Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1142690 | XP_024627046.1 | 85.467 | 289 | 31 | 2 | 1 | 288 | 1 | 279 | 5.14e-173 | 503 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1142690 | sp|Q84K34|SIL10_ARATH | 35.081 | 248 | 147 | 3 | 4 | 247 | 103 | 340 | 1.44e-42 | 159 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1142690 | G7KWT8 | 85.467 | 289 | 31 | 2 | 1 | 288 | 1 | 279 | 2.46e-173 | 503 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1011570 | Msa1142690 | 0.853493 | 2.304324e-61 | -8.615850e-47 |
| Msa1011580 | Msa1142690 | 0.814646 | 1.385719e-51 | -8.615850e-47 |
| Msa1142690 | Msa1364600 | 0.847806 | 9.157404e-60 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1142690 | MtrunA17_Chr7g0223111 | 85.467 | 289 | 31 | 2 | 1 | 288 | 27 | 305 | 8.65e-177 | 503 |
| Msa1142690 | MtrunA17_Chr5g0428191 | 75.972 | 283 | 58 | 1 | 1 | 283 | 1 | 273 | 3.71e-152 | 440 |
| Msa1142690 | MtrunA17_Chr5g0433661 | 71.025 | 283 | 69 | 2 | 3 | 282 | 37 | 309 | 2.94e-136 | 400 |
| Msa1142690 | MtrunA17_Chr1g0169371 | 75.000 | 256 | 53 | 2 | 28 | 283 | 3 | 247 | 6.32e-130 | 382 |
| Msa1142690 | MtrunA17_Chr5g0433731 | 71.642 | 268 | 61 | 4 | 26 | 289 | 8 | 264 | 6.19e-125 | 368 |
| Msa1142690 | MtrunA17_Chr7g0259431 | 71.705 | 258 | 63 | 1 | 25 | 282 | 7 | 254 | 6.31e-125 | 369 |
| Msa1142690 | MtrunA17_Chr5g0433631 | 67.368 | 285 | 80 | 2 | 4 | 285 | 26 | 300 | 7.96e-124 | 369 |
| Msa1142690 | MtrunA17_Chr5g0424971 | 64.605 | 291 | 85 | 4 | 4 | 288 | 11 | 289 | 1.74e-123 | 367 |
| Msa1142690 | MtrunA17_Chr5g0433531 | 66.899 | 287 | 81 | 3 | 1 | 283 | 1 | 277 | 5.06e-122 | 363 |
| Msa1142690 | MtrunA17_Chr5g0433721 | 76.596 | 235 | 45 | 1 | 49 | 283 | 2 | 226 | 4.87e-121 | 358 |
| Msa1142690 | MtrunA17_Chr5g0433411 | 64.437 | 284 | 87 | 3 | 4 | 283 | 26 | 299 | 3.12e-118 | 354 |
| Msa1142690 | MtrunA17_Chr2g0298951 | 58.667 | 300 | 101 | 3 | 27 | 313 | 9 | 298 | 2.56e-112 | 338 |
| Msa1142690 | MtrunA17_Chr5g0433521 | 66.412 | 262 | 75 | 2 | 27 | 285 | 23 | 274 | 7.28e-112 | 337 |
| Msa1142690 | MtrunA17_Chr5g0433541 | 69.748 | 238 | 62 | 1 | 1 | 238 | 1 | 228 | 9.18e-108 | 323 |
| Msa1142690 | MtrunA17_Chr5g0433551 | 69.748 | 238 | 62 | 1 | 1 | 238 | 1 | 228 | 9.18e-108 | 323 |
| Msa1142690 | MtrunA17_Chr2g0298941 | 63.063 | 222 | 67 | 3 | 70 | 286 | 1 | 212 | 2.06e-87 | 271 |
| Msa1142690 | MtrunA17_Chr5g0433881 | 60.236 | 254 | 65 | 7 | 53 | 285 | 17 | 255 | 1.25e-84 | 266 |
| Msa1142690 | MtrunA17_Chr1g0169381 | 72.892 | 166 | 34 | 2 | 1 | 166 | 1 | 155 | 4.15e-80 | 249 |
| Msa1142690 | MtrunA17_Chr4g0028681 | 72.000 | 150 | 31 | 2 | 68 | 216 | 1 | 140 | 4.07e-63 | 204 |
| Msa1142690 | MtrunA17_Chr4g0051351 | 45.415 | 229 | 114 | 3 | 6 | 234 | 92 | 309 | 8.75e-63 | 210 |
| Msa1142690 | MtrunA17_Chr3g0083571 | 26.432 | 227 | 147 | 7 | 5 | 220 | 45 | 262 | 1.57e-19 | 89.7 |
| Msa1142690 | MtrunA17_Chr8g0352701 | 27.727 | 220 | 141 | 6 | 10 | 220 | 52 | 262 | 5.19e-19 | 88.2 |
| Msa1142690 | MtrunA17_Chr7g0275701 | 36.000 | 125 | 78 | 1 | 3 | 125 | 53 | 177 | 1.13e-17 | 84.3 |
| Msa1142690 | MtrunA17_Chr8g0346801 | 25.000 | 272 | 177 | 6 | 3 | 267 | 36 | 287 | 1.19e-17 | 84.3 |
| Msa1142690 | MtrunA17_Chr3g0126851 | 36.752 | 117 | 72 | 1 | 10 | 124 | 59 | 175 | 1.47e-17 | 84.0 |
| Msa1142690 | MtrunA17_Chr1g0175721 | 26.941 | 219 | 142 | 6 | 11 | 220 | 58 | 267 | 6.04e-17 | 82.0 |
| Msa1142690 | MtrunA17_Chr7g0253271 | 25.664 | 226 | 143 | 5 | 27 | 248 | 3 | 207 | 7.17e-17 | 79.7 |
| Msa1142690 | MtrunA17_Chr1g0147041 | 35.833 | 120 | 75 | 1 | 7 | 124 | 64 | 183 | 1.33e-16 | 81.3 |
| Msa1142690 | MtrunA17_Chr7g0258941 | 26.606 | 218 | 142 | 6 | 11 | 219 | 59 | 267 | 3.50e-16 | 79.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1142690 | AT5G37930.1 | 35.081 | 248 | 147 | 3 | 4 | 247 | 103 | 340 | 1.47e-43 | 159 |
| Msa1142690 | AT1G66650.1 | 33.068 | 251 | 155 | 6 | 4 | 247 | 76 | 320 | 3.29e-36 | 138 |
| Msa1142690 | AT5G37870.1 | 31.496 | 254 | 159 | 6 | 6 | 253 | 37 | 281 | 7.23e-36 | 136 |
| Msa1142690 | AT1G66660.2 | 32.283 | 254 | 158 | 6 | 2 | 248 | 94 | 340 | 2.17e-35 | 136 |
| Msa1142690 | AT5G37890.1 | 33.772 | 228 | 139 | 4 | 10 | 234 | 47 | 265 | 9.11e-35 | 133 |
| Msa1142690 | AT1G66620.1 | 32.669 | 251 | 150 | 6 | 5 | 247 | 35 | 274 | 3.51e-34 | 132 |
| Msa1142690 | AT1G66630.1 | 31.061 | 264 | 154 | 5 | 5 | 247 | 40 | 296 | 1.98e-33 | 130 |
| Msa1142690 | AT5G37910.1 | 31.600 | 250 | 153 | 7 | 11 | 256 | 35 | 270 | 1.07e-30 | 121 |
| Msa1142690 | AT5G62800.1 | 31.154 | 260 | 166 | 6 | 11 | 264 | 40 | 292 | 6.74e-28 | 115 |
| Msa1142690 | AT5G62800.2 | 35.751 | 193 | 114 | 4 | 11 | 200 | 40 | 225 | 3.81e-27 | 112 |
| Msa1142690 | AT3G61790.1 | 35.484 | 124 | 78 | 1 | 3 | 124 | 52 | 175 | 5.68e-18 | 85.9 |
| Msa1142690 | AT1G66660.1 | 28.169 | 213 | 137 | 6 | 43 | 248 | 13 | 216 | 6.08e-18 | 83.6 |
| Msa1142690 | AT4G27880.1 | 35.878 | 131 | 77 | 3 | 10 | 133 | 60 | 190 | 7.97e-17 | 82.4 |
| Msa1142690 | AT3G58040.1 | 25.957 | 235 | 155 | 7 | 10 | 234 | 56 | 281 | 5.93e-16 | 79.3 |
| Msa1142690 | AT3G58040.3 | 25.957 | 235 | 155 | 7 | 10 | 234 | 56 | 281 | 5.93e-16 | 79.3 |
| Msa1142690 | AT2G41980.1 | 25.098 | 255 | 166 | 8 | 10 | 248 | 53 | 298 | 7.98e-16 | 79.0 |
| Msa1142690 | AT3G58040.2 | 33.333 | 117 | 76 | 1 | 10 | 124 | 56 | 172 | 2.15e-15 | 76.3 |
| Msa1142690 | AT1G66610.2 | 48.611 | 72 | 37 | 0 | 5 | 76 | 152 | 223 | 2.87e-14 | 73.2 |
| Msa1142690 | AT1G66610.2 | 47.619 | 63 | 33 | 0 | 11 | 73 | 53 | 115 | 5.50e-12 | 66.6 |
| Msa1142690 | AT1G66610.1 | 44.928 | 69 | 38 | 0 | 5 | 73 | 47 | 115 | 2.67e-12 | 68.9 |
| Msa1142690 | AT1G66610.1 | 27.439 | 164 | 102 | 5 | 76 | 234 | 183 | 334 | 3.38e-11 | 65.9 |
| Msa1142690 | AT5G37900.1 | 26.000 | 250 | 139 | 7 | 5 | 248 | 26 | 235 | 2.97e-11 | 64.3 |
Find 133 sgRNAs with CRISPR-Local
Find 563 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCATTGGTCCTAACTCTTC+TGG | 0.129441 | 7_4:+17347087 | Msa1142690:CDS |
| CCATGTTACTGTCCCCTTTC+AGG | 0.141370 | 7_4:+17346826 | Msa1142690:CDS |
| ACATCCTCTTTATTCTTTAT+AGG | 0.168310 | 7_4:-17349453 | None:intergenic |
| TCTAAGTATTCCTGTCTTTC+AGG | 0.178018 | 7_4:+17344317 | Msa1142690:CDS |
| AGTAATTTGTATTCTTATTA+AGG | 0.178934 | 7_4:+17348018 | Msa1142690:CDS |
| TGGAGTTCATGGTGACATTT+TGG | 0.231404 | 7_4:+17348358 | Msa1142690:CDS |
| ACCACTCCCGCTCTATTCTT+AGG | 0.233201 | 7_4:-17349943 | None:intergenic |
| CAATAATGCTACTATGAGTT+TGG | 0.241803 | 7_4:+17347044 | Msa1142690:CDS |
| TGTATTATTTCTCCACTCAT+AGG | 0.290006 | 7_4:-17347962 | None:intergenic |
| GATAGTATATATGTTGAAAA+AGG | 0.305633 | 7_4:+17348108 | Msa1142690:CDS |
| AAATGAGTTACACTGGAAAT+AGG | 0.344851 | 7_4:+17346776 | Msa1142690:CDS |
| CTGCTCTTGGATTTAGTAAT+CGG | 0.345058 | 7_4:-17347881 | None:intergenic |
| TGACACTTGTTCCTAAGTTT+AGG | 0.348740 | 7_4:-17346649 | None:intergenic |
| AGAAGAAACTTTGAGAAAAC+AGG | 0.368086 | 7_4:+17348269 | Msa1142690:CDS |
| GTCAAATCCTTAATAAGAAA+TGG | 0.375266 | 7_4:-17348052 | None:intergenic |
| CGAGTATAGTTATGATATAT+TGG | 0.382189 | 7_4:+17347113 | Msa1142690:CDS |
| CACGAATAGCCCGGACCACT+TGG | 0.382636 | 7_4:-17349812 | None:intergenic |
| ATTGTCTCCTTGAAGTCTAA+TGG | 0.388929 | 7_4:+17346973 | Msa1142690:CDS |
| CGAATGCAAAACATGGTTGC+AGG | 0.390717 | 7_4:+17346749 | Msa1142690:CDS |
| AAACGTGCCACGCTGGTAAC+TGG | 0.395273 | 7_4:+17348314 | Msa1142690:CDS |
| TTATTCTTTATAGGTTGTGC+TGG | 0.399025 | 7_4:-17349444 | None:intergenic |
| GGTGGATGATTGCCTGCTCT+TGG | 0.401055 | 7_4:-17347894 | None:intergenic |
| GCATTGGTCCTAACTCTTCT+GGG | 0.401380 | 7_4:+17347088 | Msa1142690:CDS |
| CCCCATGTTTATGGCTGAAA+TGG | 0.405710 | 7_4:-17346885 | None:intergenic |
| CTCTATCGTGTCAGAGAAGA+TGG | 0.412159 | 7_4:-17349701 | None:intergenic |
| TCATATAGTTGGTGGACGTT+TGG | 0.416184 | 7_4:-17341203 | None:intergenic |
| GGGCGATTGTCTTCATGATA+AGG | 0.417684 | 7_4:-17347941 | None:intergenic |
| AATAATGCTACTATGAGTTT+GGG | 0.418649 | 7_4:+17347045 | Msa1142690:CDS |
| CTTACAGGAGAATACCCTTT+GGG | 0.424065 | 7_4:+17349638 | Msa1142690:intron |
| GGCGATTGTCTTCATGATAA+GGG | 0.428503 | 7_4:-17347940 | None:intergenic |
| GTGGCACGTTTGCTTAAACT+TGG | 0.429416 | 7_4:-17348302 | None:intergenic |
| GCAGTCAATATTTGCTGCAT+TGG | 0.437797 | 7_4:+17347072 | Msa1142690:CDS |
| GCTTGTGTTGAGCAATTTGA+AGG | 0.443826 | 7_4:+17349495 | Msa1142690:CDS |
| CTTATGAAGCTGTGGAGCTC+AGG | 0.443850 | 7_4:+17349851 | Msa1142690:CDS |
| TTTATAGGTTGTGCTGGTTG+AGG | 0.447486 | 7_4:-17349438 | None:intergenic |
| GGCGCATTACGCAGCCCAAA+GGG | 0.447666 | 7_4:-17349652 | None:intergenic |
| AACAAAGTCACAACCTGAAA+GGG | 0.450677 | 7_4:-17346839 | None:intergenic |
| ATACTCCACTGAAAGGTTGC+CGG | 0.455652 | 7_4:-17349673 | None:intergenic |
| TGGCACGTTTGCTTAAACTT+GGG | 0.459371 | 7_4:-17348301 | None:intergenic |
| AGAGGTTCAGAAGAACGAAA+TGG | 0.462744 | 7_4:-17347231 | None:intergenic |
| CTGAGCTCCACAGCTTCATA+AGG | 0.464129 | 7_4:-17349850 | None:intergenic |
| GTTGTAATTCAGTGTGATAA+TGG | 0.467413 | 7_4:+17346601 | Msa1142690:intron |
| CTGAGAAGTTGTAGAATCCT+TGG | 0.468797 | 7_4:-17341253 | None:intergenic |
| GTATTATTTCTCCACTCATA+GGG | 0.469230 | 7_4:-17347961 | None:intergenic |
| TTGGAACGATGTGGAGTTCA+TGG | 0.481390 | 7_4:+17348347 | Msa1142690:CDS |
| CCACTCCCGCTCTATTCTTA+GGG | 0.481855 | 7_4:-17349942 | None:intergenic |
| TGAAAGACAGGAATACTTAG+AGG | 0.482175 | 7_4:-17344315 | None:intergenic |
| TGTCTGAACTCTTAACCCTC+AGG | 0.482923 | 7_4:-17347673 | None:intergenic |
| AGGTTGAAATCCAAGTGGTC+CGG | 0.483937 | 7_4:+17349802 | Msa1142690:intron |
| GGTTCCACCATTAGACTTCA+AGG | 0.484399 | 7_4:-17346980 | None:intergenic |
| TACTCGGACCCAGAAGAGTT+AGG | 0.488196 | 7_4:-17347096 | None:intergenic |
| CTAAGGATGTCTTCCGGCGG+TGG | 0.488522 | 7_4:-17349540 | None:intergenic |
| CGGCGCATTACGCAGCCCAA+AGG | 0.490001 | 7_4:-17349653 | None:intergenic |
| TTGAAATTCTCTTGTTCACC+AGG | 0.490655 | 7_4:-17349877 | None:intergenic |
| GGGAGTTCACCTCCAAGGTA+TGG | 0.491259 | 7_4:-17349922 | None:intergenic |
| CCCTAAGAATAGAGCGGGAG+TGG | 0.491585 | 7_4:+17349942 | Msa1142690:CDS |
| TTGGTCTTTCATATAGTTGG+TGG | 0.492622 | 7_4:-17341211 | None:intergenic |
| TGGTGTTGAATGATCCTTAA+GGG | 0.494819 | 7_4:+17349962 | Msa1142690:CDS |
| GCTTACAGGAGAATACCCTT+TGG | 0.494968 | 7_4:+17349637 | Msa1142690:intron |
| GCCAACGGCGGTAGATGATA+AGG | 0.497011 | 7_4:-17347915 | None:intergenic |
| GTTCCTAAGTTTAGGACAGC+AGG | 0.503985 | 7_4:-17346641 | None:intergenic |
| CTACCTGCTGTCCTAAACTT+AGG | 0.504618 | 7_4:+17346638 | Msa1142690:CDS |
| GCTGTGGAGCTCAGGAAGCC+TGG | 0.505155 | 7_4:+17349859 | Msa1142690:CDS |
| CTTTGGGCTGCGTAATGCGC+CGG | 0.507957 | 7_4:+17349654 | Msa1142690:CDS |
| CAATATATCATAACTATACT+CGG | 0.508438 | 7_4:-17347112 | None:intergenic |
| CAAATGCATACCTGAAAGAC+AGG | 0.508688 | 7_4:-17344327 | None:intergenic |
| GGTTGAAATCCAAGTGGTCC+GGG | 0.514405 | 7_4:+17349803 | Msa1142690:intron |
| AAAACACAACGTGCCACGAT+TGG | 0.528598 | 7_4:+17348400 | Msa1142690:CDS |
| GCCACGCTGGTAACTGGTAG+TGG | 0.528825 | 7_4:+17348320 | Msa1142690:CDS |
| ATGCAAATTTCTAGCTTGAG+AGG | 0.533709 | 7_4:-17347249 | None:intergenic |
| GTCTGAACTCTTAACCCTCA+GGG | 0.537566 | 7_4:-17347672 | None:intergenic |
| ACAACCTATAAAGAATAAAG+AGG | 0.540146 | 7_4:+17349449 | Msa1142690:CDS |
| CAACAAAGTCACAACCTGAA+AGG | 0.540955 | 7_4:-17346840 | None:intergenic |
| TGGTGAACAAGAGAATTTCA+AGG | 0.553834 | 7_4:+17349879 | Msa1142690:CDS |
| ACCTTATCATCTACCGCCGT+TGG | 0.558025 | 7_4:+17347914 | Msa1142690:CDS |
| GAACTCCCTAAGAATAGAGC+GGG | 0.561846 | 7_4:+17349937 | Msa1142690:CDS |
| AACCATTTCAGCCATAAACA+TGG | 0.562638 | 7_4:+17346883 | Msa1142690:CDS |
| TTGTTGCTAAGGATGTCTTC+CGG | 0.563104 | 7_4:-17349546 | None:intergenic |
| ACACGATAGAGAAAACTAAG+AGG | 0.570247 | 7_4:+17349713 | Msa1142690:CDS |
| TTGGATTTAGTAATCGGTGA+TGG | 0.570506 | 7_4:-17347875 | None:intergenic |
| GTGGTGTTGAATGATCCTTA+AGG | 0.571960 | 7_4:+17349961 | Msa1142690:CDS |
| AGAGGATGTTAAAGATGTTG+AGG | 0.572706 | 7_4:+17349467 | Msa1142690:CDS |
| CGATTACTAAATCCAAGAGC+AGG | 0.580228 | 7_4:+17347882 | Msa1142690:CDS |
| CTATTGGTCAAAAGGTGCAA+TGG | 0.580950 | 7_4:+17344239 | Msa1142690:intron |
| TCTTAGGGAGTTCACCTCCA+AGG | 0.587384 | 7_4:-17349927 | None:intergenic |
| ACCATTTCAGCCATAAACAT+GGG | 0.588005 | 7_4:+17346884 | Msa1142690:CDS |
| ATGTTTATGGCTGAAATGGT+TGG | 0.588725 | 7_4:-17346881 | None:intergenic |
| CAAAGGCTGAAACCATACCT+TGG | 0.596317 | 7_4:+17349910 | Msa1142690:CDS |
| GAAGACAATCGCCCTATGAG+TGG | 0.598862 | 7_4:+17347950 | Msa1142690:CDS |
| CCTGAAAGGGGACAGTAACA+TGG | 0.599066 | 7_4:-17346826 | None:intergenic |
| TGGAACCGTTGTTCTTCAAG+AGG | 0.600696 | 7_4:+17346996 | Msa1142690:CDS |
| ACTTTGAGAATTGAACAAGA+AGG | 0.601256 | 7_4:+17348073 | Msa1142690:CDS |
| ACTAATGCAATTGCCACCGC+CGG | 0.602115 | 7_4:+17349527 | Msa1142690:CDS |
| TTAGAGTTTGAAATCGTCAG+AGG | 0.607477 | 7_4:-17344264 | None:intergenic |
| AGACTTCAAGGAGACAATGA+AGG | 0.608582 | 7_4:-17346968 | None:intergenic |
| GCAAGTTCATCAACCAATCG+TGG | 0.613976 | 7_4:-17348413 | None:intergenic |
| ATGCGCCGGCAACCTTTCAG+TGG | 0.614074 | 7_4:+17349668 | Msa1142690:CDS |
| ATCTACGATCACGAATAGCC+CGG | 0.614439 | 7_4:-17349821 | None:intergenic |
| TCTACATAATCACCCCGACT+AGG | 0.616280 | 7_4:+17347639 | Msa1142690:CDS |
| GAGTTGCTAAAGTAAACTGT+TGG | 0.616702 | 7_4:-17347185 | None:intergenic |
| GTTCTTCAAGAGGAAAATGA+CGG | 0.617899 | 7_4:+17347006 | Msa1142690:CDS |
| TTTAAGCAAACGTGCCACGC+TGG | 0.619756 | 7_4:+17348307 | Msa1142690:CDS |
| CCATTTCAGCCATAAACATG+GGG | 0.621391 | 7_4:+17346885 | Msa1142690:CDS |
| GTCTCCTTGAAGTCTAATGG+TGG | 0.621511 | 7_4:+17346976 | Msa1142690:CDS |
| GGAGAGCATACTCCACTGAA+AGG | 0.623709 | 7_4:-17349680 | None:intergenic |
| ATTTCAAGGTTAACACACAA+AGG | 0.623819 | 7_4:+17349893 | Msa1142690:CDS |
| AGAAGTTGTAGAATCCTTGG+TGG | 0.623902 | 7_4:-17341250 | None:intergenic |
| AGGCTGAAACCATACCTTGG+AGG | 0.625439 | 7_4:+17349913 | Msa1142690:CDS |
| GAATGCAAAACATGGTTGCA+GGG | 0.629567 | 7_4:+17346750 | Msa1142690:CDS |
| AGTAATCGGTGATGGTGCGG+TGG | 0.630096 | 7_4:-17347867 | None:intergenic |
| ATCAACACATCAAGCCACCA+AGG | 0.636355 | 7_4:+17341236 | Msa1142690:five_prime_UTR |
| AGGGAGAAAATGAGTTACAC+TGG | 0.636460 | 7_4:+17346769 | Msa1142690:CDS |
| CCATGTCCGAATGCAAAACA+TGG | 0.639006 | 7_4:+17346742 | Msa1142690:CDS |
| ACAAAGTCACAACCTGAAAG+GGG | 0.645303 | 7_4:-17346838 | None:intergenic |
| TTCATGATAAGGGTTGCCAA+CGG | 0.655727 | 7_4:-17347930 | None:intergenic |
| ACGAGCAAGTGATGAGATAG+CGG | 0.658337 | 7_4:+17349398 | Msa1142690:intron |
| ATGATAAGGGTTGCCAACGG+CGG | 0.662399 | 7_4:-17347927 | None:intergenic |
| CTGAACTCTTAACCCTCAGG+GGG | 0.662405 | 7_4:-17347670 | None:intergenic |
| AACGGCGGTAGATGATAAGG+TGG | 0.663201 | 7_4:-17347912 | None:intergenic |
| GGGGATCATCTTCCTAGTCG+GGG | 0.667464 | 7_4:-17347651 | None:intergenic |
| AGACACAGTAGCCAATGTGA+AGG | 0.670298 | 7_4:+17347691 | Msa1142690:CDS |
| TTTAGTAATCGGTGATGGTG+CGG | 0.670627 | 7_4:-17347870 | None:intergenic |
| TTGCTAAGGATGTCTTCCGG+CGG | 0.675374 | 7_4:-17349543 | None:intergenic |
| TCTGAACTCTTAACCCTCAG+GGG | 0.679402 | 7_4:-17347671 | None:intergenic |
| AGTGGCACGTTGGAACGATG+TGG | 0.681636 | 7_4:+17348338 | Msa1142690:CDS |
| GGTAACTGGTAGTGGCACGT+TGG | 0.688244 | 7_4:+17348328 | Msa1142690:CDS |
| TGATGATGGCATATTGATGA+CGG | 0.691545 | 7_4:+17348135 | Msa1142690:CDS |
| TGAACTCCCTAAGAATAGAG+CGG | 0.694031 | 7_4:+17349936 | Msa1142690:CDS |
| AAGAACGAAATGGAATCACA+AGG | 0.699518 | 7_4:-17347221 | None:intergenic |
| ATTGCAGGTTGAAATCCAAG+TGG | 0.702016 | 7_4:+17349797 | Msa1142690:intron |
| GCCACTACCAGTTACCAGCG+TGG | 0.709294 | 7_4:-17348321 | None:intergenic |
| GGAGATAGGCGGTACCATGG+GGG | 0.718009 | 7_4:-17347274 | None:intergenic |
| CATTTCAGCCATAAACATGG+GGG | 0.731821 | 7_4:+17346886 | Msa1142690:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GAGTATTATAATTTTTTTTA+AGG | + | chr7_4:17343615-17343634 | Msa1142690:intron | 10.0% |
| !! | TATATAATTAATTAGTTCAT+AGG | + | chr7_4:17345010-17345029 | Msa1142690:intron | 10.0% |
| !!! | TTTTCATTTTTTTTTTTTGA+AGG | - | chr7_4:17345549-17345568 | None:intergenic | 10.0% |
| !!! | TCAAAATTTTTTTTTTCTTA+TGG | + | chr7_4:17346940-17346959 | Msa1142690:CDS | 10.0% |
| !!! | ATATTCTTTTATTGATTTAA+TGG | + | chr7_4:17347595-17347614 | Msa1142690:intron | 10.0% |
| !!! | TTAATTTTTTAGTCATATTT+AGG | + | chr7_4:17348168-17348187 | Msa1142690:intron | 10.0% |
| !! | ATATTTATAGAAAGAAATTA+AGG | - | chr7_4:17348514-17348533 | None:intergenic | 10.0% |
| !! | TTGATTATATAAAGTTGTAA+TGG | - | chr7_4:17344206-17344225 | None:intergenic | 15.0% |
| !!! | GTTTAACTTGTTATTTTTTT+AGG | - | chr7_4:17341901-17341920 | None:intergenic | 15.0% |
| !! | AAACATGATAGAAAAAAAAA+TGG | - | chr7_4:17342101-17342120 | None:intergenic | 15.0% |
| !!! | TTTTATTAAGAAGAAATAAG+AGG | + | chr7_4:17342201-17342220 | Msa1142690:intron | 15.0% |
| !! | TAAATATGAGTATATAATTG+GGG | - | chr7_4:17343119-17343138 | None:intergenic | 15.0% |
| !! | CTAAATATGAGTATATAATT+GGG | - | chr7_4:17343120-17343139 | None:intergenic | 15.0% |
| !!! | AGAAACTATTTTATTTTGTT+AGG | - | chr7_4:17343582-17343601 | None:intergenic | 15.0% |
| !! | AATAAAATAGTTTCTTTCAA+TGG | + | chr7_4:17343587-17343606 | Msa1142690:intron | 15.0% |
| !! | ATAAAATAGTTTCTTTCAAT+GGG | + | chr7_4:17343588-17343607 | Msa1142690:intron | 15.0% |
| !! | TTGATTATATAAAGTTGTAA+TGG | + | chr7_4:17344206-17344225 | Msa1142690:intron | 15.0% |
| !! | TAAATATGAGTATATAATTG+GGG | - | chr7_4:17343119-17343138 | None:intergenic | 15.0% |
| !! | CTAAATATGAGTATATAATT+GGG | - | chr7_4:17343120-17343139 | None:intergenic | 15.0% |
| !! | AAATTTACATTCAAAATGTT+AGG | + | chr7_4:17344833-17344852 | Msa1142690:intron | 15.0% |
| !! | CATACTTTAAATATATCTTA+AGG | - | chr7_4:17345133-17345152 | None:intergenic | 15.0% |
| !! | TATTATCTCTTCATAAATAT+AGG | + | chr7_4:17345190-17345209 | Msa1142690:intron | 15.0% |
| !! | GTTTGTAAAAAATTATTACT+AGG | - | chr7_4:17345276-17345295 | None:intergenic | 15.0% |
| !! | AAAATATGTAACATAATTAG+AGG | - | chr7_4:17345302-17345321 | None:intergenic | 15.0% |
| !!! | TACTTTTTATTATGAATTAC+AGG | - | chr7_4:17345326-17345345 | None:intergenic | 15.0% |
| !! | AATTAATTATATCTCTTGAA+AGG | + | chr7_4:17345346-17345365 | Msa1142690:intron | 15.0% |
| !!! | ATTTTTTTTTTTTGAAGGAA+GGG | - | chr7_4:17345544-17345563 | None:intergenic | 15.0% |
| !!! | AGAAACTATTTTATTTTGTT+AGG | - | chr7_4:17343582-17343601 | None:intergenic | 15.0% |
| !! | AATAAAATAGTTTCTTTCAA+TGG | + | chr7_4:17343587-17343606 | Msa1142690:intron | 15.0% |
| !! | ATAAAATAGTTTCTTTCAAT+GGG | + | chr7_4:17343588-17343607 | Msa1142690:intron | 15.0% |
| !!! | GAGTATTATAATTTTTTTGA+AGG | + | chr7_4:17346041-17346060 | Msa1142690:intron | 15.0% |
| !! | GAAAATAATAAGACTTTAAT+TGG | - | chr7_4:17347322-17347341 | None:intergenic | 15.0% |
| !! | AAATTTATTATAGTACAACA+GGG | - | chr7_4:17347514-17347533 | None:intergenic | 15.0% |
| !! | AAAATTTATTATAGTACAAC+AGG | - | chr7_4:17347515-17347534 | None:intergenic | 15.0% |
| !!! | AGTAATTTGTATTCTTATTA+AGG | + | chr7_4:17348018-17348037 | Msa1142690:CDS | 15.0% |
| !! | ATATTATAATAGTTTCATCA+TGG | - | chr7_4:17348723-17348742 | None:intergenic | 15.0% |
| !! | TTAAACAAAATTACTATTTC+AGG | - | chr7_4:17348917-17348936 | None:intergenic | 15.0% |
| !! | ATAGATTCTGATAATATCTT+AGG | - | chr7_4:17344624-17344643 | None:intergenic | 20.0% |
| !! | ATATATATGCAATATGTTTC+TGG | - | chr7_4:17341674-17341693 | None:intergenic | 20.0% |
| !! | TTTAATCACTATTAGTCAAA+AGG | - | chr7_4:17341839-17341858 | None:intergenic | 20.0% |
| !!! | TTTTGTATTGTTTTTGTGTT+GGG | - | chr7_4:17342256-17342275 | None:intergenic | 20.0% |
| !!! | ATTTTATTCTCTTATCTGAT+AGG | - | chr7_4:17342555-17342574 | None:intergenic | 20.0% |
| !! | CTAAAAAGTTTAGATCTTTA+GGG | - | chr7_4:17342838-17342857 | None:intergenic | 20.0% |
| !! | ACTAAAAAGTTTAGATCTTT+AGG | - | chr7_4:17342839-17342858 | None:intergenic | 20.0% |
| !!! | ATCTAAACTTTTTAGTATGA+CGG | + | chr7_4:17342843-17342862 | Msa1142690:intron | 20.0% |
| !!! | ATTTTATTCTCTTATCTCAT+AGG | - | chr7_4:17342938-17342957 | None:intergenic | 20.0% |
| !! | AAATATGAGTATATAATTGG+GGG | - | chr7_4:17343118-17343137 | None:intergenic | 20.0% |
| !! | CCTAAATATGAGTATATAAT+TGG | - | chr7_4:17343121-17343140 | None:intergenic | 20.0% |
| !! | CCAATTATATACTCATATTT+AGG | + | chr7_4:17343118-17343137 | Msa1142690:intron | 20.0% |
| !! | ATTAATTAGAAAATGCATGA+TGG | + | chr7_4:17343196-17343215 | Msa1142690:intron | 20.0% |
| !!! | ACTTGATTTTCTCAATTTAA+AGG | + | chr7_4:17343265-17343284 | Msa1142690:intron | 20.0% |
| !! | AATAAAATTAAGTGAAAGAG+AGG | + | chr7_4:17343547-17343566 | Msa1142690:intron | 20.0% |
| !! | TAAAATAGTTTCTTTCAATG+GGG | + | chr7_4:17343589-17343608 | Msa1142690:intron | 20.0% |
| !! | TATAAAAGCTCAAAAATAGA+AGG | - | chr7_4:17343894-17343913 | None:intergenic | 20.0% |
| !!! | TAATGGTTTTTAATCACTAT+TGG | + | chr7_4:17344223-17344242 | Msa1142690:intron | 20.0% |
| !! | ATTTATATGCAATATGTTTC+TGG | + | chr7_4:17344396-17344415 | Msa1142690:intron | 20.0% |
| !! | ATAGATTCTGATAATATCTT+AGG | + | chr7_4:17344624-17344643 | Msa1142690:intron | 20.0% |
| !! | AAATATGAGTATATAATTGG+GGG | - | chr7_4:17343118-17343137 | None:intergenic | 20.0% |
| !! | CCTAAATATGAGTATATAAT+TGG | - | chr7_4:17343121-17343140 | None:intergenic | 20.0% |
| !! | CCAATTATATACTCATATTT+AGG | + | chr7_4:17343118-17343137 | Msa1142690:intron | 20.0% |
| !! | TAAAGTAAGTATTATCAACA+GGG | + | chr7_4:17344761-17344780 | Msa1142690:intron | 20.0% |
| !! | AATGTAAATTTAAGAAGTGA+GGG | - | chr7_4:17344824-17344843 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTTTGAAGGAAG+GGG | - | chr7_4:17345543-17345562 | None:intergenic | 20.0% |
| !!! | CATTTTTTTTTTTTGAAGGA+AGG | - | chr7_4:17345545-17345564 | None:intergenic | 20.0% |
| !!! | AATTAATAGTTGATAATCAG+TGG | - | chr7_4:17345608-17345627 | None:intergenic | 20.0% |
| !! | ATTAATTAGAAAATGCATGA+TGG | + | chr7_4:17343196-17343215 | Msa1142690:intron | 20.0% |
| !!! | ACTTGATTTTCTCAATTTAA+AGG | + | chr7_4:17343265-17343284 | Msa1142690:intron | 20.0% |
| !! | AATAAAATTAAGTGAAAGAG+AGG | + | chr7_4:17343547-17343566 | Msa1142690:intron | 20.0% |
| !! | TAAAATAGTTTCTTTCAATG+GGG | + | chr7_4:17343589-17343608 | Msa1142690:intron | 20.0% |
| !! | TATAAAAGCTCAAAAATAGA+AGG | - | chr7_4:17343894-17343913 | None:intergenic | 20.0% |
| !!! | TCTCAAATCAAATTTTCTTA+TGG | + | chr7_4:17346910-17346929 | Msa1142690:CDS | 20.0% |
| !! | CAATATATCATAACTATACT+CGG | - | chr7_4:17347115-17347134 | None:intergenic | 20.0% |
| !!! | CTAACAAAACAACTTTATTT+TGG | - | chr7_4:17347404-17347423 | None:intergenic | 20.0% |
| !!! | TTTTATTGATTTAATGGCAA+TGG | + | chr7_4:17347601-17347620 | Msa1142690:intron | 20.0% |
| !! | GATAGTATATATGTTGAAAA+AGG | + | chr7_4:17348108-17348127 | Msa1142690:CDS | 20.0% |
| !! | AATCAAGTTAAGAGATTAAT+AGG | + | chr7_4:17349019-17349038 | Msa1142690:intron | 20.0% |
| !! | ATCAAGTTAAGAGATTAATA+GGG | + | chr7_4:17349020-17349039 | Msa1142690:intron | 20.0% |
| !! | TTTACGATAAATTAACTAAG+TGG | - | chr7_4:17349089-17349108 | None:intergenic | 20.0% |
| !!! | TTTTTGGTCTTTCATATAGT+TGG | - | chr7_4:17342004-17342023 | None:intergenic | 25.0% |
| !!! | TTTTTGGTCTTTCATATAGT+TGG | + | chr7_4:17342004-17342023 | Msa1142690:intron | 25.0% |
| !!! | TAATCCCTTCCTTTTTTTAA+AGG | + | chr7_4:17342046-17342065 | Msa1142690:intron | 25.0% |
| !! | ATTGCCTTTAAAAAAAGGAA+GGG | - | chr7_4:17342053-17342072 | None:intergenic | 25.0% |
| ! | GTTTGTAATCTTAGTTATGA+AGG | + | chr7_4:17342117-17342136 | Msa1142690:intron | 25.0% |
| ! | TTAGTTATGAAGGAATCTAT+GGG | + | chr7_4:17342127-17342146 | Msa1142690:intron | 25.0% |
| !!! | TTTGTATTGTTTTTGTGTTG+GGG | - | chr7_4:17342255-17342274 | None:intergenic | 25.0% |
| !!! | GTTTTGTATTGTTTTTGTGT+TGG | - | chr7_4:17342257-17342276 | None:intergenic | 25.0% |
| !! | CAGGTTCAAATTTGTTTATT+GGG | - | chr7_4:17342289-17342308 | None:intergenic | 25.0% |
| !! | TCAGGTTCAAATTTGTTTAT+TGG | - | chr7_4:17342290-17342309 | None:intergenic | 25.0% |
| !!! | ACTTTGTTTTGGTTTAGTAA+GGG | - | chr7_4:17342382-17342401 | None:intergenic | 25.0% |
| !!! | AACTTTGTTTTGGTTTAGTA+AGG | - | chr7_4:17342383-17342402 | None:intergenic | 25.0% |
| ! | AGAATAAAATCAGACATCTT+AGG | + | chr7_4:17342565-17342584 | Msa1142690:intron | 25.0% |
| ! | AGAATAAAATCAGACATCTT+AGG | + | chr7_4:17342565-17342584 | Msa1142690:intron | 25.0% |
| ! | TAACATAGAATTCACTTTAG+TGG | + | chr7_4:17343162-17343181 | Msa1142690:intron | 25.0% |
| ! | AACATAGAATTCACTTTAGT+GGG | + | chr7_4:17343163-17343182 | Msa1142690:intron | 25.0% |
| !!! | CTAATTGTTTTGTCTCTATA+GGG | - | chr7_4:17343355-17343374 | None:intergenic | 25.0% |
| ! | CTATAGAGACAAAACAATTA+GGG | + | chr7_4:17343354-17343373 | Msa1142690:intron | 25.0% |
| !!! | CTCGGTTCTATTTTTAAAAT+AGG | + | chr7_4:17343432-17343451 | Msa1142690:intron | 25.0% |
| !!! | AATTGCGTTTTGATTTTACT+GGG | - | chr7_4:17343459-17343478 | None:intergenic | 25.0% |
| ! | AAAATAGTTTCTTTCAATGG+GGG | + | chr7_4:17343590-17343609 | Msa1142690:intron | 25.0% |
| !! | AAGACTTGTTTGATTTACAT+TGG | + | chr7_4:17343806-17343825 | Msa1142690:intron | 25.0% |
| !! | AGACTTGTTTGATTTACATT+GGG | + | chr7_4:17343807-17343826 | Msa1142690:intron | 25.0% |
| ! | AAAGTTTAGAGAAACAATAC+AGG | - | chr7_4:17343932-17343951 | None:intergenic | 25.0% |
| !! | TGTATTGTTTCTCTAAACTT+TGG | + | chr7_4:17343931-17343950 | Msa1142690:intron | 25.0% |
| !! | CTATACTGCTATAGTATTTT+GGG | + | chr7_4:17343977-17343996 | Msa1142690:intron | 25.0% |
| ! | AAAATCAATGTACTCAAAGA+CGG | - | chr7_4:17344016-17344035 | None:intergenic | 25.0% |
| ! | TTTAATCACTATTGGTCAAA+AGG | + | chr7_4:17344231-17344250 | Msa1142690:intron | 25.0% |
| ! | GTAAAGTAAGTATTATCAAC+AGG | + | chr7_4:17344760-17344779 | Msa1142690:intron | 25.0% |
| ! | AAAGTAAGTATTATCAACAG+GGG | + | chr7_4:17344762-17344781 | Msa1142690:intron | 25.0% |
| ! | ATGTAAATTTAAGAAGTGAG+GGG | - | chr7_4:17344823-17344842 | None:intergenic | 25.0% |
| ! | GAATGTAAATTTAAGAAGTG+AGG | - | chr7_4:17344825-17344844 | None:intergenic | 25.0% |
| ! | ATAAAGAAAAATCTCAAGAG+CGG | - | chr7_4:17345217-17345236 | None:intergenic | 25.0% |
| !!! | AATTGTTTTGTGTCTCTATA+GGG | - | chr7_4:17345780-17345799 | None:intergenic | 25.0% |
| !!! | TAATTGTTTTGTGTCTCTAT+AGG | - | chr7_4:17345781-17345800 | None:intergenic | 25.0% |
| ! | TATAGAGACACAAAACAATT+AGG | + | chr7_4:17345780-17345799 | Msa1142690:intron | 25.0% |
| ! | ATAGAGACACAAAACAATTA+GGG | + | chr7_4:17345781-17345800 | Msa1142690:intron | 25.0% |
| !!! | CTCGGTTCTATTTTTAAAAT+AGG | + | chr7_4:17343432-17343451 | Msa1142690:intron | 25.0% |
| !!! | AATTGCGTTTTGATTTTACT+GGG | - | chr7_4:17343459-17343478 | None:intergenic | 25.0% |
| !! | AAGACTTGTTTGATTTACAT+TGG | + | chr7_4:17343806-17343825 | Msa1142690:intron | 25.0% |
| !! | AGACTTGTTTGATTTACATT+GGG | + | chr7_4:17343807-17343826 | Msa1142690:intron | 25.0% |
| ! | AAAGTTTAGAGAAACAATAC+AGG | - | chr7_4:17343932-17343951 | None:intergenic | 25.0% |
| !! | TGTATTGTTTCTCTAAACTT+TGG | + | chr7_4:17343931-17343950 | Msa1142690:intron | 25.0% |
| !! | CTATACTGCTATAGTATTTT+GGG | + | chr7_4:17343977-17343996 | Msa1142690:intron | 25.0% |
| ! | AAAATCAATGTACTCAAAGA+CGG | - | chr7_4:17344016-17344035 | None:intergenic | 25.0% |
| !! | CTTTATTTGATTCTAGCAAA+TGG | + | chr7_4:17346547-17346566 | Msa1142690:intron | 25.0% |
| !!! | TGGTTCAAAGTTTAATTTGA+TGG | + | chr7_4:17346567-17346586 | Msa1142690:intron | 25.0% |
| ! | AATAATGCTACTATGAGTTT+GGG | + | chr7_4:17347045-17347064 | Msa1142690:CDS | 25.0% |
| ! | CGAGTATAGTTATGATATAT+TGG | + | chr7_4:17347113-17347132 | Msa1142690:CDS | 25.0% |
| ! | ACGAAAAAAAAGCAAAGAAA+AGG | - | chr7_4:17347298-17347317 | None:intergenic | 25.0% |
| !! | GACTTTTCCATTTCTTATTA+AGG | + | chr7_4:17348045-17348064 | Msa1142690:CDS | 25.0% |
| ! | GTCAAATCCTTAATAAGAAA+TGG | - | chr7_4:17348055-17348074 | None:intergenic | 25.0% |
| ! | ACATACATAAATCTAACCAA+CGG | - | chr7_4:17348638-17348657 | None:intergenic | 25.0% |
| ! | TATTTCAGGATTAAAAGCTA+GGG | - | chr7_4:17348903-17348922 | None:intergenic | 25.0% |
| !!! | ATTTTGTTTAACTCAACACT+AGG | + | chr7_4:17348926-17348945 | Msa1142690:intron | 25.0% |
| !! | TTAACTTGATTGAATAATCG+TGG | - | chr7_4:17349010-17349029 | None:intergenic | 25.0% |
| ! | GATTAATAGGGTTATAACTT+AGG | + | chr7_4:17349032-17349051 | Msa1142690:intron | 25.0% |
| !! | CTTTTCATATAAAGCAATAG+CGG | + | chr7_4:17349143-17349162 | Msa1142690:intron | 25.0% |
| ! | GAAAATTATGTTGAGATGAA+TGG | - | chr7_4:17349183-17349202 | None:intergenic | 25.0% |
| ! | GTAATAAATATTGATCCACA+AGG | - | chr7_4:17349329-17349348 | None:intergenic | 25.0% |
| !! | ATTACTACTTCGATAGTTTT+TGG | + | chr7_4:17349344-17349363 | Msa1142690:intron | 25.0% |
| ! | ACAACCTATAAAGAATAAAG+AGG | + | chr7_4:17349449-17349468 | Msa1142690:CDS | 25.0% |
| ! | ACATCCTCTTTATTCTTTAT+AGG | - | chr7_4:17349456-17349475 | None:intergenic | 25.0% |
| !!! | AACTAAGAGGTATTATGATA+AGG | + | chr7_4:17349726-17349745 | Msa1142690:intron | 25.0% |
| !!! | ACTAAGAGGTATTATGATAA+GGG | + | chr7_4:17349727-17349746 | Msa1142690:intron | 25.0% |
| ATCTATCCAAAAAAATCCGT+TGG | + | chr7_4:17341460-17341479 | Msa1142690:intron | 30.0% | |
| ! | CATTGCCTTTAAAAAAAGGA+AGG | - | chr7_4:17342054-17342073 | None:intergenic | 30.0% |
| ! | GTGTCATTGCCTTTAAAAAA+AGG | - | chr7_4:17342058-17342077 | None:intergenic | 30.0% |
| TGACACGTAAAAAGAAAATG+TGG | + | chr7_4:17342072-17342091 | Msa1142690:intron | 30.0% | |
| GACACGTAAAAAGAAAATGT+GGG | + | chr7_4:17342073-17342092 | Msa1142690:intron | 30.0% | |
| CTTAGTTATGAAGGAATCTA+TGG | + | chr7_4:17342126-17342145 | Msa1142690:intron | 30.0% | |
| !!! | TTGTATTGTTTTTGTGTTGG+GGG | - | chr7_4:17342254-17342273 | None:intergenic | 30.0% |
| ! | TCAAATTTGTTTATTGGGCT+TGG | - | chr7_4:17342284-17342303 | None:intergenic | 30.0% |
| TAAAGTTTGTATCGAGTTTC+AGG | - | chr7_4:17342330-17342349 | None:intergenic | 30.0% | |
| !! | CCTAGTATTGAACTTTGTTT+TGG | - | chr7_4:17342393-17342412 | None:intergenic | 30.0% |
| CCAAAACAAAGTTCAATACT+AGG | + | chr7_4:17342390-17342409 | Msa1142690:intron | 30.0% | |
| !! | CTTTACAAAACTGACTTGTA+AGG | + | chr7_4:17343083-17343102 | Msa1142690:intron | 30.0% |
| !! | AAATGCATGATGGATATTGA+AGG | + | chr7_4:17343206-17343225 | Msa1142690:intron | 30.0% |
| TAGTAGGAAACAGAAAAGAA+TGG | + | chr7_4:17343316-17343335 | Msa1142690:intron | 30.0% | |
| !! | CCTAATTGTTTTGTCTCTAT+AGG | - | chr7_4:17343356-17343375 | None:intergenic | 30.0% |
| CCTATAGAGACAAAACAATT+AGG | + | chr7_4:17343353-17343372 | Msa1142690:intron | 30.0% | |
| ATAGATGCATAACAAATGAC+AGG | + | chr7_4:17343387-17343406 | Msa1142690:intron | 30.0% | |
| TAGATGCATAACAAATGACA+GGG | + | chr7_4:17343388-17343407 | Msa1142690:intron | 30.0% | |
| !!! | ATTGCGTTTTGATTTTACTG+GGG | - | chr7_4:17343458-17343477 | None:intergenic | 30.0% |
| !!! | GAATTGCGTTTTGATTTTAC+TGG | - | chr7_4:17343460-17343479 | None:intergenic | 30.0% |
| AAATAGTTTCTTTCAATGGG+GGG | + | chr7_4:17343591-17343610 | Msa1142690:intron | 30.0% | |
| !!! | ATGTGTTTTTTAAGCCTTAG+AGG | + | chr7_4:17343781-17343800 | Msa1142690:intron | 30.0% |
| TTCTCTAAACTTTGGTATTG+TGG | + | chr7_4:17343939-17343958 | Msa1142690:intron | 30.0% | |
| AAATACTATAGCAGTATAGC+AGG | - | chr7_4:17343976-17343995 | None:intergenic | 30.0% | |
| ! | GCTATACTGCTATAGTATTT+TGG | + | chr7_4:17343976-17343995 | Msa1142690:intron | 30.0% |
| TCTATCCAAAAAAATCCGTT+GGG | - | chr7_4:17341461-17341480 | None:intergenic | 30.0% | |
| ATCTATCCAAAAAAATCCGT+TGG | - | chr7_4:17341460-17341479 | None:intergenic | 30.0% | |
| TCCTAACTCAACTTTACAAA+AGG | + | chr7_4:17344658-17344677 | Msa1142690:intron | 30.0% | |
| ! | ACCTTTTGTAAAGTTGAGTT+AGG | - | chr7_4:17344662-17344681 | None:intergenic | 30.0% |
| TAACGTAGAATTCACTTTAG+AGG | + | chr7_4:17344737-17344756 | Msa1142690:intron | 30.0% | |
| AACGTAGAATTCACTTTAGA+GGG | + | chr7_4:17344738-17344757 | Msa1142690:intron | 30.0% | |
| TGTAAATTTAAGAAGTGAGG+GGG | - | chr7_4:17344822-17344841 | None:intergenic | 30.0% | |
| ATTGCTCACAAATTTACTTG+TGG | + | chr7_4:17345052-17345071 | Msa1142690:intron | 30.0% | |
| TTGCTCACAAATTTACTTGT+GGG | + | chr7_4:17345053-17345072 | Msa1142690:intron | 30.0% | |
| TATAATTCAGATGGTGACTT+TGG | - | chr7_4:17345106-17345125 | None:intergenic | 30.0% | |
| AGTCACCATCTGAATTATAT+TGG | + | chr7_4:17345107-17345126 | Msa1142690:intron | 30.0% | |
| TAAGGCCAATATAATTCAGA+TGG | - | chr7_4:17345115-17345134 | None:intergenic | 30.0% | |
| TAAAGAAAAATCTCAAGAGC+GGG | - | chr7_4:17345216-17345235 | None:intergenic | 30.0% | |
| !! | AAATGCATGATGGATATTGA+AGG | + | chr7_4:17343206-17343225 | Msa1142690:intron | 30.0% |
| TAGTAGGAAACAGAAAAGAA+TGG | + | chr7_4:17343316-17343335 | Msa1142690:intron | 30.0% | |
| !! | ATTGTTTTGTGTCTCTATAG+GGG | - | chr7_4:17345779-17345798 | None:intergenic | 30.0% |
| ATAGATGCATAACAAATGAC+AGG | + | chr7_4:17343387-17343406 | Msa1142690:intron | 30.0% | |
| TAGATGCATAACAAATGACA+GGG | + | chr7_4:17343388-17343407 | Msa1142690:intron | 30.0% | |
| !!! | ATTGCGTTTTGATTTTACTG+GGG | - | chr7_4:17343458-17343477 | None:intergenic | 30.0% |
| !!! | GAATTGCGTTTTGATTTTAC+TGG | - | chr7_4:17343460-17343479 | None:intergenic | 30.0% |
| !!! | ATGTGTTTTTTAAGCCTTAG+AGG | + | chr7_4:17343781-17343800 | Msa1142690:intron | 30.0% |
| TTCTCTAAACTTTGGTATTG+TGG | + | chr7_4:17343939-17343958 | Msa1142690:intron | 30.0% | |
| AAATACTATAGCAGTATAGC+AGG | - | chr7_4:17343976-17343995 | None:intergenic | 30.0% | |
| ! | GCTATACTGCTATAGTATTT+TGG | + | chr7_4:17343976-17343995 | Msa1142690:intron | 30.0% |
| GTTGTAATTCAGTGTGATAA+TGG | + | chr7_4:17346601-17346620 | Msa1142690:intron | 30.0% | |
| AAATGAGTTACACTGGAAAT+AGG | + | chr7_4:17346776-17346795 | Msa1142690:CDS | 30.0% | |
| ! | ATTTTCCTCTTGAAGAACAA+CGG | - | chr7_4:17347004-17347023 | None:intergenic | 30.0% |
| CAATAATGCTACTATGAGTT+TGG | + | chr7_4:17347044-17347063 | Msa1142690:CDS | 30.0% | |
| AAAAGCAAAGAAAAGGAGAT+AGG | - | chr7_4:17347291-17347310 | None:intergenic | 30.0% | |
| ! | GCATTTTGTCTCAAATTCAT+CGG | + | chr7_4:17347367-17347386 | Msa1142690:intron | 30.0% |
| ! | GATCAATGTGTTGTTAATTG+CGG | + | chr7_4:17347561-17347580 | Msa1142690:intron | 30.0% |
| AAAAATCATCTCCTTCACAT+TGG | - | chr7_4:17347705-17347724 | None:intergenic | 30.0% | |
| ! | GTATTATTTCTCCACTCATA+GGG | - | chr7_4:17347964-17347983 | None:intergenic | 30.0% |
| ! | TGTATTATTTCTCCACTCAT+AGG | - | chr7_4:17347965-17347984 | None:intergenic | 30.0% |
| ! | ACTTTGAGAATTGAACAAGA+AGG | + | chr7_4:17348073-17348092 | Msa1142690:CDS | 30.0% |
| TTGAAAAAGGATAGTGATGA+TGG | + | chr7_4:17348121-17348140 | Msa1142690:CDS | 30.0% | |
| ! | AGAAGAAACTTTGAGAAAAC+AGG | + | chr7_4:17348269-17348288 | Msa1142690:CDS | 30.0% |
| CAATCACATGAATTGATCTT+AGG | + | chr7_4:17348860-17348879 | Msa1142690:intron | 30.0% | |
| CTATTTCAGGATTAAAAGCT+AGG | - | chr7_4:17348904-17348923 | None:intergenic | 30.0% | |
| ACTCTCAATTTCATATCTCT+AGG | - | chr7_4:17348954-17348973 | None:intergenic | 30.0% | |
| ATAGGGTTATAACTTAGGAA+AGG | + | chr7_4:17349037-17349056 | Msa1142690:intron | 30.0% | |
| TAGGGTTATAACTTAGGAAA+GGG | + | chr7_4:17349038-17349057 | Msa1142690:intron | 30.0% | |
| GGATGTGTAAAGTTTGTATT+TGG | - | chr7_4:17349266-17349285 | None:intergenic | 30.0% | |
| TTATTCTTTATAGGTTGTGC+TGG | - | chr7_4:17349447-17349466 | None:intergenic | 30.0% | |
| !! | CTAAGAGGTATTATGATAAG+GGG | + | chr7_4:17349728-17349747 | Msa1142690:intron | 30.0% |
| ! | TATTTTTCCTTATGAAGCTG+TGG | + | chr7_4:17349843-17349862 | Msa1142690:CDS | 30.0% |
| ATTTCAAGGTTAACACACAA+AGG | + | chr7_4:17349893-17349912 | Msa1142690:CDS | 30.0% | |
| ! | TTGGTCTTTCATATAGTTGG+TGG | - | chr7_4:17342007-17342026 | None:intergenic | 35.0% |
| !!! | TGGCTTGATGTGTTGATTTT+TGG | - | chr7_4:17341988-17342007 | None:intergenic | 35.0% |
| TCTAAGTATTCCTGTCTTTC+AGG | - | chr7_4:17344317-17344336 | None:intergenic | 35.0% | |
| TGAAAGACAGGAATACTTAG+AGG | + | chr7_4:17341752-17341771 | Msa1142690:intron | 35.0% | |
| ! | TTAGAGTTTGAAATCGTCAG+AGG | + | chr7_4:17341803-17341822 | Msa1142690:intron | 35.0% |
| ! | CTATTAGTCAAAAGGTGCAA+TGG | - | chr7_4:17341831-17341850 | None:intergenic | 35.0% |
| !!! | TGGCTTGATGTGTTGATTTT+TGG | + | chr7_4:17341988-17342007 | Msa1142690:intron | 35.0% |
| ! | TTGGTCTTTCATATAGTTGG+TGG | + | chr7_4:17342007-17342026 | Msa1142690:intron | 35.0% |
| !!! | GAGTTTTTGGTTTCTGTATC+AGG | - | chr7_4:17342308-17342327 | None:intergenic | 35.0% |
| ! | TATCGAGTTTCAGGAGTTTT+TGG | - | chr7_4:17342321-17342340 | None:intergenic | 35.0% |
| !! | TTGATTTGTATCAGGTTCAG+GGG | - | chr7_4:17342355-17342374 | None:intergenic | 35.0% |
| !! | GTTGATTTGTATCAGGTTCA+GGG | - | chr7_4:17342356-17342375 | None:intergenic | 35.0% |
| !! | AGTTGATTTGTATCAGGTTC+AGG | - | chr7_4:17342357-17342376 | None:intergenic | 35.0% |
| !! | AGGGATAGTTGATTTGTATC+AGG | - | chr7_4:17342363-17342382 | None:intergenic | 35.0% |
| !!! | GCTGTGTTTTAAAACTCTAG+TGG | - | chr7_4:17342425-17342444 | None:intergenic | 35.0% |
| ATTCTCTTATCTGATAGGAC+TGG | - | chr7_4:17342550-17342569 | None:intergenic | 35.0% | |
| TCCTTGCCACAAACAATTAT+CGG | + | chr7_4:17342594-17342613 | Msa1142690:intron | 35.0% | |
| ! | CAAACCTTGTTTCACAACTT+CGG | + | chr7_4:17342678-17342697 | Msa1142690:intron | 35.0% |
| ATTCTCTTATCTCATAGGAC+TGG | - | chr7_4:17342933-17342952 | None:intergenic | 35.0% | |
| !! | TTAAGGCCCATAGTTTTTAG+AGG | + | chr7_4:17343632-17343651 | Msa1142690:intron | 35.0% |
| ! | ACCGAACCTCTAAAAACTAT+GGG | - | chr7_4:17343641-17343660 | None:intergenic | 35.0% |
| ! | AACCGAACCTCTAAAAACTA+TGG | - | chr7_4:17343642-17343661 | None:intergenic | 35.0% |
| !! | TAGTTTTTAGAGGTTCGGTT+CGG | + | chr7_4:17343642-17343661 | Msa1142690:intron | 35.0% |
| CTACTAGACATCATTTGTCA+GGG | - | chr7_4:17343697-17343716 | None:intergenic | 35.0% | |
| ACTACTAGACATCATTTGTC+AGG | - | chr7_4:17343698-17343717 | None:intergenic | 35.0% | |
| ! | TTAGAGTTTGAAATCGTCAG+AGG | - | chr7_4:17341803-17341822 | None:intergenic | 35.0% |
| TGAAAGACAGGAATACTTAG+AGG | - | chr7_4:17341752-17341771 | None:intergenic | 35.0% | |
| TCTAAGTATTCCTGTCTTTC+AGG | + | chr7_4:17344317-17344336 | Msa1142690:CDS | 35.0% | |
| ACTCAACTTTACAAAAGGTG+AGG | + | chr7_4:17344663-17344682 | Msa1142690:intron | 35.0% | |
| TGCAATGTTTAGATTTGAGG+GGG | - | chr7_4:17344875-17344894 | None:intergenic | 35.0% | |
| GTGCAATGTTTAGATTTGAG+GGG | - | chr7_4:17344876-17344895 | None:intergenic | 35.0% | |
| GGTGCAATGTTTAGATTTGA+GGG | - | chr7_4:17344877-17344896 | None:intergenic | 35.0% | |
| TGGTGCAATGTTTAGATTTG+AGG | - | chr7_4:17344878-17344897 | None:intergenic | 35.0% | |
| CTGTAACATGTCATTGTCAT+TGG | - | chr7_4:17344985-17345004 | None:intergenic | 35.0% | |
| ! | ACCGAACCTCTAAAAACTAT+GGG | - | chr7_4:17343641-17343660 | None:intergenic | 35.0% |
| ! | AACCGAACCTCTAAAAACTA+TGG | - | chr7_4:17343642-17343661 | None:intergenic | 35.0% |
| !! | TAGTTTTTAGAGGTTCGGTT+CGG | + | chr7_4:17343642-17343661 | Msa1142690:intron | 35.0% |
| CTACTAGACATCATTTGTCA+GGG | - | chr7_4:17343697-17343716 | None:intergenic | 35.0% | |
| ACTACTAGACATCATTTGTC+AGG | - | chr7_4:17343698-17343717 | None:intergenic | 35.0% | |
| TGACACTTGTTCCTAAGTTT+AGG | - | chr7_4:17346652-17346671 | None:intergenic | 35.0% | |
| AACAAAGTCACAACCTGAAA+GGG | - | chr7_4:17346842-17346861 | None:intergenic | 35.0% | |
| ATGTTTATGGCTGAAATGGT+TGG | - | chr7_4:17346884-17346903 | None:intergenic | 35.0% | |
| AACCATTTCAGCCATAAACA+TGG | + | chr7_4:17346883-17346902 | Msa1142690:CDS | 35.0% | |
| ACCATTTCAGCCATAAACAT+GGG | + | chr7_4:17346884-17346903 | Msa1142690:CDS | 35.0% | |
| ATTGTCTCCTTGAAGTCTAA+TGG | + | chr7_4:17346973-17346992 | Msa1142690:CDS | 35.0% | |
| GTTCTTCAAGAGGAAAATGA+CGG | + | chr7_4:17347006-17347025 | Msa1142690:CDS | 35.0% | |
| GAGTTGCTAAAGTAAACTGT+TGG | - | chr7_4:17347188-17347207 | None:intergenic | 35.0% | |
| AAGAACGAAATGGAATCACA+AGG | - | chr7_4:17347224-17347243 | None:intergenic | 35.0% | |
| !! | ATGCAAATTTCTAGCTTGAG+AGG | - | chr7_4:17347252-17347271 | None:intergenic | 35.0% |
| TTGGATGTTGTAATTGGCAA+GGG | - | chr7_4:17347798-17347817 | None:intergenic | 35.0% | |
| CTTCTCTTGGATGTTGTAAT+TGG | - | chr7_4:17347804-17347823 | None:intergenic | 35.0% | |
| TTGGATTTAGTAATCGGTGA+TGG | - | chr7_4:17347878-17347897 | None:intergenic | 35.0% | |
| CTGCTCTTGGATTTAGTAAT+CGG | - | chr7_4:17347884-17347903 | None:intergenic | 35.0% | |
| !! | TGATGATGGCATATTGATGA+CGG | + | chr7_4:17348135-17348154 | Msa1142690:CDS | 35.0% |
| AGTCAACTGCAATGAATTCA+TGG | + | chr7_4:17348212-17348231 | Msa1142690:intron | 35.0% | |
| TGGTGAAATCAAACCAAAAC+AGG | + | chr7_4:17348232-17348251 | Msa1142690:intron | 35.0% | |
| !!! | GTGACATTTTGGAATTTTCG+TGG | + | chr7_4:17348369-17348388 | Msa1142690:CDS | 35.0% |
| GAGTAGCTAAACCTTTAGTT+TGG | + | chr7_4:17348692-17348711 | Msa1142690:intron | 35.0% | |
| TCATGGCTTAACCAAACTAA+AGG | - | chr7_4:17348706-17348725 | None:intergenic | 35.0% | |
| TAGTAATTGAGAGTAGAGAG+AGG | + | chr7_4:17349116-17349135 | Msa1142690:intron | 35.0% | |
| !! | TAAAGCAATAGCGGATTCAT+CGG | + | chr7_4:17349152-17349171 | Msa1142690:intron | 35.0% |
| TGAAATTAACACAGTCCTTG+TGG | + | chr7_4:17349311-17349330 | Msa1142690:intron | 35.0% | |
| AGAGGATGTTAAAGATGTTG+AGG | + | chr7_4:17349467-17349486 | Msa1142690:CDS | 35.0% | |
| AAAGAAACGACTACTTTCAC+TGG | + | chr7_4:17349598-17349617 | Msa1142690:intron | 35.0% | |
| CTGTAAGCAAATATACCAAG+AGG | - | chr7_4:17349625-17349644 | None:intergenic | 35.0% | |
| CTCTTGGTATATTTGCTTAC+AGG | + | chr7_4:17349623-17349642 | Msa1142690:intron | 35.0% | |
| ACACGATAGAGAAAACTAAG+AGG | + | chr7_4:17349713-17349732 | Msa1142690:CDS | 35.0% | |
| !!! | TTGTTTTGCTGTTTGATTGC+AGG | + | chr7_4:17349782-17349801 | Msa1142690:intron | 35.0% |
| TTGAAATTCTCTTGTTCACC+AGG | - | chr7_4:17349880-17349899 | None:intergenic | 35.0% | |
| TGGTGAACAAGAGAATTTCA+AGG | + | chr7_4:17349879-17349898 | Msa1142690:CDS | 35.0% | |
| !! | TCATATAGTTGGTGGACGTT+TGG | - | chr7_4:17342015-17342034 | None:intergenic | 40.0% |
| AGAAGTTGTAGAATCCTTGG+TGG | - | chr7_4:17341968-17341987 | None:intergenic | 40.0% | |
| CTGAGAAGTTGTAGAATCCT+TGG | - | chr7_4:17341965-17341984 | None:intergenic | 40.0% | |
| ATTGGCTAATAGTGGTGATC+TGG | - | chr7_4:17344573-17344592 | None:intergenic | 40.0% | |
| GATCACCACTATTAGCCAAT+CGG | + | chr7_4:17341497-17341516 | Msa1142690:intron | 40.0% | |
| ! | GTAATCCGATTGGCTAATAG+TGG | - | chr7_4:17344565-17344584 | None:intergenic | 40.0% |
| CAAATGCATACCTGAAAGAC+AGG | + | chr7_4:17341740-17341759 | Msa1142690:intron | 40.0% | |
| CTGAGAAGTTGTAGAATCCT+TGG | + | chr7_4:17341965-17341984 | Msa1142690:intron | 40.0% | |
| AGAAGTTGTAGAATCCTTGG+TGG | + | chr7_4:17341968-17341987 | Msa1142690:intron | 40.0% | |
| !! | TCATATAGTTGGTGGACGTT+TGG | + | chr7_4:17342015-17342034 | Msa1142690:intron | 40.0% |
| AGGAATCTATGGGCACTATT+AGG | + | chr7_4:17342137-17342156 | Msa1142690:intron | 40.0% | |
| ACAAACCAAAACGACACAAC+AGG | + | chr7_4:17342225-17342244 | Msa1142690:intron | 40.0% | |
| TCCGATAATTGTTTGTGGCA+AGG | - | chr7_4:17342598-17342617 | None:intergenic | 40.0% | |
| GTCAGTCCGATAATTGTTTG+TGG | - | chr7_4:17342603-17342622 | None:intergenic | 40.0% | |
| TCGGACTGACTAAGAAAATG+CGG | + | chr7_4:17342613-17342632 | Msa1142690:intron | 40.0% | |
| GTTTGGTTGTTTGTGTTGGA+AGG | - | chr7_4:17342663-17342682 | None:intergenic | 40.0% | |
| ! | CAAGGTTTGGTTGTTTGTGT+TGG | - | chr7_4:17342667-17342686 | None:intergenic | 40.0% |
| CGAAGTTGTGAAACAAGGTT+TGG | - | chr7_4:17342680-17342699 | None:intergenic | 40.0% | |
| CAAACCGAAGTTGTGAAACA+AGG | - | chr7_4:17342685-17342704 | None:intergenic | 40.0% | |
| CTTGTTTCACAACTTCGGTT+TGG | + | chr7_4:17342683-17342702 | Msa1142690:intron | 40.0% | |
| CAGTCCTAAACAAGTATCAC+AGG | + | chr7_4:17342734-17342753 | Msa1142690:intron | 40.0% | |
| ATCGCCTGTGATACTTGTTT+AGG | - | chr7_4:17342741-17342760 | None:intergenic | 40.0% | |
| !! | CAAAACTGACTTGTAAGGTG+AGG | + | chr7_4:17343088-17343107 | Msa1142690:intron | 40.0% |
| ! | TTTTCCCTCCTCATCTTATG+CGG | + | chr7_4:17343291-17343310 | Msa1142690:intron | 40.0% |
| TTGTCTCTATAGGGACATCT+TGG | - | chr7_4:17343346-17343365 | None:intergenic | 40.0% | |
| AGCCTCCTATTTCATAGGAA+CGG | - | chr7_4:17343414-17343433 | None:intergenic | 40.0% | |
| TTCCTATGAAATAGGAGGCT+CGG | + | chr7_4:17343414-17343433 | Msa1142690:intron | 40.0% | |
| !! | GCCCATAGTTTTTAGAGGTT+CGG | + | chr7_4:17343637-17343656 | Msa1142690:intron | 40.0% |
| CAAACAAGTCTTTGCCTCTA+AGG | - | chr7_4:17343798-17343817 | None:intergenic | 40.0% | |
| CAGTATAGCAGGTAGCAATA+TGG | - | chr7_4:17343965-17343984 | None:intergenic | 40.0% | |
| ! | CTATTGGTCAAAAGGTGCAA+TGG | + | chr7_4:17344239-17344258 | Msa1142690:intron | 40.0% |
| CAAATGCATACCTGAAAGAC+AGG | - | chr7_4:17341740-17341759 | None:intergenic | 40.0% | |
| ! | GTAATCCGATTGGCTAATAG+TGG | + | chr7_4:17344565-17344584 | Msa1142690:intron | 40.0% |
| GATCACCACTATTAGCCAAT+CGG | - | chr7_4:17341497-17341516 | None:intergenic | 40.0% | |
| ATTGGCTAATAGTGGTGATC+TGG | + | chr7_4:17344573-17344592 | Msa1142690:intron | 40.0% | |
| ACAATCTTCATGCGCTATCA+AGG | - | chr7_4:17345408-17345427 | None:intergenic | 40.0% | |
| ! | TTTTCCCTCCTCATCTTATG+CGG | + | chr7_4:17343291-17343310 | Msa1142690:intron | 40.0% |
| AGCCTCCTATTTCATAGGAA+CGG | - | chr7_4:17343414-17343433 | None:intergenic | 40.0% | |
| TTCCTATGAAATAGGAGGCT+CGG | + | chr7_4:17343414-17343433 | Msa1142690:intron | 40.0% | |
| !! | TGAAGGCCCATAGTTTTTAG+AGG | + | chr7_4:17346058-17346077 | Msa1142690:intron | 40.0% |
| !! | GCCCATAGTTTTTAGAGGTT+CGG | + | chr7_4:17343637-17343656 | Msa1142690:intron | 40.0% |
| CAAACAAGTCTTTGCCTCTA+AGG | - | chr7_4:17343798-17343817 | None:intergenic | 40.0% | |
| CAGTATAGCAGGTAGCAATA+TGG | - | chr7_4:17343965-17343984 | None:intergenic | 40.0% | |
| ! | CTGCAACCATGTTTTGCATT+CGG | - | chr7_4:17346751-17346770 | None:intergenic | 40.0% |
| GAATGCAAAACATGGTTGCA+GGG | + | chr7_4:17346750-17346769 | Msa1142690:CDS | 40.0% | |
| AGGGAGAAAATGAGTTACAC+TGG | + | chr7_4:17346769-17346788 | Msa1142690:CDS | 40.0% | |
| ACAAAGTCACAACCTGAAAG+GGG | - | chr7_4:17346841-17346860 | None:intergenic | 40.0% | |
| CAACAAAGTCACAACCTGAA+AGG | - | chr7_4:17346843-17346862 | None:intergenic | 40.0% | |
| CCATTTCAGCCATAAACATG+GGG | + | chr7_4:17346885-17346904 | Msa1142690:CDS | 40.0% | |
| CATTTCAGCCATAAACATGG+GGG | + | chr7_4:17346886-17346905 | Msa1142690:CDS | 40.0% | |
| TTTGAGAACCCCCATGTTTA+TGG | - | chr7_4:17346897-17346916 | None:intergenic | 40.0% | |
| AGACTTCAAGGAGACAATGA+AGG | - | chr7_4:17346971-17346990 | None:intergenic | 40.0% | |
| ! | GCAGTCAATATTTGCTGCAT+TGG | + | chr7_4:17347072-17347091 | Msa1142690:CDS | 40.0% |
| AGAGGTTCAGAAGAACGAAA+TGG | - | chr7_4:17347234-17347253 | None:intergenic | 40.0% | |
| AGAAATTTGCATAACCCCCA+TGG | + | chr7_4:17347260-17347279 | Msa1142690:CDS | 40.0% | |
| AGCAAAGAAAAGGAGATAGG+CGG | - | chr7_4:17347288-17347307 | None:intergenic | 40.0% | |
| ! | TTTTGACAAGACACAGTACC+AGG | + | chr7_4:17347721-17347740 | Msa1142690:CDS | 40.0% |
| ATGCAACGTCTGATCTTTGA+TGG | + | chr7_4:17347749-17347768 | Msa1142690:intron | 40.0% | |
| CTTGGATGTTGTAATTGGCA+AGG | - | chr7_4:17347799-17347818 | None:intergenic | 40.0% | |
| ! | TTTAGTAATCGGTGATGGTG+CGG | - | chr7_4:17347873-17347892 | None:intergenic | 40.0% |
| CGATTACTAAATCCAAGAGC+AGG | + | chr7_4:17347882-17347901 | Msa1142690:CDS | 40.0% | |
| TTCATGATAAGGGTTGCCAA+CGG | - | chr7_4:17347933-17347952 | None:intergenic | 40.0% | |
| GGCGATTGTCTTCATGATAA+GGG | - | chr7_4:17347943-17347962 | None:intergenic | 40.0% | |
| ! | TTGAGCTCTTGTTCCTGTTT+TGG | - | chr7_4:17348248-17348267 | None:intergenic | 40.0% |
| TGGCACGTTTGCTTAAACTT+GGG | - | chr7_4:17348304-17348323 | None:intergenic | 40.0% | |
| ! | TGGAGTTCATGGTGACATTT+TGG | + | chr7_4:17348358-17348377 | Msa1142690:CDS | 40.0% |
| ATGCCTTCATTAATCTGACG+TGG | - | chr7_4:17348441-17348460 | None:intergenic | 40.0% | |
| TAAATATCCAGCTGCTAGCA+AGG | + | chr7_4:17348527-17348546 | Msa1142690:intron | 40.0% | |
| AAATATCCAGCTGCTAGCAA+GGG | + | chr7_4:17348528-17348547 | Msa1142690:intron | 40.0% | |
| !! | TATTGCGATTTTGAGCACTG+AGG | + | chr7_4:17348567-17348586 | Msa1142690:intron | 40.0% |
| !! | GAGTGTTGGTATGAGATTCA+GGG | - | chr7_4:17348616-17348635 | None:intergenic | 40.0% |
| AAATCTAACCAACGGAGTGT+TGG | - | chr7_4:17348630-17348649 | None:intergenic | 40.0% | |
| CATGTGATTGCAAGAAGCTA+GGG | - | chr7_4:17348850-17348869 | None:intergenic | 40.0% | |
| TCATGTGATTGCAAGAAGCT+AGG | - | chr7_4:17348851-17348870 | None:intergenic | 40.0% | |
| AATAATCGTGGAAGCGATGT+TGG | - | chr7_4:17348998-17349017 | None:intergenic | 40.0% | |
| AGTTTGTATTTGGTTGCCCT+AGG | - | chr7_4:17349256-17349275 | None:intergenic | 40.0% | |
| !!! | GTTTTTGGTACACTTGCAAG+TGG | + | chr7_4:17349359-17349378 | Msa1142690:intron | 40.0% |
| !! | TTTATAGGTTGTGCTGGTTG+AGG | - | chr7_4:17349441-17349460 | None:intergenic | 40.0% |
| GCTTGTGTTGAGCAATTTGA+AGG | + | chr7_4:17349495-17349514 | Msa1142690:CDS | 40.0% | |
| TTGTTGCTAAGGATGTCTTC+CGG | - | chr7_4:17349549-17349568 | None:intergenic | 40.0% | |
| AAGACATCCTTAGCAACAAG+TGG | + | chr7_4:17349550-17349569 | Msa1142690:intron | 40.0% | |
| AGACATCCTTAGCAACAAGT+GGG | + | chr7_4:17349551-17349570 | Msa1142690:intron | 40.0% | |
| CTTACAGGAGAATACCCTTT+GGG | + | chr7_4:17349638-17349657 | Msa1142690:intron | 40.0% | |
| ! | GAGGTATTATGATAAGGGGT+TGG | + | chr7_4:17349732-17349751 | Msa1142690:intron | 40.0% |
| !! | ATTATGATAAGGGGTTGGTG+AGG | + | chr7_4:17349737-17349756 | Msa1142690:intron | 40.0% |
| !! | GTGAGGAGAGAGTTTTGTAT+TGG | + | chr7_4:17349754-17349773 | Msa1142690:intron | 40.0% |
| ! | ATTGCAGGTTGAAATCCAAG+TGG | + | chr7_4:17349797-17349816 | Msa1142690:intron | 40.0% |
| TGAACTCCCTAAGAATAGAG+CGG | + | chr7_4:17349936-17349955 | Msa1142690:CDS | 40.0% | |
| ATCAACACATCAAGCCACCA+AGG | + | chr7_4:17341236-17341255 | Msa1142690:five_prime_UTR | 45.0% | |
| !!! | GGTGGTCCAACGGATTTTTT+TGG | - | chr7_4:17341469-17341488 | None:intergenic | 45.0% |
| AATAGTGGTGATCTGGTAGC+AGG | - | chr7_4:17344580-17344599 | None:intergenic | 45.0% | |
| CATCTTGAGCGTAATCCGAT+TGG | - | chr7_4:17344555-17344574 | None:intergenic | 45.0% | |
| ATCAACACATCAAGCCACCA+AGG | - | chr7_4:17341236-17341255 | None:intergenic | 45.0% | |
| ! | TATCTCTCTCGCCAAGGTTT+TGG | - | chr7_4:17342456-17342475 | None:intergenic | 45.0% |
| CATTAGTATCTCTCTCGCCA+AGG | - | chr7_4:17342462-17342481 | None:intergenic | 45.0% | |
| ACAAGTATCACAGGCGATAC+AGG | + | chr7_4:17342743-17342762 | Msa1142690:intron | 45.0% | |
| TAAGCCGCATAAGATGAGGA+GGG | - | chr7_4:17343298-17343317 | None:intergenic | 45.0% | |
| CTACTAAGCCGCATAAGATG+AGG | - | chr7_4:17343302-17343321 | None:intergenic | 45.0% | |
| CTCATCTTATGCGGCTTAGT+AGG | + | chr7_4:17343300-17343319 | Msa1142690:intron | 45.0% | |
| AACCGAGCCTCCTATTTCAT+AGG | - | chr7_4:17343419-17343438 | None:intergenic | 45.0% | |
| TAGACATCATTTGTCAGGGC+CGG | - | chr7_4:17343693-17343712 | None:intergenic | 45.0% | |
| CATCTTGAGCGTAATCCGAT+TGG | + | chr7_4:17344555-17344574 | Msa1142690:intron | 45.0% | |
| AATAGTGGTGATCTGGTAGC+AGG | + | chr7_4:17344580-17344599 | Msa1142690:intron | 45.0% | |
| GCAGAGCTACATAGAGTTCA+GGG | + | chr7_4:17344784-17344803 | Msa1142690:intron | 45.0% | |
| ACCAATTAGTAGCGACCACA+GGG | - | chr7_4:17344918-17344937 | None:intergenic | 45.0% | |
| TACCAATTAGTAGCGACCAC+AGG | - | chr7_4:17344919-17344938 | None:intergenic | 45.0% | |
| TAAGCCGCATAAGATGAGGA+GGG | - | chr7_4:17343298-17343317 | None:intergenic | 45.0% | |
| CTACTAAGCCGCATAAGATG+AGG | - | chr7_4:17343302-17343321 | None:intergenic | 45.0% | |
| CTCATCTTATGCGGCTTAGT+AGG | + | chr7_4:17343300-17343319 | Msa1142690:intron | 45.0% | |
| AACCGAGCCTCCTATTTCAT+AGG | - | chr7_4:17343419-17343438 | None:intergenic | 45.0% | |
| TAGACATCATTTGTCAGGGC+CGG | - | chr7_4:17343693-17343712 | None:intergenic | 45.0% | |
| CTACCTGCTGTCCTAAACTT+AGG | + | chr7_4:17346638-17346657 | Msa1142690:CDS | 45.0% | |
| ! | GTTCCTAAGTTTAGGACAGC+AGG | - | chr7_4:17346644-17346663 | None:intergenic | 45.0% |
| ! | CCATGTTTTGCATTCGGACA+TGG | - | chr7_4:17346745-17346764 | None:intergenic | 45.0% |
| CCATGTCCGAATGCAAAACA+TGG | + | chr7_4:17346742-17346761 | Msa1142690:CDS | 45.0% | |
| CGAATGCAAAACATGGTTGC+AGG | + | chr7_4:17346749-17346768 | Msa1142690:CDS | 45.0% | |
| CCCCATGTTTATGGCTGAAA+TGG | - | chr7_4:17346888-17346907 | None:intergenic | 45.0% | |
| GTCTCCTTGAAGTCTAATGG+TGG | + | chr7_4:17346976-17346995 | Msa1142690:CDS | 45.0% | |
| GGTTCCACCATTAGACTTCA+AGG | - | chr7_4:17346983-17347002 | None:intergenic | 45.0% | |
| TGGAACCGTTGTTCTTCAAG+AGG | + | chr7_4:17346996-17347015 | Msa1142690:CDS | 45.0% | |
| ! | TGCATTGGTCCTAACTCTTC+TGG | + | chr7_4:17347087-17347106 | Msa1142690:CDS | 45.0% |
| ! | GCATTGGTCCTAACTCTTCT+GGG | + | chr7_4:17347088-17347107 | Msa1142690:CDS | 45.0% |
| TCTACATAATCACCCCGACT+AGG | + | chr7_4:17347639-17347658 | Msa1142690:CDS | 45.0% | |
| TCTGAACTCTTAACCCTCAG+GGG | - | chr7_4:17347674-17347693 | None:intergenic | 45.0% | |
| GTCTGAACTCTTAACCCTCA+GGG | - | chr7_4:17347675-17347694 | None:intergenic | 45.0% | |
| TGTCTGAACTCTTAACCCTC+AGG | - | chr7_4:17347676-17347695 | None:intergenic | 45.0% | |
| AGACACAGTAGCCAATGTGA+AGG | + | chr7_4:17347691-17347710 | Msa1142690:CDS | 45.0% | |
| TGTTGTAATTGGCAAGGGTC+AGG | - | chr7_4:17347793-17347812 | None:intergenic | 45.0% | |
| GGGCGATTGTCTTCATGATA+AGG | - | chr7_4:17347944-17347963 | None:intergenic | 45.0% | |
| GTGGCACGTTTGCTTAAACT+TGG | - | chr7_4:17348305-17348324 | None:intergenic | 45.0% | |
| TTGGAACGATGTGGAGTTCA+TGG | + | chr7_4:17348347-17348366 | Msa1142690:CDS | 45.0% | |
| ! | TTGGAATTTTCGTGGCACGA+AGG | + | chr7_4:17348377-17348396 | Msa1142690:CDS | 45.0% |
| AAAACACAACGTGCCACGAT+TGG | + | chr7_4:17348400-17348419 | Msa1142690:CDS | 45.0% | |
| GCAAGTTCATCAACCAATCG+TGG | - | chr7_4:17348416-17348435 | None:intergenic | 45.0% | |
| CTGCCACGTCAGATTAATGA+AGG | + | chr7_4:17348435-17348454 | Msa1142690:intron | 45.0% | |
| !! | GGAGTGTTGGTATGAGATTC+AGG | - | chr7_4:17348617-17348636 | None:intergenic | 45.0% |
| ATCTCATACCAACACTCCGT+TGG | + | chr7_4:17348619-17348638 | Msa1142690:intron | 45.0% | |
| AAAACCGAACTTCTCTGCCT+AGG | + | chr7_4:17349236-17349255 | Msa1142690:intron | 45.0% | |
| AAACCGAACTTCTCTGCCTA+GGG | + | chr7_4:17349237-17349256 | Msa1142690:intron | 45.0% | |
| TAGCAAGCGCGTTATACGTT+AGG | - | chr7_4:17349287-17349306 | None:intergenic | 45.0% | |
| ACGAGCAAGTGATGAGATAG+CGG | + | chr7_4:17349398-17349417 | Msa1142690:intron | 45.0% | |
| GACATCCTTAGCAACAAGTG+GGG | + | chr7_4:17349552-17349571 | Msa1142690:intron | 45.0% | |
| ACATCCTTAGCAACAAGTGG+GGG | + | chr7_4:17349553-17349572 | Msa1142690:intron | 45.0% | |
| ACTACTTTCACTGGTCCTCT+TGG | + | chr7_4:17349607-17349626 | Msa1142690:intron | 45.0% | |
| GCTTACAGGAGAATACCCTT+TGG | + | chr7_4:17349637-17349656 | Msa1142690:intron | 45.0% | |
| ATACTCCACTGAAAGGTTGC+CGG | - | chr7_4:17349676-17349695 | None:intergenic | 45.0% | |
| CTCTATCGTGTCAGAGAAGA+TGG | - | chr7_4:17349704-17349723 | None:intergenic | 45.0% | |
| AGGTTGAAATCCAAGTGGTC+CGG | + | chr7_4:17349802-17349821 | Msa1142690:intron | 45.0% | |
| ATCTACGATCACGAATAGCC+CGG | - | chr7_4:17349824-17349843 | None:intergenic | 45.0% | |
| CAAAGGCTGAAACCATACCT+TGG | + | chr7_4:17349910-17349929 | Msa1142690:CDS | 45.0% | |
| GAACTCCCTAAGAATAGAGC+GGG | + | chr7_4:17349937-17349956 | Msa1142690:CDS | 45.0% | |
| CGGATTACGCTCAAGATGTC+CGG | + | chr7_4:17341517-17341536 | Msa1142690:intron | 50.0% | |
| GCGCACAACGTGAAACACAA+GGG | - | chr7_4:17344496-17344515 | None:intergenic | 50.0% | |
| GTTGTGCGCGAAGTGTATAG+CGG | + | chr7_4:17341585-17341604 | Msa1142690:intron | 50.0% | |
| !!! | GGTAGCCTGTTGTGTCGTTT+TGG | - | chr7_4:17342233-17342252 | None:intergenic | 50.0% |
| CTAAGCCGCATAAGATGAGG+AGG | - | chr7_4:17343299-17343318 | None:intergenic | 50.0% | |
| CAGGGCCGTTCCTATGAAAT+AGG | + | chr7_4:17343406-17343425 | Msa1142690:intron | 50.0% | |
| GGCCGTTCCTATGAAATAGG+AGG | + | chr7_4:17343409-17343428 | Msa1142690:intron | 50.0% | |
| GTTGTGCGCGAAGTGTATAG+CGG | - | chr7_4:17341585-17341604 | None:intergenic | 50.0% | |
| GCGCACAACGTGAAACACAA+GGG | + | chr7_4:17344496-17344515 | Msa1142690:intron | 50.0% | |
| CGGATTACGCTCAAGATGTC+CGG | - | chr7_4:17341517-17341536 | None:intergenic | 50.0% | |
| !!! | GGTGGCCCAACGGATTTTTT+TGG | + | chr7_4:17344601-17344620 | Msa1142690:intron | 50.0% |
| GGCAGAGCTACATAGAGTTC+AGG | + | chr7_4:17344783-17344802 | Msa1142690:intron | 50.0% | |
| AGATTTGAGGGGGTTCAGCA+TGG | - | chr7_4:17344865-17344884 | None:intergenic | 50.0% | |
| ACCCTGTGGTCGCTACTAAT+TGG | + | chr7_4:17344914-17344933 | Msa1142690:intron | 50.0% | |
| TGATAATCAGTGGCGTAGCC+AGG | - | chr7_4:17345598-17345617 | None:intergenic | 50.0% | |
| CTAAGCCGCATAAGATGAGG+AGG | - | chr7_4:17343299-17343318 | None:intergenic | 50.0% | |
| !! | GTGTCTCTATAGGGGCATCT+TGG | - | chr7_4:17345771-17345790 | None:intergenic | 50.0% |
| CAGGGCCGTTCCTATGAAAT+AGG | + | chr7_4:17343406-17343425 | Msa1142690:intron | 50.0% | |
| GGCCGTTCCTATGAAATAGG+AGG | + | chr7_4:17343409-17343428 | Msa1142690:intron | 50.0% | |
| CCTGAAAGGGGACAGTAACA+TGG | - | chr7_4:17346829-17346848 | None:intergenic | 50.0% | |
| CCATGTTACTGTCCCCTTTC+AGG | + | chr7_4:17346826-17346845 | Msa1142690:CDS | 50.0% | |
| TACTCGGACCCAGAAGAGTT+AGG | - | chr7_4:17347099-17347118 | None:intergenic | 50.0% | |
| AAGGAGATAGGCGGTACCAT+GGG | - | chr7_4:17347279-17347298 | None:intergenic | 50.0% | |
| AAAGGAGATAGGCGGTACCA+TGG | - | chr7_4:17347280-17347299 | None:intergenic | 50.0% | |
| AGGGGGATCATCTTCCTAGT+CGG | - | chr7_4:17347656-17347675 | None:intergenic | 50.0% | |
| TAGGAAGATGATCCCCCTGA+GGG | + | chr7_4:17347658-17347677 | Msa1142690:CDS | 50.0% | |
| CTGAACTCTTAACCCTCAGG+GGG | - | chr7_4:17347673-17347692 | None:intergenic | 50.0% | |
| TCATCTAGTCCCCAATGAGG+CGG | - | chr7_4:17347847-17347866 | None:intergenic | 50.0% | |
| TGGTCATCTAGTCCCCAATG+AGG | - | chr7_4:17347850-17347869 | None:intergenic | 50.0% | |
| AACGGCGGTAGATGATAAGG+TGG | - | chr7_4:17347915-17347934 | None:intergenic | 50.0% | |
| ACCTTATCATCTACCGCCGT+TGG | + | chr7_4:17347914-17347933 | Msa1142690:CDS | 50.0% | |
| ATGATAAGGGTTGCCAACGG+CGG | - | chr7_4:17347930-17347949 | None:intergenic | 50.0% | |
| GAAGACAATCGCCCTATGAG+TGG | + | chr7_4:17347950-17347969 | Msa1142690:CDS | 50.0% | |
| TTTAAGCAAACGTGCCACGC+TGG | + | chr7_4:17348307-17348326 | Msa1142690:CDS | 50.0% | |
| TCATCATCGTGCCACGATAC+GGG | - | chr7_4:17348478-17348497 | None:intergenic | 50.0% | |
| CTCATCATCGTGCCACGATA+CGG | - | chr7_4:17348479-17348498 | None:intergenic | 50.0% | |
| !!! | GCGATTTTGAGCACTGAGGA+CGG | + | chr7_4:17348571-17348590 | Msa1142690:intron | 50.0% |
| ! | GAGATTCAGGGCTTGTTCCT+TGG | - | chr7_4:17348604-17348623 | None:intergenic | 50.0% |
| TTGCCCTAGGCAGAGAAGTT+CGG | - | chr7_4:17349243-17349262 | None:intergenic | 50.0% | |
| ACTAATGCAATTGCCACCGC+CGG | + | chr7_4:17349527-17349546 | Msa1142690:CDS | 50.0% | |
| TTGCTAAGGATGTCTTCCGG+CGG | - | chr7_4:17349546-17349565 | None:intergenic | 50.0% | |
| ! | TGATCCCCCACTTGTTGCTA+AGG | - | chr7_4:17349560-17349579 | None:intergenic | 50.0% |
| ! | GGAGAGCATACTCCACTGAA+AGG | - | chr7_4:17349683-17349702 | None:intergenic | 50.0% |
| GGTTGAAATCCAAGTGGTCC+GGG | + | chr7_4:17349803-17349822 | Msa1142690:intron | 50.0% | |
| CTGAGCTCCACAGCTTCATA+AGG | - | chr7_4:17349853-17349872 | None:intergenic | 50.0% | |
| CTTATGAAGCTGTGGAGCTC+AGG | + | chr7_4:17349851-17349870 | Msa1142690:CDS | 50.0% | |
| AGGCTGAAACCATACCTTGG+AGG | + | chr7_4:17349913-17349932 | Msa1142690:CDS | 50.0% | |
| TCTTAGGGAGTTCACCTCCA+AGG | - | chr7_4:17349930-17349949 | None:intergenic | 50.0% | |
| CCACTCCCGCTCTATTCTTA+GGG | - | chr7_4:17349945-17349964 | None:intergenic | 50.0% | |
| ACCACTCCCGCTCTATTCTT+AGG | - | chr7_4:17349946-17349965 | None:intergenic | 50.0% | |
| TCTGGTAGCAGGTGGTCCAA+CGG | - | chr7_4:17341479-17341498 | None:intergenic | 55.0% | |
| AGTGGTGATCTGGTAGCAGG+TGG | - | chr7_4:17344583-17344602 | None:intergenic | 55.0% | |
| AAGATGTCCGGTTCACGACG+TGG | + | chr7_4:17341529-17341548 | Msa1142690:intron | 55.0% | |
| AGATGTCCGGTTCACGACGT+GGG | + | chr7_4:17341530-17341549 | Msa1142690:intron | 55.0% | |
| CGCGCACAACGTGAAACACA+AGG | - | chr7_4:17344495-17344514 | None:intergenic | 55.0% | |
| AGCTGCAGCCACCAAAACCT+TGG | + | chr7_4:17342442-17342461 | Msa1142690:intron | 55.0% | |
| !! | CTCTCTCGCCAAGGTTTTGG+TGG | - | chr7_4:17342453-17342472 | None:intergenic | 55.0% |
| AGCGATTCCTACACTCCCCA+AGG | + | chr7_4:17343666-17343685 | Msa1142690:intron | 55.0% | |
| TTCCTACACTCCCCAAGGTC+CGG | + | chr7_4:17343671-17343690 | Msa1142690:intron | 55.0% | |
| ATTTGTCAGGGCCGGACCTT+GGG | - | chr7_4:17343685-17343704 | None:intergenic | 55.0% | |
| CGCGCACAACGTGAAACACA+AGG | + | chr7_4:17344495-17344514 | Msa1142690:intron | 55.0% | |
| AGATGTCCGGTTCTCGACGT+GGG | - | chr7_4:17344540-17344559 | None:intergenic | 55.0% | |
| AAGATGTCCGGTTCTCGACG+TGG | - | chr7_4:17344541-17344560 | None:intergenic | 55.0% | |
| AGTGGTGATCTGGTAGCAGG+TGG | + | chr7_4:17344583-17344602 | Msa1142690:intron | 55.0% | |
| AGTTTGAACCCCCTGACCCA+AGG | + | chr7_4:17345571-17345590 | Msa1142690:intron | 55.0% | |
| TTCCTGCACTTCCCAAGGTC+CGG | + | chr7_4:17346097-17346116 | Msa1142690:intron | 55.0% | |
| ATTTGTCAGGGCCGGACCTT+GGG | - | chr7_4:17343685-17343704 | None:intergenic | 55.0% | |
| AGGAGATAGGCGGTACCATG+GGG | - | chr7_4:17347278-17347297 | None:intergenic | 55.0% | |
| GGGGATCATCTTCCTAGTCG+GGG | - | chr7_4:17347654-17347673 | None:intergenic | 55.0% | |
| GGGGGATCATCTTCCTAGTC+GGG | - | chr7_4:17347655-17347674 | None:intergenic | 55.0% | |
| CTAGGAAGATGATCCCCCTG+AGG | + | chr7_4:17347657-17347676 | Msa1142690:CDS | 55.0% | |
| TCAGACGTTGCATGTGCACC+TGG | - | chr7_4:17347742-17347761 | None:intergenic | 55.0% | |
| ! | GGTGGAGGGTTGACTTCTCT+TGG | - | chr7_4:17347817-17347836 | None:intergenic | 55.0% |
| ! | AGTAATCGGTGATGGTGCGG+TGG | - | chr7_4:17347870-17347889 | None:intergenic | 55.0% |
| GGTGGATGATTGCCTGCTCT+TGG | - | chr7_4:17347897-17347916 | None:intergenic | 55.0% | |
| GCCAACGGCGGTAGATGATA+AGG | - | chr7_4:17347918-17347937 | None:intergenic | 55.0% | |
| AAACGTGCCACGCTGGTAAC+TGG | + | chr7_4:17348314-17348333 | Msa1142690:CDS | 55.0% | |
| !! | GGTAACTGGTAGTGGCACGT+TGG | + | chr7_4:17348328-17348347 | Msa1142690:CDS | 55.0% |
| AGTGGCACGTTGGAACGATG+TGG | + | chr7_4:17348338-17348357 | Msa1142690:CDS | 55.0% | |
| !! | ATGAAGGCATCGTGCCACGA+TGG | + | chr7_4:17348451-17348470 | Msa1142690:intron | 55.0% |
| TCCAGCTGCTAGCAAGGGTT+AGG | + | chr7_4:17348533-17348552 | Msa1142690:intron | 55.0% | |
| !!! | TTTTGAGCACTGAGGACGGC+AGG | + | chr7_4:17348575-17348594 | Msa1142690:intron | 55.0% |
| GGGAGTTCACCTCCAAGGTA+TGG | - | chr7_4:17349925-17349944 | None:intergenic | 55.0% | |
| CCCTAAGAATAGAGCGGGAG+TGG | + | chr7_4:17349942-17349961 | Msa1142690:CDS | 55.0% | |
| GATGTCCGGTTCACGACGTG+GGG | + | chr7_4:17341531-17341550 | Msa1142690:intron | 60.0% | |
| CACAACCCCACGTCGTGAAC+CGG | - | chr7_4:17341539-17341558 | None:intergenic | 60.0% | |
| TTTGTCAGGGCCGGACCTTG+GGG | - | chr7_4:17343684-17343703 | None:intergenic | 60.0% | |
| CATTTGTCAGGGCCGGACCT+TGG | - | chr7_4:17343686-17343705 | None:intergenic | 60.0% | |
| CACAACCCCACGTCGAGAAC+CGG | + | chr7_4:17344531-17344550 | Msa1142690:intron | 60.0% | |
| GATGTCCGGTTCTCGACGTG+GGG | - | chr7_4:17344539-17344558 | None:intergenic | 60.0% | |
| TCTGGTAGCAGGTGGCCCAA+CGG | + | chr7_4:17344591-17344610 | Msa1142690:intron | 60.0% | |
| ! | GGGTGAGAGAGGTGCAAGTG+TGG | - | chr7_4:17344898-17344917 | None:intergenic | 60.0% |
| CTTGCACCTCTCTCACCCTG+TGG | + | chr7_4:17344900-17344919 | Msa1142690:intron | 60.0% | |
| TAGCGACCACAGGGTGAGAG+AGG | - | chr7_4:17344909-17344928 | None:intergenic | 60.0% | |
| TAGCCAGGACCTTGGGTCAG+GGG | - | chr7_4:17345583-17345602 | None:intergenic | 60.0% | |
| GTAGCCAGGACCTTGGGTCA+GGG | - | chr7_4:17345584-17345603 | None:intergenic | 60.0% | |
| AGTGGCGTAGCCAGGACCTT+GGG | - | chr7_4:17345590-17345609 | None:intergenic | 60.0% | |
| AGCGCTTCCTGCACTTCCCA+AGG | + | chr7_4:17346092-17346111 | Msa1142690:intron | 60.0% | |
| CATTTGTCAGGGCCGGACCT+TGG | - | chr7_4:17343686-17343705 | None:intergenic | 60.0% | |
| GGAGATAGGCGGTACCATGG+GGG | - | chr7_4:17347277-17347296 | None:intergenic | 60.0% | |
| ACCTCGTCCTCCGCCTCATT+GGG | + | chr7_4:17347834-17347853 | Msa1142690:intron | 60.0% | |
| TCTAGTCCCCAATGAGGCGG+AGG | - | chr7_4:17347844-17347863 | None:intergenic | 60.0% | |
| GCCACGCTGGTAACTGGTAG+TGG | + | chr7_4:17348320-17348339 | Msa1142690:CDS | 60.0% | |
| GCCACTACCAGTTACCAGCG+TGG | - | chr7_4:17348324-17348343 | None:intergenic | 60.0% | |
| GCCTAACCCTTGCTAGCAGC+TGG | - | chr7_4:17348537-17348556 | None:intergenic | 60.0% | |
| CTAAGGATGTCTTCCGGCGG+TGG | - | chr7_4:17349543-17349562 | None:intergenic | 60.0% | |
| GGCGCATTACGCAGCCCAAA+GGG | - | chr7_4:17349655-17349674 | None:intergenic | 60.0% | |
| CTTTGGGCTGCGTAATGCGC+CGG | + | chr7_4:17349654-17349673 | Msa1142690:CDS | 60.0% | |
| ! | ATGCGCCGGCAACCTTTCAG+TGG | + | chr7_4:17349668-17349687 | Msa1142690:CDS | 60.0% |
| CACGAATAGCCCGGACCACT+TGG | - | chr7_4:17349815-17349834 | None:intergenic | 60.0% | |
| AACCCCCTGACCCAAGGTCC+TGG | + | chr7_4:17345577-17345596 | Msa1142690:intron | 65.0% | |
| AGCCAGGACCTTGGGTCAGG+GGG | - | chr7_4:17345582-17345601 | None:intergenic | 65.0% | |
| CGTAGCCAGGACCTTGGGTC+AGG | - | chr7_4:17345585-17345604 | None:intergenic | 65.0% | |
| CAGTGGCGTAGCCAGGACCT+TGG | - | chr7_4:17345591-17345610 | None:intergenic | 65.0% | |
| CAATGAGGCGGAGGACGAGG+TGG | - | chr7_4:17347835-17347854 | None:intergenic | 65.0% | |
| CACCTCGTCCTCCGCCTCAT+TGG | + | chr7_4:17347833-17347852 | Msa1142690:intron | 65.0% | |
| CCTCGTCCTCCGCCTCATTG+GGG | + | chr7_4:17347835-17347854 | Msa1142690:intron | 65.0% | |
| GCCACGATGGTCCCGTATCG+TGG | + | chr7_4:17348464-17348483 | Msa1142690:intron | 65.0% | |
| GCCACGATACGGGACCATCG+TGG | - | chr7_4:17348468-17348487 | None:intergenic | 65.0% | |
| CTGAGGACGGCAGGAGACCA+AGG | + | chr7_4:17348584-17348603 | Msa1142690:intron | 65.0% | |
| CGGCGCATTACGCAGCCCAA+AGG | - | chr7_4:17349656-17349675 | None:intergenic | 65.0% | |
| GCTGTGGAGCTCAGGAAGCC+TGG | + | chr7_4:17349859-17349878 | Msa1142690:CDS | 65.0% | |
| ! | GGCCGGACCTTGGGGAGTGT+AGG | - | chr7_4:17343676-17343695 | None:intergenic | 70.0% |
| ! | GGCCGGACCTTGGGAAGTGC+AGG | - | chr7_4:17346102-17346121 | None:intergenic | 70.0% |
| GAGGCGGAGGACGAGGTGGA+GGG | - | chr7_4:17347831-17347850 | None:intergenic | 70.0% | |
| TGAGGCGGAGGACGAGGTGG+AGG | - | chr7_4:17347832-17347851 | None:intergenic | 70.0% | |
| CCCCAATGAGGCGGAGGACG+AGG | - | chr7_4:17347838-17347857 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 17341196 | 17349981 | 17341196 | ID=Msa1142690;Name=Msa1142690 |
| chr7_4 | mRNA | 17341196 | 17349981 | 17341196 | ID=Msa1142690-mRNA-1;Parent=Msa1142690;Name=Msa1142690-mRNA-1;_AED=0.81;_eAED=0.81;_QI=84|0.12|0.22|0.22|0.87|0.77|9|0|590 |
| chr7_4 | exon | 17341196 | 17341274 | 17341196 | ID=Msa1142690-mRNA-1:exon:3863;Parent=Msa1142690-mRNA-1 |
| chr7_4 | exon | 17344253 | 17344338 | 17344253 | ID=Msa1142690-mRNA-1:exon:3864;Parent=Msa1142690-mRNA-1 |
| chr7_4 | exon | 17346613 | 17347281 | 17346613 | ID=Msa1142690-mRNA-1:exon:3865;Parent=Msa1142690-mRNA-1 |
| chr7_4 | exon | 17347632 | 17347742 | 17347632 | ID=Msa1142690-mRNA-1:exon:3866;Parent=Msa1142690-mRNA-1 |
| chr7_4 | exon | 17347863 | 17348156 | 17347863 | ID=Msa1142690-mRNA-1:exon:3867;Parent=Msa1142690-mRNA-1 |
| chr7_4 | exon | 17348254 | 17348441 | 17348254 | ID=Msa1142690-mRNA-1:exon:3868;Parent=Msa1142690-mRNA-1 |
| chr7_4 | exon | 17349407 | 17349568 | 17349407 | ID=Msa1142690-mRNA-1:exon:3869;Parent=Msa1142690-mRNA-1 |
| chr7_4 | exon | 17349645 | 17349734 | 17349645 | ID=Msa1142690-mRNA-1:exon:3870;Parent=Msa1142690-mRNA-1 |
| chr7_4 | exon | 17349804 | 17349981 | 17349804 | ID=Msa1142690-mRNA-1:exon:3871;Parent=Msa1142690-mRNA-1 |
| chr7_4 | five_prime_UTR | 17341196 | 17341274 | 17341196 | ID=Msa1142690-mRNA-1:five_prime_utr;Parent=Msa1142690-mRNA-1 |
| chr7_4 | five_prime_UTR | 17344253 | 17344257 | 17344253 | ID=Msa1142690-mRNA-1:five_prime_utr;Parent=Msa1142690-mRNA-1 |
| chr7_4 | CDS | 17344258 | 17344338 | 17344258 | ID=Msa1142690-mRNA-1:cds;Parent=Msa1142690-mRNA-1 |
| chr7_4 | CDS | 17346613 | 17347281 | 17346613 | ID=Msa1142690-mRNA-1:cds;Parent=Msa1142690-mRNA-1 |
| chr7_4 | CDS | 17347632 | 17347742 | 17347632 | ID=Msa1142690-mRNA-1:cds;Parent=Msa1142690-mRNA-1 |
| chr7_4 | CDS | 17347863 | 17348156 | 17347863 | ID=Msa1142690-mRNA-1:cds;Parent=Msa1142690-mRNA-1 |
| chr7_4 | CDS | 17348254 | 17348441 | 17348254 | ID=Msa1142690-mRNA-1:cds;Parent=Msa1142690-mRNA-1 |
| chr7_4 | CDS | 17349407 | 17349568 | 17349407 | ID=Msa1142690-mRNA-1:cds;Parent=Msa1142690-mRNA-1 |
| chr7_4 | CDS | 17349645 | 17349734 | 17349645 | ID=Msa1142690-mRNA-1:cds;Parent=Msa1142690-mRNA-1 |
| chr7_4 | CDS | 17349804 | 17349981 | 17349804 | ID=Msa1142690-mRNA-1:cds;Parent=Msa1142690-mRNA-1 |
| Gene Sequence |
| Protein sequence |
