Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1009090 | XP_013447607.1 | 97.128 | 383 | 11 | 0 | 1 | 383 | 1 | 383 | 0.0 | 769 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1009090 | sp|Q9SYZ9|TAF8_ARATH | 38.547 | 358 | 187 | 9 | 30 | 383 | 25 | 353 | 5.39e-63 | 208 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1009090 | A0A072TXT6 | 97.128 | 383 | 11 | 0 | 1 | 383 | 1 | 383 | 0.0 | 769 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0112690 | Msa1009090 | 0.802669 | 5.027823e-49 | -8.615850e-47 |
| Msa0680660 | Msa1009090 | 0.813375 | 2.641998e-51 | -8.615850e-47 |
| Msa1009090 | Msa1352280 | -0.810840 | 9.437683e-51 | -8.615850e-47 |
| Msa1009090 | Msa1446880 | 0.992155 | 1.279048e-191 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1009090 | MtrunA17_Chr7g0219481 | 97.128 | 383 | 11 | 0 | 1 | 383 | 1 | 383 | 0.0 | 769 |
| Msa1009090 | MtrunA17_Chr1g0204531 | 36.559 | 372 | 191 | 9 | 19 | 383 | 21 | 354 | 2.44e-67 | 216 |
| Msa1009090 | MtrunA17_Chr3g0119651 | 35.754 | 179 | 107 | 2 | 30 | 200 | 41 | 219 | 1.02e-28 | 114 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1009090 | AT4G34340.1 | 38.547 | 358 | 187 | 9 | 30 | 383 | 25 | 353 | 5.48e-64 | 208 |
| Msa1009090 | AT3G02160.1 | 37.275 | 389 | 201 | 12 | 1 | 369 | 17 | 382 | 4.09e-62 | 205 |
| Msa1009090 | AT3G02160.2 | 37.275 | 389 | 201 | 12 | 1 | 369 | 17 | 382 | 4.09e-62 | 205 |
| Msa1009090 | AT5G15570.1 | 33.163 | 392 | 220 | 9 | 1 | 372 | 1 | 370 | 1.54e-57 | 192 |
| Msa1009090 | AT1G31240.1 | 32.075 | 159 | 90 | 5 | 30 | 176 | 25 | 177 | 1.48e-17 | 82.4 |
Find 102 sgRNAs with CRISPR-Local
Find 240 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTAGACTGCAAATAAGTTTC+TGG | 0.241510 | 7_1:-9967961 | None:intergenic |
| CTGTTAATTGCTTCGATTGC+TGG | 0.256193 | 7_1:-9968315 | None:intergenic |
| CATTCAAGGGTTAGAAGATA+TGG | 0.284263 | 7_1:+9967708 | Msa1009090:CDS |
| GGGACTAGAAATAAATTCTT+AGG | 0.286745 | 7_1:+9968411 | Msa1009090:CDS |
| TTTGAGCATGAAAGAGAAAA+TGG | 0.289815 | 7_1:+9968024 | Msa1009090:CDS |
| TGGAAGATTCGGGTGTTGTT+AGG | 0.296812 | 7_1:+9967776 | Msa1009090:CDS |
| TGCAAATAAGTTTCTGGATC+TGG | 0.298107 | 7_1:-9967955 | None:intergenic |
| GGGTCGATGCAGGGGTTTAC+AGG | 0.315837 | 7_1:+9967730 | Msa1009090:CDS |
| TTCCTCCTCCATGTGGTGTT+AGG | 0.324706 | 7_1:-9967478 | None:intergenic |
| TACAACTGAACAAGCTGATC+TGG | 0.339194 | 7_1:-9968561 | None:intergenic |
| TGATCACTGGCTGGAAGATT+CGG | 0.342375 | 7_1:+9967765 | Msa1009090:CDS |
| AGAAGATATGGGGTCGATGC+AGG | 0.364688 | 7_1:+9967720 | Msa1009090:CDS |
| AATTGTTATGCTAATCTTGC+TGG | 0.386896 | 7_1:+9967658 | Msa1009090:CDS |
| AGCGCAAGTATGCGAGAGTA+AGG | 0.398422 | 7_1:+9967552 | Msa1009090:CDS |
| ACCTTTGAAAATTGAGGATA+AGG | 0.400024 | 7_1:+9968179 | Msa1009090:CDS |
| ACAACCGGAAACGGAGGAAT+CGG | 0.405532 | 7_1:-9967847 | None:intergenic |
| TGCTGCACCTTTGAAAATTG+AGG | 0.408083 | 7_1:+9968173 | Msa1009090:CDS |
| ATCTTTGCCTTAGCAACTGC+AGG | 0.412744 | 7_1:-9968123 | None:intergenic |
| GCCTCCTGATGAGCATATTC+CGG | 0.414106 | 7_1:+9967915 | Msa1009090:CDS |
| AAATGAACCTGGTTCAGTAT+TGG | 0.417907 | 7_1:+9968281 | Msa1009090:CDS |
| GATCACTGGCTGGAAGATTC+GGG | 0.423694 | 7_1:+9967766 | Msa1009090:CDS |
| AGCACACGTTCTTTCACAAC+CGG | 0.426319 | 7_1:-9967862 | None:intergenic |
| CGTTCTTTCACAACCGGAAA+CGG | 0.426775 | 7_1:-9967856 | None:intergenic |
| GTTTGTTAATGAGGCTGAAC+CGG | 0.428268 | 7_1:+9967810 | Msa1009090:CDS |
| TTGCAGTCTACTACGGTGAA+TGG | 0.434590 | 7_1:+9967973 | Msa1009090:CDS |
| ATCGGGTGTGCAAACATAAC+CGG | 0.444368 | 7_1:-9967829 | None:intergenic |
| CTCGGTATATTATGAACATT+GGG | 0.445223 | 7_1:+9967626 | Msa1009090:CDS |
| ACACCCGATTCCTCCGTTTC+CGG | 0.449315 | 7_1:+9967843 | Msa1009090:CDS |
| CATGCCGGAATATGCTCATC+AGG | 0.452423 | 7_1:-9967919 | None:intergenic |
| ATTCAAGGGTTAGAAGATAT+GGG | 0.455691 | 7_1:+9967709 | Msa1009090:CDS |
| CTGATCTTCCTTGGAATCAC+AGG | 0.456719 | 7_1:-9968343 | None:intergenic |
| AGCAATGGCAATGGGAAGAC+TGG | 0.457562 | 7_1:+9967436 | Msa1009090:CDS |
| ACATTATTAAAGAATTTAGC+TGG | 0.459746 | 7_1:-9968222 | None:intergenic |
| GGAAGATTCGGGTGTTGTTA+GGG | 0.459880 | 7_1:+9967777 | Msa1009090:CDS |
| AATTGTTCAGTTTGTTAATG+AGG | 0.463759 | 7_1:+9967801 | Msa1009090:CDS |
| GCAAATAAGTTTCTGGATCT+GGG | 0.468046 | 7_1:-9967954 | None:intergenic |
| AAATTCTTAGGAAGGTCAAT+TGG | 0.468574 | 7_1:+9968423 | Msa1009090:CDS |
| TCAAAGGTGCAGCAAGGAAA+GGG | 0.483213 | 7_1:-9968164 | None:intergenic |
| TTCTCTTTCATGCTCAAATG+TGG | 0.493502 | 7_1:-9968019 | None:intergenic |
| ACAGTAGGTTTCTCTTTCAC+AGG | 0.495987 | 7_1:-9968375 | None:intergenic |
| GTTGCTAAGGCAAAGATAGT+AGG | 0.495988 | 7_1:+9968129 | Msa1009090:CDS |
| TTCAAAGGTGCAGCAAGGAA+AGG | 0.498870 | 7_1:-9968165 | None:intergenic |
| ATTAAAGAATTTAGCTGGAG+GGG | 0.500157 | 7_1:-9968217 | None:intergenic |
| GCTCGGTATATTATGAACAT+TGG | 0.501430 | 7_1:+9967625 | Msa1009090:CDS |
| GACTTTGCCGTGGTTTGCGA+TGG | 0.512129 | 7_1:+9968476 | Msa1009090:CDS |
| AGAAGGATGACAGGAAAAGA+AGG | 0.514396 | 7_1:+9968505 | Msa1009090:CDS |
| ACAACTGAACAAGCTGATCT+GGG | 0.515730 | 7_1:-9968560 | None:intergenic |
| GTTTCTGGATCTGGGAATGC+AGG | 0.522357 | 7_1:-9967946 | None:intergenic |
| ATTTGCACAATCTATTGCTA+AGG | 0.522859 | 7_1:+9967522 | Msa1009090:CDS |
| AACTTATTTGCAGTCTACTA+CGG | 0.528437 | 7_1:+9967966 | Msa1009090:CDS |
| CAACCGGAAACGGAGGAATC+GGG | 0.529236 | 7_1:-9967846 | None:intergenic |
| ATTTCAGCAGTCGGCACTTG+AGG | 0.533229 | 7_1:+9967585 | Msa1009090:CDS |
| TTTGAATTCACAGCAGCAGA+TGG | 0.533640 | 7_1:+9968065 | Msa1009090:CDS |
| TCTTTCATGCTCAAATGTGG+TGG | 0.534234 | 7_1:-9968016 | None:intergenic |
| GGTTGACCCTGCAGTTGCTA+AGG | 0.536793 | 7_1:+9968116 | Msa1009090:CDS |
| GAAGATATGGGGTCGATGCA+GGG | 0.539421 | 7_1:+9967721 | Msa1009090:CDS |
| TCTACTACGGTGAATGGAAG+AGG | 0.539817 | 7_1:+9967979 | Msa1009090:CDS |
| GGGAATGCAGGCAACCATGC+CGG | 0.545485 | 7_1:-9967934 | None:intergenic |
| TGCTGCTGTGAATTCAAAAG+AGG | 0.547809 | 7_1:-9968060 | None:intergenic |
| CAGTGCATCCTGTGATTCCA+AGG | 0.552165 | 7_1:+9968335 | Msa1009090:CDS |
| TGCTTCGATTGCTGGAGCAA+AGG | 0.552344 | 7_1:-9968307 | None:intergenic |
| TGGAAGACGAGAAGGATGAC+AGG | 0.552952 | 7_1:+9968496 | Msa1009090:CDS |
| AGGAGGAAGAAAGTGGGTGG+TGG | 0.558907 | 7_1:+9967493 | Msa1009090:CDS |
| CACTTTCTTCCTCCTCCATG+TGG | 0.568483 | 7_1:-9967485 | None:intergenic |
| TATTAAAGAATTTAGCTGGA+GGG | 0.569693 | 7_1:-9968218 | None:intergenic |
| CTGAATATGAGCAATGGCAA+TGG | 0.574328 | 7_1:+9967427 | None:intergenic |
| AATTTAGTTCAAAATGAACC+TGG | 0.577666 | 7_1:+9968270 | Msa1009090:CDS |
| TGAATATGAGCAATGGCAAT+GGG | 0.579503 | 7_1:+9967428 | None:intergenic |
| ATGAAAGAGAAAATGGCAAG+GGG | 0.579675 | 7_1:+9968031 | Msa1009090:CDS |
| TTCAGATATTGATCACTGGC+TGG | 0.579893 | 7_1:+9967756 | Msa1009090:CDS |
| CTAGAAATAAATTCTTAGGA+AGG | 0.582756 | 7_1:+9968415 | Msa1009090:CDS |
| AAGATATGGGGTCGATGCAG+GGG | 0.587409 | 7_1:+9967722 | Msa1009090:CDS |
| GTGCTTCAGATATTGATCAC+TGG | 0.588992 | 7_1:+9967752 | Msa1009090:CDS |
| GAAGGATGACAGGAAAAGAA+GGG | 0.590614 | 7_1:+9968506 | Msa1009090:CDS |
| AAGGTCTCCAATACTGAACC+AGG | 0.595021 | 7_1:-9968288 | None:intergenic |
| TGCTCAAATGTGGTGGTACG+AGG | 0.598822 | 7_1:-9968009 | None:intergenic |
| CACATGGAGGAGGAAGAAAG+TGG | 0.601802 | 7_1:+9967486 | Msa1009090:CDS |
| AGCCTAACACCACATGGAGG+AGG | 0.608643 | 7_1:+9967476 | Msa1009090:CDS |
| GTTTGCGATGGAAGACGAGA+AGG | 0.609541 | 7_1:+9968488 | Msa1009090:CDS |
| CAATGTCTGATGTTACTGCT+CGG | 0.615655 | 7_1:+9967608 | Msa1009090:CDS |
| TCTTTCACAACCGGAAACGG+AGG | 0.621110 | 7_1:-9967853 | None:intergenic |
| CATGAAAGAGAAAATGGCAA+GGG | 0.622571 | 7_1:+9968030 | Msa1009090:CDS |
| CCAACCTTAAAACGTACAGT+AGG | 0.627191 | 7_1:-9968390 | None:intergenic |
| GCGCAAGTATGCGAGAGTAA+GGG | 0.628011 | 7_1:+9967553 | Msa1009090:CDS |
| CTGATGAGCATATTCCGGCA+TGG | 0.628590 | 7_1:+9967920 | Msa1009090:CDS |
| AACAACAGCCTAACACCACA+TGG | 0.631098 | 7_1:+9967470 | Msa1009090:CDS |
| AGCAACTGCAGGGTCAACCA+TGG | 0.649507 | 7_1:-9968112 | None:intergenic |
| TTCAAGGGTTAGAAGATATG+GGG | 0.654625 | 7_1:+9967710 | Msa1009090:CDS |
| CTACTACGGTGAATGGAAGA+GGG | 0.654716 | 7_1:+9967980 | Msa1009090:CDS |
| TCTTTGCCTTAGCAACTGCA+GGG | 0.654727 | 7_1:-9968122 | None:intergenic |
| GCATGAAAGAGAAAATGGCA+AGG | 0.663461 | 7_1:+9968029 | Msa1009090:CDS |
| TTATTAAAGAATTTAGCTGG+AGG | 0.669528 | 7_1:-9968219 | None:intergenic |
| GCCGGAATATGCTCATCAGG+AGG | 0.672120 | 7_1:-9967916 | None:intergenic |
| GAAGTGCTGAATATGAGCAA+TGG | 0.677775 | 7_1:+9967421 | None:intergenic |
| ACATGGAGGAGGAAGAAAGT+GGG | 0.687005 | 7_1:+9967487 | Msa1009090:CDS |
| TCGTCTTCCATCGCAAACCA+CGG | 0.690094 | 7_1:-9968483 | None:intergenic |
| TGGAGGAGGAAGAAAGTGGG+TGG | 0.692123 | 7_1:+9967490 | Msa1009090:CDS |
| AGCATGCAAAGACTTTGCCG+TGG | 0.700393 | 7_1:+9968466 | Msa1009090:CDS |
| AACTGCAGGGTCAACCATGG+TGG | 0.704928 | 7_1:-9968109 | None:intergenic |
| TATGTTTGAGAACTCCACCA+TGG | 0.713816 | 7_1:+9968095 | Msa1009090:CDS |
| TGAAAGAGAAAATGGCAAGG+GGG | 0.750807 | 7_1:+9968032 | Msa1009090:CDS |
| AACAGCCTAACACCACATGG+AGG | 0.752752 | 7_1:+9967473 | Msa1009090:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACATTATTAAAGAATTTAGC+TGG | - | chr7_1:9968225-9968244 | None:intergenic | 20.0% |
| !! | ACATTATTAAAGAATTTAGC+TGG | - | chr7_1:9968225-9968244 | None:intergenic | 20.0% |
| !!! | AATGTTTTTGATGTCATTCA+AGG | + | chr7_1:9967694-9967713 | Msa1009090:CDS | 25.0% |
| !!! | ATGTTTTTGATGTCATTCAA+GGG | + | chr7_1:9967695-9967714 | Msa1009090:CDS | 25.0% |
| !!! | AATTGTTCAGTTTGTTAATG+AGG | + | chr7_1:9967801-9967820 | Msa1009090:CDS | 25.0% |
| ! | TATTAAAGAATTTAGCTGGA+GGG | - | chr7_1:9968221-9968240 | None:intergenic | 25.0% |
| ! | TTATTAAAGAATTTAGCTGG+AGG | - | chr7_1:9968222-9968241 | None:intergenic | 25.0% |
| !! | TGAACTAAATTTTCTACAAC+TGG | - | chr7_1:9968261-9968280 | None:intergenic | 25.0% |
| !! | AATTTAGTTCAAAATGAACC+TGG | + | chr7_1:9968270-9968289 | Msa1009090:CDS | 25.0% |
| ! | CTAGAAATAAATTCTTAGGA+AGG | + | chr7_1:9968415-9968434 | Msa1009090:CDS | 25.0% |
| !!! | AATGTTTTTGATGTCATTCA+AGG | + | chr7_1:9967694-9967713 | Msa1009090:CDS | 25.0% |
| !!! | ATGTTTTTGATGTCATTCAA+GGG | + | chr7_1:9967695-9967714 | Msa1009090:CDS | 25.0% |
| !!! | AATTGTTCAGTTTGTTAATG+AGG | + | chr7_1:9967801-9967820 | Msa1009090:CDS | 25.0% |
| ! | TATTAAAGAATTTAGCTGGA+GGG | - | chr7_1:9968221-9968240 | None:intergenic | 25.0% |
| ! | TTATTAAAGAATTTAGCTGG+AGG | - | chr7_1:9968222-9968241 | None:intergenic | 25.0% |
| !! | TGAACTAAATTTTCTACAAC+TGG | - | chr7_1:9968261-9968280 | None:intergenic | 25.0% |
| !! | AATTTAGTTCAAAATGAACC+TGG | + | chr7_1:9968270-9968289 | Msa1009090:CDS | 25.0% |
| ! | CTAGAAATAAATTCTTAGGA+AGG | + | chr7_1:9968415-9968434 | Msa1009090:CDS | 25.0% |
| ATTTGCACAATCTATTGCTA+AGG | + | chr7_1:9967522-9967541 | Msa1009090:CDS | 30.0% | |
| CTCGGTATATTATGAACATT+GGG | + | chr7_1:9967626-9967645 | Msa1009090:CDS | 30.0% | |
| AATTGTTATGCTAATCTTGC+TGG | + | chr7_1:9967658-9967677 | Msa1009090:CDS | 30.0% | |
| ATTCAAGGGTTAGAAGATAT+GGG | + | chr7_1:9967709-9967728 | Msa1009090:CDS | 30.0% | |
| AACTTATTTGCAGTCTACTA+CGG | + | chr7_1:9967966-9967985 | Msa1009090:CDS | 30.0% | |
| TTTGAGCATGAAAGAGAAAA+TGG | + | chr7_1:9968024-9968043 | Msa1009090:CDS | 30.0% | |
| ! | ACCTTTGAAAATTGAGGATA+AGG | + | chr7_1:9968179-9968198 | Msa1009090:CDS | 30.0% |
| ! | TCCTTATCCTCAATTTTCAA+AGG | - | chr7_1:9968183-9968202 | None:intergenic | 30.0% |
| ATTAAAGAATTTAGCTGGAG+GGG | - | chr7_1:9968220-9968239 | None:intergenic | 30.0% | |
| ! | AAATTTTGTCTGATCTTCCT+TGG | - | chr7_1:9968355-9968374 | None:intergenic | 30.0% |
| GGGACTAGAAATAAATTCTT+AGG | + | chr7_1:9968411-9968430 | Msa1009090:CDS | 30.0% | |
| AAATTCTTAGGAAGGTCAAT+TGG | + | chr7_1:9968423-9968442 | Msa1009090:CDS | 30.0% | |
| ! | AGATTCCCTCAAAATTTTCT+CGG | - | chr7_1:9968532-9968551 | None:intergenic | 30.0% |
| !! | GAAAATTTTGAGGGAATCTT+TGG | + | chr7_1:9968533-9968552 | Msa1009090:CDS | 30.0% |
| ATTTGCACAATCTATTGCTA+AGG | + | chr7_1:9967522-9967541 | Msa1009090:CDS | 30.0% | |
| CTCGGTATATTATGAACATT+GGG | + | chr7_1:9967626-9967645 | Msa1009090:CDS | 30.0% | |
| AATTGTTATGCTAATCTTGC+TGG | + | chr7_1:9967658-9967677 | Msa1009090:CDS | 30.0% | |
| ATTCAAGGGTTAGAAGATAT+GGG | + | chr7_1:9967709-9967728 | Msa1009090:CDS | 30.0% | |
| AACTTATTTGCAGTCTACTA+CGG | + | chr7_1:9967966-9967985 | Msa1009090:CDS | 30.0% | |
| TTTGAGCATGAAAGAGAAAA+TGG | + | chr7_1:9968024-9968043 | Msa1009090:CDS | 30.0% | |
| ! | ACCTTTGAAAATTGAGGATA+AGG | + | chr7_1:9968179-9968198 | Msa1009090:CDS | 30.0% |
| ! | TCCTTATCCTCAATTTTCAA+AGG | - | chr7_1:9968183-9968202 | None:intergenic | 30.0% |
| ATTAAAGAATTTAGCTGGAG+GGG | - | chr7_1:9968220-9968239 | None:intergenic | 30.0% | |
| ! | AAATTTTGTCTGATCTTCCT+TGG | - | chr7_1:9968355-9968374 | None:intergenic | 30.0% |
| GGGACTAGAAATAAATTCTT+AGG | + | chr7_1:9968411-9968430 | Msa1009090:CDS | 30.0% | |
| AAATTCTTAGGAAGGTCAAT+TGG | + | chr7_1:9968423-9968442 | Msa1009090:CDS | 30.0% | |
| ! | AGATTCCCTCAAAATTTTCT+CGG | - | chr7_1:9968532-9968551 | None:intergenic | 30.0% |
| !! | GAAAATTTTGAGGGAATCTT+TGG | + | chr7_1:9968533-9968552 | Msa1009090:CDS | 30.0% |
| !! | TTTTCAAGGATTTCAGCAGT+CGG | + | chr7_1:9967576-9967595 | Msa1009090:CDS | 35.0% |
| GCTCGGTATATTATGAACAT+TGG | + | chr7_1:9967625-9967644 | Msa1009090:CDS | 35.0% | |
| CATTCAAGGGTTAGAAGATA+TGG | + | chr7_1:9967708-9967727 | Msa1009090:CDS | 35.0% | |
| TTCAAGGGTTAGAAGATATG+GGG | + | chr7_1:9967710-9967729 | Msa1009090:CDS | 35.0% | |
| TCTCCTCTTTGCAAAAAACT+GGG | - | chr7_1:9967892-9967911 | None:intergenic | 35.0% | |
| TTCTCCTCTTTGCAAAAAAC+TGG | - | chr7_1:9967893-9967912 | None:intergenic | 35.0% | |
| ! | GCAAATAAGTTTCTGGATCT+GGG | - | chr7_1:9967957-9967976 | None:intergenic | 35.0% |
| ! | TGCAAATAAGTTTCTGGATC+TGG | - | chr7_1:9967958-9967977 | None:intergenic | 35.0% |
| GTAGACTGCAAATAAGTTTC+TGG | - | chr7_1:9967964-9967983 | None:intergenic | 35.0% | |
| TTCTCTTTCATGCTCAAATG+TGG | - | chr7_1:9968022-9968041 | None:intergenic | 35.0% | |
| CATGAAAGAGAAAATGGCAA+GGG | + | chr7_1:9968030-9968049 | Msa1009090:CDS | 35.0% | |
| ATGAAAGAGAAAATGGCAAG+GGG | + | chr7_1:9968031-9968050 | Msa1009090:CDS | 35.0% | |
| AAATGAACCTGGTTCAGTAT+TGG | + | chr7_1:9968281-9968300 | Msa1009090:CDS | 35.0% | |
| ! | GAAACCTACTGTACGTTTTA+AGG | + | chr7_1:9968386-9968405 | Msa1009090:CDS | 35.0% |
| !!! | CTACTGTACGTTTTAAGGTT+GGG | + | chr7_1:9968391-9968410 | Msa1009090:CDS | 35.0% |
| TGGTTTGATTCCACAAAAAG+AGG | + | chr7_1:9968443-9968462 | Msa1009090:CDS | 35.0% | |
| !! | TTTTCAAGGATTTCAGCAGT+CGG | + | chr7_1:9967576-9967595 | Msa1009090:CDS | 35.0% |
| GCTCGGTATATTATGAACAT+TGG | + | chr7_1:9967625-9967644 | Msa1009090:CDS | 35.0% | |
| CATTCAAGGGTTAGAAGATA+TGG | + | chr7_1:9967708-9967727 | Msa1009090:CDS | 35.0% | |
| TTCAAGGGTTAGAAGATATG+GGG | + | chr7_1:9967710-9967729 | Msa1009090:CDS | 35.0% | |
| TCTCCTCTTTGCAAAAAACT+GGG | - | chr7_1:9967892-9967911 | None:intergenic | 35.0% | |
| TTCTCCTCTTTGCAAAAAAC+TGG | - | chr7_1:9967893-9967912 | None:intergenic | 35.0% | |
| ! | GCAAATAAGTTTCTGGATCT+GGG | - | chr7_1:9967957-9967976 | None:intergenic | 35.0% |
| ! | TGCAAATAAGTTTCTGGATC+TGG | - | chr7_1:9967958-9967977 | None:intergenic | 35.0% |
| GTAGACTGCAAATAAGTTTC+TGG | - | chr7_1:9967964-9967983 | None:intergenic | 35.0% | |
| TTCTCTTTCATGCTCAAATG+TGG | - | chr7_1:9968022-9968041 | None:intergenic | 35.0% | |
| CATGAAAGAGAAAATGGCAA+GGG | + | chr7_1:9968030-9968049 | Msa1009090:CDS | 35.0% | |
| ATGAAAGAGAAAATGGCAAG+GGG | + | chr7_1:9968031-9968050 | Msa1009090:CDS | 35.0% | |
| AAATGAACCTGGTTCAGTAT+TGG | + | chr7_1:9968281-9968300 | Msa1009090:CDS | 35.0% | |
| ! | GAAACCTACTGTACGTTTTA+AGG | + | chr7_1:9968386-9968405 | Msa1009090:CDS | 35.0% |
| !!! | CTACTGTACGTTTTAAGGTT+GGG | + | chr7_1:9968391-9968410 | Msa1009090:CDS | 35.0% |
| TGGTTTGATTCCACAAAAAG+AGG | + | chr7_1:9968443-9968462 | Msa1009090:CDS | 35.0% | |
| CAATGTCTGATGTTACTGCT+CGG | + | chr7_1:9967608-9967627 | Msa1009090:CDS | 40.0% | |
| GTGCTTCAGATATTGATCAC+TGG | + | chr7_1:9967752-9967771 | Msa1009090:CDS | 40.0% | |
| TTCAGATATTGATCACTGGC+TGG | + | chr7_1:9967756-9967775 | Msa1009090:CDS | 40.0% | |
| ! | GTTTGTTAATGAGGCTGAAC+CGG | + | chr7_1:9967810-9967829 | Msa1009090:CDS | 40.0% |
| TCTTTCATGCTCAAATGTGG+TGG | - | chr7_1:9968019-9968038 | None:intergenic | 40.0% | |
| GCATGAAAGAGAAAATGGCA+AGG | + | chr7_1:9968029-9968048 | Msa1009090:CDS | 40.0% | |
| TGAAAGAGAAAATGGCAAGG+GGG | + | chr7_1:9968032-9968051 | Msa1009090:CDS | 40.0% | |
| TGCTGCTGTGAATTCAAAAG+AGG | - | chr7_1:9968063-9968082 | None:intergenic | 40.0% | |
| TTTGAATTCACAGCAGCAGA+TGG | + | chr7_1:9968065-9968084 | Msa1009090:CDS | 40.0% | |
| TATGTTTGAGAACTCCACCA+TGG | + | chr7_1:9968095-9968114 | Msa1009090:CDS | 40.0% | |
| GTTGCTAAGGCAAAGATAGT+AGG | + | chr7_1:9968129-9968148 | Msa1009090:CDS | 40.0% | |
| !! | CAATTTTCAAAGGTGCAGCA+AGG | - | chr7_1:9968173-9968192 | None:intergenic | 40.0% |
| ! | TGCTGCACCTTTGAAAATTG+AGG | + | chr7_1:9968173-9968192 | Msa1009090:CDS | 40.0% |
| CTGTTAATTGCTTCGATTGC+TGG | - | chr7_1:9968318-9968337 | None:intergenic | 40.0% | |
| ACAGTAGGTTTCTCTTTCAC+AGG | - | chr7_1:9968378-9968397 | None:intergenic | 40.0% | |
| CCAACCTTAAAACGTACAGT+AGG | - | chr7_1:9968393-9968412 | None:intergenic | 40.0% | |
| !!! | CCTACTGTACGTTTTAAGGT+TGG | + | chr7_1:9968390-9968409 | Msa1009090:CDS | 40.0% |
| ! | TTTGCATGCTCCTCTTTTTG+TGG | - | chr7_1:9968456-9968475 | None:intergenic | 40.0% |
| AGAAGGATGACAGGAAAAGA+AGG | + | chr7_1:9968505-9968524 | Msa1009090:CDS | 40.0% | |
| GAAGGATGACAGGAAAAGAA+GGG | + | chr7_1:9968506-9968525 | Msa1009090:CDS | 40.0% | |
| ! | AAGGGCCGAGAAAATTTTGA+GGG | + | chr7_1:9968524-9968543 | Msa1009090:CDS | 40.0% |
| ACAACTGAACAAGCTGATCT+GGG | - | chr7_1:9968563-9968582 | None:intergenic | 40.0% | |
| TACAACTGAACAAGCTGATC+TGG | - | chr7_1:9968564-9968583 | None:intergenic | 40.0% | |
| CAATGTCTGATGTTACTGCT+CGG | + | chr7_1:9967608-9967627 | Msa1009090:CDS | 40.0% | |
| GTGCTTCAGATATTGATCAC+TGG | + | chr7_1:9967752-9967771 | Msa1009090:CDS | 40.0% | |
| TTCAGATATTGATCACTGGC+TGG | + | chr7_1:9967756-9967775 | Msa1009090:CDS | 40.0% | |
| ! | GTTTGTTAATGAGGCTGAAC+CGG | + | chr7_1:9967810-9967829 | Msa1009090:CDS | 40.0% |
| TCTTTCATGCTCAAATGTGG+TGG | - | chr7_1:9968019-9968038 | None:intergenic | 40.0% | |
| GCATGAAAGAGAAAATGGCA+AGG | + | chr7_1:9968029-9968048 | Msa1009090:CDS | 40.0% | |
| TGAAAGAGAAAATGGCAAGG+GGG | + | chr7_1:9968032-9968051 | Msa1009090:CDS | 40.0% | |
| TGCTGCTGTGAATTCAAAAG+AGG | - | chr7_1:9968063-9968082 | None:intergenic | 40.0% | |
| TTTGAATTCACAGCAGCAGA+TGG | + | chr7_1:9968065-9968084 | Msa1009090:CDS | 40.0% | |
| TATGTTTGAGAACTCCACCA+TGG | + | chr7_1:9968095-9968114 | Msa1009090:CDS | 40.0% | |
| GTTGCTAAGGCAAAGATAGT+AGG | + | chr7_1:9968129-9968148 | Msa1009090:CDS | 40.0% | |
| !! | CAATTTTCAAAGGTGCAGCA+AGG | - | chr7_1:9968173-9968192 | None:intergenic | 40.0% |
| ! | TGCTGCACCTTTGAAAATTG+AGG | + | chr7_1:9968173-9968192 | Msa1009090:CDS | 40.0% |
| CTGTTAATTGCTTCGATTGC+TGG | - | chr7_1:9968318-9968337 | None:intergenic | 40.0% | |
| ACAGTAGGTTTCTCTTTCAC+AGG | - | chr7_1:9968378-9968397 | None:intergenic | 40.0% | |
| CCAACCTTAAAACGTACAGT+AGG | - | chr7_1:9968393-9968412 | None:intergenic | 40.0% | |
| !!! | CCTACTGTACGTTTTAAGGT+TGG | + | chr7_1:9968390-9968409 | Msa1009090:CDS | 40.0% |
| ! | TTTGCATGCTCCTCTTTTTG+TGG | - | chr7_1:9968456-9968475 | None:intergenic | 40.0% |
| AGAAGGATGACAGGAAAAGA+AGG | + | chr7_1:9968505-9968524 | Msa1009090:CDS | 40.0% | |
| GAAGGATGACAGGAAAAGAA+GGG | + | chr7_1:9968506-9968525 | Msa1009090:CDS | 40.0% | |
| ! | AAGGGCCGAGAAAATTTTGA+GGG | + | chr7_1:9968524-9968543 | Msa1009090:CDS | 40.0% |
| ACAACTGAACAAGCTGATCT+GGG | - | chr7_1:9968563-9968582 | None:intergenic | 40.0% | |
| TACAACTGAACAAGCTGATC+TGG | - | chr7_1:9968564-9968583 | None:intergenic | 40.0% | |
| AACAACAGCCTAACACCACA+TGG | + | chr7_1:9967470-9967489 | Msa1009090:CDS | 45.0% | |
| ACATGGAGGAGGAAGAAAGT+GGG | + | chr7_1:9967487-9967506 | Msa1009090:CDS | 45.0% | |
| ! | TGCGAGAGTAAGGGTTTTCA+AGG | + | chr7_1:9967562-9967581 | Msa1009090:CDS | 45.0% |
| ! | TGATCACTGGCTGGAAGATT+CGG | + | chr7_1:9967765-9967784 | Msa1009090:CDS | 45.0% |
| !! | TGGAAGATTCGGGTGTTGTT+AGG | + | chr7_1:9967776-9967795 | Msa1009090:CDS | 45.0% |
| !! | GGAAGATTCGGGTGTTGTTA+GGG | + | chr7_1:9967777-9967796 | Msa1009090:CDS | 45.0% |
| ATCGGGTGTGCAAACATAAC+CGG | - | chr7_1:9967832-9967851 | None:intergenic | 45.0% | |
| CGTTCTTTCACAACCGGAAA+CGG | - | chr7_1:9967859-9967878 | None:intergenic | 45.0% | |
| AGCACACGTTCTTTCACAAC+CGG | - | chr7_1:9967865-9967884 | None:intergenic | 45.0% | |
| CCTCTTTGCAAAAAACTGGG+AGG | - | chr7_1:9967889-9967908 | None:intergenic | 45.0% | |
| !!! | CCTCCCAGTTTTTTGCAAAG+AGG | + | chr7_1:9967886-9967905 | Msa1009090:CDS | 45.0% |
| TTGCAGTCTACTACGGTGAA+TGG | + | chr7_1:9967973-9967992 | Msa1009090:CDS | 45.0% | |
| TCTACTACGGTGAATGGAAG+AGG | + | chr7_1:9967979-9967998 | Msa1009090:CDS | 45.0% | |
| CTACTACGGTGAATGGAAGA+GGG | + | chr7_1:9967980-9967999 | Msa1009090:CDS | 45.0% | |
| TCTTTGCCTTAGCAACTGCA+GGG | - | chr7_1:9968125-9968144 | None:intergenic | 45.0% | |
| ATCTTTGCCTTAGCAACTGC+AGG | - | chr7_1:9968126-9968145 | None:intergenic | 45.0% | |
| ! | TCAAAGGTGCAGCAAGGAAA+GGG | - | chr7_1:9968167-9968186 | None:intergenic | 45.0% |
| ! | TTCAAAGGTGCAGCAAGGAA+AGG | - | chr7_1:9968168-9968187 | None:intergenic | 45.0% |
| AAGGTCTCCAATACTGAACC+AGG | - | chr7_1:9968291-9968310 | None:intergenic | 45.0% | |
| CTGATCTTCCTTGGAATCAC+AGG | - | chr7_1:9968346-9968365 | None:intergenic | 45.0% | |
| ! | GAAGGGCCGAGAAAATTTTG+AGG | + | chr7_1:9968523-9968542 | Msa1009090:CDS | 45.0% |
| AACAACAGCCTAACACCACA+TGG | + | chr7_1:9967470-9967489 | Msa1009090:CDS | 45.0% | |
| ACATGGAGGAGGAAGAAAGT+GGG | + | chr7_1:9967487-9967506 | Msa1009090:CDS | 45.0% | |
| ! | TGCGAGAGTAAGGGTTTTCA+AGG | + | chr7_1:9967562-9967581 | Msa1009090:CDS | 45.0% |
| ! | TGATCACTGGCTGGAAGATT+CGG | + | chr7_1:9967765-9967784 | Msa1009090:CDS | 45.0% |
| !! | TGGAAGATTCGGGTGTTGTT+AGG | + | chr7_1:9967776-9967795 | Msa1009090:CDS | 45.0% |
| !! | GGAAGATTCGGGTGTTGTTA+GGG | + | chr7_1:9967777-9967796 | Msa1009090:CDS | 45.0% |
| ATCGGGTGTGCAAACATAAC+CGG | - | chr7_1:9967832-9967851 | None:intergenic | 45.0% | |
| CGTTCTTTCACAACCGGAAA+CGG | - | chr7_1:9967859-9967878 | None:intergenic | 45.0% | |
| AGCACACGTTCTTTCACAAC+CGG | - | chr7_1:9967865-9967884 | None:intergenic | 45.0% | |
| CCTCTTTGCAAAAAACTGGG+AGG | - | chr7_1:9967889-9967908 | None:intergenic | 45.0% | |
| !!! | CCTCCCAGTTTTTTGCAAAG+AGG | + | chr7_1:9967886-9967905 | Msa1009090:CDS | 45.0% |
| TTGCAGTCTACTACGGTGAA+TGG | + | chr7_1:9967973-9967992 | Msa1009090:CDS | 45.0% | |
| TCTACTACGGTGAATGGAAG+AGG | + | chr7_1:9967979-9967998 | Msa1009090:CDS | 45.0% | |
| CTACTACGGTGAATGGAAGA+GGG | + | chr7_1:9967980-9967999 | Msa1009090:CDS | 45.0% | |
| TCTTTGCCTTAGCAACTGCA+GGG | - | chr7_1:9968125-9968144 | None:intergenic | 45.0% | |
| ATCTTTGCCTTAGCAACTGC+AGG | - | chr7_1:9968126-9968145 | None:intergenic | 45.0% | |
| ! | TCAAAGGTGCAGCAAGGAAA+GGG | - | chr7_1:9968167-9968186 | None:intergenic | 45.0% |
| ! | TTCAAAGGTGCAGCAAGGAA+AGG | - | chr7_1:9968168-9968187 | None:intergenic | 45.0% |
| AAGGTCTCCAATACTGAACC+AGG | - | chr7_1:9968291-9968310 | None:intergenic | 45.0% | |
| CTGATCTTCCTTGGAATCAC+AGG | - | chr7_1:9968346-9968365 | None:intergenic | 45.0% | |
| ! | GAAGGGCCGAGAAAATTTTG+AGG | + | chr7_1:9968523-9968542 | Msa1009090:CDS | 45.0% |
| AGCAATGGCAATGGGAAGAC+TGG | + | chr7_1:9967436-9967455 | Msa1009090:CDS | 50.0% | |
| AACAGCCTAACACCACATGG+AGG | + | chr7_1:9967473-9967492 | Msa1009090:CDS | 50.0% | |
| TTCCTCCTCCATGTGGTGTT+AGG | - | chr7_1:9967481-9967500 | None:intergenic | 50.0% | |
| CACTTTCTTCCTCCTCCATG+TGG | - | chr7_1:9967488-9967507 | None:intergenic | 50.0% | |
| CACATGGAGGAGGAAGAAAG+TGG | + | chr7_1:9967486-9967505 | Msa1009090:CDS | 50.0% | |
| AGCGCAAGTATGCGAGAGTA+AGG | + | chr7_1:9967552-9967571 | Msa1009090:CDS | 50.0% | |
| GCGCAAGTATGCGAGAGTAA+GGG | + | chr7_1:9967553-9967572 | Msa1009090:CDS | 50.0% | |
| ATTTCAGCAGTCGGCACTTG+AGG | + | chr7_1:9967585-9967604 | Msa1009090:CDS | 50.0% | |
| AGAAGATATGGGGTCGATGC+AGG | + | chr7_1:9967720-9967739 | Msa1009090:CDS | 50.0% | |
| GAAGATATGGGGTCGATGCA+GGG | + | chr7_1:9967721-9967740 | Msa1009090:CDS | 50.0% | |
| AAGATATGGGGTCGATGCAG+GGG | + | chr7_1:9967722-9967741 | Msa1009090:CDS | 50.0% | |
| ! | GATCACTGGCTGGAAGATTC+GGG | + | chr7_1:9967766-9967785 | Msa1009090:CDS | 50.0% |
| ACAACCGGAAACGGAGGAAT+CGG | - | chr7_1:9967850-9967869 | None:intergenic | 50.0% | |
| TCTTTCACAACCGGAAACGG+AGG | - | chr7_1:9967856-9967875 | None:intergenic | 50.0% | |
| GCCTCCTGATGAGCATATTC+CGG | + | chr7_1:9967915-9967934 | Msa1009090:CDS | 50.0% | |
| CATGCCGGAATATGCTCATC+AGG | - | chr7_1:9967922-9967941 | None:intergenic | 50.0% | |
| CTGATGAGCATATTCCGGCA+TGG | + | chr7_1:9967920-9967939 | Msa1009090:CDS | 50.0% | |
| ! | GTTTCTGGATCTGGGAATGC+AGG | - | chr7_1:9967949-9967968 | None:intergenic | 50.0% |
| TGCTCAAATGTGGTGGTACG+AGG | - | chr7_1:9968012-9968031 | None:intergenic | 50.0% | |
| TGCTTCGATTGCTGGAGCAA+AGG | - | chr7_1:9968310-9968329 | None:intergenic | 50.0% | |
| CAGTGCATCCTGTGATTCCA+AGG | + | chr7_1:9968335-9968354 | Msa1009090:CDS | 50.0% | |
| AGCATGCAAAGACTTTGCCG+TGG | + | chr7_1:9968466-9968485 | Msa1009090:CDS | 50.0% | |
| TCGTCTTCCATCGCAAACCA+CGG | - | chr7_1:9968486-9968505 | None:intergenic | 50.0% | |
| GTTTGCGATGGAAGACGAGA+AGG | + | chr7_1:9968488-9968507 | Msa1009090:CDS | 50.0% | |
| TGGAAGACGAGAAGGATGAC+AGG | + | chr7_1:9968496-9968515 | Msa1009090:CDS | 50.0% | |
| AGCAATGGCAATGGGAAGAC+TGG | + | chr7_1:9967436-9967455 | Msa1009090:CDS | 50.0% | |
| AACAGCCTAACACCACATGG+AGG | + | chr7_1:9967473-9967492 | Msa1009090:CDS | 50.0% | |
| TTCCTCCTCCATGTGGTGTT+AGG | - | chr7_1:9967481-9967500 | None:intergenic | 50.0% | |
| CACTTTCTTCCTCCTCCATG+TGG | - | chr7_1:9967488-9967507 | None:intergenic | 50.0% | |
| CACATGGAGGAGGAAGAAAG+TGG | + | chr7_1:9967486-9967505 | Msa1009090:CDS | 50.0% | |
| AGCGCAAGTATGCGAGAGTA+AGG | + | chr7_1:9967552-9967571 | Msa1009090:CDS | 50.0% | |
| GCGCAAGTATGCGAGAGTAA+GGG | + | chr7_1:9967553-9967572 | Msa1009090:CDS | 50.0% | |
| ATTTCAGCAGTCGGCACTTG+AGG | + | chr7_1:9967585-9967604 | Msa1009090:CDS | 50.0% | |
| AGAAGATATGGGGTCGATGC+AGG | + | chr7_1:9967720-9967739 | Msa1009090:CDS | 50.0% | |
| GAAGATATGGGGTCGATGCA+GGG | + | chr7_1:9967721-9967740 | Msa1009090:CDS | 50.0% | |
| AAGATATGGGGTCGATGCAG+GGG | + | chr7_1:9967722-9967741 | Msa1009090:CDS | 50.0% | |
| ! | GATCACTGGCTGGAAGATTC+GGG | + | chr7_1:9967766-9967785 | Msa1009090:CDS | 50.0% |
| ACAACCGGAAACGGAGGAAT+CGG | - | chr7_1:9967850-9967869 | None:intergenic | 50.0% | |
| TCTTTCACAACCGGAAACGG+AGG | - | chr7_1:9967856-9967875 | None:intergenic | 50.0% | |
| GCCTCCTGATGAGCATATTC+CGG | + | chr7_1:9967915-9967934 | Msa1009090:CDS | 50.0% | |
| CATGCCGGAATATGCTCATC+AGG | - | chr7_1:9967922-9967941 | None:intergenic | 50.0% | |
| CTGATGAGCATATTCCGGCA+TGG | + | chr7_1:9967920-9967939 | Msa1009090:CDS | 50.0% | |
| ! | GTTTCTGGATCTGGGAATGC+AGG | - | chr7_1:9967949-9967968 | None:intergenic | 50.0% |
| TGCTCAAATGTGGTGGTACG+AGG | - | chr7_1:9968012-9968031 | None:intergenic | 50.0% | |
| TGCTTCGATTGCTGGAGCAA+AGG | - | chr7_1:9968310-9968329 | None:intergenic | 50.0% | |
| CAGTGCATCCTGTGATTCCA+AGG | + | chr7_1:9968335-9968354 | Msa1009090:CDS | 50.0% | |
| AGCATGCAAAGACTTTGCCG+TGG | + | chr7_1:9968466-9968485 | Msa1009090:CDS | 50.0% | |
| TCGTCTTCCATCGCAAACCA+CGG | - | chr7_1:9968486-9968505 | None:intergenic | 50.0% | |
| GTTTGCGATGGAAGACGAGA+AGG | + | chr7_1:9968488-9968507 | Msa1009090:CDS | 50.0% | |
| TGGAAGACGAGAAGGATGAC+AGG | + | chr7_1:9968496-9968515 | Msa1009090:CDS | 50.0% | |
| AGCCTAACACCACATGGAGG+AGG | + | chr7_1:9967476-9967495 | Msa1009090:CDS | 55.0% | |
| TGGAGGAGGAAGAAAGTGGG+TGG | + | chr7_1:9967490-9967509 | Msa1009090:CDS | 55.0% | |
| AGGAGGAAGAAAGTGGGTGG+TGG | + | chr7_1:9967493-9967512 | Msa1009090:CDS | 55.0% | |
| ACACCCGATTCCTCCGTTTC+CGG | + | chr7_1:9967843-9967862 | Msa1009090:CDS | 55.0% | |
| CAACCGGAAACGGAGGAATC+GGG | - | chr7_1:9967849-9967868 | None:intergenic | 55.0% | |
| GCCGGAATATGCTCATCAGG+AGG | - | chr7_1:9967919-9967938 | None:intergenic | 55.0% | |
| AACTGCAGGGTCAACCATGG+TGG | - | chr7_1:9968112-9968131 | None:intergenic | 55.0% | |
| AGCAACTGCAGGGTCAACCA+TGG | - | chr7_1:9968115-9968134 | None:intergenic | 55.0% | |
| GGTTGACCCTGCAGTTGCTA+AGG | + | chr7_1:9968116-9968135 | Msa1009090:CDS | 55.0% | |
| ! | GACTTTGCCGTGGTTTGCGA+TGG | + | chr7_1:9968476-9968495 | Msa1009090:CDS | 55.0% |
| AGCCTAACACCACATGGAGG+AGG | + | chr7_1:9967476-9967495 | Msa1009090:CDS | 55.0% | |
| TGGAGGAGGAAGAAAGTGGG+TGG | + | chr7_1:9967490-9967509 | Msa1009090:CDS | 55.0% | |
| AGGAGGAAGAAAGTGGGTGG+TGG | + | chr7_1:9967493-9967512 | Msa1009090:CDS | 55.0% | |
| ACACCCGATTCCTCCGTTTC+CGG | + | chr7_1:9967843-9967862 | Msa1009090:CDS | 55.0% | |
| CAACCGGAAACGGAGGAATC+GGG | - | chr7_1:9967849-9967868 | None:intergenic | 55.0% | |
| GCCGGAATATGCTCATCAGG+AGG | - | chr7_1:9967919-9967938 | None:intergenic | 55.0% | |
| AACTGCAGGGTCAACCATGG+TGG | - | chr7_1:9968112-9968131 | None:intergenic | 55.0% | |
| AGCAACTGCAGGGTCAACCA+TGG | - | chr7_1:9968115-9968134 | None:intergenic | 55.0% | |
| GGTTGACCCTGCAGTTGCTA+AGG | + | chr7_1:9968116-9968135 | Msa1009090:CDS | 55.0% | |
| ! | GACTTTGCCGTGGTTTGCGA+TGG | + | chr7_1:9968476-9968495 | Msa1009090:CDS | 55.0% |
| GGGTCGATGCAGGGGTTTAC+AGG | + | chr7_1:9967730-9967749 | Msa1009090:CDS | 60.0% | |
| GGGAATGCAGGCAACCATGC+CGG | - | chr7_1:9967937-9967956 | None:intergenic | 60.0% | |
| GGGTCGATGCAGGGGTTTAC+AGG | + | chr7_1:9967730-9967749 | Msa1009090:CDS | 60.0% | |
| GGGAATGCAGGCAACCATGC+CGG | - | chr7_1:9967937-9967956 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 9967433 | 9968584 | 9967433 | ID=Msa1009090;Name=Msa1009090 |
| chr7_1 | mRNA | 9967433 | 9968584 | 9967433 | ID=Msa1009090-mRNA-1;Parent=Msa1009090;Name=Msa1009090-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|-1|0|1|-1|1|1|0|383 |
| chr7_1 | exon | 9967433 | 9968584 | 9967433 | ID=Msa1009090-mRNA-1:exon:2788;Parent=Msa1009090-mRNA-1 |
| chr7_1 | CDS | 9967433 | 9968584 | 9967433 | ID=Msa1009090-mRNA-1:cds;Parent=Msa1009090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
