCAATAGAGTCCATTAG+GGG 0.738890 7_1:-8029123 Msa1008090:five_prime_UTR
TCTCACGAATGATACAGACA+AGG 0.745891 7_1:-8025268 Msa1008090:five_prime_UTR
ATTGCTGGAGCAAAATACCG+GGG 0.750246 7_1:-8026530 Msa1008090:five_prime_UTR
TCGTACCCAACATATCCAGG+TGG 0.765588 7_1:+8024395 None:intergenic
CATACTTTAATTCAGCAGCG+CGG 0.767240 7_1:+8024867 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATTAATTATTATTGTGT+CGG - chr7_1:8023564-8023583 Msa1008090:CDS 10.0%
!! AGCTTATTAAAAAAAAAAAA+TGG + chr7_1:8023912-8023931 None:intergenic 10.0%
!! TCAAACTTTATTAAAATTTA+TGG - chr7_1:8025915-8025934 Msa1008090:five_prime_UTR 10.0%
!! ATATCTATTAAAAATATGAT+GGG - chr7_1:8026047-8026066 Msa1008090:five_prime_UTR 10.0%
!!! AATAATTTAAAATGATAAGT+TGG - chr7_1:8027061-8027080 Msa1008090:intron 10.0%
!!! TAGTTTTAATGTAAATTTTA+GGG - chr7_1:8027598-8027617 Msa1008090:intron 10.0%
!! TAATTGAAACTTAATTAATT+AGG - chr7_1:8029250-8029269 Msa1008090:five_prime_UTR 10.0%
!!! AAATGAATTTTATTGATTAA+TGG - chr7_1:8029273-8029292 Msa1008090:five_prime_UTR 10.0%
!! TATATCAAAATTATGAATAT+CGG - chr7_1:8030342-8030361 Msa1008090:intron 10.0%
!! ACAACAAATTTATTGAATAA+TGG - chr7_1:8023871-8023890 Msa1008090:intron 15.0%
!!! AATTTGAACAATTTGTTATT+TGG - chr7_1:8025398-8025417 Msa1008090:intron 15.0%
!! GATATCTATTAAAAATATGA+TGG - chr7_1:8026046-8026065 Msa1008090:five_prime_UTR 15.0%
!! TTAAATTATTAATCACTGTT+TGG + chr7_1:8027051-8027070 None:intergenic 15.0%
!! ATATAATTATATAACCTGTT+TGG + chr7_1:8027312-8027331 None:intergenic 15.0%
!!! CTAGTTTTAATGTAAATTTT+AGG - chr7_1:8027597-8027616 Msa1008090:intron 15.0%
!!! GTTACTTTATAAATTCTATT+AGG + chr7_1:8028060-8028079 None:intergenic 15.0%
!!! TTAACTTGTTTAATTACAAA+AGG - chr7_1:8028440-8028459 Msa1008090:intron 15.0%
!! AAAAAAAAAAGTTCAAATCT+AGG + chr7_1:8028555-8028574 None:intergenic 15.0%
!!! TATACTTTTTTTAATACTGA+AGG - chr7_1:8029150-8029169 Msa1008090:five_prime_UTR 15.0%
!!! TTTTAAAAAAAAGTTCATGA+AGG + chr7_1:8030510-8030529 None:intergenic 15.0%
!! AATAAAATGTAGAAAAAGAT+AGG + chr7_1:8030610-8030629 None:intergenic 15.0%
!!! AGAAAGTTTGTTTGATTTAA+TGG + chr7_1:8023356-8023375 None:intergenic 20.0%
!! AATTAAACTTTGTGTATGTT+TGG - chr7_1:8023715-8023734 Msa1008090:intron 20.0%
!!! TTGAATGCTTAATTTTTTAC+TGG + chr7_1:8024062-8024081 None:intergenic 20.0%
!! ATTAAGTTATTTATCCAAAC+AGG + chr7_1:8024590-8024609 None:intergenic 20.0%
!!! GAAATTTAGAATGAAACAAA+TGG + chr7_1:8025195-8025214 None:intergenic 20.0%
!! TACAAAATAATATCACATAG+CGG - chr7_1:8025421-8025440 Msa1008090:intron 20.0%
!!! TTTTAAAACTTATCTAAACC+TGG - chr7_1:8025949-8025968 Msa1008090:five_prime_UTR 20.0%
!!! AAGATGATTTTTTAGTTGTT+TGG + chr7_1:8026958-8026977 None:intergenic 20.0%
!! TTAATATCATTGAAAAGAGA+GGG + chr7_1:8027127-8027146 None:intergenic 20.0%
!! TTTAATATCATTGAAAAGAG+AGG + chr7_1:8027128-8027147 None:intergenic 20.0%
!! AATTTACATTAAAACTAGAC+TGG + chr7_1:8027595-8027614 None:intergenic 20.0%
!! ATTGAAATTAAAACTTCTGA+AGG + chr7_1:8027653-8027672 None:intergenic 20.0%
!!! TTACCAAAATGTTGTTTAAT+CGG - chr7_1:8027993-8028012 Msa1008090:intron 20.0%
!! TAAACAAACTTACTTGTTTA+TGG - chr7_1:8028598-8028617 Msa1008090:five_prime_UTR 20.0%
!!! GAATTTTATTGATTAATGGT+CGG - chr7_1:8029277-8029296 Msa1008090:five_prime_UTR 20.0%
!!! TCAAATTTTGAAAAATGGAA+AGG + chr7_1:8030284-8030303 None:intergenic 20.0%
!!! AGTGATCAAATTTTGAAAAA+TGG + chr7_1:8030289-8030308 None:intergenic 20.0%
!! TATTCGTATTAATCAATAGA+TGG + chr7_1:8031032-8031051 None:intergenic 20.0%
!! TCAATATATTTACAATGCTT+TGG + chr7_1:8031085-8031104 None:intergenic 20.0%
!! CTCAATAGTAATATTATCAT+GGG + chr7_1:8031159-8031178 None:intergenic 20.0%
!! ACTCAATAGTAATATTATCA+TGG + chr7_1:8031160-8031179 None:intergenic 20.0%
!!! ATGGTATTGACTTATAATCT+GGG + chr7_1:8023998-8024017 None:intergenic 25.0%
! ACTTGTTCAAATGTAACAAA+TGG + chr7_1:8024480-8024499 None:intergenic 25.0%
! GAACAAGTTTGAATTGAAAT+AGG - chr7_1:8024492-8024511 Msa1008090:five_prime_UTR 25.0%
! TTTCAATTATGTTAGGTGAT+AGG - chr7_1:8024926-8024945 Msa1008090:intron 25.0%
! TTCAATTATGTTAGGTGATA+GGG - chr7_1:8024927-8024946 Msa1008090:intron 25.0%
!!! TATGAAGCATTGGAAAAATA+TGG - chr7_1:8025546-8025565 Msa1008090:intron 25.0%
!!! ATGAAGCATTGGAAAAATAT+GGG - chr7_1:8025547-8025566 Msa1008090:intron 25.0%
! AATCTTAGGGAATAGATATA+AGG + chr7_1:8025752-8025771 None:intergenic 25.0%
! TTATATCTATTCCCTAAGAT+TGG - chr7_1:8025751-8025770 Msa1008090:intron 25.0%
! TGGAAAATAATCCAATCTTA+GGG + chr7_1:8025765-8025784 None:intergenic 25.0%
! ATGGAAAATAATCCAATCTT+AGG + chr7_1:8025766-8025785 None:intergenic 25.0%
!! TTGTGCTGTTAAAATCTTAT+TGG - chr7_1:8025797-8025816 Msa1008090:intron 25.0%
! ACTTGCATTACTAGTATTTA+TGG + chr7_1:8025888-8025907 None:intergenic 25.0%
! ATATGATCTGCATGAAAATT+TGG - chr7_1:8026015-8026034 Msa1008090:five_prime_UTR 25.0%
! GTTTGTATCAAGAAACATTA+AGG - chr7_1:8026092-8026111 Msa1008090:five_prime_UTR 25.0%
! TAACACAATAACATAGCATA+GGG + chr7_1:8026286-8026305 None:intergenic 25.0%
! ATAACACAATAACATAGCAT+AGG + chr7_1:8026287-8026306 None:intergenic 25.0%
! GGAGTTGGAAATAAAAATAT+GGG + chr7_1:8026834-8026853 None:intergenic 25.0%
! TGGAGTTGGAAATAAAAATA+TGG + chr7_1:8026835-8026854 None:intergenic 25.0%
! AGTAAAAGGAAAGAATGTTT+AGG + chr7_1:8027012-8027031 None:intergenic 25.0%
! TTATATTACCTCAGATTACA+AGG + chr7_1:8027177-8027196 None:intergenic 25.0%
!! TTGTAATCTGAGGTAATATA+AGG - chr7_1:8027176-8027195 Msa1008090:intron 25.0%
!! GGATTGTCTCATAATTTTAT+TGG - chr7_1:8027283-8027302 Msa1008090:intron 25.0%
!! AATTTTATTGGAAACCAAAC+AGG - chr7_1:8027295-8027314 Msa1008090:intron 25.0%
!!! AAAAGAAGCATCCAAATTAT+GGG + chr7_1:8027344-8027363 None:intergenic 25.0%
!!! AAAAAGAAGCATCCAAATTA+TGG + chr7_1:8027345-8027364 None:intergenic 25.0%
! TATGAATCTCATCAATGAAA+AGG + chr7_1:8027815-8027834 None:intergenic 25.0%
!!! ATTTTCAGATAGCTGATTTT+GGG - chr7_1:8027875-8027894 Msa1008090:intron 25.0%
!! TTTCCGATTAAACAACATTT+TGG + chr7_1:8027999-8028018 None:intergenic 25.0%
!!! ATTATACTTTTTCGCATGTT+AGG - chr7_1:8028104-8028123 Msa1008090:intron 25.0%
! AAGATACCATTTCAATACTA+AGG - chr7_1:8028296-8028315 Msa1008090:intron 25.0%
! AGATACCATTTCAATACTAA+GGG - chr7_1:8028297-8028316 Msa1008090:intron 25.0%
! TAAGCAAATAATCTTGATAG+TGG + chr7_1:8028784-8028803 None:intergenic 25.0%
! ATTTGCTTAAAATCTCTTTC+TGG - chr7_1:8028795-8028814 Msa1008090:intron 25.0%
! TTTGCTTAAAATCTCTTTCT+GGG - chr7_1:8028796-8028815 Msa1008090:intron 25.0%
!! CTTATGAACATTATTGATTG+TGG + chr7_1:8028822-8028841 None:intergenic 25.0%
! CACAATCAATAATGTTCATA+AGG - chr7_1:8028820-8028839 Msa1008090:intron 25.0%
! ATCAATAGCTGTAATTTGAA+AGG + chr7_1:8028861-8028880 None:intergenic 25.0%
!! TCAAATTACAGCTATTGATT+TGG - chr7_1:8028862-8028881 Msa1008090:intron 25.0%
!!! CTCTCTTTTAAAAGATAAAC+AGG - chr7_1:8029048-8029067 Msa1008090:intron 25.0%
! GAAAAACTAGTGCAATTAAA+TGG - chr7_1:8029211-8029230 Msa1008090:five_prime_UTR 25.0%
!!! TGCAATTAAATGGATTGATT+TGG - chr7_1:8029221-8029240 Msa1008090:five_prime_UTR 25.0%
! TTAGATGAATATATGAACTC+TGG - chr7_1:8029459-8029478 Msa1008090:intron 25.0%
! TAGATGAATATATGAACTCT+GGG - chr7_1:8029460-8029479 Msa1008090:intron 25.0%
! ATCAAACAAATAACAGCATA+AGG + chr7_1:8029923-8029942 None:intergenic 25.0%
!! TTCCTTCAAATTTTAGATGA+TGG - chr7_1:8029979-8029998 Msa1008090:five_prime_UTR 25.0%
!! TTCCATCATCTAAAATTTGA+AGG + chr7_1:8029984-8030003 None:intergenic 25.0%
! ATCAACTCTATTCATAAACT+CGG + chr7_1:8030181-8030200 None:intergenic 25.0%
! TCGACAATCAATATGTATAT+TGG + chr7_1:8030312-8030331 None:intergenic 25.0%
!! TTTCTACATTTTATTGCAGT+TGG - chr7_1:8030615-8030634 Msa1008090:intron 25.0%
! CTATTGAGTATATATGAGTA+TGG - chr7_1:8031171-8031190 Msa1008090:five_prime_UTR 25.0%
TTTCTTCTGTTGAAGGAAAT+GGG + chr7_1:8023254-8023273 None:intergenic 30.0%
CAAACAAACTTTCTTGCAAA+TGG - chr7_1:8023362-8023381 Msa1008090:three_prime_UTR 30.0%
TAAAGTGAATCTATGAAGCA+CGG - chr7_1:8023468-8023487 Msa1008090:CDS 30.0%
TGCTTCTATTCTAATTAGTC+TGG + chr7_1:8023696-8023715 None:intergenic 30.0%
! TGAATAATGGAAAGTGACTT+AGG - chr7_1:8023884-8023903 Msa1008090:intron 30.0%
!! GATGGTATTGACTTATAATC+TGG + chr7_1:8023999-8024018 None:intergenic 30.0%
GATTATAAGTCAATACCATC+AGG - chr7_1:8023999-8024018 Msa1008090:intron 30.0%
TTTACTGGTAAGTGATTAAG+TGG + chr7_1:8024047-8024066 None:intergenic 30.0%
!! TCATTAATTTGCTAACCACA+TGG - chr7_1:8024101-8024120 Msa1008090:CDS 30.0%
!!! GGTTTTGAATTTTGATGCAA+TGG - chr7_1:8024227-8024246 Msa1008090:CDS 30.0%
TACATAAGCACTTTCATGAT+AGG + chr7_1:8024633-8024652 None:intergenic 30.0%
! TAAGTGATTGTGAGTTTGTT+CGG + chr7_1:8024801-8024820 None:intergenic 30.0%
AACAAACTCACAATCACTTA+TGG - chr7_1:8024801-8024820 Msa1008090:five_prime_UTR 30.0%
AAGTCAACCAAATTCCAAAT+AGG - chr7_1:8024842-8024861 Msa1008090:five_prime_UTR 30.0%
! AGTCAAACAAATGAGCTTTT+GGG + chr7_1:8024903-8024922 None:intergenic 30.0%
TCAATTATGTTAGGTGATAG+GGG - chr7_1:8024928-8024947 Msa1008090:intron 30.0%
AATGGAAAATGTCATTACCT+TGG + chr7_1:8025177-8025196 None:intergenic 30.0%
TGTTCATTACTGAAAAGACT+TGG - chr7_1:8025240-8025259 Msa1008090:five_prime_UTR 30.0%
ACATCAATGTTGTGAAATTG+CGG - chr7_1:8025366-8025385 Msa1008090:five_prime_UTR 30.0%
ATATTTGTCATAGATCCTGA+AGG - chr7_1:8025519-8025538 Msa1008090:intron 30.0%
TATTTGTCATAGATCCTGAA+GGG - chr7_1:8025520-8025539 Msa1008090:intron 30.0%
TTAGGGAATAGATATAAGGA+AGG + chr7_1:8025748-8025767 None:intergenic 30.0%
! TTGGAATAGATTTTACAAGC+TGG - chr7_1:8025816-8025835 Msa1008090:intron 30.0%
!!! GTATACTTTTTCGCTCTAAA+TGG - chr7_1:8025971-8025990 Msa1008090:five_prime_UTR 30.0%
AAGAAACATTAAGGTGTGTT+TGG - chr7_1:8026101-8026120 Msa1008090:five_prime_UTR 30.0%
!!! AGGAAAGATTGTTTTTTGGT+GGG + chr7_1:8026541-8026560 None:intergenic 30.0%
!!! TAGGAGGAAAGATTGTTTTT+TGG + chr7_1:8026545-8026564 None:intergenic 30.0%
! TTGGAATAGATGAAAGCATA+AGG + chr7_1:8026633-8026652 None:intergenic 30.0%
CTTCATACAATCTTTCCTTA+GGG + chr7_1:8026660-8026679 None:intergenic 30.0%
TCTTCATACAATCTTTCCTT+AGG + chr7_1:8026661-8026680 None:intergenic 30.0%
GATTGTATGAAGATGAAAGA+TGG - chr7_1:8026668-8026687 Msa1008090:intron 30.0%
! TATTTCCAACTCCATCATTT+TGG - chr7_1:8026841-8026860 Msa1008090:intron 30.0%
GCAAAAGGAAAGAAAGTAAA+AGG + chr7_1:8027026-8027045 None:intergenic 30.0%
! ATTTTGCTTTCCCCATAATT+TGG - chr7_1:8027330-8027349 Msa1008090:intron 30.0%
!! AAAGAAGCATCCAAATTATG+GGG + chr7_1:8027343-8027362 None:intergenic 30.0%
ATTTCAATGATCTTATGCAC+TGG - chr7_1:8027665-8027684 Msa1008090:intron 30.0%
AAAGAAGTAACAGAATCTGA+TGG - chr7_1:8027780-8027799 Msa1008090:intron 30.0%
ATGAGATTCATACAGTTGTT+GGG - chr7_1:8027823-8027842 Msa1008090:intron 30.0%
!! CATTTTCAGATAGCTGATTT+TGG - chr7_1:8027874-8027893 Msa1008090:intron 30.0%
!! TTTTCAGATAGCTGATTTTG+GGG - chr7_1:8027876-8027895 Msa1008090:intron 30.0%
! TAAACTAATTTGCATCAAGC+CGG + chr7_1:8027972-8027991 None:intergenic 30.0%
GATACCATTTCAATACTAAG+GGG - chr7_1:8028298-8028317 Msa1008090:intron 30.0%
AAGTTAAAGTTACCTTTGTC+AGG + chr7_1:8028427-8028446 None:intergenic 30.0%
TAGATTTAACAACACCATAG+CGG + chr7_1:8028690-8028709 None:intergenic 30.0%
ATCTAATTGATGCTACTGTT+AGG - chr7_1:8028705-8028724 Msa1008090:five_prime_UTR 30.0%
TCTAATTGATGCTACTGTTA+GGG - chr7_1:8028706-8028725 Msa1008090:five_prime_UTR 30.0%
! TCTGTATAATTTTCACCATG+TGG - chr7_1:8029189-8029208 Msa1008090:five_prime_UTR 30.0%
ATACAGGACACATTAGTATT+TGG + chr7_1:8029305-8029324 None:intergenic 30.0%
TCTATCTGATGCATAAATAC+AGG + chr7_1:8029321-8029340 None:intergenic 30.0%
!!! GATTGTTGAAGTTTTGAAAC+AGG + chr7_1:8029555-8029574 None:intergenic 30.0%
AAAACTTCAACAATCAGAGA+GGG - chr7_1:8029560-8029579 Msa1008090:intron 30.0%
ATAAACATGAAGCTAGCAAT+TGG + chr7_1:8029705-8029724 None:intergenic 30.0%
! AATTGCTAGCTTCATGTTTA+TGG - chr7_1:8029704-8029723 Msa1008090:intron 30.0%
! ATTGCTAGCTTCATGTTTAT+GGG - chr7_1:8029705-8029724 Msa1008090:intron 30.0%
TTCTTCTGTATTGAACATGT+AGG + chr7_1:8029775-8029794 None:intergenic 30.0%
AATTGATATGAGTGAGTACA+TGG - chr7_1:8029806-8029825 Msa1008090:intron 30.0%
ATGCAGTTTCAAGATTGATT+GGG - chr7_1:8029835-8029854 Msa1008090:five_prime_UTR 30.0%
TTTGTTTGATGAGATTGAGA+AGG - chr7_1:8029933-8029952 Msa1008090:five_prime_UTR 30.0%
GGTCATAATGATAACAGTAT+TGG + chr7_1:8030043-8030062 None:intergenic 30.0%
ATCATTATGACCTCAAATGT+TGG - chr7_1:8030051-8030070 Msa1008090:intron 30.0%
TCAACTCTATTCATAAACTC+GGG + chr7_1:8030180-8030199 None:intergenic 30.0%
CAATGCTACTAATTTGATCA+CGG + chr7_1:8030230-8030249 None:intergenic 30.0%
ATCAAATTAGTAGCATTGTC+AGG - chr7_1:8030232-8030251 Msa1008090:intron 30.0%
TTTGAAAAATGGAAAGGAGT+GGG + chr7_1:8030278-8030297 None:intergenic 30.0%
!! TTTTGAAAAATGGAAAGGAG+TGG + chr7_1:8030279-8030298 None:intergenic 30.0%
CTTGATATCAAGGAAAATCA+CGG - chr7_1:8030402-8030421 Msa1008090:intron 30.0%
GTAGAAAAAGATAGGAGTTA+GGG + chr7_1:8030602-8030621 None:intergenic 30.0%
TGTAGAAAAAGATAGGAGTT+AGG + chr7_1:8030603-8030622 None:intergenic 30.0%
ATCTAGTATGCTGAGAAATA+TGG + chr7_1:8030985-8031004 None:intergenic 30.0%
AAGGAAATGGGAGTTGAATA+GGG + chr7_1:8023242-8023261 None:intergenic 35.0%
GTTTCTTCTGTTGAAGGAAA+TGG + chr7_1:8023255-8023274 None:intergenic 35.0%
! CTAATTAGTCTGGAAGCATA+TGG + chr7_1:8023686-8023705 None:intergenic 35.0%
TGTTTGGTATCACAATGAGT+TGG - chr7_1:8023731-8023750 Msa1008090:intron 35.0%
CTACTGATAAGTTCATTCAG+CGG - chr7_1:8024440-8024459 Msa1008090:five_prime_UTR 35.0%
TGTAACAAATGGATCACCTT+GGG + chr7_1:8024469-8024488 None:intergenic 35.0%
ATGTAACAAATGGATCACCT+TGG + chr7_1:8024470-8024489 None:intergenic 35.0%
TAAGTACCCATTAGCGATTA+GGG - chr7_1:8024564-8024583 Msa1008090:five_prime_UTR 35.0%
TGAGCTACTAGTATGACAAA+AGG - chr7_1:8024653-8024672 Msa1008090:five_prime_UTR 35.0%
! AGTTTGTTCGGAAGAACTTA+TGG + chr7_1:8024789-8024808 None:intergenic 35.0%
ACAAATATCTCCAGCCTATT+TGG + chr7_1:8024859-8024878 None:intergenic 35.0%
! GAGTCAAACAAATGAGCTTT+TGG + chr7_1:8024904-8024923 None:intergenic 35.0%
GACTCGCTTTCAATTATGTT+AGG - chr7_1:8024919-8024938 Msa1008090:five_prime_UTR 35.0%
ATTTGTTTCAGTTGAGCACT+TGG - chr7_1:8025033-8025052 Msa1008090:intron 35.0%
! AGATTTTCAGATATCTCAGC+CGG - chr7_1:8025102-8025121 Msa1008090:intron 35.0%
! TCTATTGCAGATTTTAGACC+CGG + chr7_1:8025124-8025143 None:intergenic 35.0%
AATCTGCAATAGAGTCCATT+AGG - chr7_1:8025131-8025150 Msa1008090:intron 35.0%
ATCTGCAATAGAGTCCATTA+GGG - chr7_1:8025132-8025151 Msa1008090:intron 35.0%
TGAAAAGACTTGGATGTCTT+TGG - chr7_1:8025250-8025269 Msa1008090:five_prime_UTR 35.0%
GAAAAGACTTGGATGTCTTT+GGG - chr7_1:8025251-8025270 Msa1008090:five_prime_UTR 35.0%
! TGTCTTTGGGAAAATTAAGC+AGG - chr7_1:8025264-8025283 Msa1008090:five_prime_UTR 35.0%
! GTCTTTGGGAAAATTAAGCA+GGG - chr7_1:8025265-8025284 Msa1008090:five_prime_UTR 35.0%
! TCTTTGGGAAAATTAAGCAG+GGG - chr7_1:8025266-8025285 Msa1008090:five_prime_UTR 35.0%
TCATCATCTCTTCCTATAAC+TGG + chr7_1:8025612-8025631 None:intergenic 35.0%
GAAAGACTGCAATTTCTGAA+GGG - chr7_1:8025706-8025725 Msa1008090:intron 35.0%
! TTAGAGCGAAAAAGTATACC+AGG + chr7_1:8025970-8025989 None:intergenic 35.0%
GGGTTTAAGAGTTTGTCTTA+AGG - chr7_1:8026067-8026086 Msa1008090:five_prime_UTR 35.0%
TTTGGATCACAAAGAAAGTG+AGG - chr7_1:8026119-8026138 Msa1008090:five_prime_UTR 35.0%
TTGGATCACAAAGAAAGTGA+GGG - chr7_1:8026120-8026139 Msa1008090:five_prime_UTR 35.0%
GTAAGAGGAAAGATTGTTGA+AGG - chr7_1:8026150-8026169 Msa1008090:intron 35.0%
! GTTGAAGGAAAGAAAGTATG+AGG - chr7_1:8026165-8026184 Msa1008090:intron 35.0%
GAGATGATTGTTTGAGTGTT+TGG - chr7_1:8026204-8026223 Msa1008090:intron 35.0%
!!! GAGGAAAGATTGTTTTTTGG+TGG + chr7_1:8026542-8026561 None:intergenic 35.0%
! TGTTTGGAACACAGATTAGT+AGG + chr7_1:8026564-8026583 None:intergenic 35.0%
CTAATCTGTGTTCCAAACAA+AGG - chr7_1:8026565-8026584 Msa1008090:intron 35.0%
! ACTAAGGATGGAAGATTTTG+GGG + chr7_1:8026601-8026620 None:intergenic 35.0%
! CACTAAGGATGGAAGATTTT+GGG + chr7_1:8026602-8026621 None:intergenic 35.0%
CATAAGGAAAGATACCACTA+AGG + chr7_1:8026617-8026636 None:intergenic 35.0%
!! GCTGACATTTTAATCCAAAC+TGG + chr7_1:8026710-8026729 None:intergenic 35.0%
GTTTGGATTAAAATGTCAGC+AGG - chr7_1:8026710-8026729 Msa1008090:intron 35.0%
!!! GCAGGAAAGAAAGTACTTTT+TGG - chr7_1:8026728-8026747 Msa1008090:intron 35.0%
TCCCACTTTCTTCACAAAAT+GGG + chr7_1:8026778-8026797 None:intergenic 35.0%
ATCCCACTTTCTTCACAAAA+TGG + chr7_1:8026779-8026798 None:intergenic 35.0%
TAAAAGTGGGACCAAAATGA+TGG + chr7_1:8026855-8026874 None:intergenic 35.0%
TGTTTAGGAATGAAAGTGAG+TGG + chr7_1:8026997-8027016 None:intergenic 35.0%
AATCACTGTTTGGATGCAAA+AGG + chr7_1:8027041-8027060 None:intergenic 35.0%
! ACATTTCAAAGGTACGAAAG+TGG + chr7_1:8027247-8027266 None:intergenic 35.0%
CTCAGGTAAACACATTTCAA+AGG + chr7_1:8027258-8027277 None:intergenic 35.0%
!! CTTTGAAATGTGTTTACCTG+AGG - chr7_1:8027256-8027275 Msa1008090:intron 35.0%
TTGATGAAGCACATACTCTA+CGG + chr7_1:8027481-8027500 None:intergenic 35.0%
TGTGCTTCATCAAAATGCTT+AGG - chr7_1:8027488-8027507 Msa1008090:intron 35.0%
TCAGCTTATATCCCTTGATA+TGG - chr7_1:8027695-8027714 Msa1008090:intron 35.0%
CAGCTTATATCCCTTGATAT+GGG - chr7_1:8027696-8027715 Msa1008090:intron 35.0%
AATAAGTGCACCCATATCAA+GGG + chr7_1:8027709-8027728 None:intergenic 35.0%
TTATTGCTGGAGCAAAATAC+CGG - chr7_1:8027724-8027743 Msa1008090:intron 35.0%
GATGAGATTCATACAGTTGT+TGG - chr7_1:8027822-8027841 Msa1008090:intron 35.0%
TGAGATTCATACAGTTGTTG+GGG - chr7_1:8027824-8027843 Msa1008090:intron 35.0%
TACCAAAAATGTCGTTAGAC+CGG - chr7_1:8027950-8027969 Msa1008090:intron 35.0%
CAACAACACTTGATGAGTAT+CGG - chr7_1:8028203-8028222 Msa1008090:intron 35.0%
GTTGGTCAACATAAACTTGT+TGG + chr7_1:8028267-8028286 None:intergenic 35.0%
GAAATGGTATCTTCAACAGT+AGG + chr7_1:8028289-8028308 None:intergenic 35.0%
CAAGTGCACTATCAGAAATT+CGG + chr7_1:8028357-8028376 None:intergenic 35.0%
! AATTTCTGATAGTGCACTTG+TGG - chr7_1:8028357-8028376 Msa1008090:intron 35.0%
!! AGCTATTGATTTGGTTGATG+AGG - chr7_1:8028871-8028890 Msa1008090:intron 35.0%
!! TATTGATTTGGTTGATGAGG+CGG - chr7_1:8028874-8028893 Msa1008090:intron 35.0%
! AGTGATCTCCATTTTCAGTT+TGG + chr7_1:8028903-8028922 None:intergenic 35.0%
AGATAGGTTAAATCGTCTTG+AGG - chr7_1:8029018-8029037 Msa1008090:intron 35.0%
TCGACTTCAATCAATCAAAG+AGG - chr7_1:8029114-8029133 Msa1008090:five_prime_UTR 35.0%
ACTTCAATCAATCAAAGAGG+AGG - chr7_1:8029117-8029136 Msa1008090:five_prime_UTR 35.0%
!!! ATTGCACTAGTTTTTCCACA+TGG + chr7_1:8029207-8029226 None:intergenic 35.0%
ATGCTAAGAGAAGAAGTAAC+AGG - chr7_1:8029489-8029508 Msa1008090:intron 35.0%
TGCTAAGAGAAGAAGTAACA+GGG - chr7_1:8029490-8029509 Msa1008090:intron 35.0%
TTGCTGAAATTGTAAGCAAG+TGG - chr7_1:8029520-8029539 Msa1008090:intron 35.0%
!!! AAGTTTTGAAACAGGAATGC+CGG + chr7_1:8029547-8029566 None:intergenic 35.0%
CAAAACTTCAACAATCAGAG+AGG - chr7_1:8029559-8029578 Msa1008090:intron 35.0%
GGAGAAGTTGTTGTATTTAG+AGG - chr7_1:8029581-8029600 Msa1008090:intron 35.0%
! TTGCTAGCTTCATGTTTATG+GGG - chr7_1:8029706-8029725 Msa1008090:intron 35.0%
CATGCAGTTTCAAGATTGAT+TGG - chr7_1:8029834-8029853 Msa1008090:five_prime_UTR 35.0%
TGCAGTTTCAAGATTGATTG+GGG - chr7_1:8029836-8029855 Msa1008090:five_prime_UTR 35.0%
AAATAACAGCATAAGGTCTG+CGG + chr7_1:8029916-8029935 None:intergenic 35.0%
ATCGCAGTACATTCTAAACA+CGG - chr7_1:8030074-8030093 Msa1008090:intron 35.0%
GTTTCATAGGCTAATTCCTT+AGG + chr7_1:8030114-8030133 None:intergenic 35.0%
CAACTCTATTCATAAACTCG+GGG + chr7_1:8030179-8030198 None:intergenic 35.0%
CATTGTGATCCTTGATATCA+AGG - chr7_1:8030392-8030411 Msa1008090:intron 35.0%
! CGTGATTTTCCTTGATATCA+AGG + chr7_1:8030404-8030423 None:intergenic 35.0%
AATGTCTCAGCAATCCTAAA+GGG + chr7_1:8030460-8030479 None:intergenic 35.0%
TAATGTCTCAGCAATCCTAA+AGG + chr7_1:8030461-8030480 None:intergenic 35.0%
CTGAGACATTAAAACCATGA+TGG - chr7_1:8030470-8030489 Msa1008090:intron 35.0%
TCATGAAGGCTATTGTGATT+GGG + chr7_1:8030496-8030515 None:intergenic 35.0%
TTCATGAAGGCTATTGTGAT+TGG + chr7_1:8030497-8030516 None:intergenic 35.0%
TTGATGTAATTCACATCGCA+AGG + chr7_1:8030533-8030552 None:intergenic 35.0%
ATCCTGAAAATCTTGCAAGA+AGG + chr7_1:8030557-8030576 None:intergenic 35.0%
GTTAGGGATGTTAAATGACA+TGG + chr7_1:8030586-8030605 None:intergenic 35.0%
TTAGGATATGACCCTAACTA+TGG - chr7_1:8030715-8030734 Msa1008090:intron 35.0%
AAGAGTGATTCAGCAAAATG+TGG - chr7_1:8030753-8030772 Msa1008090:intron 35.0%
GAGAGGAGAATTTAAAGATG+AGG - chr7_1:8030801-8030820 Msa1008090:intron 35.0%
!!! CCTAAAAACTAGTTTTGCTG+TGG + chr7_1:8030877-8030896 None:intergenic 35.0%
!!! CCACAGCAAAACTAGTTTTT+AGG - chr7_1:8030874-8030893 Msa1008090:five_prime_UTR 35.0%
GTTCGTTTAGTCAATTCTGA+AGG + chr7_1:8031137-8031156 None:intergenic 35.0%
CCATCACTGAACTGAATTGA+AGG + chr7_1:8023196-8023215 None:intergenic 40.0%
CCTTCAATTCAGTTCAGTGA+TGG - chr7_1:8023193-8023212 Msa1008090:three_prime_UTR 40.0%
GAAGGAAATGGGAGTTGAAT+AGG + chr7_1:8023243-8023262 None:intergenic 40.0%
! AGCACTGTTTCTTCTGTTGA+AGG + chr7_1:8023261-8023280 None:intergenic 40.0%
TGATTTGAGTGAAACGCGTT+TGG + chr7_1:8023327-8023346 None:intergenic 40.0%
TTCTTCAACTGGAACTGGAA+GGG - chr7_1:8023436-8023455 Msa1008090:CDS 40.0%
! AAGCATTGTAGAGAGAGTAG+AGG - chr7_1:8023825-8023844 Msa1008090:intron 40.0%
TTAGCCCACCTAAATTGACA+CGG - chr7_1:8023935-8023954 Msa1008090:intron 40.0%
! GATTTTCCCCGTGTCAATTT+AGG + chr7_1:8023946-8023965 None:intergenic 40.0%
TCGAACTTGAAACCTTGAAG+AGG - chr7_1:8023964-8023983 Msa1008090:intron 40.0%
AGCTGAGAAAACTATCCATG+TGG + chr7_1:8024119-8024138 None:intergenic 40.0%
TCTCAGCTTACTTGCAGAAT+TGG - chr7_1:8024131-8024150 Msa1008090:CDS 40.0%
!! GTTATGTCTCTTAGCTTGTG+AGG - chr7_1:8024179-8024198 Msa1008090:CDS 40.0%
AGAGAACAAGCATCAGATTG+TGG - chr7_1:8024318-8024337 Msa1008090:CDS 40.0%
CTAAGTACCCATTAGCGATT+AGG - chr7_1:8024563-8024582 Msa1008090:five_prime_UTR 40.0%
! TTAATGAAGCGCTCATGCAT+AGG - chr7_1:8024605-8024624 Msa1008090:five_prime_UTR 40.0%
CAACCAAATTCCAAATAGGC+TGG - chr7_1:8024846-8024865 Msa1008090:five_prime_UTR 40.0%
! TCTCCAGCCTATTTGGAATT+TGG + chr7_1:8024852-8024871 None:intergenic 40.0%
TAGGCTGGAGATATTTGTTC+TGG - chr7_1:8024861-8024880 Msa1008090:five_prime_UTR 40.0%
! GAATCAGCTGGTTCAATGTT+GGG - chr7_1:8024950-8024969 Msa1008090:intron 40.0%
! AATCAGCTGGTTCAATGTTG+GGG - chr7_1:8024951-8024970 Msa1008090:intron 40.0%
AGGGACTTCCAGAAAGAATA+CGG - chr7_1:8025004-8025023 Msa1008090:intron 40.0%
ATGAATCCCCGTATTCTTTC+TGG + chr7_1:8025015-8025034 None:intergenic 40.0%
!!! CTTGGTTCTTGGTTTTATCC+AGG - chr7_1:8025051-8025070 Msa1008090:intron 40.0%
TTTATCCAGGACCAACGATT+CGG - chr7_1:8025064-8025083 Msa1008090:intron 40.0%
! GATTTTCAGATATCTCAGCC+GGG - chr7_1:8025103-8025122 Msa1008090:intron 40.0%
TCTGCAATAGAGTCCATTAG+GGG - chr7_1:8025133-8025152 Msa1008090:intron 40.0%
TACCTTGGTCAATTACTGAC+TGG + chr7_1:8025162-8025181 None:intergenic 40.0%
ATGTTGTGAAATTGCGGCTA+TGG - chr7_1:8025372-8025391 Msa1008090:five_prime_UTR 40.0%
! GCTAGAGCACTTATATGTAG+TGG - chr7_1:8025445-8025464 Msa1008090:intron 40.0%
TAAAGCAGTGTTGTCAATCG+CGG + chr7_1:8025500-8025519 None:intergenic 40.0%
AATGCTTCATACTTCCCTTC+AGG + chr7_1:8025537-8025556 None:intergenic 40.0%
! TGAAGGGAAGTATGAAGCAT+TGG - chr7_1:8025536-8025555 Msa1008090:intron 40.0%
TGGGAAAGATTTGACAGCAA+TGG - chr7_1:8025566-8025585 Msa1008090:intron 40.0%
GGAAAGCTTGATCCAGTTAT+AGG - chr7_1:8025597-8025616 Msa1008090:intron 40.0%
GAAGAGATGATGAAATACGC+AGG - chr7_1:8025619-8025638 Msa1008090:intron 40.0%
GGAAAGACTGCAATTTCTGA+AGG - chr7_1:8025705-8025724 Msa1008090:intron 40.0%
AGTGAGGGAAAGATTGTAAG+AGG - chr7_1:8026135-8026154 Msa1008090:intron 40.0%
! GAAAGTATGAGGAAAGTGAG+TGG - chr7_1:8026176-8026195 Msa1008090:intron 40.0%
GGTATGAGTGAAAGTGAAAG+AGG - chr7_1:8026225-8026244 Msa1008090:intron 40.0%
AACATATGAAGAGATGCACG+TGG - chr7_1:8026423-8026442 Msa1008090:intron 40.0%
ATGTTCTCACTACTTTCTCC+TGG - chr7_1:8026486-8026505 Msa1008090:five_prime_UTR 40.0%
TTGGAACACAGATTAGTAGG+AGG + chr7_1:8026561-8026580 None:intergenic 40.0%
GGAATTGAGCTTCCTTTGTT+TGG + chr7_1:8026580-8026599 None:intergenic 40.0%
! CCACTAAGGATGGAAGATTT+TGG + chr7_1:8026603-8026622 None:intergenic 40.0%
CCAAAATCTTCCATCCTTAG+TGG - chr7_1:8026600-8026619 Msa1008090:intron 40.0%
AGGAAAGATACCACTAAGGA+TGG + chr7_1:8026613-8026632 None:intergenic 40.0%
ATCTATTCCAACAGACCCTA+AGG - chr7_1:8026642-8026661 Msa1008090:intron 40.0%
AATCTTTCCTTAGGGTCTGT+TGG + chr7_1:8026652-8026671 None:intergenic 40.0%
GATAGTGCTTCTTTCCAGTT+TGG - chr7_1:8026693-8026712 Msa1008090:intron 40.0%
CACTTTCTTCACAAAATGGG+GGG + chr7_1:8026775-8026794 None:intergenic 40.0%
CCACTTTCTTCACAAAATGG+GGG + chr7_1:8026776-8026795 None:intergenic 40.0%
CCCACTTTCTTCACAAAATG+GGG + chr7_1:8026777-8026796 None:intergenic 40.0%
! CCCCATTTTGTGAAGAAAGT+GGG - chr7_1:8026774-8026793 Msa1008090:intron 40.0%
TTGTGAAGAAAGTGGGATGA+AGG - chr7_1:8026781-8026800 Msa1008090:intron 40.0%
TGTGAAGAAAGTGGGATGAA+GGG - chr7_1:8026782-8026801 Msa1008090:intron 40.0%
! CCTCAGATTACAAGGTATCA+CGG + chr7_1:8027169-8027188 None:intergenic 40.0%
TATATGCCCTGTACTTAGTG+TGG - chr7_1:8027215-8027234 Msa1008090:intron 40.0%
CAATGTCCACACTAAGTACA+GGG + chr7_1:8027224-8027243 None:intergenic 40.0%
AATGTGTTTACCTGAGGCTA+AGG - chr7_1:8027262-8027281 Msa1008090:intron 40.0%
CCTGTTTCAAAGGAAGAGAT+AGG + chr7_1:8027411-8027430 None:intergenic 40.0%
!! CCTATCTCTTCCTTTGAAAC+AGG - chr7_1:8027408-8027427 Msa1008090:intron 40.0%
CATTAAAACTAGACTGGCAG+AGG + chr7_1:8027589-8027608 None:intergenic 40.0%
CAATAAGTGCACCCATATCA+AGG + chr7_1:8027710-8027729 None:intergenic 40.0%
TATTGCTGGAGCAAAATACC+GGG - chr7_1:8027725-8027744 Msa1008090:intron 40.0%
ATTAAAAATCCGCTGAAGGC+TGG - chr7_1:8027899-8027918 Msa1008090:intron 40.0%
TAGGCATAAGCGTCATACAA+AGG + chr7_1:8028041-8028060 None:intergenic 40.0%
AACCTCTTAAAGCCTATGCT+CGG - chr7_1:8028155-8028174 Msa1008090:intron 40.0%
! GTATCGGAAGTATATCGAGA+AGG - chr7_1:8028219-8028238 Msa1008090:intron 40.0%
TGGTATCTTCAACAGTAGGT+TGG + chr7_1:8028285-8028304 None:intergenic 40.0%
! CAGTCCCCTTAGTATTGAAA+TGG + chr7_1:8028305-8028324 None:intergenic 40.0%
TTTCAATACTAAGGGGACTG+CGG - chr7_1:8028305-8028324 Msa1008090:intron 40.0%
! GAAAGGTATGAGCTACATCA+TGG - chr7_1:8028328-8028347 Msa1008090:intron 40.0%
! GGAAGATTTTTGCCTGACAA+AGG - chr7_1:8028412-8028431 Msa1008090:intron 40.0%
TAGCGGAGATTGAAAACACT+GGG + chr7_1:8028673-8028692 None:intergenic 40.0%
! ATAGCGGAGATTGAAAACAC+TGG + chr7_1:8028674-8028693 None:intergenic 40.0%
! AGTGTTTTCAATCTCCGCTA+TGG - chr7_1:8028673-8028692 Msa1008090:five_prime_UTR 40.0%
TTGATCTCATCAAGTGCAGT+AGG + chr7_1:8028932-8028951 None:intergenic 40.0%
TCTCACGAATGATACAGACA+AGG - chr7_1:8028988-8029007 Msa1008090:intron 40.0%
! CAGACAAGGCTTCTAAAGAT+AGG - chr7_1:8029002-8029021 Msa1008090:intron 40.0%
CATACTTTAATTCAGCAGCG+CGG + chr7_1:8029392-8029411 None:intergenic 40.0%
GTTGTCGTTGCAATGAGTTA+AGG + chr7_1:8029419-8029438 None:intergenic 40.0%
GAAATTGTAAGCAAGTGGAC+CGG - chr7_1:8029525-8029544 Msa1008090:intron 40.0%
GTACTTCATAAGCGTGTTGT+AGG - chr7_1:8029606-8029625 Msa1008090:intron 40.0%
! TCAGTTTTTCCTACACCTGT+AGG + chr7_1:8029732-8029751 None:intergenic 40.0%
AGGTGTAGGAAAAACTGAGT+TGG - chr7_1:8029734-8029753 Msa1008090:intron 40.0%
TCTAAACACGGATGATGACA+CGG - chr7_1:8030086-8030105 Msa1008090:intron 40.0%
CCTATGAAACCATAAAGCAG+CGG - chr7_1:8030124-8030143 Msa1008090:intron 40.0%
CTATGAAACCATAAAGCAGC+GGG - chr7_1:8030125-8030144 Msa1008090:intron 40.0%
TAGTAGCATTGTCAGGTTAC+AGG - chr7_1:8030239-8030258 Msa1008090:intron 40.0%
TCCTAAAGGGACTGCAATTA+CGG + chr7_1:8030447-8030466 None:intergenic 40.0%
! AGCCTTCTTGCAAGATTTTC+AGG - chr7_1:8030552-8030571 Msa1008090:intron 40.0%
AGATCGCAAGATGAAAATCC+AGG - chr7_1:8030660-8030679 Msa1008090:intron 40.0%
TAAGCTTCCAAGAAGTTGGA+TGG + chr7_1:8030698-8030717 None:intergenic 40.0%
ATCCAACTTCTTGGAAGCTT+AGG - chr7_1:8030697-8030716 Msa1008090:intron 40.0%
ATCCTAAGCTTCCAAGAAGT+TGG + chr7_1:8030702-8030721 None:intergenic 40.0%
! TGCTGAATCACTCTTTTGAC+TGG + chr7_1:8030748-8030767 None:intergenic 40.0%
! TTGCTGTGGAAGTTGATTGT+TGG + chr7_1:8030863-8030882 None:intergenic 40.0%
AAGCTTGTGAAGAATGTTCC+AGG + chr7_1:8030938-8030957 None:intergenic 40.0%
!! GCAGTAGAAAGCATTCATTC+AGG + chr7_1:8030961-8030980 None:intergenic 40.0%
!! ACAATGCTTTGGAGTGACAA+AGG + chr7_1:8031074-8031093 None:intergenic 40.0%
CGGAGAAAGAGAGAGAAACA+CGG + chr7_1:8023304-8023323 None:intergenic 45.0%
TTTGAGTGAAACGCGTTTGG+CGG + chr7_1:8023324-8023343 None:intergenic 45.0%
CGTTGTGAAGCTTCTTCAAC+TGG - chr7_1:8023425-8023444 Msa1008090:CDS 45.0%
GAAGCTTCTTCAACTGGAAC+TGG - chr7_1:8023431-8023450 Msa1008090:CDS 45.0%
CTTCTTCAACTGGAACTGGA+AGG - chr7_1:8023435-8023454 Msa1008090:CDS 45.0%
TCTTACGAGCTCGTTGAGTT+TGG + chr7_1:8023798-8023817 None:intergenic 45.0%
TAGCCCACCTAAATTGACAC+GGG - chr7_1:8023936-8023955 Msa1008090:intron 45.0%
TTCCCCGTGTCAATTTAGGT+GGG + chr7_1:8023942-8023961 None:intergenic 45.0%
TTTCCCCGTGTCAATTTAGG+TGG + chr7_1:8023943-8023962 None:intergenic 45.0%
!! TCTTAGCTTGTGAGGTACAG+CGG - chr7_1:8024187-8024206 Msa1008090:CDS 45.0%
ACAGCAAGAGTTCACAGAGA+TGG - chr7_1:8024258-8024277 Msa1008090:CDS 45.0%
GATCTTTACCAAGGTTGGAG+TGG - chr7_1:8024396-8024415 Msa1008090:exon 45.0%
AGTATTGTCCACTCCAACCT+TGG + chr7_1:8024407-8024426 None:intergenic 45.0%
AACAGGCCCTAATCGCTAAT+GGG + chr7_1:8024573-8024592 None:intergenic 45.0%
AAACAGGCCCTAATCGCTAA+TGG + chr7_1:8024574-8024593 None:intergenic 45.0%
ATTAGCGATTAGGGCCTGTT+TGG - chr7_1:8024573-8024592 Msa1008090:five_prime_UTR 45.0%
AAGCTATCGCAGAGAGCTTA+TGG - chr7_1:8024723-8024742 Msa1008090:five_prime_UTR 45.0%
! GGAATCAGCTGGTTCAATGT+TGG - chr7_1:8024949-8024968 Msa1008090:intron 45.0%
! GTATTCTTTCTGGAAGTCCC+TGG + chr7_1:8025005-8025024 None:intergenic 45.0%
GGGACTTCCAGAAAGAATAC+GGG - chr7_1:8025005-8025024 Msa1008090:intron 45.0%
GGACTTCCAGAAAGAATACG+GGG - chr7_1:8025006-8025025 Msa1008090:intron 45.0%
! TCAGTTGAGCACTTGGTTCT+TGG - chr7_1:8025040-8025059 Msa1008090:intron 45.0%
TTATCCAGGACCAACGATTC+GGG - chr7_1:8025065-8025084 Msa1008090:intron 45.0%
TTGTGAAATTGCGGCTATGG+CGG - chr7_1:8025375-8025394 Msa1008090:five_prime_UTR 45.0%
TTGACAGCAATGGCTAAAGC+AGG - chr7_1:8025576-8025595 Msa1008090:intron 45.0%
GGTGCATTCAAATTCTCTCC+AGG - chr7_1:8025640-8025659 Msa1008090:intron 45.0%
GGGATTGTTCTTTGTTCTCC+TGG + chr7_1:8025661-8025680 None:intergenic 45.0%
! AAGAACAATCCCGTGCTGAT+TGG - chr7_1:8025669-8025688 Msa1008090:intron 45.0%
ATTGCAGTCTTTCCAACACC+AGG + chr7_1:8025699-8025718 None:intergenic 45.0%
ATGCACGTGGATCAAAGCAA+GGG - chr7_1:8026436-8026455 Msa1008090:five_prime_UTR 45.0%
! CCCCCATTTTGTGAAGAAAG+TGG - chr7_1:8026773-8026792 Msa1008090:intron 45.0%
! TGGGACCAAAATGATGGAGT+TGG + chr7_1:8026849-8026868 None:intergenic 45.0%
CCGTGATACCTTGTAATCTG+AGG - chr7_1:8027166-8027185 Msa1008090:intron 45.0%
GCAATGTCCACACTAAGTAC+AGG + chr7_1:8027225-8027244 None:intergenic 45.0%
ATGAGACAATCCTTAGCCTC+AGG + chr7_1:8027275-8027294 None:intergenic 45.0%
TCTGAGCAAGCCTGTTTCAA+AGG + chr7_1:8027421-8027440 None:intergenic 45.0%
CTACGGTTCATCAAAGCTTG+AGG + chr7_1:8027464-8027483 None:intergenic 45.0%
GACTGGCAGAGGATATAGTA+AGG + chr7_1:8027578-8027597 None:intergenic 45.0%
GATATGGGTGCACTTATTGC+TGG - chr7_1:8027711-8027730 Msa1008090:intron 45.0%
ATTGCTGGAGCAAAATACCG+GGG - chr7_1:8027726-8027745 Msa1008090:intron 45.0%
ATTCATACAGTTGTTGGGGC+AGG - chr7_1:8027828-8027847 Msa1008090:intron 45.0%
GGGGATTAAAAATCCGCTGA+AGG - chr7_1:8027895-8027914 Msa1008090:intron 45.0%
AGTAATAGACCAGCCTTCAG+CGG + chr7_1:8027911-8027930 None:intergenic 45.0%
! AGCCGGTCTAACGACATTTT+TGG + chr7_1:8027955-8027974 None:intergenic 45.0%
! CGCATGTTAGGTGCTACAAA+TGG - chr7_1:8028116-8028135 Msa1008090:intron 45.0%
! AGGTGCTACAAATGGTGCTA+TGG - chr7_1:8028124-8028143 Msa1008090:intron 45.0%
!! ACAAATGGTGCTATGGATGC+TGG - chr7_1:8028131-8028150 Msa1008090:intron 45.0%
TTCAATACTAAGGGGACTGC+GGG - chr7_1:8028306-8028325 Msa1008090:intron 45.0%
TGTGGAAGCTGCAATTCTCT+CGG - chr7_1:8028375-8028394 Msa1008090:intron 45.0%
CTCTCGGATCGTTATATCAG+TGG - chr7_1:8028391-8028410 Msa1008090:intron 45.0%
CTGCACTTGATGAGATCAAC+CGG - chr7_1:8028933-8028952 Msa1008090:intron 45.0%
ACTTGATGAGATCAACCGGT+CGG - chr7_1:8028937-8028956 Msa1008090:intron 45.0%
! GTCTCTCCATCTCTAGTTTC+AGG + chr7_1:8028964-8028983 None:intergenic 45.0%
AGTGAACGTTGAGATCCAAC+AGG - chr7_1:8029344-8029363 Msa1008090:intron 45.0%
CGCGCTGCTGAATTAAAGTA+TGG - chr7_1:8029390-8029409 Msa1008090:intron 45.0%
TCTTGAACGTTGGATAGCCT+CGG + chr7_1:8029658-8029677 None:intergenic 45.0%
AAAGACCTGCTCTTGAACGT+TGG + chr7_1:8029668-8029687 None:intergenic 45.0%
AAGCTAGCAATTGGACGATG+AGG + chr7_1:8029696-8029715 None:intergenic 45.0%
TTCATGTTTATGGGGCCTAC+AGG - chr7_1:8029714-8029733 Msa1008090:intron 45.0%
TCTTCGTACCCAACATATCC+AGG + chr7_1:8029867-8029886 None:intergenic 45.0%
TGGATATGTTGGGTACGAAG+AGG - chr7_1:8029866-8029885 Msa1008090:five_prime_UTR 45.0%
GGATATGTTGGGTACGAAGA+GGG - chr7_1:8029867-8029886 Msa1008090:five_prime_UTR 45.0%
! TGGAAGAGTAACTGACTCAC+AGG - chr7_1:8029999-8030018 Msa1008090:five_prime_UTR 45.0%
! GGAAGAGTAACTGACTCACA+GGG - chr7_1:8030000-8030019 Msa1008090:five_prime_UTR 45.0%
GTACTGCGATCCAACATTTG+AGG + chr7_1:8030064-8030083 None:intergenic 45.0%
! CCGCTGCTTTATGGTTTCAT+AGG + chr7_1:8030127-8030146 None:intergenic 45.0%
AACCATAAAGCAGCGGGTAA+TGG - chr7_1:8030131-8030150 Msa1008090:intron 45.0%
! ATCCATTACCCGCTGCTTTA+TGG + chr7_1:8030136-8030155 None:intergenic 45.0%
CTAATTTGATCACGGTCGAG+AGG + chr7_1:8030222-8030241 None:intergenic 45.0%
GAAAAATGGAAAGGAGTGGG+AGG + chr7_1:8030275-8030294 None:intergenic 45.0%
CTATTGTGATTGGGCCATCA+TGG + chr7_1:8030487-8030506 None:intergenic 45.0%
ATGACCCTAACTATGGAGCT+AGG - chr7_1:8030722-8030741 Msa1008090:intron 45.0%
TGTGGAGAATGAACTTGCCA+AGG - chr7_1:8030771-8030790 Msa1008090:intron 45.0%
GTGGAGAATGAACTTGCCAA+GGG - chr7_1:8030772-8030791 Msa1008090:intron 45.0%
TTCTCCTCTCAGAATACCCT+TGG + chr7_1:8030791-8030810 None:intergenic 45.0%
GAATGTTCCAGGCTTTCTTG+CGG + chr7_1:8030927-8030946 None:intergenic 45.0%
!! AAAAAAATTATAATAAAAGT+GGG + chr7_1:8026868-8026887 None:intergenic 5.0%
!! AAAAAAAATTATAATAAAAG+TGG + chr7_1:8026869-8026888 None:intergenic 5.0%
!!! ACTTTTATTATAATTTTTTT+TGG - chr7_1:8026868-8026887 Msa1008090:intron 5.0%
GCCGGTGTCTTTGTCCAAAT+CGG - chr7_1:8023596-8023615 Msa1008090:CDS 50.0%
!! CCCGATTTGGACAAAGACAC+CGG + chr7_1:8023600-8023619 None:intergenic 50.0%
CCGGTGTCTTTGTCCAAATC+GGG - chr7_1:8023597-8023616 Msa1008090:CDS 50.0%
CGGTGTCTTTGTCCAAATCG+GGG - chr7_1:8023598-8023617 Msa1008090:CDS 50.0%
GAGACTATGAAGCCCCGATT+TGG + chr7_1:8023613-8023632 None:intergenic 50.0%
AGCCCACCTAAATTGACACG+GGG - chr7_1:8023937-8023956 Msa1008090:intron 50.0%
! TGGGAGTGTGATCCTCTTCA+AGG + chr7_1:8023979-8023998 None:intergenic 50.0%
AGTGGTACCAAGTCCCACTT+GGG + chr7_1:8024029-8024048 None:intergenic 50.0%
AAGTGGTACCAAGTCCCACT+TGG + chr7_1:8024030-8024049 None:intergenic 50.0%
! TGAGGTACAGCGGTTGATGT+TGG - chr7_1:8024197-8024216 Msa1008090:CDS 50.0%
! GAGGTACAGCGGTTGATGTT+GGG - chr7_1:8024198-8024217 Msa1008090:CDS 50.0%
! AGCGGTTGATGTTGGGACTT+GGG - chr7_1:8024205-8024224 Msa1008090:CDS 50.0%
AAGAGTTCACAGAGATGGCC+TGG - chr7_1:8024263-8024282 Msa1008090:CDS 50.0%
AGATGAAACTATCGCCTGCC+AGG + chr7_1:8024284-8024303 None:intergenic 50.0%
GCAGGCGATAGTTTCATCTC+CGG - chr7_1:8024285-8024304 Msa1008090:CDS 50.0%
GATAGTTTCATCTCCGGAGG+TGG - chr7_1:8024291-8024310 Msa1008090:CDS 50.0%
TTGTTCTCTTTCGCCACCTC+CGG + chr7_1:8024307-8024326 None:intergenic 50.0%
! GGAGACAGAGCACTTGATGA+AGG - chr7_1:8024339-8024358 Msa1008090:CDS 50.0%
GCACTTGATGAAGGCTCTGT+TGG - chr7_1:8024348-8024367 Msa1008090:CDS 50.0%
GCTCTGTTGGAGCAGAAGAA+TGG - chr7_1:8024361-8024380 Msa1008090:CDS 50.0%
! AGAAGAATGGTCTTGCTCGC+AGG - chr7_1:8024374-8024393 Msa1008090:CDS 50.0%
TGCTCGCAGGATCTTTACCA+AGG - chr7_1:8024387-8024406 Msa1008090:CDS 50.0%
CGCAGGATCTTTACCAAGGT+TGG - chr7_1:8024391-8024410 Msa1008090:exon 50.0%
TAGGTGATAGGGGAATCAGC+TGG - chr7_1:8024938-8024957 Msa1008090:intron 50.0%
TTCAATGTTGGGGCGCGATT+TGG - chr7_1:8024961-8024980 Msa1008090:intron 50.0%
! AGGGATTGATTCAGAGAGCC+AGG - chr7_1:8024984-8025003 Msa1008090:intron 50.0%
! GGGATTGATTCAGAGAGCCA+GGG - chr7_1:8024985-8025004 Msa1008090:intron 50.0%
AGAGTTGCTTCCCGAATCGT+TGG + chr7_1:8025078-8025097 None:intergenic 50.0%
CGCCAGTCAGTAATTGACCA+AGG - chr7_1:8025157-8025176 Msa1008090:five_prime_UTR 50.0%
GATGCACGTGGATCAAAGCA+AGG - chr7_1:8026435-8026454 Msa1008090:five_prime_UTR 50.0%
GATCAAAGCAAGGGCAGGAT+TGG - chr7_1:8026445-8026464 Msa1008090:five_prime_UTR 50.0%
ACTTTCTCCTGGTTTCAGCG+CGG - chr7_1:8026497-8026516 Msa1008090:five_prime_UTR 50.0%
TTTGTTTCCGCGCTGAAACC+AGG + chr7_1:8026507-8026526 None:intergenic 50.0%
GCGCGGAAACAAATCTGTGT+AGG - chr7_1:8026514-8026533 Msa1008090:five_prime_UTR 50.0%
!!! GGGGGATTGTTTTTGCACGT+GGG + chr7_1:8026757-8026776 None:intergenic 50.0%
CTTGCTCAGAGAATCGTGCA+AGG - chr7_1:8027431-8027450 Msa1008090:intron 50.0%
ACCGGGGAGAATTCGAAGAT+AGG - chr7_1:8027742-8027761 Msa1008090:intron 50.0%
GCCTATCTTCGAATTCTCCC+CGG + chr7_1:8027746-8027765 None:intergenic 50.0%
!! CTCCGAGCATAGGCTTTAAG+AGG + chr7_1:8028160-8028179 None:intergenic 50.0%
CTTAAAGCCTATGCTCGGAG+AGG - chr7_1:8028160-8028179 Msa1008090:intron 50.0%
! TCTCTAGTTTCAGGACCGAC+CGG + chr7_1:8028955-8028974 None:intergenic 50.0%
GTCGGTCCTGAAACTAGAGA+TGG - chr7_1:8028955-8028974 Msa1008090:intron 50.0%
GCAACGACAACTTGAGAGTG+CGG - chr7_1:8029428-8029447 Msa1008090:intron 50.0%
AGCCTCGGCTACTGCTTTAA+CGG + chr7_1:8029643-8029662 None:intergenic 50.0%
GCTATCCAACGTTCAAGAGC+AGG - chr7_1:8029660-8029679 Msa1008090:intron 50.0%
TTTATGGGGCCTACAGGTGT+AGG - chr7_1:8029720-8029739 Msa1008090:intron 50.0%
TCGTACCCAACATATCCAGG+TGG + chr7_1:8029864-8029883 None:intergenic 50.0%
TATGTTGGGTACGAAGAGGG+AGG - chr7_1:8029870-8029889 Msa1008090:five_prime_UTR 50.0%
CATAAACTCGGGGCGAAAGA+TGG + chr7_1:8030169-8030188 None:intergenic 50.0%
GCCGTAATTGCAGTCCCTTT+AGG - chr7_1:8030443-8030462 Msa1008090:intron 50.0%
GATGCTGCCATCCAACTTCT+TGG - chr7_1:8030688-8030707 Msa1008090:intron 50.0%
CTGGCCTAGCTCCATAGTTA+GGG + chr7_1:8030729-8030748 None:intergenic 50.0%
! ACTGGCCTAGCTCCATAGTT+AGG + chr7_1:8030730-8030749 None:intergenic 50.0%
!! CTTGCCAAGGGTATTCTGAG+AGG - chr7_1:8030784-8030803 Msa1008090:intron 50.0%
ATCTACACCGCAAGAAAGCC+TGG - chr7_1:8030917-8030936 Msa1008090:five_prime_UTR 50.0%
AGACATGTCCGACACCAGAG+AGG + chr7_1:8023499-8023518 None:intergenic 55.0%
TACCATCAGGCCAACCCAAG+TGG - chr7_1:8024012-8024031 Msa1008090:intron 55.0%
ACCATCAGGCCAACCCAAGT+GGG - chr7_1:8024013-8024032 Msa1008090:intron 55.0%
GTACCAAGTCCCACTTGGGT+TGG + chr7_1:8024025-8024044 None:intergenic 55.0%
! CAGCGGTTGATGTTGGGACT+TGG - chr7_1:8024204-8024223 Msa1008090:CDS 55.0%
! GCGGTTGATGTTGGGACTTG+GGG - chr7_1:8024206-8024225 Msa1008090:CDS 55.0%
GGCGATAGTTTCATCTCCGG+AGG - chr7_1:8024288-8024307 Msa1008090:CDS 55.0%
GTTCATTCAGCGGCAACCCA+AGG - chr7_1:8024450-8024469 Msa1008090:five_prime_UTR 55.0%
! AATGTTGGGGCGCGATTTGG+AGG - chr7_1:8024964-8024983 Msa1008090:intron 55.0%
! ATGTTGGGGCGCGATTTGGA+GGG - chr7_1:8024965-8024984 Msa1008090:intron 55.0%
! TACTGACTGGCGTCCCCTAA+TGG + chr7_1:8025149-8025168 None:intergenic 55.0%
GCAGTGTTGTCAATCGCGGA+CGG + chr7_1:8025496-8025515 None:intergenic 55.0%
ACCAGGCTCACCAATCAGCA+CGG + chr7_1:8025682-8025701 None:intergenic 55.0%
CTGATTGGTGAGCCTGGTGT+TGG - chr7_1:8025684-8025703 Msa1008090:intron 55.0%
CAGCACAAGTGCTCGACAGA+TGG + chr7_1:8025785-8025804 None:intergenic 55.0%
ACGTGGATCAAAGCAAGGGC+AGG - chr7_1:8026440-8026459 Msa1008090:five_prime_UTR 55.0%
!!! GGGGGGATTGTTTTTGCACG+TGG + chr7_1:8026758-8026777 None:intergenic 55.0%
AGAGGAGAGCTGCGATGCAT+TGG - chr7_1:8028178-8028197 Msa1008090:intron 55.0%
TGGAAACGACGCTCTAGTGC+TGG + chr7_1:8028247-8028266 None:intergenic 55.0%
TACTAAGGGGACTGCGGGAA+AGG - chr7_1:8028311-8028330 Msa1008090:intron 55.0%
GGCGGCTGCCAAACTGAAAA+TGG - chr7_1:8028892-8028911 Msa1008090:intron 55.0%
AGGCTGAGCTGACTGAACAG+TGG - chr7_1:8029068-8029087 Msa1008090:intron 55.0%
GGCTGAGCTGACTGAACAGT+GGG - chr7_1:8029069-8029088 Msa1008090:intron 55.0%
CATACTCTCGCTCAGCCTGT+TGG + chr7_1:8029362-8029381 None:intergenic 55.0%
TCGGCTACTGCTTTAACGGC+AGG + chr7_1:8029639-8029658 None:intergenic 55.0%
TGCCGTTAAAGCAGTAGCCG+AGG - chr7_1:8029638-8029657 Msa1008090:intron 55.0%
! AGATTGATTGGGGCACCACC+TGG - chr7_1:8029846-8029865 Msa1008090:five_prime_UTR 55.0%
GGGCACCACCTGGATATGTT+GGG - chr7_1:8029856-8029875 Msa1008090:five_prime_UTR 55.0%
GGATGATGACACGGCACCTA+AGG - chr7_1:8030095-8030114 Msa1008090:intron 55.0%
TTTGATCACGGTCGAGAGGC+TGG + chr7_1:8030218-8030237 None:intergenic 55.0%
GAAGCACGGACACTCCTCTC+TGG - chr7_1:8023482-8023501 Msa1008090:CDS 60.0%
CGGACACTCCTCTCTGGTGT+CGG - chr7_1:8023488-8023507 Msa1008090:CDS 60.0%
! TTGTGTCGGCGTGTCAGTGC+CGG - chr7_1:8023578-8023597 Msa1008090:CDS 60.0%
!! TCCCACTTGGGTTGGCCTGA+TGG + chr7_1:8024017-8024036 None:intergenic 60.0%
AGGCCAACCCAAGTGGGACT+TGG - chr7_1:8024019-8024038 Msa1008090:CDS 60.0%
GTTCACAGAGATGGCCTGGC+AGG - chr7_1:8024267-8024286 Msa1008090:CDS 60.0%
GCTTCCCGAATCGTTGGTCC+TGG + chr7_1:8025072-8025091 None:intergenic 60.0%
CCAGGCTCACCAATCAGCAC+GGG + chr7_1:8025681-8025700 None:intergenic 60.0%
CAGCTCTCCTCTCCGAGCAT+AGG + chr7_1:8028170-8028189 None:intergenic 60.0%
! GGGGCACCACCTGGATATGT+TGG - chr7_1:8029855-8029874 Msa1008090:five_prime_UTR 60.0%
AGGTCTGCGGCGAACTGTCT+CGG + chr7_1:8029903-8029922 None:intergenic 60.0%
GGATGGCAGCATCTGTCACC+TGG + chr7_1:8030681-8030700 None:intergenic 60.0%
!! CCCGTGCTGATTGGTGAGCC+TGG - chr7_1:8025678-8025697 Msa1008090:intron 65.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 8023084 8031194 8023084 ID=Msa1008090;Name=Msa1008090
chr7_1 mRNA 8023084 8031194 8023084 ID=Msa1008090-mRNA-1;Parent=Msa1008090;Name=Msa1008090-mRNA-1;_AED=0.09;_eAED=0.09;_QI=2342|1|1|1|0.88|0.8|10|306|214
chr7_1 exon 8023084 8023644 8023084 ID=Msa1008090-mRNA-1:exon:2445;Parent=Msa1008090-mRNA-1
chr7_1 exon 8024018 8024942 8024018 ID=Msa1008090-mRNA-1:exon:2444;Parent=Msa1008090-mRNA-1
chr7_1 exon 8025140 8025405 8025140 ID=Msa1008090-mRNA-1:exon:2443;Parent=Msa1008090-mRNA-1
chr7_1 exon 8025845 8026152 8025845 ID=Msa1008090-mRNA-1:exon:2442;Parent=Msa1008090-mRNA-1
chr7_1 exon 8026429 8026579 8026429 ID=Msa1008090-mRNA-1:exon:2441;Parent=Msa1008090-mRNA-1
chr7_1 exon 8026794 8026848 8026794 ID=Msa1008090-mRNA-1:exon:2440;Parent=Msa1008090-mRNA-1
chr7_1 exon 8028551 8028746 8028551 ID=Msa1008090-mRNA-1:exon:2439;Parent=Msa1008090-mRNA-1
chr7_1 exon 8029100 8029337 8029100 ID=Msa1008090-mRNA-1:exon:2438;Parent=Msa1008090-mRNA-1
chr7_1 exon 8029807 8030025 8029807 ID=Msa1008090-mRNA-1:exon:2437;Parent=Msa1008090-mRNA-1
chr7_1 exon 8030821 8031194 8030821 ID=Msa1008090-mRNA-1:exon:2436;Parent=Msa1008090-mRNA-1
chr7_1 five_prime_UTR 8030821 8031194 8030821 ID=Msa1008090-mRNA-1:five_prime_utr;Parent=Msa1008090-mRNA-1
chr7_1 five_prime_UTR 8029807 8030025 8029807 ID=Msa1008090-mRNA-1:five_prime_utr;Parent=Msa1008090-mRNA-1
chr7_1 five_prime_UTR 8029100 8029337 8029100 ID=Msa1008090-mRNA-1:five_prime_utr;Parent=Msa1008090-mRNA-1
chr7_1 five_prime_UTR 8028551 8028746 8028551 ID=Msa1008090-mRNA-1:five_prime_utr;Parent=Msa1008090-mRNA-1
chr7_1 five_prime_UTR 8026794 8026848 8026794 ID=Msa1008090-mRNA-1:five_prime_utr;Parent=Msa1008090-mRNA-1
chr7_1 five_prime_UTR 8026429 8026579 8026429 ID=Msa1008090-mRNA-1:five_prime_utr;Parent=Msa1008090-mRNA-1
chr7_1 five_prime_UTR 8025845 8026152 8025845 ID=Msa1008090-mRNA-1:five_prime_utr;Parent=Msa1008090-mRNA-1
chr7_1 five_prime_UTR 8025140 8025405 8025140 ID=Msa1008090-mRNA-1:five_prime_utr;Parent=Msa1008090-mRNA-1
chr7_1 five_prime_UTR 8024408 8024942 8024408 ID=Msa1008090-mRNA-1:five_prime_utr;Parent=Msa1008090-mRNA-1
chr7_1 CDS 8024018 8024407 8024018 ID=Msa1008090-mRNA-1:cds;Parent=Msa1008090-mRNA-1
chr7_1 CDS 8023390 8023644 8023390 ID=Msa1008090-mRNA-1:cds;Parent=Msa1008090-mRNA-1
chr7_1 three_prime_UTR 8023084 8023389 8023084 ID=Msa1008090-mRNA-1:three_prime_utr;Parent=Msa1008090-mRNA-1
Gene Sequence

>Msa1008090

ATGTTGGGTACGAAGAGGGAGGCAGCTTACCGAGACAGTTCGCCGCAGACCTTATGCTGTTATTTGTTTGATGAGATTGAGAAGGCACACTCAGATGTCTTCAACGTATTCCTTCAAATTTTAGATGATGGAAGAGTAACTGACTCACAGGGTCGAACAGTAAGTTTTACCAATACTGTTATCATTATGACCTCAAATGTTGGATCGCAGTACATTCTAAACACGGATGATGACACGGCACCTAAGGAATTAGCCTATGAAACCATAAAGCAGCGGGTAATGGATGCTGCAAGATCCATCTTTCGCCCCGAGTTTATGAATAGAGTTGATGAATATATTGTCTTCCAGCCTCTCGACCGTGATCAAATTAGTAGCATTGTCAGGTTACAGTTGGAGCGTGTGCAGAAGAGAATAGCAGATCGCAAGATGAAAATCCAGGTGACAGATGCTGCCATCCAACTTCTTGGAAGCTTAGGATATGACCCTAACTATGGAGCTAGGCCAGTCAAAAGAGTGATTCAGCAAAATGTGGAGAATGAACTTGCCAAGGGTATTCTGAGAGGAGAATTTAAAGATGAGGACACAATTTTAGTAGACACAGAACTCACAGCATTAGCCAACAATCAACTTCCACAGCAAAACTAG
Protein sequence

>Msa1008090

MLGTKREAAYRDSSPQTLCCYLFDEIEKAHSDVFNVFLQILDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNTDDDTAPKELAYETIKQRVMDAARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLERVQKRIADRKMKIQVTDAAIQLLGSLGYDPNYGARPVKRVIQQNVENELAKGILRGEFKDEDTILVDTELTALANNQLPQQN*