Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1008980 | AES77692.2 | 91.048 | 458 | 41 | 0 | 1 | 458 | 1 | 458 | 0.0 | 868 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1008980 | sp|Q9LRQ8|PMAT2_ARATH | 40.667 | 450 | 227 | 12 | 24 | 458 | 27 | 451 | 4.31e-97 | 302 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1008980 | G7L664 | 91.048 | 458 | 41 | 0 | 1 | 458 | 1 | 458 | 0.0 | 868 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1008980 | Msa1050340 | 0.871351 | 7.301931e-67 | -8.615850e-47 |
| Msa1008980 | Msa1106510 | 0.808893 | 2.475953e-50 | -8.615850e-47 |
| Msa1008980 | Msa1138670 | 0.822832 | 1.918256e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1008980 | MtrunA17_Chr7g0219331 | 91.048 | 458 | 41 | 0 | 1 | 458 | 96 | 553 | 0.0 | 866 |
| Msa1008980 | MtrunA17_Chr7g0219331 | 90.164 | 61 | 6 | 0 | 1 | 61 | 1 | 61 | 3.58e-28 | 117 |
| Msa1008980 | MtrunA17_Chr7g0219301 | 90.591 | 457 | 43 | 0 | 2 | 458 | 4 | 460 | 0.0 | 858 |
| Msa1008980 | MtrunA17_Chr7g0219301 | 88.142 | 253 | 30 | 0 | 206 | 458 | 631 | 883 | 2.60e-156 | 465 |
| Msa1008980 | MtrunA17_Chr7g0219301 | 89.899 | 99 | 10 | 0 | 16 | 114 | 527 | 625 | 2.24e-52 | 189 |
| Msa1008980 | MtrunA17_Chr6g0455341 | 47.639 | 466 | 224 | 9 | 2 | 458 | 8 | 462 | 7.18e-149 | 432 |
| Msa1008980 | MtrunA17_Chr6g0455361 | 47.629 | 464 | 222 | 10 | 3 | 458 | 9 | 459 | 7.10e-146 | 424 |
| Msa1008980 | MtrunA17_Chr7g0219351 | 85.321 | 218 | 32 | 0 | 71 | 288 | 14 | 231 | 1.64e-136 | 392 |
| Msa1008980 | MtrunA17_Chr6g0454761 | 46.436 | 463 | 226 | 11 | 3 | 458 | 9 | 456 | 2.17e-132 | 405 |
| Msa1008980 | MtrunA17_Chr6g0454761 | 47.005 | 434 | 216 | 8 | 30 | 458 | 520 | 944 | 1.02e-130 | 400 |
| Msa1008980 | MtrunA17_Chr6g0455351 | 43.255 | 467 | 206 | 12 | 3 | 458 | 9 | 427 | 1.80e-122 | 363 |
| Msa1008980 | MtrunA17_Chr7g0219181 | 40.842 | 475 | 256 | 11 | 3 | 458 | 9 | 477 | 1.20e-110 | 335 |
| Msa1008980 | MtrunA17_Chr7g0219241 | 40.043 | 467 | 247 | 15 | 12 | 457 | 20 | 474 | 5.08e-104 | 318 |
| Msa1008980 | MtrunA17_Chr7g0219291 | 40.757 | 449 | 250 | 10 | 22 | 458 | 373 | 817 | 5.59e-104 | 327 |
| Msa1008980 | MtrunA17_Chr7g0219291 | 36.842 | 285 | 166 | 10 | 167 | 442 | 35 | 314 | 5.44e-39 | 150 |
| Msa1008980 | MtrunA17_Chr7g0219121 | 38.669 | 481 | 256 | 14 | 3 | 456 | 9 | 477 | 1.05e-98 | 304 |
| Msa1008980 | MtrunA17_Chr7g0219341 | 89.474 | 152 | 16 | 0 | 307 | 458 | 1 | 152 | 1.56e-97 | 289 |
| Msa1008980 | MtrunA17_Chr7g0219311 | 84.354 | 147 | 23 | 0 | 295 | 441 | 1 | 147 | 3.93e-86 | 260 |
| Msa1008980 | MtrunA17_Chr2g0323511 | 36.975 | 476 | 260 | 13 | 3 | 452 | 17 | 478 | 7.22e-85 | 269 |
| Msa1008980 | MtrunA17_Chr3g0087901 | 35.398 | 452 | 261 | 12 | 22 | 456 | 27 | 464 | 7.12e-84 | 265 |
| Msa1008980 | MtrunA17_Chr7g0219881 | 34.947 | 475 | 260 | 11 | 3 | 452 | 6 | 456 | 3.06e-79 | 253 |
| Msa1008980 | MtrunA17_Chr2g0323471 | 36.807 | 451 | 247 | 15 | 22 | 452 | 41 | 473 | 6.10e-79 | 253 |
| Msa1008980 | MtrunA17_Chr8g0339641 | 35.065 | 462 | 270 | 11 | 18 | 456 | 18 | 472 | 7.89e-79 | 253 |
| Msa1008980 | MtrunA17_Chr3g0124341 | 35.637 | 463 | 257 | 12 | 20 | 456 | 25 | 472 | 6.43e-75 | 243 |
| Msa1008980 | MtrunA17_Chr2g0323481 | 34.744 | 449 | 240 | 14 | 39 | 458 | 39 | 463 | 8.50e-72 | 234 |
| Msa1008980 | MtrunA17_Chr3g0083761 | 32.278 | 474 | 275 | 12 | 3 | 452 | 6 | 457 | 6.47e-71 | 232 |
| Msa1008980 | MtrunA17_Chr2g0323421 | 33.970 | 471 | 258 | 16 | 18 | 458 | 64 | 511 | 2.58e-70 | 231 |
| Msa1008980 | MtrunA17_Chr2g0323501 | 33.187 | 455 | 268 | 13 | 26 | 458 | 37 | 477 | 8.68e-69 | 226 |
| Msa1008980 | MtrunA17_Chr7g0219101 | 32.096 | 458 | 228 | 15 | 27 | 457 | 30 | 431 | 2.05e-66 | 219 |
| Msa1008980 | MtrunA17_Chr7g0219211 | 41.367 | 278 | 142 | 7 | 3 | 267 | 10 | 279 | 3.65e-64 | 210 |
| Msa1008980 | MtrunA17_Chr7g0219191 | 45.771 | 201 | 103 | 4 | 22 | 219 | 15 | 212 | 2.03e-53 | 178 |
| Msa1008980 | MtrunA17_Chr6g0454741 | 46.667 | 165 | 82 | 3 | 76 | 239 | 25 | 184 | 1.32e-46 | 161 |
| Msa1008980 | MtrunA17_Chr6g0454741 | 62.745 | 51 | 19 | 0 | 383 | 433 | 185 | 235 | 4.52e-13 | 68.9 |
| Msa1008980 | MtrunA17_Chr3g0092011 | 38.132 | 257 | 134 | 7 | 20 | 262 | 18 | 263 | 1.47e-44 | 157 |
| Msa1008980 | MtrunA17_Chr7g0219251 | 46.250 | 160 | 79 | 2 | 12 | 168 | 18 | 173 | 5.45e-41 | 144 |
| Msa1008980 | MtrunA17_Chr2g0323441 | 44.633 | 177 | 87 | 5 | 1 | 168 | 1 | 175 | 2.87e-36 | 132 |
| Msa1008980 | MtrunA17_Chr7g0219201 | 38.251 | 183 | 108 | 3 | 280 | 457 | 21 | 203 | 6.14e-28 | 110 |
| Msa1008980 | MtrunA17_Chr7g0219221 | 36.478 | 159 | 98 | 3 | 300 | 456 | 1 | 158 | 2.28e-27 | 107 |
| Msa1008980 | MtrunA17_Chr4g0053091 | 25.182 | 413 | 229 | 17 | 26 | 413 | 31 | 388 | 3.79e-20 | 92.4 |
| Msa1008980 | MtrunA17_Chr4g0010381 | 26.429 | 420 | 241 | 15 | 20 | 413 | 18 | 395 | 8.75e-20 | 91.3 |
| Msa1008980 | MtrunA17_Chr3g0087221 | 25.814 | 430 | 252 | 18 | 11 | 413 | 14 | 403 | 1.07e-19 | 91.3 |
| Msa1008980 | MtrunA17_Chr3g0125001 | 26.415 | 424 | 229 | 16 | 20 | 413 | 18 | 388 | 1.14e-19 | 90.9 |
| Msa1008980 | MtrunA17_Chr8g0371821 | 25.065 | 387 | 229 | 16 | 42 | 409 | 39 | 383 | 1.80e-19 | 90.5 |
| Msa1008980 | MtrunA17_Chr2g0334001 | 23.678 | 435 | 264 | 16 | 42 | 452 | 39 | 429 | 1.89e-19 | 90.5 |
| Msa1008980 | MtrunA17_Chr7g0224131 | 25.926 | 405 | 252 | 14 | 20 | 409 | 18 | 389 | 2.48e-19 | 90.1 |
| Msa1008980 | MtrunA17_Chr8g0359251 | 27.252 | 444 | 240 | 19 | 23 | 437 | 26 | 415 | 4.78e-19 | 89.4 |
| Msa1008980 | MtrunA17_Chr3g0134041 | 24.500 | 400 | 259 | 12 | 26 | 412 | 30 | 399 | 1.55e-18 | 87.8 |
| Msa1008980 | MtrunA17_Chr7g0253501 | 26.027 | 438 | 284 | 14 | 43 | 456 | 36 | 457 | 2.15e-18 | 87.4 |
| Msa1008980 | MtrunA17_Chr4g0053111 | 27.230 | 426 | 243 | 20 | 26 | 427 | 27 | 409 | 4.06e-18 | 86.3 |
| Msa1008980 | MtrunA17_Chr4g0053081 | 24.213 | 413 | 243 | 17 | 26 | 413 | 32 | 399 | 1.02e-17 | 85.1 |
| Msa1008980 | MtrunA17_Chr4g0010361 | 27.578 | 417 | 242 | 17 | 20 | 413 | 18 | 397 | 1.42e-16 | 81.6 |
| Msa1008980 | MtrunA17_Chr3g0087401 | 25.455 | 440 | 257 | 17 | 32 | 433 | 21 | 427 | 1.83e-16 | 81.3 |
| Msa1008980 | MtrunA17_Chr3g0134071 | 27.013 | 385 | 228 | 15 | 48 | 412 | 56 | 407 | 3.70e-16 | 80.5 |
| Msa1008980 | MtrunA17_Chr8g0386141 | 25.352 | 355 | 229 | 11 | 62 | 410 | 59 | 383 | 1.11e-15 | 79.0 |
| Msa1008980 | MtrunA17_Chr4g0053061 | 25.180 | 417 | 252 | 18 | 20 | 413 | 51 | 430 | 1.31e-15 | 79.0 |
| Msa1008980 | MtrunA17_Chr8g0374911 | 25.362 | 414 | 247 | 19 | 24 | 413 | 48 | 423 | 2.38e-15 | 78.2 |
| Msa1008980 | MtrunA17_Chr7g0253531 | 25.526 | 333 | 215 | 7 | 43 | 362 | 36 | 348 | 3.37e-15 | 77.4 |
| Msa1008980 | MtrunA17_Chr4g0010331 | 25.000 | 408 | 257 | 14 | 20 | 413 | 18 | 390 | 5.99e-14 | 73.6 |
| Msa1008980 | MtrunA17_Chr4g0010311 | 24.762 | 420 | 249 | 16 | 20 | 413 | 18 | 396 | 8.99e-14 | 73.2 |
| Msa1008980 | MtrunA17_Chr4g0072041 | 23.810 | 462 | 289 | 18 | 24 | 456 | 33 | 460 | 1.71e-13 | 72.4 |
| Msa1008980 | MtrunA17_Chr7g0253541 | 23.990 | 421 | 271 | 13 | 62 | 456 | 60 | 457 | 2.80e-13 | 71.6 |
| Msa1008980 | MtrunA17_Chr4g0010121 | 24.292 | 424 | 241 | 16 | 20 | 413 | 63 | 436 | 5.76e-12 | 67.8 |
| Msa1008980 | MtrunA17_Chr3g0092001 | 34.483 | 116 | 71 | 3 | 344 | 458 | 8 | 119 | 2.57e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1008980 | AT3G29670.1 | 40.667 | 450 | 227 | 12 | 24 | 458 | 27 | 451 | 4.38e-98 | 302 |
| Msa1008980 | AT5G39090.1 | 38.445 | 463 | 251 | 11 | 5 | 456 | 8 | 447 | 6.20e-96 | 296 |
| Msa1008980 | AT5G39080.1 | 38.280 | 465 | 257 | 12 | 4 | 452 | 7 | 457 | 1.85e-95 | 296 |
| Msa1008980 | AT5G39050.1 | 38.983 | 472 | 255 | 13 | 3 | 456 | 11 | 467 | 3.43e-95 | 295 |
| Msa1008980 | AT3G29635.1 | 40.402 | 448 | 232 | 13 | 24 | 456 | 27 | 454 | 2.86e-94 | 292 |
| Msa1008980 | AT5G61160.1 | 36.842 | 475 | 255 | 14 | 3 | 458 | 4 | 452 | 2.67e-89 | 279 |
| Msa1008980 | AT3G29680.1 | 40.271 | 442 | 230 | 13 | 24 | 452 | 23 | 443 | 6.33e-89 | 278 |
| Msa1008980 | AT3G29590.1 | 37.953 | 469 | 245 | 15 | 4 | 456 | 10 | 448 | 1.79e-87 | 275 |
| Msa1008980 | AT1G03940.1 | 34.375 | 480 | 265 | 17 | 3 | 456 | 9 | 464 | 1.60e-77 | 249 |
| Msa1008980 | AT1G03495.1 | 35.976 | 328 | 178 | 11 | 20 | 331 | 24 | 335 | 6.97e-55 | 186 |
| Msa1008980 | AT3G29720.1 | 38.647 | 207 | 107 | 5 | 99 | 299 | 26 | 218 | 2.60e-32 | 122 |
| Msa1008980 | AT2G19070.1 | 23.543 | 446 | 282 | 12 | 39 | 456 | 37 | 451 | 3.42e-22 | 99.4 |
| Msa1008980 | AT5G23940.1 | 25.618 | 445 | 255 | 16 | 26 | 436 | 25 | 427 | 7.40e-21 | 95.5 |
| Msa1008980 | AT3G29690.1 | 34.868 | 152 | 79 | 6 | 312 | 455 | 38 | 177 | 1.05e-16 | 78.6 |
| Msa1008980 | AT5G48930.1 | 22.912 | 419 | 280 | 15 | 42 | 448 | 39 | 426 | 2.54e-16 | 81.3 |
| Msa1008980 | AT3G47170.1 | 25.177 | 282 | 175 | 9 | 62 | 328 | 70 | 330 | 1.72e-15 | 79.0 |
| Msa1008980 | AT5G67160.1 | 23.188 | 414 | 258 | 10 | 11 | 409 | 14 | 382 | 5.12e-15 | 77.4 |
| Msa1008980 | AT5G42830.1 | 24.515 | 412 | 255 | 16 | 18 | 408 | 20 | 396 | 8.47e-15 | 76.6 |
| Msa1008980 | AT5G07850.1 | 24.570 | 407 | 256 | 12 | 26 | 413 | 31 | 405 | 1.90e-14 | 75.5 |
| Msa1008980 | AT2G39980.1 | 24.433 | 397 | 237 | 16 | 58 | 413 | 58 | 432 | 4.21e-14 | 74.7 |
| Msa1008980 | AT5G38130.1 | 26.024 | 415 | 249 | 18 | 29 | 425 | 52 | 426 | 2.56e-13 | 72.0 |
| Msa1008980 | AT5G41040.2 | 23.823 | 361 | 227 | 14 | 62 | 409 | 69 | 394 | 3.34e-13 | 71.6 |
| Msa1008980 | AT1G31490.1 | 24.129 | 402 | 246 | 15 | 23 | 409 | 26 | 383 | 3.82e-13 | 71.6 |
| Msa1008980 | AT5G41040.1 | 23.823 | 361 | 227 | 14 | 62 | 409 | 85 | 410 | 4.01e-13 | 71.6 |
| Msa1008980 | AT1G28680.1 | 23.958 | 288 | 183 | 6 | 62 | 342 | 62 | 320 | 7.97e-13 | 70.5 |
| Msa1008980 | AT1G28680.2 | 23.875 | 289 | 184 | 6 | 62 | 343 | 62 | 321 | 8.48e-13 | 70.1 |
| Msa1008980 | AT1G24430.1 | 22.273 | 440 | 275 | 13 | 26 | 450 | 29 | 416 | 1.66e-12 | 69.7 |
| Msa1008980 | AT5G07860.1 | 24.590 | 366 | 232 | 13 | 54 | 408 | 64 | 396 | 3.95e-12 | 68.6 |
| Msa1008980 | AT3G48720.1 | 22.222 | 378 | 253 | 13 | 39 | 409 | 41 | 384 | 1.09e-11 | 67.0 |
| Msa1008980 | AT1G03390.1 | 21.859 | 398 | 263 | 13 | 42 | 425 | 59 | 422 | 1.42e-11 | 66.6 |
Find 77 sgRNAs with CRISPR-Local
Find 188 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGATTCCTACAACATATTT+TGG | 0.090584 | 7_1:-9755246 | Msa1008980:CDS |
| TTTGAAACAAGTGAATTATT+TGG | 0.202070 | 7_1:-9755195 | Msa1008980:CDS |
| AGTGAATTATTTGGAGAAAA+TGG | 0.206523 | 7_1:-9755186 | Msa1008980:CDS |
| GCTGATTTCAATCATTTATC+TGG | 0.253026 | 7_1:-9755882 | Msa1008980:CDS |
| GAAACCATTTCAACTTTCTT+TGG | 0.266966 | 7_1:+9754979 | None:intergenic |
| TTACTTTCTTTGACATACTA+TGG | 0.279036 | 7_1:-9756127 | Msa1008980:CDS |
| GTACTATAAACCTCAAATTT+AGG | 0.281913 | 7_1:+9755021 | None:intergenic |
| ACATGATCAAGCTTCTGTTT+TGG | 0.289012 | 7_1:-9755802 | Msa1008980:CDS |
| AACCAACAATAGAAGCTTAA+TGG | 0.299594 | 7_1:-9755520 | Msa1008980:CDS |
| GGAAAGTGATTGTTTCAGTT+TGG | 0.300850 | 7_1:+9756025 | None:intergenic |
| CCAATTGAAAATCCATAGTT+TGG | 0.315948 | 7_1:+9755759 | None:intergenic |
| AGGCAAAATATTTGAGTGAT+TGG | 0.316985 | 7_1:-9755557 | Msa1008980:CDS |
| CCCTTGATGAATTTGATGAT+TGG | 0.320166 | 7_1:+9755939 | None:intergenic |
| GTTCCAAATGATTCATTTAG+AGG | 0.320989 | 7_1:-9755483 | Msa1008980:CDS |
| ACAATAGAAGCTTAATGGTT+TGG | 0.327026 | 7_1:-9755515 | Msa1008980:CDS |
| AACCATTAAGCTTCTATTGT+TGG | 0.335300 | 7_1:+9755518 | None:intergenic |
| CAATAGAAGCTTAATGGTTT+GGG | 0.346870 | 7_1:-9755514 | Msa1008980:CDS |
| GAAAGTGATTGTTTCAGTTT+GGG | 0.346989 | 7_1:+9756026 | None:intergenic |
| TGTCTTTCTGATTGTAGAAA+TGG | 0.347109 | 7_1:-9754934 | Msa1008980:CDS |
| GAGGTTTATAGTACTGATTT+TGG | 0.352559 | 7_1:-9755012 | Msa1008980:CDS |
| CCAAAATATGTTGTAGGAAT+CGG | 0.355820 | 7_1:+9755246 | None:intergenic |
| GAGCTGAAAATTGGTCTTCA+TGG | 0.367514 | 7_1:-9755098 | Msa1008980:CDS |
| ATTGGTTTGTGAGAATCATT+AGG | 0.380290 | 7_1:+9755957 | None:intergenic |
| TGCTGGTTCACCTAAATTTG+AGG | 0.384622 | 7_1:-9755031 | Msa1008980:CDS |
| CAATTTCCAAAATATGTTGT+AGG | 0.386192 | 7_1:+9755240 | None:intergenic |
| CAAGGATCCAAATGAATTAG+AGG | 0.386216 | 7_1:-9755577 | Msa1008980:CDS |
| TCTTCACTTGTCAACATTTG+TGG | 0.387843 | 7_1:-9755373 | Msa1008980:CDS |
| AACCCTCTAAATGAATCATT+TGG | 0.391425 | 7_1:+9755480 | None:intergenic |
| TCATGTGAAATATTCAAGTT+AGG | 0.394263 | 7_1:+9755819 | None:intergenic |
| ATTACCGATGTTAAAGCAAT+TGG | 0.395582 | 7_1:-9755057 | Msa1008980:CDS |
| TAGAAGAAAATTCTTTGAAC+AGG | 0.399183 | 7_1:+9756092 | None:intergenic |
| GTTATTTCAATTATCTCGTT+CGG | 0.405831 | 7_1:-9755460 | Msa1008980:CDS |
| ATTTGTAGTGTCAAAACAAA+AGG | 0.406667 | 7_1:-9755418 | Msa1008980:CDS |
| ATTGTTTCAGTTTGGGAAGA+AGG | 0.422104 | 7_1:+9756033 | None:intergenic |
| TGAAGTGTTGAGTGAAGCTT+TGG | 0.425405 | 7_1:-9755148 | Msa1008980:CDS |
| TGGTCTTCATGGTTACTTGA+AGG | 0.428251 | 7_1:-9755087 | Msa1008980:CDS |
| TGGCTTTGAATATCGATTGC+CGG | 0.431534 | 7_1:-9755284 | Msa1008980:CDS |
| AAAACCAAAGAAAGTTGAAA+TGG | 0.434697 | 7_1:-9754983 | Msa1008980:CDS |
| TTCGGAGATCGAAAAGCTTA+AGG | 0.435179 | 7_1:-9755442 | Msa1008980:CDS |
| AATGGTGATGGTGTTGAGAT+AGG | 0.443549 | 7_1:-9754916 | Msa1008980:CDS |
| AGTATGTCAAAGAAAGTAAG+AGG | 0.444791 | 7_1:+9756131 | None:intergenic |
| AATTGCTTTAACATCGGTAA+TGG | 0.446233 | 7_1:+9755059 | None:intergenic |
| TGTTGAATGGAGCTGAAAAT+TGG | 0.446827 | 7_1:-9755107 | Msa1008980:CDS |
| TCGGCTGATCTAAACGATTC+CGG | 0.447477 | 7_1:+9755265 | None:intergenic |
| ATAAAGAATGGAGTGTTGAA+TGG | 0.475613 | 7_1:-9755120 | Msa1008980:CDS |
| ACCAATCATCAAATTCATCA+AGG | 0.476412 | 7_1:-9755940 | Msa1008980:CDS |
| AAATTCTTGTGGCAAACAAA+GGG | 0.476984 | 7_1:+9755626 | None:intergenic |
| ATGGTTTCAATAGATAGAAC+TGG | 0.486257 | 7_1:-9754964 | Msa1008980:CDS |
| TATTGAAGAAATGTGAGGTT+TGG | 0.494665 | 7_1:+9756057 | None:intergenic |
| TGTCAAAACAAAAGGGTACT+AGG | 0.501108 | 7_1:-9755410 | Msa1008980:CDS |
| AAGAAAATTCTTTGAACAGG+TGG | 0.502827 | 7_1:+9756095 | None:intergenic |
| TTTGCTTCGCTCTTTGTCAA+AGG | 0.503257 | 7_1:-9754862 | Msa1008980:CDS |
| AGAGGAAGTGAGGTTTCTGA+AGG | 0.503348 | 7_1:+9756149 | None:intergenic |
| GTTAAAGCAATTGGTGCTGC+TGG | 0.503742 | 7_1:-9755048 | Msa1008980:CDS |
| TTGTTTCAGTTTGGGAAGAA+GGG | 0.508467 | 7_1:+9756034 | None:intergenic |
| TTCCAAATGATTCATTTAGA+GGG | 0.515033 | 7_1:-9755482 | Msa1008980:CDS |
| AAAGAAAGTAAGAGGAAGTG+AGG | 0.516885 | 7_1:+9756139 | None:intergenic |
| GGTAGTTCTTCTTGTGAAGA+TGG | 0.518675 | 7_1:+9756170 | None:intergenic |
| CTATGATAGAAAAGTAATCA+AGG | 0.519078 | 7_1:-9755595 | Msa1008980:CDS |
| GGTATCTATTGCTTATGCAT+TGG | 0.520850 | 7_1:-9755352 | Msa1008980:CDS |
| AAAATTCTTGTGGCAAACAA+AGG | 0.522274 | 7_1:+9755625 | None:intergenic |
| TTGAGTGATTGGTTAAAGCA+AGG | 0.525666 | 7_1:-9755546 | Msa1008980:CDS |
| GCTTTGGAAACTATAAAGAA+TGG | 0.532473 | 7_1:-9755132 | Msa1008980:CDS |
| TCTACAATCAGAAAGACAAA+AGG | 0.534606 | 7_1:+9754939 | None:intergenic |
| AGCACCAATTGCTTTAACAT+CGG | 0.552039 | 7_1:+9755053 | None:intergenic |
| TTTGTAGTGTCAAAACAAAA+GGG | 0.558518 | 7_1:-9755417 | Msa1008980:CDS |
| TGGAGAAAATGGACTAATTG+TGG | 0.575913 | 7_1:-9755175 | Msa1008980:CDS |
| CCAATCATCAAATTCATCAA+GGG | 0.585572 | 7_1:-9755939 | Msa1008980:CDS |
| CAAATGAGATGACCCAAAAG+AGG | 0.588902 | 7_1:+9755981 | None:intergenic |
| TAGAAAGGACAAAATTCTTG+TGG | 0.597031 | 7_1:+9755615 | None:intergenic |
| TCTGATTGTAGAAATGGTGA+TGG | 0.615354 | 7_1:-9754928 | Msa1008980:CDS |
| AGTGATTGGTTAAAGCAAGG+TGG | 0.623091 | 7_1:-9755543 | Msa1008980:CDS |
| ATAAAAGTGAGAAAGTGCAA+TGG | 0.624999 | 7_1:+9756004 | None:intergenic |
| ATCAGCATGAGATTCAGCTA+TGG | 0.626225 | 7_1:+9755899 | None:intergenic |
| AAGAAATGTGAGGTTTGGTG+TGG | 0.632754 | 7_1:+9756062 | None:intergenic |
| AATTCTTGTGGCAAACAAAG+GGG | 0.665834 | 7_1:+9755627 | None:intergenic |
| AAGGGTATTGAAGAAATGTG+AGG | 0.671198 | 7_1:+9756052 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATCATAGAAATTTTCAA+TGG | - | chr7_1:9754855-9754874 | Msa1008980:CDS | 15.0% |
| !!! | AAAATCATAGAAATTTTCAA+TGG | - | chr7_1:9754855-9754874 | Msa1008980:CDS | 15.0% |
| !!! | AACTTCTTTTATCAAATCTT+GGG | - | chr7_1:9755355-9755374 | Msa1008980:CDS | 20.0% |
| !!! | ATTACTTTTCTATCATAGAA+AGG | + | chr7_1:9755455-9755474 | None:intergenic | 20.0% |
| !!! | ACATATTTTGGAAATTGTAT+TGG | - | chr7_1:9755818-9755837 | Msa1008980:CDS | 20.0% |
| !!! | TTTGAAACAAGTGAATTATT+TGG | - | chr7_1:9755857-9755876 | Msa1008980:CDS | 20.0% |
| !!! | AACTTCTTTTATCAAATCTT+GGG | - | chr7_1:9755355-9755374 | Msa1008980:CDS | 20.0% |
| !!! | ATTACTTTTCTATCATAGAA+AGG | + | chr7_1:9755455-9755474 | None:intergenic | 20.0% |
| !!! | ACATATTTTGGAAATTGTAT+TGG | - | chr7_1:9755818-9755837 | Msa1008980:CDS | 20.0% |
| !!! | TTTGAAACAAGTGAATTATT+TGG | - | chr7_1:9755857-9755876 | Msa1008980:CDS | 20.0% |
| ! | TTACTTTCTTTGACATACTA+TGG | - | chr7_1:9754925-9754944 | Msa1008980:CDS | 25.0% |
| ! | TAGAAGAAAATTCTTTGAAC+AGG | + | chr7_1:9754963-9754982 | None:intergenic | 25.0% |
| !! | TCATGTGAAATATTCAAGTT+AGG | + | chr7_1:9755236-9755255 | None:intergenic | 25.0% |
| ! | AAATCCATAGTTTGGAAAAA+CGG | + | chr7_1:9755288-9755307 | None:intergenic | 25.0% |
| !! | CAACTTCTTTTATCAAATCT+TGG | - | chr7_1:9755354-9755373 | Msa1008980:CDS | 25.0% |
| ! | CTATGATAGAAAAGTAATCA+AGG | - | chr7_1:9755457-9755476 | Msa1008980:CDS | 25.0% |
| !! | TATTTTGCCTCTAATTCATT+TGG | + | chr7_1:9755485-9755504 | None:intergenic | 25.0% |
| ! | TTCCAAATGATTCATTTAGA+GGG | - | chr7_1:9755570-9755589 | Msa1008980:CDS | 25.0% |
| !! | GTTATTTCAATTATCTCGTT+CGG | - | chr7_1:9755592-9755611 | Msa1008980:CDS | 25.0% |
| ! | ATTTGTAGTGTCAAAACAAA+AGG | - | chr7_1:9755634-9755653 | Msa1008980:CDS | 25.0% |
| ! | TTTGTAGTGTCAAAACAAAA+GGG | - | chr7_1:9755635-9755654 | Msa1008980:CDS | 25.0% |
| ! | CAATTTCCAAAATATGTTGT+AGG | + | chr7_1:9755815-9755834 | None:intergenic | 25.0% |
| !!! | TATTTTGGAAATTGTATTGG+AGG | - | chr7_1:9755821-9755840 | Msa1008980:CDS | 25.0% |
| ! | AGTGAATTATTTGGAGAAAA+TGG | - | chr7_1:9755866-9755885 | Msa1008980:CDS | 25.0% |
| ! | GTACTATAAACCTCAAATTT+AGG | + | chr7_1:9756034-9756053 | None:intergenic | 25.0% |
| ! | AAAACCAAAGAAAGTTGAAA+TGG | - | chr7_1:9756069-9756088 | Msa1008980:CDS | 25.0% |
| ! | TTACTTTCTTTGACATACTA+TGG | - | chr7_1:9754925-9754944 | Msa1008980:CDS | 25.0% |
| ! | TAGAAGAAAATTCTTTGAAC+AGG | + | chr7_1:9754963-9754982 | None:intergenic | 25.0% |
| !! | TCATGTGAAATATTCAAGTT+AGG | + | chr7_1:9755236-9755255 | None:intergenic | 25.0% |
| ! | AAATCCATAGTTTGGAAAAA+CGG | + | chr7_1:9755288-9755307 | None:intergenic | 25.0% |
| !! | CAACTTCTTTTATCAAATCT+TGG | - | chr7_1:9755354-9755373 | Msa1008980:CDS | 25.0% |
| ! | CTATGATAGAAAAGTAATCA+AGG | - | chr7_1:9755457-9755476 | Msa1008980:CDS | 25.0% |
| !! | TATTTTGCCTCTAATTCATT+TGG | + | chr7_1:9755485-9755504 | None:intergenic | 25.0% |
| ! | TTCCAAATGATTCATTTAGA+GGG | - | chr7_1:9755570-9755589 | Msa1008980:CDS | 25.0% |
| !! | GTTATTTCAATTATCTCGTT+CGG | - | chr7_1:9755592-9755611 | Msa1008980:CDS | 25.0% |
| ! | ATTTGTAGTGTCAAAACAAA+AGG | - | chr7_1:9755634-9755653 | Msa1008980:CDS | 25.0% |
| ! | TTTGTAGTGTCAAAACAAAA+GGG | - | chr7_1:9755635-9755654 | Msa1008980:CDS | 25.0% |
| ! | CAATTTCCAAAATATGTTGT+AGG | + | chr7_1:9755815-9755834 | None:intergenic | 25.0% |
| !!! | TATTTTGGAAATTGTATTGG+AGG | - | chr7_1:9755821-9755840 | Msa1008980:CDS | 25.0% |
| ! | AGTGAATTATTTGGAGAAAA+TGG | - | chr7_1:9755866-9755885 | Msa1008980:CDS | 25.0% |
| ! | GTACTATAAACCTCAAATTT+AGG | + | chr7_1:9756034-9756053 | None:intergenic | 25.0% |
| ! | AAAACCAAAGAAAGTTGAAA+TGG | - | chr7_1:9756069-9756088 | Msa1008980:CDS | 25.0% |
| AGTATGTCAAAGAAAGTAAG+AGG | + | chr7_1:9754924-9754943 | None:intergenic | 30.0% | |
| AAGAAAATTCTTTGAACAGG+TGG | + | chr7_1:9754960-9754979 | None:intergenic | 30.0% | |
| TATTGAAGAAATGTGAGGTT+TGG | + | chr7_1:9754998-9755017 | None:intergenic | 30.0% | |
| GAAAGTGATTGTTTCAGTTT+GGG | + | chr7_1:9755029-9755048 | None:intergenic | 30.0% | |
| ! | ATAAAAGTGAGAAAGTGCAA+TGG | + | chr7_1:9755051-9755070 | None:intergenic | 30.0% |
| !! | TTCTCACTTTTATCCTCTTT+TGG | - | chr7_1:9755058-9755077 | Msa1008980:CDS | 30.0% |
| !! | TCTCACTTTTATCCTCTTTT+GGG | - | chr7_1:9755059-9755078 | Msa1008980:CDS | 30.0% |
| !! | ATTGGTTTGTGAGAATCATT+AGG | + | chr7_1:9755098-9755117 | None:intergenic | 30.0% |
| ACCAATCATCAAATTCATCA+AGG | - | chr7_1:9755112-9755131 | Msa1008980:CDS | 30.0% | |
| CCAATCATCAAATTCATCAA+GGG | - | chr7_1:9755113-9755132 | Msa1008980:CDS | 30.0% | |
| ! | GCTGATTTCAATCATTTATC+TGG | - | chr7_1:9755170-9755189 | Msa1008980:CDS | 30.0% |
| CCAATTGAAAATCCATAGTT+TGG | + | chr7_1:9755296-9755315 | None:intergenic | 30.0% | |
| ! | CCAAACTATGGATTTTCAAT+TGG | - | chr7_1:9755293-9755312 | Msa1008980:CDS | 30.0% |
| AAATTCTTGTGGCAAACAAA+GGG | + | chr7_1:9755429-9755448 | None:intergenic | 30.0% | |
| AAAATTCTTGTGGCAAACAA+AGG | + | chr7_1:9755430-9755449 | None:intergenic | 30.0% | |
| TAGAAAGGACAAAATTCTTG+TGG | + | chr7_1:9755440-9755459 | None:intergenic | 30.0% | |
| AGGCAAAATATTTGAGTGAT+TGG | - | chr7_1:9755495-9755514 | Msa1008980:CDS | 30.0% | |
| AACCAACAATAGAAGCTTAA+TGG | - | chr7_1:9755532-9755551 | Msa1008980:CDS | 30.0% | |
| AACCATTAAGCTTCTATTGT+TGG | + | chr7_1:9755537-9755556 | None:intergenic | 30.0% | |
| ACAATAGAAGCTTAATGGTT+TGG | - | chr7_1:9755537-9755556 | Msa1008980:CDS | 30.0% | |
| CAATAGAAGCTTAATGGTTT+GGG | - | chr7_1:9755538-9755557 | Msa1008980:CDS | 30.0% | |
| GTTCCAAATGATTCATTTAG+AGG | - | chr7_1:9755569-9755588 | Msa1008980:CDS | 30.0% | |
| AACCCTCTAAATGAATCATT+TGG | + | chr7_1:9755575-9755594 | None:intergenic | 30.0% | |
| TGAGAACAAAAATGTTGTGA+TGG | - | chr7_1:9755748-9755767 | Msa1008980:CDS | 30.0% | |
| CCAAAATATGTTGTAGGAAT+CGG | + | chr7_1:9755809-9755828 | None:intergenic | 30.0% | |
| !! | GCTTTGGAAACTATAAAGAA+TGG | - | chr7_1:9755920-9755939 | Msa1008980:CDS | 30.0% |
| !! | ATAAAGAATGGAGTGTTGAA+TGG | - | chr7_1:9755932-9755951 | Msa1008980:CDS | 30.0% |
| AATTGCTTTAACATCGGTAA+TGG | + | chr7_1:9755996-9756015 | None:intergenic | 30.0% | |
| ATTACCGATGTTAAAGCAAT+TGG | - | chr7_1:9755995-9756014 | Msa1008980:CDS | 30.0% | |
| !!! | GAGGTTTATAGTACTGATTT+TGG | - | chr7_1:9756040-9756059 | Msa1008980:CDS | 30.0% |
| !!! | TATAGTACTGATTTTGGTTG+TGG | - | chr7_1:9756046-9756065 | Msa1008980:CDS | 30.0% |
| GAAACCATTTCAACTTTCTT+TGG | + | chr7_1:9756076-9756095 | None:intergenic | 30.0% | |
| ATGGTTTCAATAGATAGAAC+TGG | - | chr7_1:9756088-9756107 | Msa1008980:CDS | 30.0% | |
| TCTACAATCAGAAAGACAAA+AGG | + | chr7_1:9756116-9756135 | None:intergenic | 30.0% | |
| TGTCTTTCTGATTGTAGAAA+TGG | - | chr7_1:9756118-9756137 | Msa1008980:CDS | 30.0% | |
| TGTGTCTAACAAAAAAGCAA+TGG | - | chr7_1:9756162-9756181 | Msa1008980:CDS | 30.0% | |
| AGTATGTCAAAGAAAGTAAG+AGG | + | chr7_1:9754924-9754943 | None:intergenic | 30.0% | |
| AAGAAAATTCTTTGAACAGG+TGG | + | chr7_1:9754960-9754979 | None:intergenic | 30.0% | |
| TATTGAAGAAATGTGAGGTT+TGG | + | chr7_1:9754998-9755017 | None:intergenic | 30.0% | |
| GAAAGTGATTGTTTCAGTTT+GGG | + | chr7_1:9755029-9755048 | None:intergenic | 30.0% | |
| ! | ATAAAAGTGAGAAAGTGCAA+TGG | + | chr7_1:9755051-9755070 | None:intergenic | 30.0% |
| !! | TTCTCACTTTTATCCTCTTT+TGG | - | chr7_1:9755058-9755077 | Msa1008980:CDS | 30.0% |
| !! | TCTCACTTTTATCCTCTTTT+GGG | - | chr7_1:9755059-9755078 | Msa1008980:CDS | 30.0% |
| !! | ATTGGTTTGTGAGAATCATT+AGG | + | chr7_1:9755098-9755117 | None:intergenic | 30.0% |
| ACCAATCATCAAATTCATCA+AGG | - | chr7_1:9755112-9755131 | Msa1008980:CDS | 30.0% | |
| CCAATCATCAAATTCATCAA+GGG | - | chr7_1:9755113-9755132 | Msa1008980:CDS | 30.0% | |
| ! | GCTGATTTCAATCATTTATC+TGG | - | chr7_1:9755170-9755189 | Msa1008980:CDS | 30.0% |
| CCAATTGAAAATCCATAGTT+TGG | + | chr7_1:9755296-9755315 | None:intergenic | 30.0% | |
| ! | CCAAACTATGGATTTTCAAT+TGG | - | chr7_1:9755293-9755312 | Msa1008980:CDS | 30.0% |
| AAATTCTTGTGGCAAACAAA+GGG | + | chr7_1:9755429-9755448 | None:intergenic | 30.0% | |
| AAAATTCTTGTGGCAAACAA+AGG | + | chr7_1:9755430-9755449 | None:intergenic | 30.0% | |
| TAGAAAGGACAAAATTCTTG+TGG | + | chr7_1:9755440-9755459 | None:intergenic | 30.0% | |
| AGGCAAAATATTTGAGTGAT+TGG | - | chr7_1:9755495-9755514 | Msa1008980:CDS | 30.0% | |
| AACCAACAATAGAAGCTTAA+TGG | - | chr7_1:9755532-9755551 | Msa1008980:CDS | 30.0% | |
| AACCATTAAGCTTCTATTGT+TGG | + | chr7_1:9755537-9755556 | None:intergenic | 30.0% | |
| ACAATAGAAGCTTAATGGTT+TGG | - | chr7_1:9755537-9755556 | Msa1008980:CDS | 30.0% | |
| CAATAGAAGCTTAATGGTTT+GGG | - | chr7_1:9755538-9755557 | Msa1008980:CDS | 30.0% | |
| GTTCCAAATGATTCATTTAG+AGG | - | chr7_1:9755569-9755588 | Msa1008980:CDS | 30.0% | |
| AACCCTCTAAATGAATCATT+TGG | + | chr7_1:9755575-9755594 | None:intergenic | 30.0% | |
| TGAGAACAAAAATGTTGTGA+TGG | - | chr7_1:9755748-9755767 | Msa1008980:CDS | 30.0% | |
| CCAAAATATGTTGTAGGAAT+CGG | + | chr7_1:9755809-9755828 | None:intergenic | 30.0% | |
| !! | GCTTTGGAAACTATAAAGAA+TGG | - | chr7_1:9755920-9755939 | Msa1008980:CDS | 30.0% |
| !! | ATAAAGAATGGAGTGTTGAA+TGG | - | chr7_1:9755932-9755951 | Msa1008980:CDS | 30.0% |
| AATTGCTTTAACATCGGTAA+TGG | + | chr7_1:9755996-9756015 | None:intergenic | 30.0% | |
| ATTACCGATGTTAAAGCAAT+TGG | - | chr7_1:9755995-9756014 | Msa1008980:CDS | 30.0% | |
| !!! | GAGGTTTATAGTACTGATTT+TGG | - | chr7_1:9756040-9756059 | Msa1008980:CDS | 30.0% |
| !!! | TATAGTACTGATTTTGGTTG+TGG | - | chr7_1:9756046-9756065 | Msa1008980:CDS | 30.0% |
| GAAACCATTTCAACTTTCTT+TGG | + | chr7_1:9756076-9756095 | None:intergenic | 30.0% | |
| ATGGTTTCAATAGATAGAAC+TGG | - | chr7_1:9756088-9756107 | Msa1008980:CDS | 30.0% | |
| TCTACAATCAGAAAGACAAA+AGG | + | chr7_1:9756116-9756135 | None:intergenic | 30.0% | |
| TGTCTTTCTGATTGTAGAAA+TGG | - | chr7_1:9756118-9756137 | Msa1008980:CDS | 30.0% | |
| TGTGTCTAACAAAAAAGCAA+TGG | - | chr7_1:9756162-9756181 | Msa1008980:CDS | 30.0% | |
| AAAGAAAGTAAGAGGAAGTG+AGG | + | chr7_1:9754916-9754935 | None:intergenic | 35.0% | |
| !! | AAGGGTATTGAAGAAATGTG+AGG | + | chr7_1:9755003-9755022 | None:intergenic | 35.0% |
| TTGTTTCAGTTTGGGAAGAA+GGG | + | chr7_1:9755021-9755040 | None:intergenic | 35.0% | |
| ATTGTTTCAGTTTGGGAAGA+AGG | + | chr7_1:9755022-9755041 | None:intergenic | 35.0% | |
| GGAAAGTGATTGTTTCAGTT+TGG | + | chr7_1:9755030-9755049 | None:intergenic | 35.0% | |
| ! | CCCTTGATGAATTTGATGAT+TGG | + | chr7_1:9755116-9755135 | None:intergenic | 35.0% |
| ! | ACATGATCAAGCTTCTGTTT+TGG | - | chr7_1:9755250-9755269 | Msa1008980:CDS | 35.0% |
| !! | GTTACCGTTTTTCCAAACTA+TGG | - | chr7_1:9755281-9755300 | Msa1008980:CDS | 35.0% |
| !!! | TCACATCATGCTGTTTTAGA+TGG | - | chr7_1:9755323-9755342 | Msa1008980:CDS | 35.0% |
| AATTCTTGTGGCAAACAAAG+GGG | + | chr7_1:9755428-9755447 | None:intergenic | 35.0% | |
| CAAGGATCCAAATGAATTAG+AGG | - | chr7_1:9755475-9755494 | Msa1008980:CDS | 35.0% | |
| ! | TTGAGTGATTGGTTAAAGCA+AGG | - | chr7_1:9755506-9755525 | Msa1008980:CDS | 35.0% |
| !! | TGTCAAAACAAAAGGGTACT+AGG | - | chr7_1:9755642-9755661 | Msa1008980:CDS | 35.0% |
| TCTTCACTTGTCAACATTTG+TGG | - | chr7_1:9755679-9755698 | Msa1008980:CDS | 35.0% | |
| GGTATCTATTGCTTATGCAT+TGG | - | chr7_1:9755700-9755719 | Msa1008980:CDS | 35.0% | |
| ! | CCGATTCCTACAACATATTT+TGG | - | chr7_1:9755806-9755825 | Msa1008980:CDS | 35.0% |
| !! | TGGAGAAAATGGACTAATTG+TGG | - | chr7_1:9755877-9755896 | Msa1008980:CDS | 35.0% |
| TGTTGAATGGAGCTGAAAAT+TGG | - | chr7_1:9755945-9755964 | Msa1008980:CDS | 35.0% | |
| AGCACCAATTGCTTTAACAT+CGG | + | chr7_1:9756002-9756021 | None:intergenic | 35.0% | |
| TCTGATTGTAGAAATGGTGA+TGG | - | chr7_1:9756124-9756143 | Msa1008980:CDS | 35.0% | |
| AAAGAAAGTAAGAGGAAGTG+AGG | + | chr7_1:9754916-9754935 | None:intergenic | 35.0% | |
| !! | AAGGGTATTGAAGAAATGTG+AGG | + | chr7_1:9755003-9755022 | None:intergenic | 35.0% |
| TTGTTTCAGTTTGGGAAGAA+GGG | + | chr7_1:9755021-9755040 | None:intergenic | 35.0% | |
| ATTGTTTCAGTTTGGGAAGA+AGG | + | chr7_1:9755022-9755041 | None:intergenic | 35.0% | |
| GGAAAGTGATTGTTTCAGTT+TGG | + | chr7_1:9755030-9755049 | None:intergenic | 35.0% | |
| ! | CCCTTGATGAATTTGATGAT+TGG | + | chr7_1:9755116-9755135 | None:intergenic | 35.0% |
| ! | ACATGATCAAGCTTCTGTTT+TGG | - | chr7_1:9755250-9755269 | Msa1008980:CDS | 35.0% |
| !! | GTTACCGTTTTTCCAAACTA+TGG | - | chr7_1:9755281-9755300 | Msa1008980:CDS | 35.0% |
| !!! | TCACATCATGCTGTTTTAGA+TGG | - | chr7_1:9755323-9755342 | Msa1008980:CDS | 35.0% |
| AATTCTTGTGGCAAACAAAG+GGG | + | chr7_1:9755428-9755447 | None:intergenic | 35.0% | |
| CAAGGATCCAAATGAATTAG+AGG | - | chr7_1:9755475-9755494 | Msa1008980:CDS | 35.0% | |
| ! | TTGAGTGATTGGTTAAAGCA+AGG | - | chr7_1:9755506-9755525 | Msa1008980:CDS | 35.0% |
| !! | TGTCAAAACAAAAGGGTACT+AGG | - | chr7_1:9755642-9755661 | Msa1008980:CDS | 35.0% |
| TCTTCACTTGTCAACATTTG+TGG | - | chr7_1:9755679-9755698 | Msa1008980:CDS | 35.0% | |
| GGTATCTATTGCTTATGCAT+TGG | - | chr7_1:9755700-9755719 | Msa1008980:CDS | 35.0% | |
| ! | CCGATTCCTACAACATATTT+TGG | - | chr7_1:9755806-9755825 | Msa1008980:CDS | 35.0% |
| !! | TGGAGAAAATGGACTAATTG+TGG | - | chr7_1:9755877-9755896 | Msa1008980:CDS | 35.0% |
| TGTTGAATGGAGCTGAAAAT+TGG | - | chr7_1:9755945-9755964 | Msa1008980:CDS | 35.0% | |
| AGCACCAATTGCTTTAACAT+CGG | + | chr7_1:9756002-9756021 | None:intergenic | 35.0% | |
| TCTGATTGTAGAAATGGTGA+TGG | - | chr7_1:9756124-9756143 | Msa1008980:CDS | 35.0% | |
| GGTAGTTCTTCTTGTGAAGA+TGG | + | chr7_1:9754885-9754904 | None:intergenic | 40.0% | |
| !! | AAGAAATGTGAGGTTTGGTG+TGG | + | chr7_1:9754993-9755012 | None:intergenic | 40.0% |
| CAAATGAGATGACCCAAAAG+AGG | + | chr7_1:9755074-9755093 | None:intergenic | 40.0% | |
| !! | CTCTTTTGGGTCATCTCATT+TGG | - | chr7_1:9755072-9755091 | Msa1008980:CDS | 40.0% |
| ATCAGCATGAGATTCAGCTA+TGG | + | chr7_1:9755156-9755175 | None:intergenic | 40.0% | |
| ! | AGTGATTGGTTAAAGCAAGG+TGG | - | chr7_1:9755509-9755528 | Msa1008980:CDS | 40.0% |
| TTCGGAGATCGAAAAGCTTA+AGG | - | chr7_1:9755610-9755629 | Msa1008980:CDS | 40.0% | |
| !! | TGGCTTTGAATATCGATTGC+CGG | - | chr7_1:9755768-9755787 | Msa1008980:CDS | 40.0% |
| !! | TGAAGTGTTGAGTGAAGCTT+TGG | - | chr7_1:9755904-9755923 | Msa1008980:CDS | 40.0% |
| !! | GAGCTGAAAATTGGTCTTCA+TGG | - | chr7_1:9755954-9755973 | Msa1008980:CDS | 40.0% |
| TGGTCTTCATGGTTACTTGA+AGG | - | chr7_1:9755965-9755984 | Msa1008980:CDS | 40.0% | |
| !! | TGCTGGTTCACCTAAATTTG+AGG | - | chr7_1:9756021-9756040 | Msa1008980:CDS | 40.0% |
| !! | AATGGTGATGGTGTTGAGAT+AGG | - | chr7_1:9756136-9756155 | Msa1008980:CDS | 40.0% |
| TTTGCTTCGCTCTTTGTCAA+AGG | - | chr7_1:9756190-9756209 | Msa1008980:CDS | 40.0% | |
| GGTAGTTCTTCTTGTGAAGA+TGG | + | chr7_1:9754885-9754904 | None:intergenic | 40.0% | |
| !! | AAGAAATGTGAGGTTTGGTG+TGG | + | chr7_1:9754993-9755012 | None:intergenic | 40.0% |
| CAAATGAGATGACCCAAAAG+AGG | + | chr7_1:9755074-9755093 | None:intergenic | 40.0% | |
| !! | CTCTTTTGGGTCATCTCATT+TGG | - | chr7_1:9755072-9755091 | Msa1008980:CDS | 40.0% |
| ATCAGCATGAGATTCAGCTA+TGG | + | chr7_1:9755156-9755175 | None:intergenic | 40.0% | |
| ! | AGTGATTGGTTAAAGCAAGG+TGG | - | chr7_1:9755509-9755528 | Msa1008980:CDS | 40.0% |
| TTCGGAGATCGAAAAGCTTA+AGG | - | chr7_1:9755610-9755629 | Msa1008980:CDS | 40.0% | |
| !! | TGGCTTTGAATATCGATTGC+CGG | - | chr7_1:9755768-9755787 | Msa1008980:CDS | 40.0% |
| !! | TGAAGTGTTGAGTGAAGCTT+TGG | - | chr7_1:9755904-9755923 | Msa1008980:CDS | 40.0% |
| !! | GAGCTGAAAATTGGTCTTCA+TGG | - | chr7_1:9755954-9755973 | Msa1008980:CDS | 40.0% |
| TGGTCTTCATGGTTACTTGA+AGG | - | chr7_1:9755965-9755984 | Msa1008980:CDS | 40.0% | |
| !! | TGCTGGTTCACCTAAATTTG+AGG | - | chr7_1:9756021-9756040 | Msa1008980:CDS | 40.0% |
| !! | AATGGTGATGGTGTTGAGAT+AGG | - | chr7_1:9756136-9756155 | Msa1008980:CDS | 40.0% |
| TTTGCTTCGCTCTTTGTCAA+AGG | - | chr7_1:9756190-9756209 | Msa1008980:CDS | 40.0% | |
| AGAGGAAGTGAGGTTTCTGA+AGG | + | chr7_1:9754906-9754925 | None:intergenic | 45.0% | |
| TCGGCTGATCTAAACGATTC+CGG | + | chr7_1:9755790-9755809 | None:intergenic | 45.0% | |
| !! | GTTAAAGCAATTGGTGCTGC+TGG | - | chr7_1:9756004-9756023 | Msa1008980:CDS | 45.0% |
| AGAGGAAGTGAGGTTTCTGA+AGG | + | chr7_1:9754906-9754925 | None:intergenic | 45.0% | |
| TCGGCTGATCTAAACGATTC+CGG | + | chr7_1:9755790-9755809 | None:intergenic | 45.0% | |
| !! | GTTAAAGCAATTGGTGCTGC+TGG | - | chr7_1:9756004-9756023 | Msa1008980:CDS | 45.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 9754849 | 9756225 | 9754849 | ID=Msa1008980;Name=Msa1008980 |
| chr7_1 | mRNA | 9754849 | 9756225 | 9754849 | ID=Msa1008980-mRNA-1;Parent=Msa1008980;Name=Msa1008980-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|458 |
| chr7_1 | exon | 9754849 | 9756225 | 9754849 | ID=Msa1008980-mRNA-1:exon:2739;Parent=Msa1008980-mRNA-1 |
| chr7_1 | CDS | 9754849 | 9756225 | 9754849 | ID=Msa1008980-mRNA-1:cds;Parent=Msa1008980-mRNA-1 |
| Gene Sequence |
| Protein sequence |
