Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1011580 | XP_024627046.1 | 81.908 | 304 | 45 | 1 | 1 | 304 | 1 | 294 | 1.13e-171 | 506 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1011580 | sp|Q84K34|SIL10_ARATH | 35.081 | 248 | 147 | 3 | 4 | 247 | 103 | 340 | 7.77e-42 | 159 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1011580 | G7KWT8 | 81.908 | 304 | 45 | 1 | 1 | 304 | 1 | 294 | 5.40e-172 | 506 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0058230 | Msa1011580 | 0.813612 | 2.343939e-51 | -8.615850e-47 |
| Msa0058370 | Msa1011580 | 0.813516 | 2.460380e-51 | -8.615850e-47 |
| Msa1011570 | Msa1011580 | 0.854384 | 1.275573e-61 | -8.615850e-47 |
| Msa1011580 | Msa1142690 | 0.814646 | 1.385719e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1011580 | MtrunA17_Chr7g0223111 | 85.467 | 289 | 31 | 2 | 1 | 288 | 27 | 305 | 2.15e-175 | 506 |
| Msa1011580 | MtrunA17_Chr5g0428191 | 76.325 | 283 | 57 | 1 | 1 | 283 | 1 | 273 | 1.94e-151 | 444 |
| Msa1011580 | MtrunA17_Chr5g0433661 | 71.378 | 283 | 68 | 2 | 3 | 282 | 37 | 309 | 2.86e-135 | 404 |
| Msa1011580 | MtrunA17_Chr1g0169371 | 75.391 | 256 | 52 | 2 | 28 | 283 | 3 | 247 | 6.44e-129 | 385 |
| Msa1011580 | MtrunA17_Chr5g0433731 | 72.015 | 268 | 60 | 4 | 26 | 289 | 8 | 264 | 2.55e-123 | 369 |
| Msa1011580 | MtrunA17_Chr7g0259431 | 71.984 | 257 | 62 | 1 | 26 | 282 | 8 | 254 | 1.39e-122 | 369 |
| Msa1011580 | MtrunA17_Chr5g0433631 | 67.845 | 283 | 78 | 2 | 4 | 283 | 26 | 298 | 3.11e-122 | 370 |
| Msa1011580 | MtrunA17_Chr5g0424971 | 64.261 | 291 | 86 | 4 | 4 | 288 | 11 | 289 | 4.98e-122 | 368 |
| Msa1011580 | MtrunA17_Chr5g0433531 | 60.180 | 334 | 111 | 5 | 1 | 329 | 1 | 317 | 1.87e-121 | 367 |
| Msa1011580 | MtrunA17_Chr5g0433721 | 77.021 | 235 | 44 | 1 | 49 | 283 | 2 | 226 | 5.54e-120 | 361 |
| Msa1011580 | MtrunA17_Chr5g0433411 | 64.437 | 284 | 87 | 3 | 4 | 283 | 26 | 299 | 8.04e-117 | 355 |
| Msa1011580 | MtrunA17_Chr2g0298951 | 58.804 | 301 | 101 | 3 | 26 | 313 | 8 | 298 | 7.21e-111 | 339 |
| Msa1011580 | MtrunA17_Chr5g0433521 | 66.923 | 260 | 73 | 2 | 27 | 283 | 23 | 272 | 1.24e-109 | 336 |
| Msa1011580 | MtrunA17_Chr5g0433541 | 70.168 | 238 | 61 | 1 | 1 | 238 | 1 | 228 | 1.19e-106 | 325 |
| Msa1011580 | MtrunA17_Chr5g0433551 | 70.168 | 238 | 61 | 1 | 1 | 238 | 1 | 228 | 1.19e-106 | 325 |
| Msa1011580 | MtrunA17_Chr2g0298941 | 63.514 | 222 | 66 | 3 | 70 | 286 | 1 | 212 | 1.50e-86 | 273 |
| Msa1011580 | MtrunA17_Chr5g0433881 | 60.956 | 251 | 64 | 7 | 53 | 283 | 17 | 253 | 8.80e-84 | 268 |
| Msa1011580 | MtrunA17_Chr1g0169381 | 73.494 | 166 | 33 | 2 | 1 | 166 | 1 | 155 | 2.46e-79 | 251 |
| Msa1011580 | MtrunA17_Chr4g0051351 | 46.288 | 229 | 112 | 3 | 6 | 234 | 92 | 309 | 2.74e-62 | 212 |
| Msa1011580 | MtrunA17_Chr4g0028681 | 72.000 | 150 | 31 | 2 | 68 | 216 | 1 | 140 | 4.36e-62 | 204 |
| Msa1011580 | MtrunA17_Chr6g0478851 | 33.945 | 218 | 127 | 3 | 510 | 716 | 61 | 272 | 1.04e-34 | 133 |
| Msa1011580 | MtrunA17_Chr7g0214621 | 30.078 | 256 | 154 | 6 | 510 | 753 | 32 | 274 | 1.22e-31 | 130 |
| Msa1011580 | MtrunA17_Chr6g0475061 | 34.911 | 169 | 93 | 3 | 593 | 751 | 5 | 166 | 1.21e-23 | 103 |
| Msa1011580 | MtrunA17_Chr3g0083571 | 26.432 | 227 | 147 | 7 | 5 | 220 | 45 | 262 | 2.20e-19 | 89.7 |
| Msa1011580 | MtrunA17_Chr8g0352701 | 28.378 | 222 | 137 | 6 | 10 | 220 | 52 | 262 | 7.06e-19 | 88.2 |
| Msa1011580 | MtrunA17_Chr7g0275701 | 36.000 | 125 | 78 | 1 | 3 | 125 | 53 | 177 | 1.19e-17 | 84.7 |
| Msa1011580 | MtrunA17_Chr3g0126851 | 36.667 | 120 | 74 | 1 | 7 | 124 | 56 | 175 | 1.40e-17 | 84.7 |
| Msa1011580 | MtrunA17_Chr8g0346801 | 35.484 | 124 | 78 | 1 | 3 | 124 | 36 | 159 | 2.23e-17 | 84.0 |
| Msa1011580 | MtrunA17_Chr1g0147041 | 35.833 | 120 | 75 | 1 | 7 | 124 | 64 | 183 | 1.48e-16 | 81.6 |
| Msa1011580 | MtrunA17_Chr1g0175721 | 34.483 | 116 | 74 | 1 | 11 | 124 | 58 | 173 | 3.23e-16 | 80.5 |
| Msa1011580 | MtrunA17_Chr7g0253271 | 25.221 | 226 | 144 | 4 | 27 | 248 | 3 | 207 | 7.58e-16 | 77.4 |
| Msa1011580 | MtrunA17_Chr7g0258941 | 33.621 | 116 | 75 | 1 | 11 | 124 | 59 | 174 | 1.81e-15 | 78.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1011580 | AT5G37930.1 | 35.081 | 248 | 147 | 3 | 4 | 247 | 103 | 340 | 7.90e-43 | 159 |
| Msa1011580 | AT5G37870.1 | 31.890 | 254 | 158 | 6 | 6 | 253 | 37 | 281 | 9.42e-36 | 137 |
| Msa1011580 | AT5G37890.1 | 33.047 | 233 | 134 | 4 | 10 | 234 | 47 | 265 | 1.07e-34 | 134 |
| Msa1011580 | AT1G66660.2 | 32.283 | 254 | 158 | 6 | 2 | 248 | 94 | 340 | 1.74e-34 | 135 |
| Msa1011580 | AT1G66620.1 | 32.669 | 251 | 150 | 5 | 5 | 247 | 35 | 274 | 5.65e-34 | 132 |
| Msa1011580 | AT1G66650.1 | 31.474 | 251 | 159 | 6 | 4 | 247 | 76 | 320 | 4.28e-33 | 130 |
| Msa1011580 | AT1G66630.1 | 30.682 | 264 | 155 | 5 | 5 | 247 | 40 | 296 | 7.07e-33 | 129 |
| Msa1011580 | AT5G37910.1 | 29.804 | 255 | 165 | 5 | 4 | 256 | 28 | 270 | 6.54e-30 | 120 |
| Msa1011580 | AT5G62800.1 | 31.034 | 261 | 165 | 7 | 11 | 264 | 40 | 292 | 3.81e-28 | 117 |
| Msa1011580 | AT5G62800.2 | 35.567 | 194 | 113 | 5 | 11 | 200 | 40 | 225 | 3.89e-27 | 113 |
| Msa1011580 | AT3G61790.1 | 35.484 | 124 | 78 | 1 | 3 | 124 | 52 | 175 | 6.43e-18 | 86.3 |
| Msa1011580 | AT1G66660.1 | 28.638 | 213 | 136 | 8 | 43 | 248 | 13 | 216 | 2.82e-17 | 82.0 |
| Msa1011580 | AT4G27880.1 | 35.878 | 131 | 77 | 3 | 10 | 133 | 60 | 190 | 6.76e-17 | 83.2 |
| Msa1011580 | AT3G58040.1 | 25.957 | 235 | 155 | 7 | 10 | 234 | 56 | 281 | 7.73e-16 | 79.7 |
| Msa1011580 | AT3G58040.3 | 25.957 | 235 | 155 | 7 | 10 | 234 | 56 | 281 | 7.73e-16 | 79.7 |
| Msa1011580 | AT2G41980.1 | 25.098 | 255 | 166 | 8 | 10 | 248 | 53 | 298 | 1.00e-15 | 79.3 |
| Msa1011580 | AT3G58040.2 | 33.333 | 117 | 76 | 1 | 10 | 124 | 56 | 172 | 2.80e-15 | 76.3 |
| Msa1011580 | AT1G66610.2 | 48.611 | 72 | 37 | 0 | 5 | 76 | 152 | 223 | 2.37e-14 | 73.9 |
| Msa1011580 | AT1G66610.2 | 47.619 | 63 | 33 | 0 | 11 | 73 | 53 | 115 | 6.69e-12 | 66.6 |
| Msa1011580 | AT1G66610.1 | 25.085 | 295 | 149 | 8 | 5 | 234 | 47 | 334 | 2.47e-14 | 75.9 |
| Msa1011580 | AT5G37900.1 | 25.600 | 250 | 140 | 7 | 5 | 248 | 26 | 235 | 4.66e-12 | 67.0 |
Find 170 sgRNAs with CRISPR-Local
Find 402 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGCAGTCCTTTCTATTTC+TGG | 0.033630 | 7_1:+16157328 | None:intergenic |
| CAATAATGCTACTATGAATT+TGG | 0.079505 | 7_1:-16159893 | Msa1011580:CDS |
| TGCATTGGTCCTAACTCTTC+TGG | 0.129441 | 7_1:-16159850 | Msa1011580:CDS |
| CCATGTTACTGTCCCCTTTC+AGG | 0.141370 | 7_1:-16160111 | Msa1011580:CDS |
| TCTAAGTATTCCTGTCTTTC+AGG | 0.178018 | 7_1:-16161780 | Msa1011580:intron |
| AGTAATTTGTATTCTTATTA+AGG | 0.178934 | 7_1:-16158916 | Msa1011580:CDS |
| TGTACCACCAAGACCGAAAT+TGG | 0.205954 | 7_1:-16157194 | Msa1011580:CDS |
| AGTCTCTATTTGTTTGTTCA+TGG | 0.223993 | 7_1:+16156487 | None:intergenic |
| ATTTCCCGATGTCTAAATAT+TGG | 0.226270 | 7_1:-16156841 | Msa1011580:CDS |
| TGTATTATTTCTCCACTCAT+AGG | 0.290006 | 7_1:+16158972 | None:intergenic |
| TATTACTGAATCTGAAACTA+TGG | 0.314303 | 7_1:-16157224 | Msa1011580:CDS |
| TGGAGTTCATGGTGACATTA+TGG | 0.331326 | 7_1:-16158576 | Msa1011580:CDS |
| CAGCTCTTGGATTTAGTAAT+CGG | 0.343779 | 7_1:+16159053 | None:intergenic |
| AAATGAGTTACACTGGAAAT+AGG | 0.344851 | 7_1:-16160161 | Msa1011580:CDS |
| TTTCCCGATGTCTAAATATT+GGG | 0.345899 | 7_1:-16156840 | Msa1011580:CDS |
| TGACACTTGTTCCTAAGTTT+AGG | 0.348740 | 7_1:+16160288 | None:intergenic |
| TCTCAGTGAACTCATGATTA+GGG | 0.350907 | 7_1:+16156726 | None:intergenic |
| AACCCATAGTCTCCCAATTT+CGG | 0.353838 | 7_1:+16157181 | None:intergenic |
| AAGAAAGAAAGAGGAGTGTT+TGG | 0.362667 | 7_1:-16156548 | Msa1011580:CDS |
| AGACCGAAATTGGGAGACTA+TGG | 0.363210 | 7_1:-16157184 | Msa1011580:CDS |
| AGAAGAAACTTTGAGAAAAC+AGG | 0.368086 | 7_1:-16158665 | Msa1011580:CDS |
| TTCTCAGTGAACTCATGATT+AGG | 0.375086 | 7_1:+16156725 | None:intergenic |
| GTCAAATCCTTAATAAGAAA+TGG | 0.375266 | 7_1:+16158882 | None:intergenic |
| CGAGTATAGTTATGATATAT+TGG | 0.382189 | 7_1:-16159824 | Msa1011580:CDS |
| AGAAAGAAAGAGGAGTGTTT+GGG | 0.382601 | 7_1:-16156547 | Msa1011580:CDS |
| AATAATGCTACTATGAATTT+GGG | 0.385162 | 7_1:-16159892 | Msa1011580:CDS |
| ATTGTCTCCTTGAAGTCTAA+TGG | 0.388929 | 7_1:-16159964 | Msa1011580:CDS |
| CTCAACAGGTGGCGGCAATC+AGG | 0.392371 | 7_1:-16156424 | Msa1011580:CDS |
| TAGTCTCCCAATTTCGGTCT+TGG | 0.392885 | 7_1:+16157187 | None:intergenic |
| CAAATGCAAAACATGGTTGC+AGG | 0.393656 | 7_1:-16160188 | Msa1011580:CDS |
| GGTGGATGATTGCCAGCTCT+TGG | 0.395316 | 7_1:+16159040 | None:intergenic |
| GCATTGGTCCTAACTCTTCT+GGG | 0.401380 | 7_1:-16159849 | Msa1011580:CDS |
| GTAATAATCTGCTCCGGTAT+TGG | 0.401865 | 7_1:+16157241 | None:intergenic |
| TGAGTCACTATATGATGCTT+GGG | 0.405128 | 7_1:-16156777 | Msa1011580:CDS |
| CCCCATGTTTATGGCTGAAA+TGG | 0.405710 | 7_1:+16160052 | None:intergenic |
| TTTGTTCATGGCTGCTTGGT+TGG | 0.410130 | 7_1:+16156499 | None:intergenic |
| GTGGCACGTTTGCTTAAACT+TGG | 0.413585 | 7_1:+16158632 | None:intergenic |
| AAACGTGCCACGTTGGTAAC+TGG | 0.413631 | 7_1:-16158620 | Msa1011580:CDS |
| TATCCCAATATTTAGACATC+GGG | 0.414152 | 7_1:+16156837 | None:intergenic |
| TGCTCTGCCGGTCAAGGTGA+AGG | 0.427770 | 7_1:+16156940 | None:intergenic |
| TCTAAGAACATCCTAGTGTT+AGG | 0.429616 | 7_1:+16156668 | None:intergenic |
| TCGTATAGTTGGTGGACGTT+TGG | 0.433934 | 7_1:+16162045 | None:intergenic |
| GCAGTCAATATTTGCTGCAT+TGG | 0.437797 | 7_1:-16159865 | Msa1011580:CDS |
| TGGCACGTTTGCTTAAACTT+GGG | 0.440453 | 7_1:+16158633 | None:intergenic |
| TTTGTTTGTTCATGGCTGCT+TGG | 0.441542 | 7_1:+16156495 | None:intergenic |
| AATCCGTTCCACTGGGTGTA+CGG | 0.444062 | 7_1:-16157267 | Msa1011580:CDS |
| GTTGTCTCAATCCGTTCCAC+TGG | 0.447378 | 7_1:-16157275 | Msa1011580:CDS |
| AACAAAGTCACAACCTGAAA+GGG | 0.450677 | 7_1:+16160098 | None:intergenic |
| GGTTCCACCATTAGACTTCA+AGG | 0.451128 | 7_1:+16159957 | None:intergenic |
| AATTTCGGTCTTGGTGGTAC+AGG | 0.451581 | 7_1:+16157196 | None:intergenic |
| CTTGGCTAACAAGCCTCAAC+AGG | 0.452696 | 7_1:-16156438 | Msa1011580:CDS |
| CATGTTTGAACGGTCCCATT+GGG | 0.452924 | 7_1:+16156896 | None:intergenic |
| AGAGGTTCAGAAGAACGAAA+TGG | 0.462744 | 7_1:+16159706 | None:intergenic |
| TGTGCATCAGTCACGGTGGC+TGG | 0.466947 | 7_1:+16156983 | None:intergenic |
| GTTGTAATTCAGTGTGATAA+TGG | 0.467413 | 7_1:-16160336 | Msa1011580:intron |
| GTATTATTTCTCCACTCATA+GGG | 0.469230 | 7_1:+16158973 | None:intergenic |
| ATGAGTCACTATATGATGCT+TGG | 0.472706 | 7_1:-16156778 | Msa1011580:CDS |
| CCATGTTTGAACGGTCCCAT+TGG | 0.479576 | 7_1:+16156895 | None:intergenic |
| TGAAAGACAGGAATACTTAG+AGG | 0.482175 | 7_1:+16161782 | None:intergenic |
| TGTCTGAACTCTTAACCCTC+AGG | 0.482923 | 7_1:+16159261 | None:intergenic |
| AAAACGCAACGTGCCACGAT+TGG | 0.487841 | 7_1:-16158534 | Msa1011580:intron |
| TACTCGGACCCAGAAGAGTT+AGG | 0.488196 | 7_1:+16159841 | None:intergenic |
| ATCCGTTCCACTGGGTGTAC+GGG | 0.492483 | 7_1:-16157266 | Msa1011580:CDS |
| TTGGTCTTTCGTATAGTTGG+TGG | 0.492622 | 7_1:+16162037 | None:intergenic |
| TCTCCCAATTTCGGTCTTGG+TGG | 0.493511 | 7_1:+16157190 | None:intergenic |
| TTGAAACGATGTGGAGTTCA+TGG | 0.497836 | 7_1:-16158587 | Msa1011580:CDS |
| CTATTCCCCTTCACCTTGAC+CGG | 0.498929 | 7_1:-16156947 | Msa1011580:CDS |
| GCCAACGGCTGCAGATGATA+AGG | 0.499777 | 7_1:+16159019 | None:intergenic |
| GGGTGTACGGGAACCAATAC+CGG | 0.503119 | 7_1:-16157254 | Msa1011580:CDS |
| TGGATCGTACTCTAAGTTGT+CGG | 0.503811 | 7_1:+16157348 | None:intergenic |
| CTGATGCACAAAAGAAGCTC+AGG | 0.503898 | 7_1:-16156970 | Msa1011580:CDS |
| GTTCCTAAGTTTAGGACAGC+AGG | 0.503985 | 7_1:+16160296 | None:intergenic |
| CTACCTGCTGTCCTAAACTT+AGG | 0.504618 | 7_1:-16160299 | Msa1011580:CDS |
| CTGAGAAGTAGTAGAATCCT+TGG | 0.504857 | 7_1:+16161995 | None:intergenic |
| CAATATATCATAACTATACT+CGG | 0.508438 | 7_1:+16159825 | None:intergenic |
| CAAATGCATACCTGAAAGAC+AGG | 0.508688 | 7_1:+16161770 | None:intergenic |
| GGTTGTTAACTATACCCAAT+GGG | 0.509079 | 7_1:-16156910 | Msa1011580:CDS |
| CTGATTGCCGCCACCTGTTG+AGG | 0.510011 | 7_1:+16156425 | None:intergenic |
| TAAATATTGGGATAAGAAGA+TGG | 0.513250 | 7_1:-16156828 | Msa1011580:CDS |
| ACCTTATCATCTGCAGCCGT+TGG | 0.517263 | 7_1:-16159020 | Msa1011580:CDS |
| GCTCTGCCGGTCAAGGTGAA+GGG | 0.522899 | 7_1:+16156941 | None:intergenic |
| TTATCCCAATATTTAGACAT+CGG | 0.524197 | 7_1:+16156836 | None:intergenic |
| GCCACGTTGGTAACTGGTCG+TGG | 0.525802 | 7_1:-16158614 | Msa1011580:CDS |
| GGTTAGCTGGTTGAAAAGTG+TGG | 0.527246 | 7_1:+16157134 | None:intergenic |
| CCAATGGGACCGTTCAAACA+TGG | 0.528356 | 7_1:-16156895 | Msa1011580:CDS |
| TTCTTAGATGCTTCCGCGGG+AGG | 0.528659 | 7_1:-16156653 | Msa1011580:CDS |
| ATGCAAATTTCTAGCTTGAG+AGG | 0.533709 | 7_1:+16159688 | None:intergenic |
| GTCTGAACTCTTAACCCTCA+GGG | 0.537566 | 7_1:+16159262 | None:intergenic |
| AGTACGATCCAGAAATAGAA+AGG | 0.539765 | 7_1:-16157336 | Msa1011580:CDS |
| GTACCACCAAGACCGAAATT+GGG | 0.539863 | 7_1:-16157193 | Msa1011580:CDS |
| CAACAAAGTCACAACCTGAA+AGG | 0.540955 | 7_1:+16160097 | None:intergenic |
| ATTGAGACAACCGTTGCAAA+CGG | 0.542509 | 7_1:+16157287 | None:intergenic |
| TTCTCTCAAACCGTTGAGAA+CGG | 0.542886 | 7_1:+16157087 | None:intergenic |
| TACCTCCAAATCTTCACTGA+GGG | 0.555381 | 7_1:-16156698 | Msa1011580:CDS |
| TAACAAGCCTCAACAGGTGG+CGG | 0.559214 | 7_1:-16156432 | Msa1011580:CDS |
| AACCATTTCAGCCATAAACA+TGG | 0.562638 | 7_1:-16160054 | Msa1011580:CDS |
| AGATTTCGAATTTCAAGCAA+GGG | 0.564965 | 7_1:-16156805 | Msa1011580:CDS |
| GGAAAGCTGTCCGTTTGCAA+CGG | 0.565872 | 7_1:-16157297 | Msa1011580:CDS |
| AAGCAGCTCAAGTGTTCATG+TGG | 0.567771 | 7_1:+16157034 | None:intergenic |
| TTGGATTTAGTAATCGGTGA+TGG | 0.570506 | 7_1:+16159059 | None:intergenic |
| TTGTCTCAATCCGTTCCACT+GGG | 0.571008 | 7_1:-16157274 | Msa1011580:CDS |
| GATTCAGTAATAATCTGCTC+CGG | 0.573029 | 7_1:+16157235 | None:intergenic |
| TGGTTGTTAACTATACCCAA+TGG | 0.573600 | 7_1:-16156911 | Msa1011580:CDS |
| CTCTGCCGGTCAAGGTGAAG+GGG | 0.577369 | 7_1:+16156942 | None:intergenic |
| TCAAGCTCTAATCGAAAACA+TGG | 0.578841 | 7_1:-16156600 | Msa1011580:CDS |
| GAGATTTCGAATTTCAAGCA+AGG | 0.579581 | 7_1:-16156806 | Msa1011580:CDS |
| GATGTTCTTAGATGCTTCCG+CGG | 0.580513 | 7_1:-16156657 | Msa1011580:CDS |
| TTCCCGTACACCCAGTGGAA+CGG | 0.581121 | 7_1:+16157264 | None:intergenic |
| CTATTAGTCAAAAGGTGCAA+TGG | 0.581593 | 7_1:-16161858 | Msa1011580:intron |
| ACCATTTCAGCCATAAACAT+GGG | 0.588005 | 7_1:-16160053 | Msa1011580:CDS |
| AGAGTTTCAGAGTTTCACCT+TGG | 0.588249 | 7_1:-16156456 | Msa1011580:CDS |
| ATGTTTATGGCTGAAATGGT+TGG | 0.588725 | 7_1:+16160056 | None:intergenic |
| CGATTACTAAATCCAAGAGC+TGG | 0.588815 | 7_1:-16159052 | Msa1011580:CDS |
| GTTAGCTGGTTGAAAAGTGT+GGG | 0.589016 | 7_1:+16157135 | None:intergenic |
| ATCAAGACCACCGTTCTCAA+CGG | 0.589372 | 7_1:-16157097 | Msa1011580:CDS |
| TAACTCCTCCCATGTTTGAA+CGG | 0.593021 | 7_1:+16156886 | None:intergenic |
| CTGTTGAGGCTTGTTAGCCA+AGG | 0.593867 | 7_1:+16156439 | None:intergenic |
| GAGTCACTATATGATGCTTG+GGG | 0.597146 | 7_1:-16156776 | Msa1011580:CDS |
| TGGAACCATTGTTCTTCAAG+AGG | 0.598400 | 7_1:-16159941 | Msa1011580:CDS |
| GAAGACAATCGCCCTATGAG+TGG | 0.598862 | 7_1:-16158984 | Msa1011580:CDS |
| CCTGAAAGGGGACAGTAACA+TGG | 0.599066 | 7_1:+16160111 | None:intergenic |
| ATGTTCTTAGATGCTTCCGC+GGG | 0.600789 | 7_1:-16156656 | Msa1011580:CDS |
| ACTTTGAGAATTGAACAAGA+AGG | 0.601256 | 7_1:-16158861 | Msa1011580:CDS |
| GATTTCGAATTTCAAGCAAG+GGG | 0.602759 | 7_1:-16156804 | Msa1011580:CDS |
| AAATGCAAAACATGGTTGCA+GGG | 0.602953 | 7_1:-16160187 | Msa1011580:CDS |
| TTAGAGTTTGAAATCGTCAG+AGG | 0.607477 | 7_1:+16161833 | None:intergenic |
| GGGGATCATCTTCGTAGTTG+GGG | 0.607602 | 7_1:+16159283 | None:intergenic |
| AGACTTCAAGGAGACAATGA+AGG | 0.608582 | 7_1:+16159969 | None:intergenic |
| GACCGAAATTGGGAGACTAT+GGG | 0.611595 | 7_1:-16157183 | Msa1011580:CDS |
| GAAAGAAAGAGGAGTGTTTG+GGG | 0.611992 | 7_1:-16156546 | Msa1011580:CDS |
| GGCTAACAAGCCTCAACAGG+TGG | 0.613552 | 7_1:-16156435 | Msa1011580:CDS |
| GCAAGTTCATCAACCAATCG+TGG | 0.613976 | 7_1:+16158521 | None:intergenic |
| GAGTTGCTAAAGTAAACTGT+TGG | 0.616702 | 7_1:+16159752 | None:intergenic |
| AAAGGACTGCAAGAGCACTT+CGG | 0.617084 | 7_1:-16157318 | Msa1011580:CDS |
| GTTCTTCAAGAGGAAAATGA+CGG | 0.617899 | 7_1:-16159931 | Msa1011580:CDS |
| CAATGGGACCGTTCAAACAT+GGG | 0.621265 | 7_1:-16156894 | Msa1011580:CDS |
| CCATTTCAGCCATAAACATG+GGG | 0.621391 | 7_1:-16160052 | Msa1011580:CDS |
| GTCTCCTTGAAGTCTAATGG+TGG | 0.621511 | 7_1:-16159961 | Msa1011580:CDS |
| AGTAATCGGTGATGGTGCGG+TGG | 0.630096 | 7_1:+16159067 | None:intergenic |
| AGGTGTGATTTATGTGGTGA+GGG | 0.631514 | 7_1:-16156404 | Msa1011580:CDS |
| ATCAACACATCAAGCCACCA+AGG | 0.636355 | 7_1:-16162012 | Msa1011580:five_prime_UTR |
| AGGGAGAAAATGAGTTACAC+TGG | 0.636460 | 7_1:-16160168 | Msa1011580:CDS |
| GCAATCAGGTGTGATTTATG+TGG | 0.639741 | 7_1:-16156410 | Msa1011580:CDS |
| CCATGTCCAAATGCAAAACA+TGG | 0.644251 | 7_1:-16160195 | Msa1011580:CDS |
| ACAAAGTCACAACCTGAAAG+GGG | 0.645303 | 7_1:+16160099 | None:intergenic |
| ACATCGGGAAATACTTCTCG+AGG | 0.645797 | 7_1:+16156852 | None:intergenic |
| TCTCAAACCGTTGAGAACGG+TGG | 0.645802 | 7_1:+16157090 | None:intergenic |
| CAGGTGTGATTTATGTGGTG+AGG | 0.648156 | 7_1:-16156405 | Msa1011580:CDS |
| TTCATTATAAGAGTTGCCAA+CGG | 0.648381 | 7_1:+16159004 | None:intergenic |
| AGCAGCTCAAGTGTTCATGT+GGG | 0.651437 | 7_1:+16157035 | None:intergenic |
| CTGAACTCTTAACCCTCAGG+GGG | 0.662405 | 7_1:+16159264 | None:intergenic |
| CCTCCAAATCTTCACTGAGG+GGG | 0.663041 | 7_1:-16156696 | Msa1011580:CDS |
| AGAAGTAGTAGAATCCTTGG+TGG | 0.664694 | 7_1:+16161998 | None:intergenic |
| TTTAAGCAAACGTGCCACGT+TGG | 0.665672 | 7_1:-16158627 | Msa1011580:CDS |
| AGACACAGTAGCCAATGTGA+AGG | 0.670298 | 7_1:-16159243 | Msa1011580:CDS |
| TTTAGTAATCGGTGATGGTG+CGG | 0.670627 | 7_1:+16159064 | None:intergenic |
| ATTGGTTCCCGTACACCCAG+TGG | 0.677496 | 7_1:+16157259 | None:intergenic |
| TCTGAACTCTTAACCCTCAG+GGG | 0.679402 | 7_1:+16159263 | None:intergenic |
| AACGGCTGCAGATGATAAGG+TGG | 0.680562 | 7_1:+16159022 | None:intergenic |
| CGTGGCACGTTGAAACGATG+TGG | 0.684338 | 7_1:-16158596 | Msa1011580:CDS |
| TGGGACCGTTCAAACATGGG+AGG | 0.687520 | 7_1:-16156891 | Msa1011580:CDS |
| ACCTCCAAATCTTCACTGAG+GGG | 0.696293 | 7_1:-16156697 | Msa1011580:CDS |
| AAGAACGAAATGGAATCACA+AGG | 0.699518 | 7_1:+16159716 | None:intergenic |
| ACTCTTAAGACTACCTCCCG+CGG | 0.708777 | 7_1:+16156640 | None:intergenic |
| GGAGATAGGCGGTACCATGG+GGG | 0.718009 | 7_1:+16159663 | None:intergenic |
| CATTTCAGCCATAAACATGG+GGG | 0.731821 | 7_1:-16160051 | Msa1011580:CDS |
| AGTCACTATATGATGCTTGG+GGG | 0.745228 | 7_1:-16156775 | Msa1011580:CDS |
| GTACCTCCAAATCTTCACTG+AGG | 0.756057 | 7_1:-16156699 | Msa1011580:CDS |
| GCCACGACCAGTTACCAACG+TGG | 0.760252 | 7_1:+16158613 | None:intergenic |
| TATGGGTTAGCTACTCATCG+CGG | 0.780563 | 7_1:-16157166 | Msa1011580:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GAGTATTATAATTTTTTTTA+AGG | - | chr7_1:16157544-16157563 | Msa1011580:intron | 10.0% |
| !! | TCAAAAAAAAAAATTTCTTA+TGG | - | chr7_1:16158446-16158465 | Msa1011580:intron | 10.0% |
| !!! | ATATTCTTTTATTGATTTAA+TGG | - | chr7_1:16159104-16159123 | Msa1011580:intron | 10.0% |
| !! | ATATTTATAGAAAGAAATTA+GGG | + | chr7_1:16160023-16160042 | None:intergenic | 10.0% |
| !! | TTGATTATATAAAGTTGTAA+TGG | - | chr7_1:16156551-16156570 | Msa1011580:CDS | 15.0% |
| !! | TAAATATGAGTATATAATTG+GGG | + | chr7_1:16157051-16157070 | None:intergenic | 15.0% |
| !! | CTAAATATGAGTATATAATT+GGG | + | chr7_1:16157052-16157071 | None:intergenic | 15.0% |
| !!! | AGAAACTATTTTATTTTGTT+AGG | + | chr7_1:16157512-16157531 | None:intergenic | 15.0% |
| !! | AATAAAATAGTTTCTTTCAA+TGG | - | chr7_1:16157517-16157536 | Msa1011580:intron | 15.0% |
| !! | ATAAAATAGTTTCTTTCAAT+GGG | - | chr7_1:16157518-16157537 | Msa1011580:intron | 15.0% |
| !! | AAAAAAAAAAAGCAAAGAAA+AGG | + | chr7_1:16158804-16158823 | None:intergenic | 15.0% |
| !! | GAAAATAATAAGACTTTAAT+TGG | + | chr7_1:16158831-16158850 | None:intergenic | 15.0% |
| !!! | AGTAATTTGTATTCTTATTA+AGG | - | chr7_1:16159527-16159546 | Msa1011580:intron | 15.0% |
| !!! | TTAGTTTTTTAGTCATATTT+AGG | - | chr7_1:16159677-16159696 | Msa1011580:intron | 15.0% |
| !! | GATATTTATAGAAAGAAATT+AGG | + | chr7_1:16160024-16160043 | None:intergenic | 15.0% |
| !! | TTAAACAAAATTACTATTTC+AGG | + | chr7_1:16160426-16160445 | None:intergenic | 15.0% |
| !! | AATCAAGTTAAGATATTAAT+AGG | - | chr7_1:16160528-16160547 | Msa1011580:intron | 15.0% |
| !! | ATCAAGTTAAGATATTAATA+GGG | - | chr7_1:16160529-16160548 | Msa1011580:intron | 15.0% |
| !!! | TTTAAAATTTTTCTGAGTTT+CGG | - | chr7_1:16160999-16161018 | Msa1011580:intron | 15.0% |
| !! | TTTAATCACTATTAGTCAAA+AGG | - | chr7_1:16156577-16156596 | Msa1011580:CDS | 20.0% |
| !! | ATATATATGCAATATGTTTC+TGG | - | chr7_1:16156742-16156761 | Msa1011580:CDS | 20.0% |
| !! | ATAGATTCTGATAATATCTT+AGG | - | chr7_1:16156970-16156989 | Msa1011580:CDS | 20.0% |
| !! | AAATATGAGTATATAATTGG+GGG | + | chr7_1:16157050-16157069 | None:intergenic | 20.0% |
| !! | CCTAAATATGAGTATATAAT+TGG | + | chr7_1:16157053-16157072 | None:intergenic | 20.0% |
| !! | CCAATTATATACTCATATTT+AGG | - | chr7_1:16157050-16157069 | Msa1011580:CDS | 20.0% |
| !! | ATTAATTAGAAAATGCATGA+TGG | - | chr7_1:16157128-16157147 | Msa1011580:CDS | 20.0% |
| !!! | ACTTGATTTTCTCAATTTAA+AGG | - | chr7_1:16157197-16157216 | Msa1011580:CDS | 20.0% |
| !! | AATAAAATTAAGTGAAAGAG+AGG | - | chr7_1:16157477-16157496 | Msa1011580:intron | 20.0% |
| !! | TAAAATAGTTTCTTTCAATG+GGG | - | chr7_1:16157519-16157538 | Msa1011580:intron | 20.0% |
| !! | TATAAAAGCTCAAAAATAGA+AGG | + | chr7_1:16157823-16157842 | None:intergenic | 20.0% |
| !!! | TCTCAAATCAAATTTTCTTA+TGG | - | chr7_1:16158416-16158435 | Msa1011580:intron | 20.0% |
| !! | AATAATGCTACTATGAATTT+GGG | - | chr7_1:16158551-16158570 | Msa1011580:CDS | 20.0% |
| !! | CAATATATCATAACTATACT+CGG | + | chr7_1:16158621-16158640 | None:intergenic | 20.0% |
| !!! | CTAACAAAACAACTTTATTT+TGG | + | chr7_1:16158913-16158932 | None:intergenic | 20.0% |
| !! | AAATTTATTACAGTACAACA+GGG | + | chr7_1:16159023-16159042 | None:intergenic | 20.0% |
| !! | AAAATTTATTACAGTACAAC+AGG | + | chr7_1:16159024-16159043 | None:intergenic | 20.0% |
| !!! | TTTTATTGATTTAATGGCAA+TGG | - | chr7_1:16159110-16159129 | Msa1011580:intron | 20.0% |
| !! | GATAGTATATATGTTGAAAA+AGG | - | chr7_1:16159617-16159636 | Msa1011580:intron | 20.0% |
| !! | TATTAATAGGGTTATAACTT+AGG | - | chr7_1:16160541-16160560 | Msa1011580:intron | 20.0% |
| !! | TTTACGATAAATTAACTAAG+TGG | + | chr7_1:16160598-16160617 | None:intergenic | 20.0% |
| !! | TTTATCAGACTTAATTAAAG+TGG | + | chr7_1:16160728-16160747 | None:intergenic | 20.0% |
| !!! | CAGTTTTGTAAAATTGAGTT+AGG | + | chr7_1:16157008-16157027 | None:intergenic | 25.0% |
| !!! | TTTTACAAAACTGACTTGTA+AGG | - | chr7_1:16157015-16157034 | Msa1011580:CDS | 25.0% |
| !!! | CTCGGTTCTATTTTTAAAAT+AGG | - | chr7_1:16157362-16157381 | Msa1011580:intron | 25.0% |
| !!! | AATTGCGTTTTGATTTTACT+GGG | + | chr7_1:16157389-16157408 | None:intergenic | 25.0% |
| ! | AAAATAGTTTCTTTCAATGG+GGG | - | chr7_1:16157520-16157539 | Msa1011580:intron | 25.0% |
| !! | AAGACTTGTTTGATTTACAT+TGG | - | chr7_1:16157735-16157754 | Msa1011580:intron | 25.0% |
| !! | AGACTTGTTTGATTTACATT+GGG | - | chr7_1:16157736-16157755 | Msa1011580:intron | 25.0% |
| ! | AAAGTTTAGAGAAACAATAC+AGG | + | chr7_1:16157861-16157880 | None:intergenic | 25.0% |
| !! | TGTATTGTTTCTCTAAACTT+TGG | - | chr7_1:16157860-16157879 | Msa1011580:intron | 25.0% |
| !! | CTATACTGCTATAGTATTTT+GGG | - | chr7_1:16157906-16157925 | Msa1011580:intron | 25.0% |
| ! | AAAATCAATGTACTCAAAGA+CGG | + | chr7_1:16157945-16157964 | None:intergenic | 25.0% |
| !! | CTTTATTTGATTCTAGCAAA+TGG | - | chr7_1:16158053-16158072 | Msa1011580:intron | 25.0% |
| !!! | TGGTTCAAAGTTTAATTTGA+TGG | - | chr7_1:16158073-16158092 | Msa1011580:intron | 25.0% |
| ! | CAATAATGCTACTATGAATT+TGG | - | chr7_1:16158550-16158569 | Msa1011580:CDS | 25.0% |
| ! | CGAGTATAGTTATGATATAT+TGG | - | chr7_1:16158619-16158638 | Msa1011580:CDS | 25.0% |
| !! | GCATTTTATCTCAAATTCAT+CGG | - | chr7_1:16158876-16158895 | Msa1011580:CDS | 25.0% |
| !! | GACTTTTCCATTTCTTATTA+AGG | - | chr7_1:16159554-16159573 | Msa1011580:intron | 25.0% |
| ! | GTCAAATCCTTAATAAGAAA+TGG | + | chr7_1:16159564-16159583 | None:intergenic | 25.0% |
| ! | ACATACATAAATCTAACCAA+CGG | + | chr7_1:16160147-16160166 | None:intergenic | 25.0% |
| !!! | TGTATGTTTTCTCTTGTTAT+TGG | - | chr7_1:16160160-16160179 | Msa1011580:CDS | 25.0% |
| ! | ATATTACAATAGTCTCATCA+TGG | + | chr7_1:16160232-16160251 | None:intergenic | 25.0% |
| ! | TATTTCAGGATTAAAAGCTA+GGG | + | chr7_1:16160412-16160431 | None:intergenic | 25.0% |
| !!! | ATTTTGTTTAACTCAACACT+AGG | - | chr7_1:16160435-16160454 | Msa1011580:intron | 25.0% |
| !! | CTTTTCATATAAAGCAATAG+CGG | - | chr7_1:16160652-16160671 | Msa1011580:intron | 25.0% |
| ! | GAAAATAATGTTGAGATGAA+TGG | + | chr7_1:16160692-16160711 | None:intergenic | 25.0% |
| !! | ATTACTACTTCGATAGTTTT+TGG | - | chr7_1:16160853-16160872 | Msa1011580:intron | 25.0% |
| ! | ACTGTTGAATTATTTCAACA+AGG | - | chr7_1:16160921-16160940 | Msa1011580:intron | 25.0% |
| ! | AGGCAATTACGTTATAATTT+AGG | - | chr7_1:16160941-16160960 | Msa1011580:intron | 25.0% |
| !! | TATTACTGAATCTGAAACTA+TGG | - | chr7_1:16161219-16161238 | Msa1011580:intron | 25.0% |
| ! | TTATCCCAATATTTAGACAT+CGG | + | chr7_1:16161610-16161629 | None:intergenic | 25.0% |
| ! | TAAATATTGGGATAAGAAGA+TGG | - | chr7_1:16161615-16161634 | Msa1011580:intron | 25.0% |
| !! | TTTTTGGTCTTTCGTATAGT+TGG | + | chr7_1:16156412-16156431 | None:intergenic | 30.0% |
| ATCTATCCAAAAAAATCCGT+TGG | + | chr7_1:16156956-16156975 | None:intergenic | 30.0% | |
| TAACATAGAGTTCACTTTAG+TGG | - | chr7_1:16157094-16157113 | Msa1011580:CDS | 30.0% | |
| AACATAGAGTTCACTTTAGT+GGG | - | chr7_1:16157095-16157114 | Msa1011580:CDS | 30.0% | |
| !! | AAATGCATGATGGATATTGA+AGG | - | chr7_1:16157138-16157157 | Msa1011580:CDS | 30.0% |
| TAGTAGGAAACAGAAAAGAA+TGG | - | chr7_1:16157248-16157267 | Msa1011580:CDS | 30.0% | |
| TCCCTATAGACAAAACAATT+AGG | - | chr7_1:16157283-16157302 | Msa1011580:CDS | 30.0% | |
| !! | CCCTAATTGTTTTGTCTATA+GGG | + | chr7_1:16157287-16157306 | None:intergenic | 30.0% |
| CCCTATAGACAAAACAATTA+GGG | - | chr7_1:16157284-16157303 | Msa1011580:CDS | 30.0% | |
| !! | TCCCTAATTGTTTTGTCTAT+AGG | + | chr7_1:16157288-16157307 | None:intergenic | 30.0% |
| ATAGATGCATAACAAATGAC+AGG | - | chr7_1:16157317-16157336 | Msa1011580:CDS | 30.0% | |
| TAGATGCATAACAAATGACA+GGG | - | chr7_1:16157318-16157337 | Msa1011580:CDS | 30.0% | |
| !!! | ATTGCGTTTTGATTTTACTG+GGG | + | chr7_1:16157388-16157407 | None:intergenic | 30.0% |
| !!! | GAATTGCGTTTTGATTTTAC+TGG | + | chr7_1:16157390-16157409 | None:intergenic | 30.0% |
| !!! | ATGTGTTTTTTAAGCCTTAG+AGG | - | chr7_1:16157710-16157729 | Msa1011580:intron | 30.0% |
| TTCTCTAAACTTTGGTATTG+TGG | - | chr7_1:16157868-16157887 | Msa1011580:intron | 30.0% | |
| AAATACTATAGCAGTATAGC+AGG | + | chr7_1:16157905-16157924 | None:intergenic | 30.0% | |
| ! | GCTATACTGCTATAGTATTT+TGG | - | chr7_1:16157905-16157924 | Msa1011580:intron | 30.0% |
| GTTGTAATTCAGTGTGATAA+TGG | - | chr7_1:16158107-16158126 | Msa1011580:intron | 30.0% | |
| AAATGAGTTACACTGGAAAT+AGG | - | chr7_1:16158282-16158301 | Msa1011580:intron | 30.0% | |
| ! | ATTTTCCTCTTGAAGAACAA+TGG | + | chr7_1:16158510-16158529 | None:intergenic | 30.0% |
| AAAAGCAAAGAAAAGGAGAT+AGG | + | chr7_1:16158797-16158816 | None:intergenic | 30.0% | |
| ! | GATCAATGTGTTGTTAATTG+CGG | - | chr7_1:16159070-16159089 | Msa1011580:CDS | 30.0% |
| AAAAATCATCTCCTTCACAT+TGG | + | chr7_1:16159214-16159233 | None:intergenic | 30.0% | |
| TTCATTATAAGAGTTGCCAA+CGG | + | chr7_1:16159442-16159461 | None:intergenic | 30.0% | |
| ! | GTATTATTTCTCCACTCATA+GGG | + | chr7_1:16159473-16159492 | None:intergenic | 30.0% |
| ! | TGTATTATTTCTCCACTCAT+AGG | + | chr7_1:16159474-16159493 | None:intergenic | 30.0% |
| ! | ACTTTGAGAATTGAACAAGA+AGG | - | chr7_1:16159582-16159601 | Msa1011580:intron | 30.0% |
| TTGAAAAAGGATAGTGATGA+TGG | - | chr7_1:16159630-16159649 | Msa1011580:intron | 30.0% | |
| ! | AGAAGAAACTTTGAGAAAAC+AGG | - | chr7_1:16159778-16159797 | Msa1011580:CDS | 30.0% |
| CAATCACATGAATTGATCTT+AGG | - | chr7_1:16160369-16160388 | Msa1011580:intron | 30.0% | |
| CTATTTCAGGATTAAAAGCT+AGG | + | chr7_1:16160413-16160432 | None:intergenic | 30.0% | |
| ! | TTAACTTGATTGAATAACCG+TGG | + | chr7_1:16160519-16160538 | None:intergenic | 30.0% |
| ATAGGGTTATAACTTAGGAA+AGG | - | chr7_1:16160546-16160565 | Msa1011580:intron | 30.0% | |
| TAGGGTTATAACTTAGGAAA+GGG | - | chr7_1:16160547-16160566 | Msa1011580:intron | 30.0% | |
| GGATGTGTAAAGTTTGTATT+TGG | + | chr7_1:16160775-16160794 | None:intergenic | 30.0% | |
| TGAAATTAACACAATCCTTG+TGG | - | chr7_1:16160820-16160839 | Msa1011580:intron | 30.0% | |
| GTAATAAATATCGATCCACA+AGG | + | chr7_1:16160838-16160857 | None:intergenic | 30.0% | |
| CCAAAAACTTGATAGATATC+TGG | + | chr7_1:16160887-16160906 | None:intergenic | 30.0% | |
| ! | CCAGATATCTATCAAGTTTT+TGG | - | chr7_1:16160884-16160903 | Msa1011580:intron | 30.0% |
| ATTTCCCGATGTCTAAATAT+TGG | - | chr7_1:16161602-16161621 | Msa1011580:intron | 30.0% | |
| TTTCCCGATGTCTAAATATT+GGG | - | chr7_1:16161603-16161622 | Msa1011580:intron | 30.0% | |
| TATCCCAATATTTAGACATC+GGG | + | chr7_1:16161609-16161628 | None:intergenic | 30.0% | |
| AGATTTCGAATTTCAAGCAA+GGG | - | chr7_1:16161638-16161657 | Msa1011580:intron | 30.0% | |
| AGTCTCTATTTGTTTGTTCA+TGG | + | chr7_1:16161959-16161978 | None:intergenic | 30.0% | |
| !!! | TGGCTTGATGTGTTGATTTT+TGG | + | chr7_1:16156428-16156447 | None:intergenic | 35.0% |
| ! | CTATTAGTCAAAAGGTGCAA+TGG | - | chr7_1:16156585-16156604 | Msa1011580:CDS | 35.0% |
| ! | TTAGAGTTTGAAATCGTCAG+AGG | + | chr7_1:16156613-16156632 | None:intergenic | 35.0% |
| TGAAAGACAGGAATACTTAG+AGG | + | chr7_1:16156664-16156683 | None:intergenic | 35.0% | |
| TCTAAGTATTCCTGTCTTTC+AGG | - | chr7_1:16156663-16156682 | Msa1011580:CDS | 35.0% | |
| ! | TTTTGTCTATAGGGACATCT+TGG | + | chr7_1:16157278-16157297 | None:intergenic | 35.0% |
| !! | TTAAGGCCCATAGTTTTTAG+AGG | - | chr7_1:16157561-16157580 | Msa1011580:intron | 35.0% |
| ! | ACCGAACCTCTAAAAACTAT+GGG | + | chr7_1:16157570-16157589 | None:intergenic | 35.0% |
| ! | AACCGAACCTCTAAAAACTA+TGG | + | chr7_1:16157571-16157590 | None:intergenic | 35.0% |
| !! | TAGTTTTTAGAGGTTCGGTT+CGG | - | chr7_1:16157571-16157590 | Msa1011580:intron | 35.0% |
| CTACTAGACATCATTTGTCA+GGG | + | chr7_1:16157626-16157645 | None:intergenic | 35.0% | |
| ACTACTAGACATCATTTGTC+AGG | + | chr7_1:16157627-16157646 | None:intergenic | 35.0% | |
| TGACACTTGTTCCTAAGTTT+AGG | + | chr7_1:16158158-16158177 | None:intergenic | 35.0% | |
| AAATGCAAAACATGGTTGCA+GGG | - | chr7_1:16158256-16158275 | Msa1011580:intron | 35.0% | |
| AACAAAGTCACAACCTGAAA+GGG | + | chr7_1:16158348-16158367 | None:intergenic | 35.0% | |
| ATGTTTATGGCTGAAATGGT+TGG | + | chr7_1:16158390-16158409 | None:intergenic | 35.0% | |
| AACCATTTCAGCCATAAACA+TGG | - | chr7_1:16158389-16158408 | Msa1011580:intron | 35.0% | |
| ACCATTTCAGCCATAAACAT+GGG | - | chr7_1:16158390-16158409 | Msa1011580:intron | 35.0% | |
| ATTGTCTCCTTGAAGTCTAA+TGG | - | chr7_1:16158479-16158498 | Msa1011580:intron | 35.0% | |
| GTTCTTCAAGAGGAAAATGA+CGG | - | chr7_1:16158512-16158531 | Msa1011580:intron | 35.0% | |
| GAGTTGCTAAAGTAAACTGT+TGG | + | chr7_1:16158694-16158713 | None:intergenic | 35.0% | |
| AAGAACGAAATGGAATCACA+AGG | + | chr7_1:16158730-16158749 | None:intergenic | 35.0% | |
| !! | ATGCAAATTTCTAGCTTGAG+AGG | + | chr7_1:16158758-16158777 | None:intergenic | 35.0% |
| TTGGATGTTGTAATTGGCAA+GGG | + | chr7_1:16159307-16159326 | None:intergenic | 35.0% | |
| CTTCTCTTGGATGTTGTAAT+TGG | + | chr7_1:16159313-16159332 | None:intergenic | 35.0% | |
| TTGGATTTAGTAATCGGTGA+TGG | + | chr7_1:16159387-16159406 | None:intergenic | 35.0% | |
| CAGCTCTTGGATTTAGTAAT+CGG | + | chr7_1:16159393-16159412 | None:intergenic | 35.0% | |
| AGTCAACTGCAATGAATTCA+TGG | - | chr7_1:16159721-16159740 | Msa1011580:CDS | 35.0% | |
| TGGTGAAATCAAACCAAAAC+AGG | - | chr7_1:16159741-16159760 | Msa1011580:CDS | 35.0% | |
| ! | GTGACATTATGGAATTTTCG+TGG | - | chr7_1:16159878-16159897 | Msa1011580:CDS | 35.0% |
| !! | TATTGCGATTTTGAGCATTG+AGG | - | chr7_1:16160076-16160095 | Msa1011580:CDS | 35.0% |
| GAGTAGCTAAACCTTTAGTT+TGG | - | chr7_1:16160201-16160220 | Msa1011580:CDS | 35.0% | |
| TCATGGCTTAACCAAACTAA+AGG | + | chr7_1:16160215-16160234 | None:intergenic | 35.0% | |
| ACTCTCAATTTCCTATCTCT+AGG | + | chr7_1:16160463-16160482 | None:intergenic | 35.0% | |
| TAGTAATTGAGAGTAGAGAG+AGG | - | chr7_1:16160625-16160644 | Msa1011580:intron | 35.0% | |
| !! | TAAAGCAATAGCGGATTCAT+CGG | - | chr7_1:16160661-16160680 | Msa1011580:intron | 35.0% |
| TGAAATAATTCAACAGTCCC+CGG | + | chr7_1:16160918-16160937 | None:intergenic | 35.0% | |
| !!! | GGTATTTTGCTGTTTATACG+AGG | - | chr7_1:16161061-16161080 | Msa1011580:intron | 35.0% |
| AGTACGATCCAGAAATAGAA+AGG | - | chr7_1:16161107-16161126 | Msa1011580:intron | 35.0% | |
| GATTCAGTAATAATCTGCTC+CGG | + | chr7_1:16161211-16161230 | None:intergenic | 35.0% | |
| TCTTGATGTAAAAAGCAACG+GGG | + | chr7_1:16161333-16161352 | None:intergenic | 35.0% | |
| GTCTTGATGTAAAAAGCAAC+GGG | + | chr7_1:16161334-16161353 | None:intergenic | 35.0% | |
| GGTCTTGATGTAAAAAGCAA+CGG | + | chr7_1:16161335-16161354 | None:intergenic | 35.0% | |
| TGGTTGTTAACTATACCCAA+TGG | - | chr7_1:16161532-16161551 | Msa1011580:intron | 35.0% | |
| GGTTGTTAACTATACCCAAT+GGG | - | chr7_1:16161533-16161552 | Msa1011580:intron | 35.0% | |
| GAGATTTCGAATTTCAAGCA+AGG | - | chr7_1:16161637-16161656 | Msa1011580:intron | 35.0% | |
| GATTTCGAATTTCAAGCAAG+GGG | - | chr7_1:16161639-16161658 | Msa1011580:intron | 35.0% | |
| ATGAGTCACTATATGATGCT+TGG | - | chr7_1:16161665-16161684 | Msa1011580:intron | 35.0% | |
| TGAGTCACTATATGATGCTT+GGG | - | chr7_1:16161666-16161685 | Msa1011580:intron | 35.0% | |
| TCTCAGTGAACTCATGATTA+GGG | + | chr7_1:16161720-16161739 | None:intergenic | 35.0% | |
| TTCTCAGTGAACTCATGATT+AGG | + | chr7_1:16161721-16161740 | None:intergenic | 35.0% | |
| TCTAAGAACATCCTAGTGTT+AGG | + | chr7_1:16161778-16161797 | None:intergenic | 35.0% | |
| ! | TCAAGCTCTAATCGAAAACA+TGG | - | chr7_1:16161843-16161862 | Msa1011580:exon | 35.0% |
| GAAGCGAAAAAGAAAGAAAG+AGG | - | chr7_1:16161886-16161905 | Msa1011580:intron | 35.0% | |
| !! | AAGAAAGAAAGAGGAGTGTT+TGG | - | chr7_1:16161895-16161914 | Msa1011580:intron | 35.0% |
| !! | AGAAAGAAAGAGGAGTGTTT+GGG | - | chr7_1:16161896-16161915 | Msa1011580:intron | 35.0% |
| ! | TTGGTCTTTCGTATAGTTGG+TGG | + | chr7_1:16156409-16156428 | None:intergenic | 40.0% |
| AGAAGTAGTAGAATCCTTGG+TGG | + | chr7_1:16156448-16156467 | None:intergenic | 40.0% | |
| CTGAGAAGTAGTAGAATCCT+TGG | + | chr7_1:16156451-16156470 | None:intergenic | 40.0% | |
| CAAATGCATACCTGAAAGAC+AGG | + | chr7_1:16156676-16156695 | None:intergenic | 40.0% | |
| ! | GTAATCCGATTGGCTAATAG+TGG | - | chr7_1:16156911-16156930 | Msa1011580:CDS | 40.0% |
| GATCACCACTATTAGCCAAT+CGG | + | chr7_1:16156919-16156938 | None:intergenic | 40.0% | |
| ATTGGCTAATAGTGGTGATC+TGG | - | chr7_1:16156919-16156938 | Msa1011580:CDS | 40.0% | |
| !! | CAAAACTGACTTGTAAGGTG+AGG | - | chr7_1:16157020-16157039 | Msa1011580:CDS | 40.0% |
| ! | TTTTCCCTCCTCATCTTATG+CGG | - | chr7_1:16157223-16157242 | Msa1011580:CDS | 40.0% |
| AGCCTCCTATTTCATAGGAA+CGG | + | chr7_1:16157344-16157363 | None:intergenic | 40.0% | |
| TTCCTATGAAATAGGAGGCT+CGG | - | chr7_1:16157344-16157363 | Msa1011580:CDS | 40.0% | |
| !! | GCCCATAGTTTTTAGAGGTT+CGG | - | chr7_1:16157566-16157585 | Msa1011580:intron | 40.0% |
| CAAACAAGTCTTTGCCTCTA+AGG | + | chr7_1:16157727-16157746 | None:intergenic | 40.0% | |
| CAGTATAGCAGGTAGCAATA+TGG | + | chr7_1:16157894-16157913 | None:intergenic | 40.0% | |
| ! | CCATGTTTTGCATTTGGACA+TGG | + | chr7_1:16158251-16158270 | None:intergenic | 40.0% |
| CCATGTCCAAATGCAAAACA+TGG | - | chr7_1:16158248-16158267 | Msa1011580:intron | 40.0% | |
| ! | CTGCAACCATGTTTTGCATT+TGG | + | chr7_1:16158257-16158276 | None:intergenic | 40.0% |
| CAAATGCAAAACATGGTTGC+AGG | - | chr7_1:16158255-16158274 | Msa1011580:intron | 40.0% | |
| AGGGAGAAAATGAGTTACAC+TGG | - | chr7_1:16158275-16158294 | Msa1011580:intron | 40.0% | |
| ACAAAGTCACAACCTGAAAG+GGG | + | chr7_1:16158347-16158366 | None:intergenic | 40.0% | |
| CAACAAAGTCACAACCTGAA+AGG | + | chr7_1:16158349-16158368 | None:intergenic | 40.0% | |
| CCATTTCAGCCATAAACATG+GGG | - | chr7_1:16158391-16158410 | Msa1011580:intron | 40.0% | |
| CATTTCAGCCATAAACATGG+GGG | - | chr7_1:16158392-16158411 | Msa1011580:intron | 40.0% | |
| TTTGAGAACCCCCATGTTTA+TGG | + | chr7_1:16158403-16158422 | None:intergenic | 40.0% | |
| AGACTTCAAGGAGACAATGA+AGG | + | chr7_1:16158477-16158496 | None:intergenic | 40.0% | |
| TGGAACCATTGTTCTTCAAG+AGG | - | chr7_1:16158502-16158521 | Msa1011580:intron | 40.0% | |
| ! | GCAGTCAATATTTGCTGCAT+TGG | - | chr7_1:16158578-16158597 | Msa1011580:CDS | 40.0% |
| AGAGGTTCAGAAGAACGAAA+TGG | + | chr7_1:16158740-16158759 | None:intergenic | 40.0% | |
| AGAAATTTGCATAACCCCCA+TGG | - | chr7_1:16158766-16158785 | Msa1011580:intron | 40.0% | |
| AGCAAAGAAAAGGAGATAGG+CGG | + | chr7_1:16158794-16158813 | None:intergenic | 40.0% | |
| ! | TTTTGACAAGACACAGTACC+AGG | - | chr7_1:16159230-16159249 | Msa1011580:CDS | 40.0% |
| ATGCAACGTCTGATCTTTGA+TGG | - | chr7_1:16159258-16159277 | Msa1011580:CDS | 40.0% | |
| CTTGGATGTTGTAATTGGCA+AGG | + | chr7_1:16159308-16159327 | None:intergenic | 40.0% | |
| ! | TTTAGTAATCGGTGATGGTG+CGG | + | chr7_1:16159382-16159401 | None:intergenic | 40.0% |
| CGATTACTAAATCCAAGAGC+TGG | - | chr7_1:16159391-16159410 | Msa1011580:intron | 40.0% | |
| ! | TTGAGCTCTTGTTCCTGTTT+TGG | + | chr7_1:16159757-16159776 | None:intergenic | 40.0% |
| TGGCACGTTTGCTTAAACTT+GGG | + | chr7_1:16159813-16159832 | None:intergenic | 40.0% | |
| TTGAAACGATGTGGAGTTCA+TGG | - | chr7_1:16159856-16159875 | Msa1011580:CDS | 40.0% | |
| TGGAGTTCATGGTGACATTA+TGG | - | chr7_1:16159867-16159886 | Msa1011580:CDS | 40.0% | |
| ATGCCTTCATTAATCTGACG+TGG | + | chr7_1:16159950-16159969 | None:intergenic | 40.0% | |
| TAAATATCCAGCTGCTAGCA+AGG | - | chr7_1:16160036-16160055 | Msa1011580:CDS | 40.0% | |
| AAATATCCAGCTGCTAGCAA+GGG | - | chr7_1:16160037-16160056 | Msa1011580:CDS | 40.0% | |
| !! | GAGTGTTGGTATGAGATTCA+GGG | + | chr7_1:16160125-16160144 | None:intergenic | 40.0% |
| AAATCTAACCAACGGAGTGT+TGG | + | chr7_1:16160139-16160158 | None:intergenic | 40.0% | |
| CATGTGATTGCAAGAAGCTA+GGG | + | chr7_1:16160359-16160378 | None:intergenic | 40.0% | |
| TCATGTGATTGCAAGAAGCT+AGG | + | chr7_1:16160360-16160379 | None:intergenic | 40.0% | |
| AACACTAGGAACCTAGAGAT+AGG | - | chr7_1:16160449-16160468 | Msa1011580:intron | 40.0% | |
| AATAACCGTGGAATCGATGT+TGG | + | chr7_1:16160507-16160526 | None:intergenic | 40.0% | |
| AGTTTGTATTTGGTTGCCCT+AGG | + | chr7_1:16160765-16160784 | None:intergenic | 40.0% | |
| TAGCAAGCTCGTTATACGTT+AGG | + | chr7_1:16160796-16160815 | None:intergenic | 40.0% | |
| TGGATCGTACTCTAAGTTGT+CGG | + | chr7_1:16161098-16161117 | None:intergenic | 40.0% | |
| CTTGCAGTCCTTTCTATTTC+TGG | + | chr7_1:16161118-16161137 | None:intergenic | 40.0% | |
| ATTGAGACAACCGTTGCAAA+CGG | + | chr7_1:16161159-16161178 | None:intergenic | 40.0% | |
| GTAATAATCTGCTCCGGTAT+TGG | + | chr7_1:16161205-16161224 | None:intergenic | 40.0% | |
| AACCCATAGTCTCCCAATTT+CGG | + | chr7_1:16161265-16161284 | None:intergenic | 40.0% | |
| ! | GTTAGCTGGTTGAAAAGTGT+GGG | + | chr7_1:16161311-16161330 | None:intergenic | 40.0% |
| TTCTCTCAAACCGTTGAGAA+CGG | + | chr7_1:16161359-16161378 | None:intergenic | 40.0% | |
| ! | CTTCTTTTGTGCATCAGTCA+CGG | + | chr7_1:16161470-16161489 | None:intergenic | 40.0% |
| !!! | CAACCAATTTTTTGCTCTGC+CGG | + | chr7_1:16161518-16161537 | None:intergenic | 40.0% |
| TAACTCCTCCCATGTTTGAA+CGG | + | chr7_1:16161560-16161579 | None:intergenic | 40.0% | |
| GAGTCACTATATGATGCTTG+GGG | - | chr7_1:16161667-16161686 | Msa1011580:intron | 40.0% | |
| AGTCACTATATGATGCTTGG+GGG | - | chr7_1:16161668-16161687 | Msa1011580:intron | 40.0% | |
| TACCTCCAAATCTTCACTGA+GGG | - | chr7_1:16161745-16161764 | Msa1011580:intron | 40.0% | |
| !! | GAAAGAAAGAGGAGTGTTTG+GGG | - | chr7_1:16161897-16161916 | Msa1011580:intron | 40.0% |
| TTTGTTTGTTCATGGCTGCT+TGG | + | chr7_1:16161951-16161970 | None:intergenic | 40.0% | |
| AGAGTTTCAGAGTTTCACCT+TGG | - | chr7_1:16161987-16162006 | Msa1011580:intron | 40.0% | |
| GCAATCAGGTGTGATTTATG+TGG | - | chr7_1:16162033-16162052 | Msa1011580:five_prime_UTR | 40.0% | |
| AGGTGTGATTTATGTGGTGA+GGG | - | chr7_1:16162039-16162058 | Msa1011580:five_prime_UTR | 40.0% | |
| !! | TCGTATAGTTGGTGGACGTT+TGG | + | chr7_1:16156401-16156420 | None:intergenic | 45.0% |
| ATCAACACATCAAGCCACCA+AGG | - | chr7_1:16156431-16156450 | Msa1011580:CDS | 45.0% | |
| CATCTTGAGCGTAATCCGAT+TGG | - | chr7_1:16156901-16156920 | Msa1011580:CDS | 45.0% | |
| AATAGTGGTGATCTGGTAGC+AGG | - | chr7_1:16156926-16156945 | Msa1011580:CDS | 45.0% | |
| !!! | GGTGGTCCAACGGATTTTTT+TGG | - | chr7_1:16156947-16156966 | Msa1011580:CDS | 45.0% |
| TAAGCCGCATAAGATGAGGA+GGG | + | chr7_1:16157230-16157249 | None:intergenic | 45.0% | |
| CTACTAAGCCGCATAAGATG+AGG | + | chr7_1:16157234-16157253 | None:intergenic | 45.0% | |
| CTCATCTTATGCGGCTTAGT+AGG | - | chr7_1:16157232-16157251 | Msa1011580:CDS | 45.0% | |
| AACCGAGCCTCCTATTTCAT+AGG | + | chr7_1:16157349-16157368 | None:intergenic | 45.0% | |
| TAGACATCATTTGTCAGGGC+CGG | + | chr7_1:16157622-16157641 | None:intergenic | 45.0% | |
| CTACCTGCTGTCCTAAACTT+AGG | - | chr7_1:16158144-16158163 | Msa1011580:intron | 45.0% | |
| ! | GTTCCTAAGTTTAGGACAGC+AGG | + | chr7_1:16158150-16158169 | None:intergenic | 45.0% |
| CCCCATGTTTATGGCTGAAA+TGG | + | chr7_1:16158394-16158413 | None:intergenic | 45.0% | |
| GTCTCCTTGAAGTCTAATGG+TGG | - | chr7_1:16158482-16158501 | Msa1011580:intron | 45.0% | |
| GGTTCCACCATTAGACTTCA+AGG | + | chr7_1:16158489-16158508 | None:intergenic | 45.0% | |
| ! | TGCATTGGTCCTAACTCTTC+TGG | - | chr7_1:16158593-16158612 | Msa1011580:CDS | 45.0% |
| ! | GCATTGGTCCTAACTCTTCT+GGG | - | chr7_1:16158594-16158613 | Msa1011580:CDS | 45.0% |
| TCTGAACTCTTAACCCTCAG+GGG | + | chr7_1:16159183-16159202 | None:intergenic | 45.0% | |
| GTCTGAACTCTTAACCCTCA+GGG | + | chr7_1:16159184-16159203 | None:intergenic | 45.0% | |
| TGTCTGAACTCTTAACCCTC+AGG | + | chr7_1:16159185-16159204 | None:intergenic | 45.0% | |
| AGACACAGTAGCCAATGTGA+AGG | - | chr7_1:16159200-16159219 | Msa1011580:intron | 45.0% | |
| TGTTGTAATTGGCAAGGGTC+AGG | + | chr7_1:16159302-16159321 | None:intergenic | 45.0% | |
| GTGGCACGTTTGCTTAAACT+TGG | + | chr7_1:16159814-16159833 | None:intergenic | 45.0% | |
| TTTAAGCAAACGTGCCACGT+TGG | - | chr7_1:16159816-16159835 | Msa1011580:CDS | 45.0% | |
| GCAAGTTCATCAACCAATCG+TGG | + | chr7_1:16159925-16159944 | None:intergenic | 45.0% | |
| CTGCCACGTCAGATTAATGA+AGG | - | chr7_1:16159944-16159963 | Msa1011580:CDS | 45.0% | |
| CCATCATCGTGCAATGATAC+GGG | + | chr7_1:16159987-16160006 | None:intergenic | 45.0% | |
| CCCATCATCGTGCAATGATA+CGG | + | chr7_1:16159988-16160007 | None:intergenic | 45.0% | |
| CCGTATCATTGCACGATGAT+GGG | - | chr7_1:16159985-16160004 | Msa1011580:CDS | 45.0% | |
| !!! | GCGATTTTGAGCATTGAGGA+CGG | - | chr7_1:16160080-16160099 | Msa1011580:CDS | 45.0% |
| !! | GGAGTGTTGGTATGAGATTC+AGG | + | chr7_1:16160126-16160145 | None:intergenic | 45.0% |
| ATCTCATACCAACACTCCGT+TGG | - | chr7_1:16160128-16160147 | Msa1011580:CDS | 45.0% | |
| !! | ACGTTCCAACATCGATTCCA+CGG | - | chr7_1:16160499-16160518 | Msa1011580:intron | 45.0% |
| AAAACCGAACTTCTCTGCCT+AGG | - | chr7_1:16160745-16160764 | Msa1011580:intron | 45.0% | |
| AAACCGAACTTCTCTGCCTA+GGG | - | chr7_1:16160746-16160765 | Msa1011580:intron | 45.0% | |
| ! | TGTATCGTGCAGTGCTACTA+AGG | - | chr7_1:16161040-16161059 | Msa1011580:intron | 45.0% |
| !! | AAAGGACTGCAAGAGCACTT+CGG | - | chr7_1:16161125-16161144 | Msa1011580:intron | 45.0% |
| TTGTCTCAATCCGTTCCACT+GGG | - | chr7_1:16161169-16161188 | Msa1011580:intron | 45.0% | |
| ! | AATTTCGGTCTTGGTGGTAC+AGG | + | chr7_1:16161250-16161269 | None:intergenic | 45.0% |
| TGTACCACCAAGACCGAAAT+TGG | - | chr7_1:16161249-16161268 | Msa1011580:intron | 45.0% | |
| GTACCACCAAGACCGAAATT+GGG | - | chr7_1:16161250-16161269 | Msa1011580:intron | 45.0% | |
| TAGTCTCCCAATTTCGGTCT+TGG | + | chr7_1:16161259-16161278 | None:intergenic | 45.0% | |
| AGACCGAAATTGGGAGACTA+TGG | - | chr7_1:16161259-16161278 | Msa1011580:intron | 45.0% | |
| GACCGAAATTGGGAGACTAT+GGG | - | chr7_1:16161260-16161279 | Msa1011580:intron | 45.0% | |
| !! | TATGGGTTAGCTACTCATCG+CGG | - | chr7_1:16161277-16161296 | Msa1011580:intron | 45.0% |
| ! | GGTTAGCTGGTTGAAAAGTG+TGG | + | chr7_1:16161312-16161331 | None:intergenic | 45.0% |
| ! | TAAAAAGCAACGGGGTTAGC+TGG | + | chr7_1:16161325-16161344 | None:intergenic | 45.0% |
| ATCAAGACCACCGTTCTCAA+CGG | - | chr7_1:16161346-16161365 | Msa1011580:intron | 45.0% | |
| AGCAGCTCAAGTGTTCATGT+GGG | + | chr7_1:16161411-16161430 | None:intergenic | 45.0% | |
| AAGCAGCTCAAGTGTTCATG+TGG | + | chr7_1:16161412-16161431 | None:intergenic | 45.0% | |
| CTGATGCACAAAAGAAGCTC+AGG | - | chr7_1:16161473-16161492 | Msa1011580:intron | 45.0% | |
| !!! | ATTTTTTGCTCTGCCGGTCA+AGG | + | chr7_1:16161512-16161531 | None:intergenic | 45.0% |
| TGACCGGCAGAGCAAAAAAT+TGG | - | chr7_1:16161512-16161531 | Msa1011580:intron | 45.0% | |
| CATGTTTGAACGGTCCCATT+GGG | + | chr7_1:16161550-16161569 | None:intergenic | 45.0% | |
| CAATGGGACCGTTCAAACAT+GGG | - | chr7_1:16161549-16161568 | Msa1011580:intron | 45.0% | |
| ACATCGGGAAATACTTCTCG+AGG | + | chr7_1:16161594-16161613 | None:intergenic | 45.0% | |
| GTACCTCCAAATCTTCACTG+AGG | - | chr7_1:16161744-16161763 | Msa1011580:intron | 45.0% | |
| ACCTCCAAATCTTCACTGAG+GGG | - | chr7_1:16161746-16161765 | Msa1011580:intron | 45.0% | |
| GATGTTCTTAGATGCTTCCG+CGG | - | chr7_1:16161786-16161805 | Msa1011580:CDS | 45.0% | |
| ATGTTCTTAGATGCTTCCGC+GGG | - | chr7_1:16161787-16161806 | Msa1011580:CDS | 45.0% | |
| TTTGTTCATGGCTGCTTGGT+TGG | + | chr7_1:16161947-16161966 | None:intergenic | 45.0% | |
| CAGGTGTGATTTATGTGGTG+AGG | - | chr7_1:16162038-16162057 | Msa1011580:five_prime_UTR | 45.0% | |
| GTTGTGCGCGAAGTGTATAG+CGG | + | chr7_1:16156831-16156850 | None:intergenic | 50.0% | |
| GCGCACAACGTGAAACACAA+GGG | - | chr7_1:16156842-16156861 | Msa1011580:CDS | 50.0% | |
| CGGATTACGCTCAAGATGTC+CGG | + | chr7_1:16156899-16156918 | None:intergenic | 50.0% | |
| CTAAGCCGCATAAGATGAGG+AGG | + | chr7_1:16157231-16157250 | None:intergenic | 50.0% | |
| CAGGGCCGTTCCTATGAAAT+AGG | - | chr7_1:16157336-16157355 | Msa1011580:CDS | 50.0% | |
| GGCCGTTCCTATGAAATAGG+AGG | - | chr7_1:16157339-16157358 | Msa1011580:CDS | 50.0% | |
| CCTGAAAGGGGACAGTAACA+TGG | + | chr7_1:16158335-16158354 | None:intergenic | 50.0% | |
| CCATGTTACTGTCCCCTTTC+AGG | - | chr7_1:16158332-16158351 | Msa1011580:intron | 50.0% | |
| TACTCGGACCCAGAAGAGTT+AGG | + | chr7_1:16158605-16158624 | None:intergenic | 50.0% | |
| AAGGAGATAGGCGGTACCAT+GGG | + | chr7_1:16158785-16158804 | None:intergenic | 50.0% | |
| AAAGGAGATAGGCGGTACCA+TGG | + | chr7_1:16158786-16158805 | None:intergenic | 50.0% | |
| GGGGATCATCTTCGTAGTTG+GGG | + | chr7_1:16159163-16159182 | None:intergenic | 50.0% | |
| GGGGGATCATCTTCGTAGTT+GGG | + | chr7_1:16159164-16159183 | None:intergenic | 50.0% | |
| AGGGGGATCATCTTCGTAGT+TGG | + | chr7_1:16159165-16159184 | None:intergenic | 50.0% | |
| TACGAAGATGATCCCCCTGA+GGG | - | chr7_1:16159167-16159186 | Msa1011580:intron | 50.0% | |
| CTGAACTCTTAACCCTCAGG+GGG | + | chr7_1:16159182-16159201 | None:intergenic | 50.0% | |
| TCATCTAGTCCCCAATGAGG+CGG | + | chr7_1:16159356-16159375 | None:intergenic | 50.0% | |
| TGGTCATCTAGTCCCCAATG+AGG | + | chr7_1:16159359-16159378 | None:intergenic | 50.0% | |
| AACGGCTGCAGATGATAAGG+TGG | + | chr7_1:16159424-16159443 | None:intergenic | 50.0% | |
| ACCTTATCATCTGCAGCCGT+TGG | - | chr7_1:16159423-16159442 | Msa1011580:intron | 50.0% | |
| GAAGACAATCGCCCTATGAG+TGG | - | chr7_1:16159459-16159478 | Msa1011580:intron | 50.0% | |
| !! | AAACGTGCCACGTTGGTAAC+TGG | - | chr7_1:16159823-16159842 | Msa1011580:CDS | 50.0% |
| AAAACGCAACGTGCCACGAT+TGG | - | chr7_1:16159909-16159928 | Msa1011580:CDS | 50.0% | |
| CCCGTATCATTGCACGATGA+TGG | - | chr7_1:16159984-16160003 | Msa1011580:CDS | 50.0% | |
| !!! | TTTTGAGCATTGAGGACGGC+AGG | - | chr7_1:16160084-16160103 | Msa1011580:CDS | 50.0% |
| ! | GAGATTCAGGGCTTGTTCCT+TGG | + | chr7_1:16160113-16160132 | None:intergenic | 50.0% |
| TTGCCCTAGGCAGAGAAGTT+CGG | + | chr7_1:16160752-16160771 | None:intergenic | 50.0% | |
| !!! | CAAGTTTTTGGCGCCATAGC+CGG | - | chr7_1:16160896-16160915 | Msa1011580:intron | 50.0% |
| !!! | AAGTTTTTGGCGCCATAGCC+GGG | - | chr7_1:16160897-16160916 | Msa1011580:intron | 50.0% |
| AATTCAACAGTCCCCGGCTA+TGG | + | chr7_1:16160912-16160931 | None:intergenic | 50.0% | |
| GGAAAGCTGTCCGTTTGCAA+CGG | - | chr7_1:16161146-16161165 | Msa1011580:intron | 50.0% | |
| GTTGTCTCAATCCGTTCCAC+TGG | - | chr7_1:16161168-16161187 | Msa1011580:intron | 50.0% | |
| AATCCGTTCCACTGGGTGTA+CGG | - | chr7_1:16161176-16161195 | Msa1011580:intron | 50.0% | |
| TCTCCCAATTTCGGTCTTGG+TGG | + | chr7_1:16161256-16161275 | None:intergenic | 50.0% | |
| TCTCAAACCGTTGAGAACGG+TGG | + | chr7_1:16161356-16161375 | None:intergenic | 50.0% | |
| ! | CTTTTGTGCATCAGTCACGG+TGG | + | chr7_1:16161467-16161486 | None:intergenic | 50.0% |
| CTATTCCCCTTCACCTTGAC+CGG | - | chr7_1:16161496-16161515 | Msa1011580:intron | 50.0% | |
| CCATGTTTGAACGGTCCCAT+TGG | + | chr7_1:16161551-16161570 | None:intergenic | 50.0% | |
| CCAATGGGACCGTTCAAACA+TGG | - | chr7_1:16161548-16161567 | Msa1011580:intron | 50.0% | |
| CCTCCAAATCTTCACTGAGG+GGG | - | chr7_1:16161747-16161766 | Msa1011580:intron | 50.0% | |
| TCACCCCCTCAGTGAAGATT+TGG | + | chr7_1:16161753-16161772 | None:intergenic | 50.0% | |
| ACTCTTAAGACTACCTCCCG+CGG | + | chr7_1:16161806-16161825 | None:intergenic | 50.0% | |
| !! | CTGTTGAGGCTTGTTAGCCA+AGG | + | chr7_1:16162007-16162026 | None:intergenic | 50.0% |
| CTTGGCTAACAAGCCTCAAC+AGG | - | chr7_1:16162005-16162024 | Msa1011580:five_prime_UTR | 50.0% | |
| TAACAAGCCTCAACAGGTGG+CGG | - | chr7_1:16162011-16162030 | Msa1011580:five_prime_UTR | 50.0% | |
| CGCGCACAACGTGAAACACA+AGG | - | chr7_1:16156841-16156860 | Msa1011580:CDS | 55.0% | |
| AGATGTCCGGTTCACGACGT+GGG | + | chr7_1:16156886-16156905 | None:intergenic | 55.0% | |
| AAGATGTCCGGTTCACGACG+TGG | + | chr7_1:16156887-16156906 | None:intergenic | 55.0% | |
| AGTGGTGATCTGGTAGCAGG+TGG | - | chr7_1:16156929-16156948 | Msa1011580:CDS | 55.0% | |
| TCTGGTAGCAGGTGGTCCAA+CGG | - | chr7_1:16156937-16156956 | Msa1011580:CDS | 55.0% | |
| AGCGATTCCTACACTCCCCA+AGG | - | chr7_1:16157595-16157614 | Msa1011580:intron | 55.0% | |
| TTCCTACACTCCCCAAGGTC+CGG | - | chr7_1:16157600-16157619 | Msa1011580:intron | 55.0% | |
| ATTTGTCAGGGCCGGACCTT+GGG | + | chr7_1:16157614-16157633 | None:intergenic | 55.0% | |
| AGGAGATAGGCGGTACCATG+GGG | + | chr7_1:16158784-16158803 | None:intergenic | 55.0% | |
| CTACGAAGATGATCCCCCTG+AGG | - | chr7_1:16159166-16159185 | Msa1011580:intron | 55.0% | |
| TCAGACGTTGCATGTGCACC+TGG | + | chr7_1:16159251-16159270 | None:intergenic | 55.0% | |
| ! | GGTGGAGGGTTGACTTCTCT+TGG | + | chr7_1:16159326-16159345 | None:intergenic | 55.0% |
| ! | AGTAATCGGTGATGGTGCGG+TGG | + | chr7_1:16159379-16159398 | None:intergenic | 55.0% |
| GGTGGATGATTGCCAGCTCT+TGG | + | chr7_1:16159406-16159425 | None:intergenic | 55.0% | |
| GCCAACGGCTGCAGATGATA+AGG | + | chr7_1:16159427-16159446 | None:intergenic | 55.0% | |
| CGTGGCACGTTGAAACGATG+TGG | - | chr7_1:16159847-16159866 | Msa1011580:CDS | 55.0% | |
| !! | ATGAAGGCATCGTGCCACGA+TGG | - | chr7_1:16159960-16159979 | Msa1011580:CDS | 55.0% |
| GCAATGATACGGGACCATCG+TGG | + | chr7_1:16159977-16159996 | None:intergenic | 55.0% | |
| TCCAGCTGCTAGCAAGGGTT+AGG | - | chr7_1:16160042-16160061 | Msa1011580:CDS | 55.0% | |
| CCAGCTGCTAGCAAGGGTTA+GGG | - | chr7_1:16160043-16160062 | Msa1011580:CDS | 55.0% | |
| !!! | AGTTTTTGGCGCCATAGCCG+GGG | - | chr7_1:16160898-16160917 | Msa1011580:intron | 55.0% |
| ATCCGTTCCACTGGGTGTAC+GGG | - | chr7_1:16161177-16161196 | Msa1011580:intron | 55.0% | |
| TTCCCGTACACCCAGTGGAA+CGG | + | chr7_1:16161182-16161201 | None:intergenic | 55.0% | |
| ! | ATTGGTTCCCGTACACCCAG+TGG | + | chr7_1:16161187-16161206 | None:intergenic | 55.0% |
| GGGTGTACGGGAACCAATAC+CGG | - | chr7_1:16161189-16161208 | Msa1011580:intron | 55.0% | |
| TGGGACCGTTCAAACATGGG+AGG | - | chr7_1:16161552-16161571 | Msa1011580:intron | 55.0% | |
| CCCCCTCAGTGAAGATTTGG+AGG | + | chr7_1:16161750-16161769 | None:intergenic | 55.0% | |
| AGGGGGTGACACCTAACACT+AGG | - | chr7_1:16161764-16161783 | Msa1011580:intron | 55.0% | |
| TTCTTAGATGCTTCCGCGGG+AGG | - | chr7_1:16161790-16161809 | Msa1011580:CDS | 55.0% | |
| GGCTAACAAGCCTCAACAGG+TGG | - | chr7_1:16162008-16162027 | Msa1011580:five_prime_UTR | 55.0% | |
| CACAACCCCACGTCGTGAAC+CGG | - | chr7_1:16156877-16156896 | Msa1011580:CDS | 60.0% | |
| GATGTCCGGTTCACGACGTG+GGG | + | chr7_1:16156885-16156904 | None:intergenic | 60.0% | |
| TTTGTCAGGGCCGGACCTTG+GGG | + | chr7_1:16157613-16157632 | None:intergenic | 60.0% | |
| CATTTGTCAGGGCCGGACCT+TGG | + | chr7_1:16157615-16157634 | None:intergenic | 60.0% | |
| GGAGATAGGCGGTACCATGG+GGG | + | chr7_1:16158783-16158802 | None:intergenic | 60.0% | |
| ACCTCGTCCTCCGCCTCATT+GGG | - | chr7_1:16159343-16159362 | Msa1011580:intron | 60.0% | |
| TCTAGTCCCCAATGAGGCGG+AGG | + | chr7_1:16159353-16159372 | None:intergenic | 60.0% | |
| !! | GCCACGTTGGTAACTGGTCG+TGG | - | chr7_1:16159829-16159848 | Msa1011580:CDS | 60.0% |
| GCCACGACCAGTTACCAACG+TGG | + | chr7_1:16159833-16159852 | None:intergenic | 60.0% | |
| CCCTAACCCTTGCTAGCAGC+TGG | + | chr7_1:16160046-16160065 | None:intergenic | 60.0% | |
| TTGAGGACGGCAGGAGACCA+AGG | - | chr7_1:16160093-16160112 | Msa1011580:CDS | 60.0% | |
| TGTGCATCAGTCACGGTGGC+TGG | + | chr7_1:16161463-16161482 | None:intergenic | 60.0% | |
| CTCTGCCGGTCAAGGTGAAG+GGG | + | chr7_1:16161504-16161523 | None:intergenic | 60.0% | |
| GCTCTGCCGGTCAAGGTGAA+GGG | + | chr7_1:16161505-16161524 | None:intergenic | 60.0% | |
| TGCTCTGCCGGTCAAGGTGA+AGG | + | chr7_1:16161506-16161525 | None:intergenic | 60.0% | |
| CTGATTGCCGCCACCTGTTG+AGG | + | chr7_1:16162021-16162040 | None:intergenic | 60.0% | |
| ! | CTCAACAGGTGGCGGCAATC+AGG | - | chr7_1:16162019-16162038 | Msa1011580:five_prime_UTR | 60.0% |
| CAATGAGGCGGAGGACGAGG+TGG | + | chr7_1:16159344-16159363 | None:intergenic | 65.0% | |
| CACCTCGTCCTCCGCCTCAT+TGG | - | chr7_1:16159342-16159361 | Msa1011580:intron | 65.0% | |
| CCTCGTCCTCCGCCTCATTG+GGG | - | chr7_1:16159344-16159363 | Msa1011580:intron | 65.0% | |
| ! | GGCCGGACCTTGGGGAGTGT+AGG | + | chr7_1:16157605-16157624 | None:intergenic | 70.0% |
| GAGGCGGAGGACGAGGTGGA+GGG | + | chr7_1:16159340-16159359 | None:intergenic | 70.0% | |
| TGAGGCGGAGGACGAGGTGG+AGG | + | chr7_1:16159341-16159360 | None:intergenic | 70.0% | |
| CCCCAATGAGGCGGAGGACG+AGG | + | chr7_1:16159347-16159366 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 16156391 | 16162074 | 16156391 | ID=Msa1011580;Name=Msa1011580 |
| chr7_1 | mRNA | 16156391 | 16162074 | 16156391 | ID=Msa1011580-mRNA-1;Parent=Msa1011580;Name=Msa1011580-mRNA-1;_AED=0.83;_eAED=0.83;_QI=84|0.16|0.28|0.28|0.83|0.71|7|0|753 |
| chr7_1 | exon | 16156391 | 16157374 | 16156391 | ID=Msa1011580-mRNA-1:exon:4149;Parent=Msa1011580-mRNA-1 |
| chr7_1 | exon | 16158535 | 16158702 | 16158535 | ID=Msa1011580-mRNA-1:exon:4148;Parent=Msa1011580-mRNA-1 |
| chr7_1 | exon | 16158845 | 16159093 | 16158845 | ID=Msa1011580-mRNA-1:exon:4147;Parent=Msa1011580-mRNA-1 |
| chr7_1 | exon | 16159214 | 16159324 | 16159214 | ID=Msa1011580-mRNA-1:exon:4146;Parent=Msa1011580-mRNA-1 |
| chr7_1 | exon | 16159678 | 16160346 | 16159678 | ID=Msa1011580-mRNA-1:exon:4145;Parent=Msa1011580-mRNA-1 |
| chr7_1 | exon | 16161781 | 16161866 | 16161781 | ID=Msa1011580-mRNA-1:exon:4144;Parent=Msa1011580-mRNA-1 |
| chr7_1 | exon | 16161996 | 16162074 | 16161996 | ID=Msa1011580-mRNA-1:exon:4143;Parent=Msa1011580-mRNA-1 |
| chr7_1 | five_prime_UTR | 16161996 | 16162074 | 16161996 | ID=Msa1011580-mRNA-1:five_prime_utr;Parent=Msa1011580-mRNA-1 |
| chr7_1 | five_prime_UTR | 16161862 | 16161866 | 16161862 | ID=Msa1011580-mRNA-1:five_prime_utr;Parent=Msa1011580-mRNA-1 |
| chr7_1 | CDS | 16161781 | 16161861 | 16161781 | ID=Msa1011580-mRNA-1:cds;Parent=Msa1011580-mRNA-1 |
| chr7_1 | CDS | 16159678 | 16160346 | 16159678 | ID=Msa1011580-mRNA-1:cds;Parent=Msa1011580-mRNA-1 |
| chr7_1 | CDS | 16159214 | 16159324 | 16159214 | ID=Msa1011580-mRNA-1:cds;Parent=Msa1011580-mRNA-1 |
| chr7_1 | CDS | 16158845 | 16159093 | 16158845 | ID=Msa1011580-mRNA-1:cds;Parent=Msa1011580-mRNA-1 |
| chr7_1 | CDS | 16158535 | 16158702 | 16158535 | ID=Msa1011580-mRNA-1:cds;Parent=Msa1011580-mRNA-1 |
| chr7_1 | CDS | 16156391 | 16157374 | 16156391 | ID=Msa1011580-mRNA-1:cds;Parent=Msa1011580-mRNA-1 |
| Gene Sequence |
| Protein sequence |
