Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1138670 | AES77692.2 | 91.485 | 458 | 39 | 0 | 1 | 458 | 1 | 458 | 0.0 | 871 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1138670 | sp|Q9LRQ8|PMAT2_ARATH | 39.407 | 472 | 244 | 13 | 4 | 458 | 5 | 451 | 1.69e-97 | 303 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1138670 | G7L664 | 91.485 | 458 | 39 | 0 | 1 | 458 | 1 | 458 | 0.0 | 871 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0738340 | Msa1138670 | 0.803995 | 2.670566e-49 | -8.615850e-47 |
| Msa1008980 | Msa1138670 | 0.822832 | 1.918256e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1138670 | MtrunA17_Chr7g0219331 | 91.485 | 458 | 39 | 0 | 1 | 458 | 96 | 553 | 0.0 | 869 |
| Msa1138670 | MtrunA17_Chr7g0219331 | 91.803 | 61 | 5 | 0 | 1 | 61 | 1 | 61 | 5.08e-29 | 119 |
| Msa1138670 | MtrunA17_Chr7g0219301 | 91.028 | 457 | 41 | 0 | 2 | 458 | 4 | 460 | 0.0 | 862 |
| Msa1138670 | MtrunA17_Chr7g0219301 | 87.747 | 253 | 31 | 0 | 206 | 458 | 631 | 883 | 9.07e-156 | 464 |
| Msa1138670 | MtrunA17_Chr7g0219301 | 89.899 | 99 | 10 | 0 | 16 | 114 | 527 | 625 | 2.40e-52 | 189 |
| Msa1138670 | MtrunA17_Chr6g0455341 | 47.639 | 466 | 224 | 9 | 2 | 458 | 8 | 462 | 1.51e-149 | 434 |
| Msa1138670 | MtrunA17_Chr6g0455361 | 47.414 | 464 | 223 | 10 | 3 | 458 | 9 | 459 | 2.15e-146 | 426 |
| Msa1138670 | MtrunA17_Chr7g0219351 | 86.239 | 218 | 30 | 0 | 71 | 288 | 14 | 231 | 2.20e-137 | 394 |
| Msa1138670 | MtrunA17_Chr6g0454761 | 46.220 | 463 | 227 | 11 | 3 | 458 | 9 | 456 | 1.07e-132 | 405 |
| Msa1138670 | MtrunA17_Chr6g0454761 | 45.553 | 461 | 234 | 9 | 3 | 458 | 496 | 944 | 7.12e-131 | 401 |
| Msa1138670 | MtrunA17_Chr6g0455351 | 43.255 | 467 | 206 | 12 | 3 | 458 | 9 | 427 | 1.05e-122 | 364 |
| Msa1138670 | MtrunA17_Chr7g0219181 | 41.474 | 475 | 253 | 11 | 3 | 458 | 9 | 477 | 1.82e-112 | 339 |
| Msa1138670 | MtrunA17_Chr7g0219291 | 40.598 | 468 | 259 | 11 | 3 | 458 | 357 | 817 | 3.35e-105 | 331 |
| Msa1138670 | MtrunA17_Chr7g0219291 | 37.193 | 285 | 165 | 10 | 167 | 442 | 35 | 314 | 1.64e-39 | 152 |
| Msa1138670 | MtrunA17_Chr7g0219241 | 40.421 | 475 | 251 | 15 | 3 | 456 | 10 | 473 | 5.95e-105 | 320 |
| Msa1138670 | MtrunA17_Chr7g0219121 | 39.293 | 481 | 253 | 14 | 3 | 456 | 9 | 477 | 1.64e-100 | 309 |
| Msa1138670 | MtrunA17_Chr7g0219341 | 90.132 | 152 | 15 | 0 | 307 | 458 | 1 | 152 | 3.45e-98 | 291 |
| Msa1138670 | MtrunA17_Chr7g0219311 | 83.673 | 147 | 24 | 0 | 295 | 441 | 1 | 147 | 1.87e-85 | 258 |
| Msa1138670 | MtrunA17_Chr2g0323511 | 36.765 | 476 | 261 | 13 | 3 | 452 | 17 | 478 | 6.08e-85 | 269 |
| Msa1138670 | MtrunA17_Chr3g0087901 | 34.395 | 471 | 277 | 13 | 3 | 456 | 9 | 464 | 4.63e-83 | 263 |
| Msa1138670 | MtrunA17_Chr7g0219881 | 34.947 | 475 | 260 | 11 | 3 | 452 | 6 | 456 | 3.09e-79 | 253 |
| Msa1138670 | MtrunA17_Chr8g0339641 | 34.382 | 477 | 282 | 12 | 3 | 456 | 4 | 472 | 2.69e-78 | 251 |
| Msa1138670 | MtrunA17_Chr2g0323471 | 36.364 | 451 | 249 | 15 | 22 | 452 | 41 | 473 | 6.92e-78 | 250 |
| Msa1138670 | MtrunA17_Chr3g0124341 | 35.625 | 480 | 266 | 13 | 3 | 456 | 10 | 472 | 3.56e-76 | 246 |
| Msa1138670 | MtrunA17_Chr2g0323481 | 34.521 | 449 | 241 | 14 | 39 | 458 | 39 | 463 | 5.50e-71 | 232 |
| Msa1138670 | MtrunA17_Chr3g0083761 | 32.068 | 474 | 276 | 12 | 3 | 452 | 6 | 457 | 5.95e-71 | 232 |
| Msa1138670 | MtrunA17_Chr2g0323421 | 33.747 | 483 | 266 | 16 | 3 | 458 | 56 | 511 | 4.32e-70 | 231 |
| Msa1138670 | MtrunA17_Chr2g0323501 | 32.967 | 455 | 269 | 13 | 26 | 458 | 37 | 477 | 3.81e-68 | 225 |
| Msa1138670 | MtrunA17_Chr7g0219101 | 32.533 | 458 | 226 | 15 | 27 | 457 | 30 | 431 | 4.90e-67 | 221 |
| Msa1138670 | MtrunA17_Chr7g0219211 | 42.086 | 278 | 140 | 7 | 3 | 267 | 10 | 279 | 4.49e-65 | 213 |
| Msa1138670 | MtrunA17_Chr7g0219191 | 45.771 | 201 | 103 | 4 | 22 | 219 | 15 | 212 | 4.44e-53 | 177 |
| Msa1138670 | MtrunA17_Chr6g0454741 | 46.667 | 165 | 82 | 3 | 76 | 239 | 25 | 184 | 1.86e-46 | 160 |
| Msa1138670 | MtrunA17_Chr6g0454741 | 62.745 | 51 | 19 | 0 | 383 | 433 | 185 | 235 | 4.35e-13 | 68.9 |
| Msa1138670 | MtrunA17_Chr3g0092011 | 37.591 | 274 | 143 | 8 | 3 | 262 | 4 | 263 | 5.38e-45 | 158 |
| Msa1138670 | MtrunA17_Chr7g0219251 | 46.154 | 169 | 85 | 2 | 3 | 168 | 8 | 173 | 1.47e-41 | 145 |
| Msa1138670 | MtrunA17_Chr2g0323441 | 44.633 | 177 | 87 | 5 | 1 | 168 | 1 | 175 | 7.33e-37 | 133 |
| Msa1138670 | MtrunA17_Chr7g0219201 | 38.798 | 183 | 107 | 3 | 280 | 457 | 21 | 203 | 1.57e-28 | 111 |
| Msa1138670 | MtrunA17_Chr7g0219221 | 37.107 | 159 | 97 | 3 | 300 | 456 | 1 | 158 | 7.35e-28 | 108 |
| Msa1138670 | MtrunA17_Chr3g0087221 | 25.926 | 432 | 249 | 19 | 11 | 413 | 14 | 403 | 6.06e-20 | 92.0 |
| Msa1138670 | MtrunA17_Chr3g0125001 | 26.995 | 426 | 224 | 18 | 20 | 413 | 18 | 388 | 1.00e-19 | 91.3 |
| Msa1138670 | MtrunA17_Chr4g0053091 | 24.939 | 413 | 230 | 17 | 26 | 413 | 31 | 388 | 1.17e-19 | 90.9 |
| Msa1138670 | MtrunA17_Chr8g0371821 | 25.191 | 393 | 221 | 17 | 42 | 409 | 39 | 383 | 2.14e-19 | 90.1 |
| Msa1138670 | MtrunA17_Chr8g0359251 | 28.097 | 452 | 226 | 21 | 23 | 437 | 26 | 415 | 2.56e-19 | 90.1 |
| Msa1138670 | MtrunA17_Chr4g0010381 | 26.190 | 420 | 242 | 15 | 20 | 413 | 18 | 395 | 3.28e-19 | 89.7 |
| Msa1138670 | MtrunA17_Chr2g0334001 | 23.218 | 435 | 266 | 16 | 42 | 452 | 39 | 429 | 9.57e-19 | 88.2 |
| Msa1138670 | MtrunA17_Chr4g0053111 | 26.603 | 421 | 252 | 19 | 26 | 427 | 27 | 409 | 3.38e-18 | 86.7 |
| Msa1138670 | MtrunA17_Chr3g0134041 | 24.510 | 408 | 249 | 13 | 26 | 412 | 30 | 399 | 5.69e-18 | 85.9 |
| Msa1138670 | MtrunA17_Chr7g0253501 | 25.571 | 438 | 286 | 14 | 43 | 456 | 36 | 457 | 7.93e-18 | 85.5 |
| Msa1138670 | MtrunA17_Chr3g0087401 | 25.682 | 440 | 256 | 17 | 32 | 433 | 21 | 427 | 2.45e-17 | 84.0 |
| Msa1138670 | MtrunA17_Chr4g0053081 | 23.971 | 413 | 244 | 17 | 26 | 413 | 32 | 399 | 3.72e-17 | 83.6 |
| Msa1138670 | MtrunA17_Chr4g0010361 | 27.818 | 417 | 241 | 17 | 20 | 413 | 18 | 397 | 1.41e-16 | 81.6 |
| Msa1138670 | MtrunA17_Chr4g0053061 | 25.917 | 409 | 259 | 16 | 20 | 413 | 51 | 430 | 7.46e-16 | 79.7 |
| Msa1138670 | MtrunA17_Chr8g0374911 | 26.108 | 406 | 254 | 17 | 24 | 413 | 48 | 423 | 1.31e-15 | 79.0 |
| Msa1138670 | MtrunA17_Chr3g0134071 | 26.753 | 385 | 229 | 15 | 48 | 412 | 56 | 407 | 1.96e-15 | 78.6 |
| Msa1138670 | MtrunA17_Chr8g0386141 | 25.070 | 355 | 230 | 11 | 62 | 410 | 59 | 383 | 3.88e-15 | 77.4 |
| Msa1138670 | MtrunA17_Chr3g0132001 | 23.691 | 401 | 264 | 12 | 62 | 453 | 66 | 433 | 5.84e-15 | 76.6 |
| Msa1138670 | MtrunA17_Chr7g0253531 | 24.925 | 333 | 217 | 7 | 43 | 362 | 36 | 348 | 1.10e-14 | 75.9 |
| Msa1138670 | MtrunA17_Chr7g0253541 | 24.689 | 482 | 304 | 17 | 4 | 456 | 6 | 457 | 7.34e-14 | 73.6 |
| Msa1138670 | MtrunA17_Chr4g0010311 | 24.286 | 420 | 251 | 15 | 20 | 413 | 18 | 396 | 1.64e-13 | 72.4 |
| Msa1138670 | MtrunA17_Chr4g0010331 | 24.510 | 408 | 259 | 13 | 20 | 413 | 18 | 390 | 2.40e-13 | 71.6 |
| Msa1138670 | MtrunA17_Chr4g0010351 | 28.045 | 353 | 188 | 17 | 20 | 348 | 18 | 328 | 7.17e-13 | 70.1 |
| Msa1138670 | MtrunA17_Chr4g0072041 | 23.377 | 462 | 291 | 18 | 24 | 456 | 33 | 460 | 8.48e-13 | 70.1 |
| Msa1138670 | MtrunA17_Chr4g0010121 | 23.844 | 411 | 259 | 13 | 20 | 413 | 63 | 436 | 9.29e-12 | 67.0 |
| Msa1138670 | MtrunA17_Chr3g0092001 | 35.345 | 116 | 70 | 3 | 344 | 458 | 8 | 119 | 9.65e-12 | 62.0 |
| Msa1138670 | MtrunA17_Chr3g0134061 | 24.356 | 427 | 252 | 17 | 20 | 412 | 22 | 411 | 3.74e-11 | 65.1 |
| Msa1138670 | MtrunA17_Chr5g0408911 | 23.765 | 425 | 266 | 17 | 26 | 433 | 41 | 424 | 3.76e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1138670 | AT3G29670.1 | 39.407 | 472 | 244 | 13 | 4 | 458 | 5 | 451 | 1.72e-98 | 303 |
| Msa1138670 | AT5G39090.1 | 38.229 | 463 | 252 | 11 | 5 | 456 | 8 | 447 | 8.29e-96 | 296 |
| Msa1138670 | AT5G39080.1 | 38.065 | 465 | 258 | 12 | 4 | 452 | 7 | 457 | 1.43e-95 | 296 |
| Msa1138670 | AT5G39050.1 | 38.771 | 472 | 256 | 13 | 3 | 456 | 11 | 467 | 2.77e-95 | 295 |
| Msa1138670 | AT3G29635.1 | 40.340 | 471 | 244 | 14 | 3 | 456 | 4 | 454 | 4.75e-95 | 294 |
| Msa1138670 | AT5G61160.1 | 37.263 | 475 | 253 | 14 | 3 | 458 | 4 | 452 | 1.04e-90 | 283 |
| Msa1138670 | AT3G29680.1 | 40.498 | 442 | 229 | 13 | 24 | 452 | 23 | 443 | 1.00e-88 | 278 |
| Msa1138670 | AT3G29590.1 | 37.740 | 469 | 246 | 15 | 4 | 456 | 10 | 448 | 1.93e-87 | 275 |
| Msa1138670 | AT1G03940.1 | 33.958 | 480 | 267 | 17 | 3 | 456 | 9 | 464 | 1.65e-77 | 249 |
| Msa1138670 | AT1G03495.1 | 35.465 | 344 | 188 | 12 | 4 | 331 | 10 | 335 | 2.84e-55 | 187 |
| Msa1138670 | AT3G29720.1 | 38.647 | 207 | 107 | 5 | 99 | 299 | 26 | 218 | 3.88e-32 | 122 |
| Msa1138670 | AT2G19070.1 | 22.727 | 440 | 293 | 11 | 39 | 456 | 37 | 451 | 2.71e-21 | 96.7 |
| Msa1138670 | AT5G23940.1 | 25.618 | 445 | 255 | 16 | 26 | 436 | 25 | 427 | 1.69e-20 | 94.4 |
| Msa1138670 | AT3G29690.1 | 34.868 | 152 | 79 | 6 | 312 | 455 | 38 | 177 | 3.44e-16 | 77.0 |
| Msa1138670 | AT5G48930.1 | 22.824 | 425 | 273 | 16 | 42 | 448 | 39 | 426 | 1.55e-15 | 79.0 |
| Msa1138670 | AT3G47170.1 | 25.177 | 282 | 175 | 9 | 62 | 328 | 70 | 330 | 2.55e-15 | 78.6 |
| Msa1138670 | AT5G67160.1 | 23.133 | 415 | 259 | 10 | 10 | 409 | 13 | 382 | 5.91e-15 | 77.0 |
| Msa1138670 | AT5G42830.1 | 24.205 | 409 | 260 | 14 | 18 | 408 | 20 | 396 | 3.43e-14 | 74.7 |
| Msa1138670 | AT2G39980.1 | 24.433 | 397 | 237 | 16 | 58 | 413 | 58 | 432 | 4.44e-14 | 74.7 |
| Msa1138670 | AT1G31490.1 | 23.888 | 427 | 259 | 16 | 5 | 409 | 1 | 383 | 6.33e-14 | 73.9 |
| Msa1138670 | AT5G07850.1 | 24.324 | 407 | 257 | 12 | 26 | 413 | 31 | 405 | 7.68e-14 | 73.9 |
| Msa1138670 | AT5G38130.1 | 26.024 | 415 | 249 | 18 | 29 | 425 | 52 | 426 | 7.20e-13 | 70.9 |
| Msa1138670 | AT5G41040.2 | 23.546 | 361 | 228 | 14 | 62 | 409 | 69 | 394 | 9.48e-13 | 70.5 |
| Msa1138670 | AT5G41040.1 | 23.546 | 361 | 228 | 14 | 62 | 409 | 85 | 410 | 1.20e-12 | 70.1 |
| Msa1138670 | AT1G24430.1 | 22.273 | 440 | 275 | 13 | 26 | 450 | 29 | 416 | 1.77e-12 | 69.3 |
| Msa1138670 | AT1G28680.2 | 23.611 | 288 | 184 | 6 | 62 | 342 | 62 | 320 | 2.01e-12 | 68.9 |
| Msa1138670 | AT1G28680.1 | 23.611 | 288 | 184 | 6 | 62 | 342 | 62 | 320 | 2.08e-12 | 69.3 |
| Msa1138670 | AT5G07860.1 | 24.317 | 366 | 233 | 13 | 54 | 408 | 64 | 396 | 1.14e-11 | 67.0 |
| Msa1138670 | AT1G03390.1 | 22.111 | 398 | 262 | 13 | 42 | 425 | 59 | 422 | 1.21e-11 | 67.0 |
| Msa1138670 | AT4G31910.1 | 22.478 | 347 | 225 | 11 | 42 | 368 | 46 | 368 | 1.49e-11 | 66.6 |
| Msa1138670 | AT3G48720.1 | 22.222 | 378 | 253 | 13 | 39 | 409 | 41 | 384 | 3.40e-11 | 65.5 |
Find 77 sgRNAs with CRISPR-Local
Find 184 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGATTCCTACAACATATTT+TGG | 0.090584 | 7_4:+8369470 | Msa1138670:CDS |
| TTTGAAACAAGTGAATTATT+TGG | 0.202070 | 7_4:+8369521 | Msa1138670:CDS |
| AGTGAATTATTTGGAGAAAA+TGG | 0.206523 | 7_4:+8369530 | Msa1138670:CDS |
| GCTGATTTCAATCATTTATC+TGG | 0.253026 | 7_4:+8368834 | Msa1138670:CDS |
| GGAAAGTGATTGTTTGAGTT+TGG | 0.268451 | 7_4:-8368691 | None:intergenic |
| GAAACCATTTCAACTTTCTT+TGG | 0.269632 | 7_4:-8369737 | None:intergenic |
| GTGCTATAAACCTCAAATTT+AGG | 0.277190 | 7_4:-8369695 | None:intergenic |
| TTACTTTCTTTGACATACTA+TGG | 0.279036 | 7_4:+8368589 | Msa1138670:CDS |
| ACATGATCAAGCTTCTGTTT+TGG | 0.289012 | 7_4:+8368914 | Msa1138670:CDS |
| CCAATTGAAAATCCATAGTT+TGG | 0.297340 | 7_4:-8368957 | None:intergenic |
| AACCAACAATAGAAGCTTAA+TGG | 0.299594 | 7_4:+8369196 | Msa1138670:CDS |
| AGGCAAAATATTTGAGTGAT+TGG | 0.316985 | 7_4:+8369159 | Msa1138670:CDS |
| CCCTTGATGAATTTGATGAT+TGG | 0.320166 | 7_4:-8368777 | None:intergenic |
| GTTCCAAATGATTCATTTAG+AGG | 0.320989 | 7_4:+8369233 | Msa1138670:CDS |
| ACAATAGAAGCTTAATGGTT+TGG | 0.327026 | 7_4:+8369201 | Msa1138670:CDS |
| AACCATTAAGCTTCTATTGT+TGG | 0.335300 | 7_4:-8369198 | None:intergenic |
| CAATAGAAGCTTAATGGTTT+GGG | 0.346870 | 7_4:+8369202 | Msa1138670:CDS |
| TGTCTTTCTGATTGTAGAAA+TGG | 0.347109 | 7_4:+8369782 | Msa1138670:CDS |
| GAGGTTTATAGCACTGATTT+TGG | 0.354064 | 7_4:+8369704 | Msa1138670:CDS |
| CCAAAATATGTTGTAGGAAT+CGG | 0.355820 | 7_4:-8369470 | None:intergenic |
| GAGCTGAAAATTGGTCTTCA+TGG | 0.367514 | 7_4:+8369618 | Msa1138670:CDS |
| ATTGGTTTGTGAGAATCATT+AGG | 0.380290 | 7_4:-8368759 | None:intergenic |
| TGCTGGTTCACCTAAATTTG+AGG | 0.384622 | 7_4:+8369685 | Msa1138670:CDS |
| CAATTTCCAAAATATGTTGT+AGG | 0.386192 | 7_4:-8369476 | None:intergenic |
| CAAGGATCCAAATGAATTAG+AGG | 0.386216 | 7_4:+8369139 | Msa1138670:CDS |
| TCTTCACTTGTCAACATTTG+TGG | 0.387843 | 7_4:+8369343 | Msa1138670:CDS |
| AACCCTCTAAATGAATCATT+TGG | 0.391425 | 7_4:-8369236 | None:intergenic |
| TCATGTGAAATATTCAAGTT+AGG | 0.394263 | 7_4:-8368897 | None:intergenic |
| ATTACCGATGTTAAAGCAAT+TGG | 0.395582 | 7_4:+8369659 | Msa1138670:CDS |
| ATTGTTTGAGTTTGGGAAGA+AGG | 0.398368 | 7_4:-8368683 | None:intergenic |
| TAGAAGAAAATTCTTTGAAC+AGG | 0.399183 | 7_4:-8368624 | None:intergenic |
| GTTATTTCAATTATCTCGTT+CGG | 0.405831 | 7_4:+8369256 | Msa1138670:CDS |
| ATTTGTAGTGTCAAAACAAA+AGG | 0.406667 | 7_4:+8369298 | Msa1138670:CDS |
| GAAAGTGATTGTTTGAGTTT+GGG | 0.409790 | 7_4:-8368690 | None:intergenic |
| TGAAGTGTTGAGTGAAGCTT+TGG | 0.427888 | 7_4:+8369568 | Msa1138670:CDS |
| TGGTCTTCATGGTTACTTGA+AGG | 0.428251 | 7_4:+8369629 | Msa1138670:CDS |
| TGGCTTTGAATATCGATTGC+CGG | 0.431534 | 7_4:+8369432 | Msa1138670:CDS |
| AAAACCAAAGAAAGTTGAAA+TGG | 0.434697 | 7_4:+8369733 | Msa1138670:CDS |
| TTCGGAGATCGAAAAGCTTA+AGG | 0.435179 | 7_4:+8369274 | Msa1138670:CDS |
| AATGGTGATGGTGTTGAGAT+AGG | 0.443549 | 7_4:+8369800 | Msa1138670:CDS |
| AGTATGTCAAAGAAAGTAAG+AGG | 0.444791 | 7_4:-8368585 | None:intergenic |
| AATTGCTTTAACATCGGTAA+TGG | 0.446233 | 7_4:-8369657 | None:intergenic |
| TGTTGAATGGAGCTGAAAAT+TGG | 0.446827 | 7_4:+8369609 | Msa1138670:CDS |
| TCGGCTGATCTAAACGATTC+CGG | 0.447477 | 7_4:-8369451 | None:intergenic |
| TTGTTTGAGTTTGGGAAGAA+GGG | 0.473939 | 7_4:-8368682 | None:intergenic |
| ATAAAGAATGGAGTGTTGAA+TGG | 0.475613 | 7_4:+8369596 | Msa1138670:CDS |
| ACCAATCATCAAATTCATCA+AGG | 0.476412 | 7_4:+8368776 | Msa1138670:CDS |
| AAATTCTTGTGGCAAACAAA+GGG | 0.476984 | 7_4:-8369090 | None:intergenic |
| ATGGTTTCTATAGATAGAAC+TGG | 0.490163 | 7_4:+8369752 | Msa1138670:CDS |
| TATTGAAGAAATGTGAGGTT+TGG | 0.494665 | 7_4:-8368659 | None:intergenic |
| TGTCAAAACAAAAGGGTACT+AGG | 0.501108 | 7_4:+8369306 | Msa1138670:CDS |
| AAGAAAATTCTTTGAACAGG+TGG | 0.502827 | 7_4:-8368621 | None:intergenic |
| TTTGCTTCGCTCTTTGTCAA+AGG | 0.503257 | 7_4:+8369854 | Msa1138670:CDS |
| AGAGGAAGTGAGGTTTCTGA+AGG | 0.503348 | 7_4:-8368567 | None:intergenic |
| GTTAAAGCAATTGGTGCTGC+TGG | 0.503742 | 7_4:+8369668 | Msa1138670:CDS |
| TTCCAAATGATTCATTTAGA+GGG | 0.515033 | 7_4:+8369234 | Msa1138670:CDS |
| AAAGAAAGTAAGAGGAAGTG+AGG | 0.516885 | 7_4:-8368577 | None:intergenic |
| GGTAGTTCTTCTTGTGAAGA+TGG | 0.518675 | 7_4:-8368546 | None:intergenic |
| CTATGATAGAAAAGTAATCA+AGG | 0.519078 | 7_4:+8369121 | Msa1138670:CDS |
| GGTATCTATTGCTTATGCAT+TGG | 0.520850 | 7_4:+8369364 | Msa1138670:CDS |
| AAAATTCTTGTGGCAAACAA+AGG | 0.522274 | 7_4:-8369091 | None:intergenic |
| TTGAGTGATTGGTTAAAGCA+AGG | 0.525666 | 7_4:+8369170 | Msa1138670:CDS |
| TGGAGAAAATGGACTAATTG+TGG | 0.526233 | 7_4:+8369541 | Msa1138670:CDS |
| GCTTTGGAAACTATAAAGAA+TGG | 0.532473 | 7_4:+8369584 | Msa1138670:CDS |
| TCTACAATCAGAAAGACAAA+AGG | 0.534606 | 7_4:-8369777 | None:intergenic |
| AGCACCAATTGCTTTAACAT+CGG | 0.552039 | 7_4:-8369663 | None:intergenic |
| TTTGTAGTGTCAAAACAAAA+GGG | 0.558518 | 7_4:+8369299 | Msa1138670:CDS |
| CAAATGAGATGACCTAAAAG+AGG | 0.571110 | 7_4:-8368735 | None:intergenic |
| CCAATCATCAAATTCATCAA+GGG | 0.585572 | 7_4:+8368777 | Msa1138670:CDS |
| TAGAAAGGACAAAATTCTTG+TGG | 0.597031 | 7_4:-8369101 | None:intergenic |
| TCTGATTGTAGAAATGGTGA+TGG | 0.615354 | 7_4:+8369788 | Msa1138670:CDS |
| AGTGATTGGTTAAAGCAAGG+TGG | 0.623091 | 7_4:+8369173 | Msa1138670:CDS |
| ATAAAAGTGAGAAAGTGCAA+TGG | 0.624999 | 7_4:-8368712 | None:intergenic |
| ATCAGCATGAGATTCAGCTA+TGG | 0.626225 | 7_4:-8368817 | None:intergenic |
| AAGAAATGTGAGGTTTGGTG+TGG | 0.632754 | 7_4:-8368654 | None:intergenic |
| AATTCTTGTGGCAAACAAAG+GGG | 0.665834 | 7_4:-8369089 | None:intergenic |
| AAGGGTATTGAAGAAATGTG+AGG | 0.671198 | 7_4:-8368664 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AACTTCTTTTATCAAATCTT+GGG | + | chr7_4:8369019-8369038 | Msa1138670:CDS | 20.0% |
| !!! | ATTACTTTTCTATCATAGAA+AGG | - | chr7_4:8369119-8369138 | None:intergenic | 20.0% |
| !!! | ACATATTTTGGAAATTGTAT+TGG | + | chr7_4:8369482-8369501 | Msa1138670:CDS | 20.0% |
| !!! | TTTGAAACAAGTGAATTATT+TGG | + | chr7_4:8369521-8369540 | Msa1138670:CDS | 20.0% |
| !!! | AACTTCTTTTATCAAATCTT+GGG | + | chr7_4:8369019-8369038 | Msa1138670:CDS | 20.0% |
| !!! | ATTACTTTTCTATCATAGAA+AGG | - | chr7_4:8369119-8369138 | None:intergenic | 20.0% |
| !!! | ACATATTTTGGAAATTGTAT+TGG | + | chr7_4:8369482-8369501 | Msa1138670:CDS | 20.0% |
| !!! | TTTGAAACAAGTGAATTATT+TGG | + | chr7_4:8369521-8369540 | Msa1138670:CDS | 20.0% |
| ! | TTACTTTCTTTGACATACTA+TGG | + | chr7_4:8368589-8368608 | Msa1138670:CDS | 25.0% |
| ! | TAGAAGAAAATTCTTTGAAC+AGG | - | chr7_4:8368627-8368646 | None:intergenic | 25.0% |
| !! | TCATGTGAAATATTCAAGTT+AGG | - | chr7_4:8368900-8368919 | None:intergenic | 25.0% |
| ! | AAATCCATAGTTTGGAAAAA+CGG | - | chr7_4:8368952-8368971 | None:intergenic | 25.0% |
| !! | CAACTTCTTTTATCAAATCT+TGG | + | chr7_4:8369018-8369037 | Msa1138670:CDS | 25.0% |
| ! | CTATGATAGAAAAGTAATCA+AGG | + | chr7_4:8369121-8369140 | Msa1138670:CDS | 25.0% |
| !! | TATTTTGCCTCTAATTCATT+TGG | - | chr7_4:8369149-8369168 | None:intergenic | 25.0% |
| ! | TTCCAAATGATTCATTTAGA+GGG | + | chr7_4:8369234-8369253 | Msa1138670:CDS | 25.0% |
| !! | GTTATTTCAATTATCTCGTT+CGG | + | chr7_4:8369256-8369275 | Msa1138670:CDS | 25.0% |
| ! | ATTTGTAGTGTCAAAACAAA+AGG | + | chr7_4:8369298-8369317 | Msa1138670:CDS | 25.0% |
| ! | TTTGTAGTGTCAAAACAAAA+GGG | + | chr7_4:8369299-8369318 | Msa1138670:CDS | 25.0% |
| ! | CAATTTCCAAAATATGTTGT+AGG | - | chr7_4:8369479-8369498 | None:intergenic | 25.0% |
| !!! | TATTTTGGAAATTGTATTGG+AGG | + | chr7_4:8369485-8369504 | Msa1138670:CDS | 25.0% |
| ! | AGTGAATTATTTGGAGAAAA+TGG | + | chr7_4:8369530-8369549 | Msa1138670:CDS | 25.0% |
| ! | AAAACCAAAGAAAGTTGAAA+TGG | + | chr7_4:8369733-8369752 | Msa1138670:CDS | 25.0% |
| ! | TTACTTTCTTTGACATACTA+TGG | + | chr7_4:8368589-8368608 | Msa1138670:CDS | 25.0% |
| ! | TAGAAGAAAATTCTTTGAAC+AGG | - | chr7_4:8368627-8368646 | None:intergenic | 25.0% |
| !! | TCATGTGAAATATTCAAGTT+AGG | - | chr7_4:8368900-8368919 | None:intergenic | 25.0% |
| ! | AAATCCATAGTTTGGAAAAA+CGG | - | chr7_4:8368952-8368971 | None:intergenic | 25.0% |
| !! | CAACTTCTTTTATCAAATCT+TGG | + | chr7_4:8369018-8369037 | Msa1138670:CDS | 25.0% |
| ! | CTATGATAGAAAAGTAATCA+AGG | + | chr7_4:8369121-8369140 | Msa1138670:CDS | 25.0% |
| !! | TATTTTGCCTCTAATTCATT+TGG | - | chr7_4:8369149-8369168 | None:intergenic | 25.0% |
| ! | TTCCAAATGATTCATTTAGA+GGG | + | chr7_4:8369234-8369253 | Msa1138670:CDS | 25.0% |
| !! | GTTATTTCAATTATCTCGTT+CGG | + | chr7_4:8369256-8369275 | Msa1138670:CDS | 25.0% |
| ! | ATTTGTAGTGTCAAAACAAA+AGG | + | chr7_4:8369298-8369317 | Msa1138670:CDS | 25.0% |
| ! | TTTGTAGTGTCAAAACAAAA+GGG | + | chr7_4:8369299-8369318 | Msa1138670:CDS | 25.0% |
| ! | CAATTTCCAAAATATGTTGT+AGG | - | chr7_4:8369479-8369498 | None:intergenic | 25.0% |
| !!! | TATTTTGGAAATTGTATTGG+AGG | + | chr7_4:8369485-8369504 | Msa1138670:CDS | 25.0% |
| ! | AGTGAATTATTTGGAGAAAA+TGG | + | chr7_4:8369530-8369549 | Msa1138670:CDS | 25.0% |
| ! | AAAACCAAAGAAAGTTGAAA+TGG | + | chr7_4:8369733-8369752 | Msa1138670:CDS | 25.0% |
| AGTATGTCAAAGAAAGTAAG+AGG | - | chr7_4:8368588-8368607 | None:intergenic | 30.0% | |
| AAGAAAATTCTTTGAACAGG+TGG | - | chr7_4:8368624-8368643 | None:intergenic | 30.0% | |
| TATTGAAGAAATGTGAGGTT+TGG | - | chr7_4:8368662-8368681 | None:intergenic | 30.0% | |
| ! | GAAAGTGATTGTTTGAGTTT+GGG | - | chr7_4:8368693-8368712 | None:intergenic | 30.0% |
| ! | ATAAAAGTGAGAAAGTGCAA+TGG | - | chr7_4:8368715-8368734 | None:intergenic | 30.0% |
| !! | TCTCACTTTTATCCTCTTTT+AGG | + | chr7_4:8368723-8368742 | Msa1138670:CDS | 30.0% |
| !! | ATTGGTTTGTGAGAATCATT+AGG | - | chr7_4:8368762-8368781 | None:intergenic | 30.0% |
| ACCAATCATCAAATTCATCA+AGG | + | chr7_4:8368776-8368795 | Msa1138670:CDS | 30.0% | |
| CCAATCATCAAATTCATCAA+GGG | + | chr7_4:8368777-8368796 | Msa1138670:CDS | 30.0% | |
| ! | GCTGATTTCAATCATTTATC+TGG | + | chr7_4:8368834-8368853 | Msa1138670:CDS | 30.0% |
| CCAATTGAAAATCCATAGTT+TGG | - | chr7_4:8368960-8368979 | None:intergenic | 30.0% | |
| ! | CCAAACTATGGATTTTCAAT+TGG | + | chr7_4:8368957-8368976 | Msa1138670:CDS | 30.0% |
| AAATTCTTGTGGCAAACAAA+GGG | - | chr7_4:8369093-8369112 | None:intergenic | 30.0% | |
| AAAATTCTTGTGGCAAACAA+AGG | - | chr7_4:8369094-8369113 | None:intergenic | 30.0% | |
| TAGAAAGGACAAAATTCTTG+TGG | - | chr7_4:8369104-8369123 | None:intergenic | 30.0% | |
| AGGCAAAATATTTGAGTGAT+TGG | + | chr7_4:8369159-8369178 | Msa1138670:CDS | 30.0% | |
| AACCAACAATAGAAGCTTAA+TGG | + | chr7_4:8369196-8369215 | Msa1138670:CDS | 30.0% | |
| AACCATTAAGCTTCTATTGT+TGG | - | chr7_4:8369201-8369220 | None:intergenic | 30.0% | |
| ACAATAGAAGCTTAATGGTT+TGG | + | chr7_4:8369201-8369220 | Msa1138670:CDS | 30.0% | |
| CAATAGAAGCTTAATGGTTT+GGG | + | chr7_4:8369202-8369221 | Msa1138670:CDS | 30.0% | |
| GTTCCAAATGATTCATTTAG+AGG | + | chr7_4:8369233-8369252 | Msa1138670:CDS | 30.0% | |
| AACCCTCTAAATGAATCATT+TGG | - | chr7_4:8369239-8369258 | None:intergenic | 30.0% | |
| TGAGAACAAAAATGTTGTGA+TGG | + | chr7_4:8369412-8369431 | Msa1138670:CDS | 30.0% | |
| CCAAAATATGTTGTAGGAAT+CGG | - | chr7_4:8369473-8369492 | None:intergenic | 30.0% | |
| !! | GCTTTGGAAACTATAAAGAA+TGG | + | chr7_4:8369584-8369603 | Msa1138670:CDS | 30.0% |
| !! | ATAAAGAATGGAGTGTTGAA+TGG | + | chr7_4:8369596-8369615 | Msa1138670:CDS | 30.0% |
| AATTGCTTTAACATCGGTAA+TGG | - | chr7_4:8369660-8369679 | None:intergenic | 30.0% | |
| ATTACCGATGTTAAAGCAAT+TGG | + | chr7_4:8369659-8369678 | Msa1138670:CDS | 30.0% | |
| GTGCTATAAACCTCAAATTT+AGG | - | chr7_4:8369698-8369717 | None:intergenic | 30.0% | |
| GAAACCATTTCAACTTTCTT+TGG | - | chr7_4:8369740-8369759 | None:intergenic | 30.0% | |
| ATGGTTTCTATAGATAGAAC+TGG | + | chr7_4:8369752-8369771 | Msa1138670:CDS | 30.0% | |
| TCTACAATCAGAAAGACAAA+AGG | - | chr7_4:8369780-8369799 | None:intergenic | 30.0% | |
| TGTCTTTCTGATTGTAGAAA+TGG | + | chr7_4:8369782-8369801 | Msa1138670:CDS | 30.0% | |
| TGTGTCTAACAAAAAAGCAA+TGG | + | chr7_4:8369826-8369845 | Msa1138670:CDS | 30.0% | |
| AGTATGTCAAAGAAAGTAAG+AGG | - | chr7_4:8368588-8368607 | None:intergenic | 30.0% | |
| AAGAAAATTCTTTGAACAGG+TGG | - | chr7_4:8368624-8368643 | None:intergenic | 30.0% | |
| TATTGAAGAAATGTGAGGTT+TGG | - | chr7_4:8368662-8368681 | None:intergenic | 30.0% | |
| ! | GAAAGTGATTGTTTGAGTTT+GGG | - | chr7_4:8368693-8368712 | None:intergenic | 30.0% |
| ! | ATAAAAGTGAGAAAGTGCAA+TGG | - | chr7_4:8368715-8368734 | None:intergenic | 30.0% |
| !! | TCTCACTTTTATCCTCTTTT+AGG | + | chr7_4:8368723-8368742 | Msa1138670:CDS | 30.0% |
| !! | ATTGGTTTGTGAGAATCATT+AGG | - | chr7_4:8368762-8368781 | None:intergenic | 30.0% |
| ACCAATCATCAAATTCATCA+AGG | + | chr7_4:8368776-8368795 | Msa1138670:CDS | 30.0% | |
| CCAATCATCAAATTCATCAA+GGG | + | chr7_4:8368777-8368796 | Msa1138670:CDS | 30.0% | |
| ! | GCTGATTTCAATCATTTATC+TGG | + | chr7_4:8368834-8368853 | Msa1138670:CDS | 30.0% |
| CCAATTGAAAATCCATAGTT+TGG | - | chr7_4:8368960-8368979 | None:intergenic | 30.0% | |
| ! | CCAAACTATGGATTTTCAAT+TGG | + | chr7_4:8368957-8368976 | Msa1138670:CDS | 30.0% |
| AAATTCTTGTGGCAAACAAA+GGG | - | chr7_4:8369093-8369112 | None:intergenic | 30.0% | |
| AAAATTCTTGTGGCAAACAA+AGG | - | chr7_4:8369094-8369113 | None:intergenic | 30.0% | |
| TAGAAAGGACAAAATTCTTG+TGG | - | chr7_4:8369104-8369123 | None:intergenic | 30.0% | |
| AGGCAAAATATTTGAGTGAT+TGG | + | chr7_4:8369159-8369178 | Msa1138670:CDS | 30.0% | |
| AACCAACAATAGAAGCTTAA+TGG | + | chr7_4:8369196-8369215 | Msa1138670:CDS | 30.0% | |
| AACCATTAAGCTTCTATTGT+TGG | - | chr7_4:8369201-8369220 | None:intergenic | 30.0% | |
| ACAATAGAAGCTTAATGGTT+TGG | + | chr7_4:8369201-8369220 | Msa1138670:CDS | 30.0% | |
| CAATAGAAGCTTAATGGTTT+GGG | + | chr7_4:8369202-8369221 | Msa1138670:CDS | 30.0% | |
| GTTCCAAATGATTCATTTAG+AGG | + | chr7_4:8369233-8369252 | Msa1138670:CDS | 30.0% | |
| AACCCTCTAAATGAATCATT+TGG | - | chr7_4:8369239-8369258 | None:intergenic | 30.0% | |
| TGAGAACAAAAATGTTGTGA+TGG | + | chr7_4:8369412-8369431 | Msa1138670:CDS | 30.0% | |
| CCAAAATATGTTGTAGGAAT+CGG | - | chr7_4:8369473-8369492 | None:intergenic | 30.0% | |
| !! | GCTTTGGAAACTATAAAGAA+TGG | + | chr7_4:8369584-8369603 | Msa1138670:CDS | 30.0% |
| !! | ATAAAGAATGGAGTGTTGAA+TGG | + | chr7_4:8369596-8369615 | Msa1138670:CDS | 30.0% |
| AATTGCTTTAACATCGGTAA+TGG | - | chr7_4:8369660-8369679 | None:intergenic | 30.0% | |
| ATTACCGATGTTAAAGCAAT+TGG | + | chr7_4:8369659-8369678 | Msa1138670:CDS | 30.0% | |
| GTGCTATAAACCTCAAATTT+AGG | - | chr7_4:8369698-8369717 | None:intergenic | 30.0% | |
| GAAACCATTTCAACTTTCTT+TGG | - | chr7_4:8369740-8369759 | None:intergenic | 30.0% | |
| ATGGTTTCTATAGATAGAAC+TGG | + | chr7_4:8369752-8369771 | Msa1138670:CDS | 30.0% | |
| TCTACAATCAGAAAGACAAA+AGG | - | chr7_4:8369780-8369799 | None:intergenic | 30.0% | |
| TGTCTTTCTGATTGTAGAAA+TGG | + | chr7_4:8369782-8369801 | Msa1138670:CDS | 30.0% | |
| TGTGTCTAACAAAAAAGCAA+TGG | + | chr7_4:8369826-8369845 | Msa1138670:CDS | 30.0% | |
| AAAGAAAGTAAGAGGAAGTG+AGG | - | chr7_4:8368580-8368599 | None:intergenic | 35.0% | |
| !! | AAGGGTATTGAAGAAATGTG+AGG | - | chr7_4:8368667-8368686 | None:intergenic | 35.0% |
| ! | TTGTTTGAGTTTGGGAAGAA+GGG | - | chr7_4:8368685-8368704 | None:intergenic | 35.0% |
| ! | ATTGTTTGAGTTTGGGAAGA+AGG | - | chr7_4:8368686-8368705 | None:intergenic | 35.0% |
| ! | GGAAAGTGATTGTTTGAGTT+TGG | - | chr7_4:8368694-8368713 | None:intergenic | 35.0% |
| CAAATGAGATGACCTAAAAG+AGG | - | chr7_4:8368738-8368757 | None:intergenic | 35.0% | |
| !! | CTCTTTTAGGTCATCTCATT+TGG | + | chr7_4:8368736-8368755 | Msa1138670:CDS | 35.0% |
| ! | CCCTTGATGAATTTGATGAT+TGG | - | chr7_4:8368780-8368799 | None:intergenic | 35.0% |
| ! | ACATGATCAAGCTTCTGTTT+TGG | + | chr7_4:8368914-8368933 | Msa1138670:CDS | 35.0% |
| !! | GTTACCGTTTTTCCAAACTA+TGG | + | chr7_4:8368945-8368964 | Msa1138670:CDS | 35.0% |
| !!! | TCACATCATGCTGTTTTAGA+TGG | + | chr7_4:8368987-8369006 | Msa1138670:CDS | 35.0% |
| AATTCTTGTGGCAAACAAAG+GGG | - | chr7_4:8369092-8369111 | None:intergenic | 35.0% | |
| CAAGGATCCAAATGAATTAG+AGG | + | chr7_4:8369139-8369158 | Msa1138670:CDS | 35.0% | |
| ! | TTGAGTGATTGGTTAAAGCA+AGG | + | chr7_4:8369170-8369189 | Msa1138670:CDS | 35.0% |
| !! | TGTCAAAACAAAAGGGTACT+AGG | + | chr7_4:8369306-8369325 | Msa1138670:CDS | 35.0% |
| TCTTCACTTGTCAACATTTG+TGG | + | chr7_4:8369343-8369362 | Msa1138670:CDS | 35.0% | |
| GGTATCTATTGCTTATGCAT+TGG | + | chr7_4:8369364-8369383 | Msa1138670:CDS | 35.0% | |
| ! | CCGATTCCTACAACATATTT+TGG | + | chr7_4:8369470-8369489 | Msa1138670:CDS | 35.0% |
| !! | TGGAGAAAATGGACTAATTG+TGG | + | chr7_4:8369541-8369560 | Msa1138670:CDS | 35.0% |
| TGTTGAATGGAGCTGAAAAT+TGG | + | chr7_4:8369609-8369628 | Msa1138670:CDS | 35.0% | |
| AGCACCAATTGCTTTAACAT+CGG | - | chr7_4:8369666-8369685 | None:intergenic | 35.0% | |
| !!! | GAGGTTTATAGCACTGATTT+TGG | + | chr7_4:8369704-8369723 | Msa1138670:CDS | 35.0% |
| !!! | TATAGCACTGATTTTGGTTG+TGG | + | chr7_4:8369710-8369729 | Msa1138670:CDS | 35.0% |
| TCTGATTGTAGAAATGGTGA+TGG | + | chr7_4:8369788-8369807 | Msa1138670:CDS | 35.0% | |
| AAAGAAAGTAAGAGGAAGTG+AGG | - | chr7_4:8368580-8368599 | None:intergenic | 35.0% | |
| !! | AAGGGTATTGAAGAAATGTG+AGG | - | chr7_4:8368667-8368686 | None:intergenic | 35.0% |
| ! | TTGTTTGAGTTTGGGAAGAA+GGG | - | chr7_4:8368685-8368704 | None:intergenic | 35.0% |
| ! | ATTGTTTGAGTTTGGGAAGA+AGG | - | chr7_4:8368686-8368705 | None:intergenic | 35.0% |
| ! | GGAAAGTGATTGTTTGAGTT+TGG | - | chr7_4:8368694-8368713 | None:intergenic | 35.0% |
| CAAATGAGATGACCTAAAAG+AGG | - | chr7_4:8368738-8368757 | None:intergenic | 35.0% | |
| !! | CTCTTTTAGGTCATCTCATT+TGG | + | chr7_4:8368736-8368755 | Msa1138670:CDS | 35.0% |
| ! | CCCTTGATGAATTTGATGAT+TGG | - | chr7_4:8368780-8368799 | None:intergenic | 35.0% |
| ! | ACATGATCAAGCTTCTGTTT+TGG | + | chr7_4:8368914-8368933 | Msa1138670:CDS | 35.0% |
| !! | GTTACCGTTTTTCCAAACTA+TGG | + | chr7_4:8368945-8368964 | Msa1138670:CDS | 35.0% |
| !!! | TCACATCATGCTGTTTTAGA+TGG | + | chr7_4:8368987-8369006 | Msa1138670:CDS | 35.0% |
| AATTCTTGTGGCAAACAAAG+GGG | - | chr7_4:8369092-8369111 | None:intergenic | 35.0% | |
| CAAGGATCCAAATGAATTAG+AGG | + | chr7_4:8369139-8369158 | Msa1138670:CDS | 35.0% | |
| ! | TTGAGTGATTGGTTAAAGCA+AGG | + | chr7_4:8369170-8369189 | Msa1138670:CDS | 35.0% |
| !! | TGTCAAAACAAAAGGGTACT+AGG | + | chr7_4:8369306-8369325 | Msa1138670:CDS | 35.0% |
| TCTTCACTTGTCAACATTTG+TGG | + | chr7_4:8369343-8369362 | Msa1138670:CDS | 35.0% | |
| GGTATCTATTGCTTATGCAT+TGG | + | chr7_4:8369364-8369383 | Msa1138670:CDS | 35.0% | |
| ! | CCGATTCCTACAACATATTT+TGG | + | chr7_4:8369470-8369489 | Msa1138670:CDS | 35.0% |
| !! | TGGAGAAAATGGACTAATTG+TGG | + | chr7_4:8369541-8369560 | Msa1138670:CDS | 35.0% |
| TGTTGAATGGAGCTGAAAAT+TGG | + | chr7_4:8369609-8369628 | Msa1138670:CDS | 35.0% | |
| AGCACCAATTGCTTTAACAT+CGG | - | chr7_4:8369666-8369685 | None:intergenic | 35.0% | |
| !!! | GAGGTTTATAGCACTGATTT+TGG | + | chr7_4:8369704-8369723 | Msa1138670:CDS | 35.0% |
| !!! | TATAGCACTGATTTTGGTTG+TGG | + | chr7_4:8369710-8369729 | Msa1138670:CDS | 35.0% |
| TCTGATTGTAGAAATGGTGA+TGG | + | chr7_4:8369788-8369807 | Msa1138670:CDS | 35.0% | |
| GGTAGTTCTTCTTGTGAAGA+TGG | - | chr7_4:8368549-8368568 | None:intergenic | 40.0% | |
| !! | AAGAAATGTGAGGTTTGGTG+TGG | - | chr7_4:8368657-8368676 | None:intergenic | 40.0% |
| ATCAGCATGAGATTCAGCTA+TGG | - | chr7_4:8368820-8368839 | None:intergenic | 40.0% | |
| ! | AGTGATTGGTTAAAGCAAGG+TGG | + | chr7_4:8369173-8369192 | Msa1138670:CDS | 40.0% |
| TTCGGAGATCGAAAAGCTTA+AGG | + | chr7_4:8369274-8369293 | Msa1138670:CDS | 40.0% | |
| !! | TGGCTTTGAATATCGATTGC+CGG | + | chr7_4:8369432-8369451 | Msa1138670:CDS | 40.0% |
| !! | TGAAGTGTTGAGTGAAGCTT+TGG | + | chr7_4:8369568-8369587 | Msa1138670:CDS | 40.0% |
| !! | GAGCTGAAAATTGGTCTTCA+TGG | + | chr7_4:8369618-8369637 | Msa1138670:CDS | 40.0% |
| TGGTCTTCATGGTTACTTGA+AGG | + | chr7_4:8369629-8369648 | Msa1138670:CDS | 40.0% | |
| !! | TGCTGGTTCACCTAAATTTG+AGG | + | chr7_4:8369685-8369704 | Msa1138670:CDS | 40.0% |
| !! | AATGGTGATGGTGTTGAGAT+AGG | + | chr7_4:8369800-8369819 | Msa1138670:CDS | 40.0% |
| TTTGCTTCGCTCTTTGTCAA+AGG | + | chr7_4:8369854-8369873 | Msa1138670:CDS | 40.0% | |
| GGTAGTTCTTCTTGTGAAGA+TGG | - | chr7_4:8368549-8368568 | None:intergenic | 40.0% | |
| !! | AAGAAATGTGAGGTTTGGTG+TGG | - | chr7_4:8368657-8368676 | None:intergenic | 40.0% |
| ATCAGCATGAGATTCAGCTA+TGG | - | chr7_4:8368820-8368839 | None:intergenic | 40.0% | |
| ! | AGTGATTGGTTAAAGCAAGG+TGG | + | chr7_4:8369173-8369192 | Msa1138670:CDS | 40.0% |
| TTCGGAGATCGAAAAGCTTA+AGG | + | chr7_4:8369274-8369293 | Msa1138670:CDS | 40.0% | |
| !! | TGGCTTTGAATATCGATTGC+CGG | + | chr7_4:8369432-8369451 | Msa1138670:CDS | 40.0% |
| !! | TGAAGTGTTGAGTGAAGCTT+TGG | + | chr7_4:8369568-8369587 | Msa1138670:CDS | 40.0% |
| !! | GAGCTGAAAATTGGTCTTCA+TGG | + | chr7_4:8369618-8369637 | Msa1138670:CDS | 40.0% |
| TGGTCTTCATGGTTACTTGA+AGG | + | chr7_4:8369629-8369648 | Msa1138670:CDS | 40.0% | |
| !! | TGCTGGTTCACCTAAATTTG+AGG | + | chr7_4:8369685-8369704 | Msa1138670:CDS | 40.0% |
| !! | AATGGTGATGGTGTTGAGAT+AGG | + | chr7_4:8369800-8369819 | Msa1138670:CDS | 40.0% |
| TTTGCTTCGCTCTTTGTCAA+AGG | + | chr7_4:8369854-8369873 | Msa1138670:CDS | 40.0% | |
| AGAGGAAGTGAGGTTTCTGA+AGG | - | chr7_4:8368570-8368589 | None:intergenic | 45.0% | |
| TCGGCTGATCTAAACGATTC+CGG | - | chr7_4:8369454-8369473 | None:intergenic | 45.0% | |
| !! | GTTAAAGCAATTGGTGCTGC+TGG | + | chr7_4:8369668-8369687 | Msa1138670:CDS | 45.0% |
| AGAGGAAGTGAGGTTTCTGA+AGG | - | chr7_4:8368570-8368589 | None:intergenic | 45.0% | |
| TCGGCTGATCTAAACGATTC+CGG | - | chr7_4:8369454-8369473 | None:intergenic | 45.0% | |
| !! | GTTAAAGCAATTGGTGCTGC+TGG | + | chr7_4:8369668-8369687 | Msa1138670:CDS | 45.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 8368513 | 8369889 | 8368513 | ID=Msa1138670;Name=Msa1138670 |
| chr7_4 | mRNA | 8368513 | 8369889 | 8368513 | ID=Msa1138670-mRNA-1;Parent=Msa1138670;Name=Msa1138670-mRNA-1;_AED=0.00;_eAED=0.01;_QI=0|-1|0|1|-1|1|1|0|458 |
| chr7_4 | exon | 8368513 | 8369889 | 8368513 | ID=Msa1138670-mRNA-1:exon:2249;Parent=Msa1138670-mRNA-1 |
| chr7_4 | CDS | 8368513 | 8369889 | 8368513 | ID=Msa1138670-mRNA-1:cds;Parent=Msa1138670-mRNA-1 |
| Gene Sequence |
| Protein sequence |
