Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1446880 | sp|Q9SYZ9|TAF8_ARATH | 38.547 | 358 | 187 | 9 | 30 | 383 | 25 | 353 | 5.39e-63 | 208 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1446880 | A0A072TXT6 | 97.128 | 383 | 11 | 0 | 1 | 383 | 1 | 383 | 0.0 | 769 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0112690 | Msa1446880 | 0.807667 | 4.520048e-50 | -8.615850e-47 |
| Msa1352280 | Msa1446880 | -0.813942 | 1.982328e-51 | -8.615850e-47 |
| Msa1374470 | Msa1446880 | 0.806953 | 6.402434e-50 | -8.615850e-47 |
| Msa0622170 | Msa1446880 | -0.801336 | 9.447414e-49 | -8.615850e-47 |
| Msa0680660 | Msa1446880 | 0.822017 | 2.965633e-53 | -8.615850e-47 |
| Msa1009090 | Msa1446880 | 0.992155 | 1.279048e-191 | -8.615850e-47 |
| Msa1111870 | Msa1446880 | 0.800289 | 1.545363e-48 | -8.615850e-47 |
| Msa0532990 | Msa1446880 | 0.803408 | 3.536410e-49 | -8.615850e-47 |
| Msa0844490 | Msa1446880 | 0.806759 | 7.038716e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1446880 | MtrunA17_Chr7g0219481 | 97.128 | 383 | 11 | 0 | 1 | 383 | 1 | 383 | 0.0 | 769 |
| Msa1446880 | MtrunA17_Chr1g0204531 | 36.559 | 372 | 191 | 9 | 19 | 383 | 21 | 354 | 2.44e-67 | 216 |
| Msa1446880 | MtrunA17_Chr3g0119651 | 35.754 | 179 | 107 | 2 | 30 | 200 | 41 | 219 | 1.02e-28 | 114 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1446880 | AT4G34340.1 | 38.547 | 358 | 187 | 9 | 30 | 383 | 25 | 353 | 5.48e-64 | 208 |
| Msa1446880 | AT3G02160.1 | 37.275 | 389 | 201 | 12 | 1 | 369 | 17 | 382 | 4.09e-62 | 205 |
| Msa1446880 | AT3G02160.2 | 37.275 | 389 | 201 | 12 | 1 | 369 | 17 | 382 | 4.09e-62 | 205 |
| Msa1446880 | AT5G15570.1 | 33.163 | 392 | 220 | 9 | 1 | 372 | 1 | 370 | 1.54e-57 | 192 |
| Msa1446880 | AT1G31240.1 | 32.075 | 159 | 90 | 5 | 30 | 176 | 25 | 177 | 1.48e-17 | 82.4 |
Find 102 sgRNAs with CRISPR-Local
Find 240 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTAGACTGCAAATAAGTTTC+TGG | 0.241510 | tig0031536:-2510 | None:intergenic |
| CTGTTAATTGCTTCGATTGC+TGG | 0.256193 | tig0031536:-2864 | None:intergenic |
| CATTCAAGGGTTAGAAGATA+TGG | 0.284263 | tig0031536:+2257 | Msa1446880:CDS |
| GGGACTAGAAATAAATTCTT+AGG | 0.286745 | tig0031536:+2960 | Msa1446880:CDS |
| TTTGAGCATGAAAGAGAAAA+TGG | 0.289815 | tig0031536:+2573 | Msa1446880:CDS |
| TGGAAGATTCGGGTGTTGTT+AGG | 0.296812 | tig0031536:+2325 | Msa1446880:CDS |
| TGCAAATAAGTTTCTGGATC+TGG | 0.298107 | tig0031536:-2504 | None:intergenic |
| GGGTCGATGCAGGGGTTTAC+AGG | 0.315837 | tig0031536:+2279 | Msa1446880:CDS |
| TTCCTCCTCCATGTGGTGTT+AGG | 0.324706 | tig0031536:-2027 | None:intergenic |
| TACAACTGAACAAGCTGATC+TGG | 0.339194 | tig0031536:-3110 | None:intergenic |
| TGATCACTGGCTGGAAGATT+CGG | 0.342375 | tig0031536:+2314 | Msa1446880:CDS |
| AGAAGATATGGGGTCGATGC+AGG | 0.364688 | tig0031536:+2269 | Msa1446880:CDS |
| AATTGTTATGCTAATCTTGC+TGG | 0.386896 | tig0031536:+2207 | Msa1446880:CDS |
| AGCGCAAGTATGCGAGAGTA+AGG | 0.398422 | tig0031536:+2101 | Msa1446880:CDS |
| ACCTTTGAAAATTGAGGATA+AGG | 0.400024 | tig0031536:+2728 | Msa1446880:CDS |
| ACAACCGGAAACGGAGGAAT+CGG | 0.405532 | tig0031536:-2396 | None:intergenic |
| TGCTGCACCTTTGAAAATTG+AGG | 0.408083 | tig0031536:+2722 | Msa1446880:CDS |
| ATCTTTGCCTTAGCAACTGC+AGG | 0.412744 | tig0031536:-2672 | None:intergenic |
| GCCTCCTGATGAGCATATTC+CGG | 0.414106 | tig0031536:+2464 | Msa1446880:CDS |
| AAATGAACCTGGTTCAGTAT+TGG | 0.417907 | tig0031536:+2830 | Msa1446880:CDS |
| GATCACTGGCTGGAAGATTC+GGG | 0.423694 | tig0031536:+2315 | Msa1446880:CDS |
| AGCACACGTTCTTTCACAAC+CGG | 0.426319 | tig0031536:-2411 | None:intergenic |
| CGTTCTTTCACAACCGGAAA+CGG | 0.426775 | tig0031536:-2405 | None:intergenic |
| GTTTGTTAATGAGGCTGAAC+CGG | 0.428268 | tig0031536:+2359 | Msa1446880:CDS |
| TTGCAGTCTACTACGGTGAA+TGG | 0.434590 | tig0031536:+2522 | Msa1446880:CDS |
| ATCGGGTGTGCAAACATAAC+CGG | 0.444368 | tig0031536:-2378 | None:intergenic |
| CTCGGTATATTATGAACATT+GGG | 0.445223 | tig0031536:+2175 | Msa1446880:CDS |
| ACACCCGATTCCTCCGTTTC+CGG | 0.449315 | tig0031536:+2392 | Msa1446880:CDS |
| CATGCCGGAATATGCTCATC+AGG | 0.452423 | tig0031536:-2468 | None:intergenic |
| ATTCAAGGGTTAGAAGATAT+GGG | 0.455691 | tig0031536:+2258 | Msa1446880:CDS |
| CTGATCTTCCTTGGAATCAC+AGG | 0.456719 | tig0031536:-2892 | None:intergenic |
| AGCAATGGCAATGGGAAGAC+TGG | 0.457562 | tig0031536:+1985 | Msa1446880:CDS |
| ACATTATTAAAGAATTTAGC+TGG | 0.459746 | tig0031536:-2771 | None:intergenic |
| GGAAGATTCGGGTGTTGTTA+GGG | 0.459880 | tig0031536:+2326 | Msa1446880:CDS |
| AATTGTTCAGTTTGTTAATG+AGG | 0.463759 | tig0031536:+2350 | Msa1446880:CDS |
| GCAAATAAGTTTCTGGATCT+GGG | 0.468046 | tig0031536:-2503 | None:intergenic |
| AAATTCTTAGGAAGGTCAAT+TGG | 0.468574 | tig0031536:+2972 | Msa1446880:CDS |
| TCAAAGGTGCAGCAAGGAAA+GGG | 0.483213 | tig0031536:-2713 | None:intergenic |
| TTCTCTTTCATGCTCAAATG+TGG | 0.493502 | tig0031536:-2568 | None:intergenic |
| ACAGTAGGTTTCTCTTTCAC+AGG | 0.495987 | tig0031536:-2924 | None:intergenic |
| GTTGCTAAGGCAAAGATAGT+AGG | 0.495988 | tig0031536:+2678 | Msa1446880:CDS |
| TTCAAAGGTGCAGCAAGGAA+AGG | 0.498870 | tig0031536:-2714 | None:intergenic |
| ATTAAAGAATTTAGCTGGAG+GGG | 0.500157 | tig0031536:-2766 | None:intergenic |
| GCTCGGTATATTATGAACAT+TGG | 0.501430 | tig0031536:+2174 | Msa1446880:CDS |
| GACTTTGCCGTGGTTTGCGA+TGG | 0.512129 | tig0031536:+3025 | Msa1446880:CDS |
| AGAAGGATGACAGGAAAAGA+AGG | 0.514396 | tig0031536:+3054 | Msa1446880:CDS |
| ACAACTGAACAAGCTGATCT+GGG | 0.515730 | tig0031536:-3109 | None:intergenic |
| GTTTCTGGATCTGGGAATGC+AGG | 0.522357 | tig0031536:-2495 | None:intergenic |
| ATTTGCACAATCTATTGCTA+AGG | 0.522859 | tig0031536:+2071 | Msa1446880:CDS |
| AACTTATTTGCAGTCTACTA+CGG | 0.528437 | tig0031536:+2515 | Msa1446880:CDS |
| CAACCGGAAACGGAGGAATC+GGG | 0.529236 | tig0031536:-2395 | None:intergenic |
| ATTTCAGCAGTCGGCACTTG+AGG | 0.533229 | tig0031536:+2134 | Msa1446880:CDS |
| TTTGAATTCACAGCAGCAGA+TGG | 0.533640 | tig0031536:+2614 | Msa1446880:CDS |
| TCTTTCATGCTCAAATGTGG+TGG | 0.534234 | tig0031536:-2565 | None:intergenic |
| GGTTGACCCTGCAGTTGCTA+AGG | 0.536793 | tig0031536:+2665 | Msa1446880:CDS |
| GAAGATATGGGGTCGATGCA+GGG | 0.539421 | tig0031536:+2270 | Msa1446880:CDS |
| TCTACTACGGTGAATGGAAG+AGG | 0.539817 | tig0031536:+2528 | Msa1446880:CDS |
| GGGAATGCAGGCAACCATGC+CGG | 0.545485 | tig0031536:-2483 | None:intergenic |
| TGCTGCTGTGAATTCAAAAG+AGG | 0.547809 | tig0031536:-2609 | None:intergenic |
| CAGTGCATCCTGTGATTCCA+AGG | 0.552165 | tig0031536:+2884 | Msa1446880:CDS |
| TGCTTCGATTGCTGGAGCAA+AGG | 0.552344 | tig0031536:-2856 | None:intergenic |
| TGGAAGACGAGAAGGATGAC+AGG | 0.552952 | tig0031536:+3045 | Msa1446880:CDS |
| AGGAGGAAGAAAGTGGGTGG+TGG | 0.558907 | tig0031536:+2042 | Msa1446880:CDS |
| CACTTTCTTCCTCCTCCATG+TGG | 0.568483 | tig0031536:-2034 | None:intergenic |
| TATTAAAGAATTTAGCTGGA+GGG | 0.569693 | tig0031536:-2767 | None:intergenic |
| CTGAATATGAGCAATGGCAA+TGG | 0.574328 | tig0031536:+1976 | None:intergenic |
| AATTTAGTTCAAAATGAACC+TGG | 0.577666 | tig0031536:+2819 | Msa1446880:CDS |
| TGAATATGAGCAATGGCAAT+GGG | 0.579503 | tig0031536:+1977 | None:intergenic |
| ATGAAAGAGAAAATGGCAAG+GGG | 0.579675 | tig0031536:+2580 | Msa1446880:CDS |
| TTCAGATATTGATCACTGGC+TGG | 0.579893 | tig0031536:+2305 | Msa1446880:CDS |
| CTAGAAATAAATTCTTAGGA+AGG | 0.582756 | tig0031536:+2964 | Msa1446880:CDS |
| AAGATATGGGGTCGATGCAG+GGG | 0.587409 | tig0031536:+2271 | Msa1446880:CDS |
| GTGCTTCAGATATTGATCAC+TGG | 0.588992 | tig0031536:+2301 | Msa1446880:CDS |
| GAAGGATGACAGGAAAAGAA+GGG | 0.590614 | tig0031536:+3055 | Msa1446880:CDS |
| AAGGTCTCCAATACTGAACC+AGG | 0.595021 | tig0031536:-2837 | None:intergenic |
| TGCTCAAATGTGGTGGTACG+AGG | 0.598822 | tig0031536:-2558 | None:intergenic |
| CACATGGAGGAGGAAGAAAG+TGG | 0.601802 | tig0031536:+2035 | Msa1446880:CDS |
| AGCCTAACACCACATGGAGG+AGG | 0.608643 | tig0031536:+2025 | Msa1446880:CDS |
| GTTTGCGATGGAAGACGAGA+AGG | 0.609541 | tig0031536:+3037 | Msa1446880:CDS |
| CAATGTCTGATGTTACTGCT+CGG | 0.615655 | tig0031536:+2157 | Msa1446880:CDS |
| TCTTTCACAACCGGAAACGG+AGG | 0.621110 | tig0031536:-2402 | None:intergenic |
| CATGAAAGAGAAAATGGCAA+GGG | 0.622571 | tig0031536:+2579 | Msa1446880:CDS |
| CCAACCTTAAAACGTACAGT+AGG | 0.627191 | tig0031536:-2939 | None:intergenic |
| GCGCAAGTATGCGAGAGTAA+GGG | 0.628011 | tig0031536:+2102 | Msa1446880:CDS |
| CTGATGAGCATATTCCGGCA+TGG | 0.628590 | tig0031536:+2469 | Msa1446880:CDS |
| AACAACAGCCTAACACCACA+TGG | 0.631098 | tig0031536:+2019 | Msa1446880:CDS |
| AGCAACTGCAGGGTCAACCA+TGG | 0.649507 | tig0031536:-2661 | None:intergenic |
| TTCAAGGGTTAGAAGATATG+GGG | 0.654625 | tig0031536:+2259 | Msa1446880:CDS |
| CTACTACGGTGAATGGAAGA+GGG | 0.654716 | tig0031536:+2529 | Msa1446880:CDS |
| TCTTTGCCTTAGCAACTGCA+GGG | 0.654727 | tig0031536:-2671 | None:intergenic |
| GCATGAAAGAGAAAATGGCA+AGG | 0.663461 | tig0031536:+2578 | Msa1446880:CDS |
| TTATTAAAGAATTTAGCTGG+AGG | 0.669528 | tig0031536:-2768 | None:intergenic |
| GCCGGAATATGCTCATCAGG+AGG | 0.672120 | tig0031536:-2465 | None:intergenic |
| GAAGTGCTGAATATGAGCAA+TGG | 0.677775 | tig0031536:+1970 | None:intergenic |
| ACATGGAGGAGGAAGAAAGT+GGG | 0.687005 | tig0031536:+2036 | Msa1446880:CDS |
| TCGTCTTCCATCGCAAACCA+CGG | 0.690094 | tig0031536:-3032 | None:intergenic |
| TGGAGGAGGAAGAAAGTGGG+TGG | 0.692123 | tig0031536:+2039 | Msa1446880:CDS |
| AGCATGCAAAGACTTTGCCG+TGG | 0.700393 | tig0031536:+3015 | Msa1446880:CDS |
| AACTGCAGGGTCAACCATGG+TGG | 0.704928 | tig0031536:-2658 | None:intergenic |
| TATGTTTGAGAACTCCACCA+TGG | 0.713816 | tig0031536:+2644 | Msa1446880:CDS |
| TGAAAGAGAAAATGGCAAGG+GGG | 0.750807 | tig0031536:+2581 | Msa1446880:CDS |
| AACAGCCTAACACCACATGG+AGG | 0.752752 | tig0031536:+2022 | Msa1446880:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACATTATTAAAGAATTTAGC+TGG | - | tig0031536:2774-2793 | None:intergenic | 20.0% |
| !! | ACATTATTAAAGAATTTAGC+TGG | - | tig0031536:2774-2793 | None:intergenic | 20.0% |
| !!! | AATGTTTTTGATGTCATTCA+AGG | + | tig0031536:2243-2262 | Msa1446880:CDS | 25.0% |
| !!! | ATGTTTTTGATGTCATTCAA+GGG | + | tig0031536:2244-2263 | Msa1446880:CDS | 25.0% |
| !!! | AATTGTTCAGTTTGTTAATG+AGG | + | tig0031536:2350-2369 | Msa1446880:CDS | 25.0% |
| ! | TATTAAAGAATTTAGCTGGA+GGG | - | tig0031536:2770-2789 | None:intergenic | 25.0% |
| ! | TTATTAAAGAATTTAGCTGG+AGG | - | tig0031536:2771-2790 | None:intergenic | 25.0% |
| !! | TGAACTAAATTTTCTACAAC+TGG | - | tig0031536:2810-2829 | None:intergenic | 25.0% |
| !! | AATTTAGTTCAAAATGAACC+TGG | + | tig0031536:2819-2838 | Msa1446880:CDS | 25.0% |
| ! | CTAGAAATAAATTCTTAGGA+AGG | + | tig0031536:2964-2983 | Msa1446880:CDS | 25.0% |
| !!! | AATGTTTTTGATGTCATTCA+AGG | + | tig0031536:2243-2262 | Msa1446880:CDS | 25.0% |
| !!! | ATGTTTTTGATGTCATTCAA+GGG | + | tig0031536:2244-2263 | Msa1446880:CDS | 25.0% |
| !!! | AATTGTTCAGTTTGTTAATG+AGG | + | tig0031536:2350-2369 | Msa1446880:CDS | 25.0% |
| ! | TATTAAAGAATTTAGCTGGA+GGG | - | tig0031536:2770-2789 | None:intergenic | 25.0% |
| ! | TTATTAAAGAATTTAGCTGG+AGG | - | tig0031536:2771-2790 | None:intergenic | 25.0% |
| !! | TGAACTAAATTTTCTACAAC+TGG | - | tig0031536:2810-2829 | None:intergenic | 25.0% |
| !! | AATTTAGTTCAAAATGAACC+TGG | + | tig0031536:2819-2838 | Msa1446880:CDS | 25.0% |
| ! | CTAGAAATAAATTCTTAGGA+AGG | + | tig0031536:2964-2983 | Msa1446880:CDS | 25.0% |
| ATTTGCACAATCTATTGCTA+AGG | + | tig0031536:2071-2090 | Msa1446880:CDS | 30.0% | |
| CTCGGTATATTATGAACATT+GGG | + | tig0031536:2175-2194 | Msa1446880:CDS | 30.0% | |
| AATTGTTATGCTAATCTTGC+TGG | + | tig0031536:2207-2226 | Msa1446880:CDS | 30.0% | |
| ATTCAAGGGTTAGAAGATAT+GGG | + | tig0031536:2258-2277 | Msa1446880:CDS | 30.0% | |
| AACTTATTTGCAGTCTACTA+CGG | + | tig0031536:2515-2534 | Msa1446880:CDS | 30.0% | |
| TTTGAGCATGAAAGAGAAAA+TGG | + | tig0031536:2573-2592 | Msa1446880:CDS | 30.0% | |
| ! | ACCTTTGAAAATTGAGGATA+AGG | + | tig0031536:2728-2747 | Msa1446880:CDS | 30.0% |
| ! | TCCTTATCCTCAATTTTCAA+AGG | - | tig0031536:2732-2751 | None:intergenic | 30.0% |
| ATTAAAGAATTTAGCTGGAG+GGG | - | tig0031536:2769-2788 | None:intergenic | 30.0% | |
| ! | AAATTTTGTCTGATCTTCCT+TGG | - | tig0031536:2904-2923 | None:intergenic | 30.0% |
| GGGACTAGAAATAAATTCTT+AGG | + | tig0031536:2960-2979 | Msa1446880:CDS | 30.0% | |
| AAATTCTTAGGAAGGTCAAT+TGG | + | tig0031536:2972-2991 | Msa1446880:CDS | 30.0% | |
| ! | AGATTCCCTCAAAATTTTCT+CGG | - | tig0031536:3081-3100 | None:intergenic | 30.0% |
| !! | GAAAATTTTGAGGGAATCTT+TGG | + | tig0031536:3082-3101 | Msa1446880:CDS | 30.0% |
| ATTTGCACAATCTATTGCTA+AGG | + | tig0031536:2071-2090 | Msa1446880:CDS | 30.0% | |
| CTCGGTATATTATGAACATT+GGG | + | tig0031536:2175-2194 | Msa1446880:CDS | 30.0% | |
| AATTGTTATGCTAATCTTGC+TGG | + | tig0031536:2207-2226 | Msa1446880:CDS | 30.0% | |
| ATTCAAGGGTTAGAAGATAT+GGG | + | tig0031536:2258-2277 | Msa1446880:CDS | 30.0% | |
| AACTTATTTGCAGTCTACTA+CGG | + | tig0031536:2515-2534 | Msa1446880:CDS | 30.0% | |
| TTTGAGCATGAAAGAGAAAA+TGG | + | tig0031536:2573-2592 | Msa1446880:CDS | 30.0% | |
| ! | ACCTTTGAAAATTGAGGATA+AGG | + | tig0031536:2728-2747 | Msa1446880:CDS | 30.0% |
| ! | TCCTTATCCTCAATTTTCAA+AGG | - | tig0031536:2732-2751 | None:intergenic | 30.0% |
| ATTAAAGAATTTAGCTGGAG+GGG | - | tig0031536:2769-2788 | None:intergenic | 30.0% | |
| ! | AAATTTTGTCTGATCTTCCT+TGG | - | tig0031536:2904-2923 | None:intergenic | 30.0% |
| GGGACTAGAAATAAATTCTT+AGG | + | tig0031536:2960-2979 | Msa1446880:CDS | 30.0% | |
| AAATTCTTAGGAAGGTCAAT+TGG | + | tig0031536:2972-2991 | Msa1446880:CDS | 30.0% | |
| ! | AGATTCCCTCAAAATTTTCT+CGG | - | tig0031536:3081-3100 | None:intergenic | 30.0% |
| !! | GAAAATTTTGAGGGAATCTT+TGG | + | tig0031536:3082-3101 | Msa1446880:CDS | 30.0% |
| !! | TTTTCAAGGATTTCAGCAGT+CGG | + | tig0031536:2125-2144 | Msa1446880:CDS | 35.0% |
| GCTCGGTATATTATGAACAT+TGG | + | tig0031536:2174-2193 | Msa1446880:CDS | 35.0% | |
| CATTCAAGGGTTAGAAGATA+TGG | + | tig0031536:2257-2276 | Msa1446880:CDS | 35.0% | |
| TTCAAGGGTTAGAAGATATG+GGG | + | tig0031536:2259-2278 | Msa1446880:CDS | 35.0% | |
| TCTCCTCTTTGCAAAAAACT+GGG | - | tig0031536:2441-2460 | None:intergenic | 35.0% | |
| TTCTCCTCTTTGCAAAAAAC+TGG | - | tig0031536:2442-2461 | None:intergenic | 35.0% | |
| ! | GCAAATAAGTTTCTGGATCT+GGG | - | tig0031536:2506-2525 | None:intergenic | 35.0% |
| ! | TGCAAATAAGTTTCTGGATC+TGG | - | tig0031536:2507-2526 | None:intergenic | 35.0% |
| GTAGACTGCAAATAAGTTTC+TGG | - | tig0031536:2513-2532 | None:intergenic | 35.0% | |
| TTCTCTTTCATGCTCAAATG+TGG | - | tig0031536:2571-2590 | None:intergenic | 35.0% | |
| CATGAAAGAGAAAATGGCAA+GGG | + | tig0031536:2579-2598 | Msa1446880:CDS | 35.0% | |
| ATGAAAGAGAAAATGGCAAG+GGG | + | tig0031536:2580-2599 | Msa1446880:CDS | 35.0% | |
| AAATGAACCTGGTTCAGTAT+TGG | + | tig0031536:2830-2849 | Msa1446880:CDS | 35.0% | |
| ! | GAAACCTACTGTACGTTTTA+AGG | + | tig0031536:2935-2954 | Msa1446880:CDS | 35.0% |
| !!! | CTACTGTACGTTTTAAGGTT+GGG | + | tig0031536:2940-2959 | Msa1446880:CDS | 35.0% |
| TGGTTTGATTCCACAAAAAG+AGG | + | tig0031536:2992-3011 | Msa1446880:CDS | 35.0% | |
| !! | TTTTCAAGGATTTCAGCAGT+CGG | + | tig0031536:2125-2144 | Msa1446880:CDS | 35.0% |
| GCTCGGTATATTATGAACAT+TGG | + | tig0031536:2174-2193 | Msa1446880:CDS | 35.0% | |
| CATTCAAGGGTTAGAAGATA+TGG | + | tig0031536:2257-2276 | Msa1446880:CDS | 35.0% | |
| TTCAAGGGTTAGAAGATATG+GGG | + | tig0031536:2259-2278 | Msa1446880:CDS | 35.0% | |
| TCTCCTCTTTGCAAAAAACT+GGG | - | tig0031536:2441-2460 | None:intergenic | 35.0% | |
| TTCTCCTCTTTGCAAAAAAC+TGG | - | tig0031536:2442-2461 | None:intergenic | 35.0% | |
| ! | GCAAATAAGTTTCTGGATCT+GGG | - | tig0031536:2506-2525 | None:intergenic | 35.0% |
| ! | TGCAAATAAGTTTCTGGATC+TGG | - | tig0031536:2507-2526 | None:intergenic | 35.0% |
| GTAGACTGCAAATAAGTTTC+TGG | - | tig0031536:2513-2532 | None:intergenic | 35.0% | |
| TTCTCTTTCATGCTCAAATG+TGG | - | tig0031536:2571-2590 | None:intergenic | 35.0% | |
| CATGAAAGAGAAAATGGCAA+GGG | + | tig0031536:2579-2598 | Msa1446880:CDS | 35.0% | |
| ATGAAAGAGAAAATGGCAAG+GGG | + | tig0031536:2580-2599 | Msa1446880:CDS | 35.0% | |
| AAATGAACCTGGTTCAGTAT+TGG | + | tig0031536:2830-2849 | Msa1446880:CDS | 35.0% | |
| ! | GAAACCTACTGTACGTTTTA+AGG | + | tig0031536:2935-2954 | Msa1446880:CDS | 35.0% |
| !!! | CTACTGTACGTTTTAAGGTT+GGG | + | tig0031536:2940-2959 | Msa1446880:CDS | 35.0% |
| TGGTTTGATTCCACAAAAAG+AGG | + | tig0031536:2992-3011 | Msa1446880:CDS | 35.0% | |
| CAATGTCTGATGTTACTGCT+CGG | + | tig0031536:2157-2176 | Msa1446880:CDS | 40.0% | |
| GTGCTTCAGATATTGATCAC+TGG | + | tig0031536:2301-2320 | Msa1446880:CDS | 40.0% | |
| TTCAGATATTGATCACTGGC+TGG | + | tig0031536:2305-2324 | Msa1446880:CDS | 40.0% | |
| ! | GTTTGTTAATGAGGCTGAAC+CGG | + | tig0031536:2359-2378 | Msa1446880:CDS | 40.0% |
| TCTTTCATGCTCAAATGTGG+TGG | - | tig0031536:2568-2587 | None:intergenic | 40.0% | |
| GCATGAAAGAGAAAATGGCA+AGG | + | tig0031536:2578-2597 | Msa1446880:CDS | 40.0% | |
| TGAAAGAGAAAATGGCAAGG+GGG | + | tig0031536:2581-2600 | Msa1446880:CDS | 40.0% | |
| TGCTGCTGTGAATTCAAAAG+AGG | - | tig0031536:2612-2631 | None:intergenic | 40.0% | |
| TTTGAATTCACAGCAGCAGA+TGG | + | tig0031536:2614-2633 | Msa1446880:CDS | 40.0% | |
| TATGTTTGAGAACTCCACCA+TGG | + | tig0031536:2644-2663 | Msa1446880:CDS | 40.0% | |
| GTTGCTAAGGCAAAGATAGT+AGG | + | tig0031536:2678-2697 | Msa1446880:CDS | 40.0% | |
| !! | CAATTTTCAAAGGTGCAGCA+AGG | - | tig0031536:2722-2741 | None:intergenic | 40.0% |
| ! | TGCTGCACCTTTGAAAATTG+AGG | + | tig0031536:2722-2741 | Msa1446880:CDS | 40.0% |
| CTGTTAATTGCTTCGATTGC+TGG | - | tig0031536:2867-2886 | None:intergenic | 40.0% | |
| ACAGTAGGTTTCTCTTTCAC+AGG | - | tig0031536:2927-2946 | None:intergenic | 40.0% | |
| CCAACCTTAAAACGTACAGT+AGG | - | tig0031536:2942-2961 | None:intergenic | 40.0% | |
| !!! | CCTACTGTACGTTTTAAGGT+TGG | + | tig0031536:2939-2958 | Msa1446880:CDS | 40.0% |
| ! | TTTGCATGCTCCTCTTTTTG+TGG | - | tig0031536:3005-3024 | None:intergenic | 40.0% |
| AGAAGGATGACAGGAAAAGA+AGG | + | tig0031536:3054-3073 | Msa1446880:CDS | 40.0% | |
| GAAGGATGACAGGAAAAGAA+GGG | + | tig0031536:3055-3074 | Msa1446880:CDS | 40.0% | |
| ! | AAGGGCCGAGAAAATTTTGA+GGG | + | tig0031536:3073-3092 | Msa1446880:CDS | 40.0% |
| ACAACTGAACAAGCTGATCT+GGG | - | tig0031536:3112-3131 | None:intergenic | 40.0% | |
| TACAACTGAACAAGCTGATC+TGG | - | tig0031536:3113-3132 | None:intergenic | 40.0% | |
| CAATGTCTGATGTTACTGCT+CGG | + | tig0031536:2157-2176 | Msa1446880:CDS | 40.0% | |
| GTGCTTCAGATATTGATCAC+TGG | + | tig0031536:2301-2320 | Msa1446880:CDS | 40.0% | |
| TTCAGATATTGATCACTGGC+TGG | + | tig0031536:2305-2324 | Msa1446880:CDS | 40.0% | |
| ! | GTTTGTTAATGAGGCTGAAC+CGG | + | tig0031536:2359-2378 | Msa1446880:CDS | 40.0% |
| TCTTTCATGCTCAAATGTGG+TGG | - | tig0031536:2568-2587 | None:intergenic | 40.0% | |
| GCATGAAAGAGAAAATGGCA+AGG | + | tig0031536:2578-2597 | Msa1446880:CDS | 40.0% | |
| TGAAAGAGAAAATGGCAAGG+GGG | + | tig0031536:2581-2600 | Msa1446880:CDS | 40.0% | |
| TGCTGCTGTGAATTCAAAAG+AGG | - | tig0031536:2612-2631 | None:intergenic | 40.0% | |
| TTTGAATTCACAGCAGCAGA+TGG | + | tig0031536:2614-2633 | Msa1446880:CDS | 40.0% | |
| TATGTTTGAGAACTCCACCA+TGG | + | tig0031536:2644-2663 | Msa1446880:CDS | 40.0% | |
| GTTGCTAAGGCAAAGATAGT+AGG | + | tig0031536:2678-2697 | Msa1446880:CDS | 40.0% | |
| !! | CAATTTTCAAAGGTGCAGCA+AGG | - | tig0031536:2722-2741 | None:intergenic | 40.0% |
| ! | TGCTGCACCTTTGAAAATTG+AGG | + | tig0031536:2722-2741 | Msa1446880:CDS | 40.0% |
| CTGTTAATTGCTTCGATTGC+TGG | - | tig0031536:2867-2886 | None:intergenic | 40.0% | |
| ACAGTAGGTTTCTCTTTCAC+AGG | - | tig0031536:2927-2946 | None:intergenic | 40.0% | |
| CCAACCTTAAAACGTACAGT+AGG | - | tig0031536:2942-2961 | None:intergenic | 40.0% | |
| !!! | CCTACTGTACGTTTTAAGGT+TGG | + | tig0031536:2939-2958 | Msa1446880:CDS | 40.0% |
| ! | TTTGCATGCTCCTCTTTTTG+TGG | - | tig0031536:3005-3024 | None:intergenic | 40.0% |
| AGAAGGATGACAGGAAAAGA+AGG | + | tig0031536:3054-3073 | Msa1446880:CDS | 40.0% | |
| GAAGGATGACAGGAAAAGAA+GGG | + | tig0031536:3055-3074 | Msa1446880:CDS | 40.0% | |
| ! | AAGGGCCGAGAAAATTTTGA+GGG | + | tig0031536:3073-3092 | Msa1446880:CDS | 40.0% |
| ACAACTGAACAAGCTGATCT+GGG | - | tig0031536:3112-3131 | None:intergenic | 40.0% | |
| TACAACTGAACAAGCTGATC+TGG | - | tig0031536:3113-3132 | None:intergenic | 40.0% | |
| AACAACAGCCTAACACCACA+TGG | + | tig0031536:2019-2038 | Msa1446880:CDS | 45.0% | |
| ACATGGAGGAGGAAGAAAGT+GGG | + | tig0031536:2036-2055 | Msa1446880:CDS | 45.0% | |
| ! | TGCGAGAGTAAGGGTTTTCA+AGG | + | tig0031536:2111-2130 | Msa1446880:CDS | 45.0% |
| ! | TGATCACTGGCTGGAAGATT+CGG | + | tig0031536:2314-2333 | Msa1446880:CDS | 45.0% |
| !! | TGGAAGATTCGGGTGTTGTT+AGG | + | tig0031536:2325-2344 | Msa1446880:CDS | 45.0% |
| !! | GGAAGATTCGGGTGTTGTTA+GGG | + | tig0031536:2326-2345 | Msa1446880:CDS | 45.0% |
| ATCGGGTGTGCAAACATAAC+CGG | - | tig0031536:2381-2400 | None:intergenic | 45.0% | |
| CGTTCTTTCACAACCGGAAA+CGG | - | tig0031536:2408-2427 | None:intergenic | 45.0% | |
| AGCACACGTTCTTTCACAAC+CGG | - | tig0031536:2414-2433 | None:intergenic | 45.0% | |
| CCTCTTTGCAAAAAACTGGG+AGG | - | tig0031536:2438-2457 | None:intergenic | 45.0% | |
| !!! | CCTCCCAGTTTTTTGCAAAG+AGG | + | tig0031536:2435-2454 | Msa1446880:CDS | 45.0% |
| TTGCAGTCTACTACGGTGAA+TGG | + | tig0031536:2522-2541 | Msa1446880:CDS | 45.0% | |
| TCTACTACGGTGAATGGAAG+AGG | + | tig0031536:2528-2547 | Msa1446880:CDS | 45.0% | |
| CTACTACGGTGAATGGAAGA+GGG | + | tig0031536:2529-2548 | Msa1446880:CDS | 45.0% | |
| TCTTTGCCTTAGCAACTGCA+GGG | - | tig0031536:2674-2693 | None:intergenic | 45.0% | |
| ATCTTTGCCTTAGCAACTGC+AGG | - | tig0031536:2675-2694 | None:intergenic | 45.0% | |
| ! | TCAAAGGTGCAGCAAGGAAA+GGG | - | tig0031536:2716-2735 | None:intergenic | 45.0% |
| ! | TTCAAAGGTGCAGCAAGGAA+AGG | - | tig0031536:2717-2736 | None:intergenic | 45.0% |
| AAGGTCTCCAATACTGAACC+AGG | - | tig0031536:2840-2859 | None:intergenic | 45.0% | |
| CTGATCTTCCTTGGAATCAC+AGG | - | tig0031536:2895-2914 | None:intergenic | 45.0% | |
| ! | GAAGGGCCGAGAAAATTTTG+AGG | + | tig0031536:3072-3091 | Msa1446880:CDS | 45.0% |
| AACAACAGCCTAACACCACA+TGG | + | tig0031536:2019-2038 | Msa1446880:CDS | 45.0% | |
| ACATGGAGGAGGAAGAAAGT+GGG | + | tig0031536:2036-2055 | Msa1446880:CDS | 45.0% | |
| ! | TGCGAGAGTAAGGGTTTTCA+AGG | + | tig0031536:2111-2130 | Msa1446880:CDS | 45.0% |
| ! | TGATCACTGGCTGGAAGATT+CGG | + | tig0031536:2314-2333 | Msa1446880:CDS | 45.0% |
| !! | TGGAAGATTCGGGTGTTGTT+AGG | + | tig0031536:2325-2344 | Msa1446880:CDS | 45.0% |
| !! | GGAAGATTCGGGTGTTGTTA+GGG | + | tig0031536:2326-2345 | Msa1446880:CDS | 45.0% |
| ATCGGGTGTGCAAACATAAC+CGG | - | tig0031536:2381-2400 | None:intergenic | 45.0% | |
| CGTTCTTTCACAACCGGAAA+CGG | - | tig0031536:2408-2427 | None:intergenic | 45.0% | |
| AGCACACGTTCTTTCACAAC+CGG | - | tig0031536:2414-2433 | None:intergenic | 45.0% | |
| CCTCTTTGCAAAAAACTGGG+AGG | - | tig0031536:2438-2457 | None:intergenic | 45.0% | |
| !!! | CCTCCCAGTTTTTTGCAAAG+AGG | + | tig0031536:2435-2454 | Msa1446880:CDS | 45.0% |
| TTGCAGTCTACTACGGTGAA+TGG | + | tig0031536:2522-2541 | Msa1446880:CDS | 45.0% | |
| TCTACTACGGTGAATGGAAG+AGG | + | tig0031536:2528-2547 | Msa1446880:CDS | 45.0% | |
| CTACTACGGTGAATGGAAGA+GGG | + | tig0031536:2529-2548 | Msa1446880:CDS | 45.0% | |
| TCTTTGCCTTAGCAACTGCA+GGG | - | tig0031536:2674-2693 | None:intergenic | 45.0% | |
| ATCTTTGCCTTAGCAACTGC+AGG | - | tig0031536:2675-2694 | None:intergenic | 45.0% | |
| ! | TCAAAGGTGCAGCAAGGAAA+GGG | - | tig0031536:2716-2735 | None:intergenic | 45.0% |
| ! | TTCAAAGGTGCAGCAAGGAA+AGG | - | tig0031536:2717-2736 | None:intergenic | 45.0% |
| AAGGTCTCCAATACTGAACC+AGG | - | tig0031536:2840-2859 | None:intergenic | 45.0% | |
| CTGATCTTCCTTGGAATCAC+AGG | - | tig0031536:2895-2914 | None:intergenic | 45.0% | |
| ! | GAAGGGCCGAGAAAATTTTG+AGG | + | tig0031536:3072-3091 | Msa1446880:CDS | 45.0% |
| AGCAATGGCAATGGGAAGAC+TGG | + | tig0031536:1985-2004 | Msa1446880:CDS | 50.0% | |
| AACAGCCTAACACCACATGG+AGG | + | tig0031536:2022-2041 | Msa1446880:CDS | 50.0% | |
| TTCCTCCTCCATGTGGTGTT+AGG | - | tig0031536:2030-2049 | None:intergenic | 50.0% | |
| CACTTTCTTCCTCCTCCATG+TGG | - | tig0031536:2037-2056 | None:intergenic | 50.0% | |
| CACATGGAGGAGGAAGAAAG+TGG | + | tig0031536:2035-2054 | Msa1446880:CDS | 50.0% | |
| AGCGCAAGTATGCGAGAGTA+AGG | + | tig0031536:2101-2120 | Msa1446880:CDS | 50.0% | |
| GCGCAAGTATGCGAGAGTAA+GGG | + | tig0031536:2102-2121 | Msa1446880:CDS | 50.0% | |
| ATTTCAGCAGTCGGCACTTG+AGG | + | tig0031536:2134-2153 | Msa1446880:CDS | 50.0% | |
| AGAAGATATGGGGTCGATGC+AGG | + | tig0031536:2269-2288 | Msa1446880:CDS | 50.0% | |
| GAAGATATGGGGTCGATGCA+GGG | + | tig0031536:2270-2289 | Msa1446880:CDS | 50.0% | |
| AAGATATGGGGTCGATGCAG+GGG | + | tig0031536:2271-2290 | Msa1446880:CDS | 50.0% | |
| ! | GATCACTGGCTGGAAGATTC+GGG | + | tig0031536:2315-2334 | Msa1446880:CDS | 50.0% |
| ACAACCGGAAACGGAGGAAT+CGG | - | tig0031536:2399-2418 | None:intergenic | 50.0% | |
| TCTTTCACAACCGGAAACGG+AGG | - | tig0031536:2405-2424 | None:intergenic | 50.0% | |
| GCCTCCTGATGAGCATATTC+CGG | + | tig0031536:2464-2483 | Msa1446880:CDS | 50.0% | |
| CATGCCGGAATATGCTCATC+AGG | - | tig0031536:2471-2490 | None:intergenic | 50.0% | |
| CTGATGAGCATATTCCGGCA+TGG | + | tig0031536:2469-2488 | Msa1446880:CDS | 50.0% | |
| ! | GTTTCTGGATCTGGGAATGC+AGG | - | tig0031536:2498-2517 | None:intergenic | 50.0% |
| TGCTCAAATGTGGTGGTACG+AGG | - | tig0031536:2561-2580 | None:intergenic | 50.0% | |
| TGCTTCGATTGCTGGAGCAA+AGG | - | tig0031536:2859-2878 | None:intergenic | 50.0% | |
| CAGTGCATCCTGTGATTCCA+AGG | + | tig0031536:2884-2903 | Msa1446880:CDS | 50.0% | |
| AGCATGCAAAGACTTTGCCG+TGG | + | tig0031536:3015-3034 | Msa1446880:CDS | 50.0% | |
| TCGTCTTCCATCGCAAACCA+CGG | - | tig0031536:3035-3054 | None:intergenic | 50.0% | |
| GTTTGCGATGGAAGACGAGA+AGG | + | tig0031536:3037-3056 | Msa1446880:CDS | 50.0% | |
| TGGAAGACGAGAAGGATGAC+AGG | + | tig0031536:3045-3064 | Msa1446880:CDS | 50.0% | |
| AGCAATGGCAATGGGAAGAC+TGG | + | tig0031536:1985-2004 | Msa1446880:CDS | 50.0% | |
| AACAGCCTAACACCACATGG+AGG | + | tig0031536:2022-2041 | Msa1446880:CDS | 50.0% | |
| TTCCTCCTCCATGTGGTGTT+AGG | - | tig0031536:2030-2049 | None:intergenic | 50.0% | |
| CACTTTCTTCCTCCTCCATG+TGG | - | tig0031536:2037-2056 | None:intergenic | 50.0% | |
| CACATGGAGGAGGAAGAAAG+TGG | + | tig0031536:2035-2054 | Msa1446880:CDS | 50.0% | |
| AGCGCAAGTATGCGAGAGTA+AGG | + | tig0031536:2101-2120 | Msa1446880:CDS | 50.0% | |
| GCGCAAGTATGCGAGAGTAA+GGG | + | tig0031536:2102-2121 | Msa1446880:CDS | 50.0% | |
| ATTTCAGCAGTCGGCACTTG+AGG | + | tig0031536:2134-2153 | Msa1446880:CDS | 50.0% | |
| AGAAGATATGGGGTCGATGC+AGG | + | tig0031536:2269-2288 | Msa1446880:CDS | 50.0% | |
| GAAGATATGGGGTCGATGCA+GGG | + | tig0031536:2270-2289 | Msa1446880:CDS | 50.0% | |
| AAGATATGGGGTCGATGCAG+GGG | + | tig0031536:2271-2290 | Msa1446880:CDS | 50.0% | |
| ! | GATCACTGGCTGGAAGATTC+GGG | + | tig0031536:2315-2334 | Msa1446880:CDS | 50.0% |
| ACAACCGGAAACGGAGGAAT+CGG | - | tig0031536:2399-2418 | None:intergenic | 50.0% | |
| TCTTTCACAACCGGAAACGG+AGG | - | tig0031536:2405-2424 | None:intergenic | 50.0% | |
| GCCTCCTGATGAGCATATTC+CGG | + | tig0031536:2464-2483 | Msa1446880:CDS | 50.0% | |
| CATGCCGGAATATGCTCATC+AGG | - | tig0031536:2471-2490 | None:intergenic | 50.0% | |
| CTGATGAGCATATTCCGGCA+TGG | + | tig0031536:2469-2488 | Msa1446880:CDS | 50.0% | |
| ! | GTTTCTGGATCTGGGAATGC+AGG | - | tig0031536:2498-2517 | None:intergenic | 50.0% |
| TGCTCAAATGTGGTGGTACG+AGG | - | tig0031536:2561-2580 | None:intergenic | 50.0% | |
| TGCTTCGATTGCTGGAGCAA+AGG | - | tig0031536:2859-2878 | None:intergenic | 50.0% | |
| CAGTGCATCCTGTGATTCCA+AGG | + | tig0031536:2884-2903 | Msa1446880:CDS | 50.0% | |
| AGCATGCAAAGACTTTGCCG+TGG | + | tig0031536:3015-3034 | Msa1446880:CDS | 50.0% | |
| TCGTCTTCCATCGCAAACCA+CGG | - | tig0031536:3035-3054 | None:intergenic | 50.0% | |
| GTTTGCGATGGAAGACGAGA+AGG | + | tig0031536:3037-3056 | Msa1446880:CDS | 50.0% | |
| TGGAAGACGAGAAGGATGAC+AGG | + | tig0031536:3045-3064 | Msa1446880:CDS | 50.0% | |
| AGCCTAACACCACATGGAGG+AGG | + | tig0031536:2025-2044 | Msa1446880:CDS | 55.0% | |
| TGGAGGAGGAAGAAAGTGGG+TGG | + | tig0031536:2039-2058 | Msa1446880:CDS | 55.0% | |
| AGGAGGAAGAAAGTGGGTGG+TGG | + | tig0031536:2042-2061 | Msa1446880:CDS | 55.0% | |
| ACACCCGATTCCTCCGTTTC+CGG | + | tig0031536:2392-2411 | Msa1446880:CDS | 55.0% | |
| CAACCGGAAACGGAGGAATC+GGG | - | tig0031536:2398-2417 | None:intergenic | 55.0% | |
| GCCGGAATATGCTCATCAGG+AGG | - | tig0031536:2468-2487 | None:intergenic | 55.0% | |
| AACTGCAGGGTCAACCATGG+TGG | - | tig0031536:2661-2680 | None:intergenic | 55.0% | |
| AGCAACTGCAGGGTCAACCA+TGG | - | tig0031536:2664-2683 | None:intergenic | 55.0% | |
| GGTTGACCCTGCAGTTGCTA+AGG | + | tig0031536:2665-2684 | Msa1446880:CDS | 55.0% | |
| ! | GACTTTGCCGTGGTTTGCGA+TGG | + | tig0031536:3025-3044 | Msa1446880:CDS | 55.0% |
| AGCCTAACACCACATGGAGG+AGG | + | tig0031536:2025-2044 | Msa1446880:CDS | 55.0% | |
| TGGAGGAGGAAGAAAGTGGG+TGG | + | tig0031536:2039-2058 | Msa1446880:CDS | 55.0% | |
| AGGAGGAAGAAAGTGGGTGG+TGG | + | tig0031536:2042-2061 | Msa1446880:CDS | 55.0% | |
| ACACCCGATTCCTCCGTTTC+CGG | + | tig0031536:2392-2411 | Msa1446880:CDS | 55.0% | |
| CAACCGGAAACGGAGGAATC+GGG | - | tig0031536:2398-2417 | None:intergenic | 55.0% | |
| GCCGGAATATGCTCATCAGG+AGG | - | tig0031536:2468-2487 | None:intergenic | 55.0% | |
| AACTGCAGGGTCAACCATGG+TGG | - | tig0031536:2661-2680 | None:intergenic | 55.0% | |
| AGCAACTGCAGGGTCAACCA+TGG | - | tig0031536:2664-2683 | None:intergenic | 55.0% | |
| GGTTGACCCTGCAGTTGCTA+AGG | + | tig0031536:2665-2684 | Msa1446880:CDS | 55.0% | |
| ! | GACTTTGCCGTGGTTTGCGA+TGG | + | tig0031536:3025-3044 | Msa1446880:CDS | 55.0% |
| GGGTCGATGCAGGGGTTTAC+AGG | + | tig0031536:2279-2298 | Msa1446880:CDS | 60.0% | |
| GGGAATGCAGGCAACCATGC+CGG | - | tig0031536:2486-2505 | None:intergenic | 60.0% | |
| GGGTCGATGCAGGGGTTTAC+AGG | + | tig0031536:2279-2298 | Msa1446880:CDS | 60.0% | |
| GGGAATGCAGGCAACCATGC+CGG | - | tig0031536:2486-2505 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0031536 | gene | 1982 | 3133 | 1982 | ID=Msa1446880;Name=Msa1446880 |
| tig0031536 | mRNA | 1982 | 3133 | 1982 | ID=Msa1446880-mRNA-1;Parent=Msa1446880;Name=Msa1446880-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|-1|0|1|-1|1|1|0|383 |
| tig0031536 | exon | 1982 | 3133 | 1982 | ID=Msa1446880-mRNA-1:exon:15610;Parent=Msa1446880-mRNA-1 |
| tig0031536 | CDS | 1982 | 3133 | 1982 | ID=Msa1446880-mRNA-1:cds;Parent=Msa1446880-mRNA-1 |
| Gene Sequence |
| Protein sequence |
