Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1013650 | XP_013448021.1 | 96.117 | 412 | 16 | 0 | 1 | 412 | 1 | 412 | 0.0 | 828 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1013650 | sp|Q67ZU1|LIP2_ARATH | 60.000 | 405 | 155 | 4 | 12 | 411 | 14 | 416 | 0.0 | 521 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1013650 | A0A072TYW1 | 96.117 | 412 | 16 | 0 | 1 | 412 | 1 | 412 | 0.0 | 828 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1013650 | Msa1054930 | 0.896130 | 4.955781e-76 | -8.615850e-47 |
| Msa0881960 | Msa1013650 | 0.912521 | 1.770467e-83 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1013650 | MtrunA17_Chr7g0225611 | 96.117 | 412 | 16 | 0 | 1 | 412 | 1 | 412 | 0.0 | 828 |
| Msa1013650 | MtrunA17_Chr5g0438751 | 52.139 | 374 | 172 | 2 | 38 | 410 | 33 | 400 | 1.75e-144 | 417 |
| Msa1013650 | MtrunA17_Chr7g0250081 | 48.774 | 367 | 185 | 1 | 44 | 410 | 40 | 403 | 3.32e-134 | 390 |
| Msa1013650 | MtrunA17_Chr3g0120021 | 42.823 | 418 | 183 | 5 | 40 | 410 | 36 | 444 | 2.61e-115 | 344 |
| Msa1013650 | MtrunA17_Chr6g0462811 | 43.207 | 368 | 163 | 6 | 44 | 410 | 41 | 363 | 2.03e-107 | 321 |
| Msa1013650 | MtrunA17_Chr6g0459361 | 61.506 | 239 | 85 | 5 | 5 | 239 | 5 | 240 | 5.50e-105 | 310 |
| Msa1013650 | MtrunA17_Chr1g0207891 | 39.633 | 381 | 218 | 5 | 38 | 412 | 25 | 399 | 1.93e-101 | 307 |
| Msa1013650 | MtrunA17_Chr6g0459401 | 57.831 | 249 | 98 | 5 | 1 | 245 | 1 | 246 | 6.21e-101 | 300 |
| Msa1013650 | MtrunA17_Chr6g0459381 | 60.082 | 243 | 90 | 4 | 1 | 239 | 1 | 240 | 6.76e-101 | 300 |
| Msa1013650 | MtrunA17_Chr6g0459421 | 57.831 | 249 | 98 | 5 | 1 | 245 | 1 | 246 | 8.60e-101 | 300 |
| Msa1013650 | MtrunA17_Chr7g0250091 | 37.101 | 407 | 188 | 8 | 9 | 411 | 10 | 352 | 3.07e-87 | 269 |
| Msa1013650 | MtrunA17_Chr6g0462831 | 43.893 | 262 | 143 | 3 | 150 | 410 | 4 | 262 | 6.75e-75 | 234 |
| Msa1013650 | MtrunA17_Chr3g0120041 | 54.688 | 192 | 84 | 2 | 45 | 236 | 45 | 233 | 1.84e-71 | 225 |
| Msa1013650 | MtrunA17_Chr3g0119931 | 54.070 | 172 | 76 | 1 | 46 | 217 | 42 | 210 | 6.81e-64 | 205 |
| Msa1013650 | MtrunA17_Chr6g0459391 | 55.828 | 163 | 71 | 1 | 250 | 411 | 11 | 173 | 1.76e-61 | 196 |
| Msa1013650 | MtrunA17_Chr6g0459411 | 55.474 | 137 | 60 | 1 | 276 | 411 | 5 | 141 | 4.66e-49 | 163 |
| Msa1013650 | MtrunA17_Chr6g0459431 | 54.745 | 137 | 61 | 1 | 276 | 411 | 5 | 141 | 1.31e-47 | 159 |
| Msa1013650 | MtrunA17_Chr3g0120031 | 45.912 | 159 | 84 | 2 | 254 | 410 | 13 | 171 | 3.18e-47 | 159 |
| Msa1013650 | MtrunA17_Chr3g0119941 | 44.375 | 160 | 89 | 0 | 251 | 410 | 7 | 166 | 1.61e-42 | 147 |
| Msa1013650 | MtrunA17_Chr5g0394731 | 52.632 | 133 | 58 | 1 | 116 | 248 | 20 | 147 | 1.01e-40 | 141 |
| Msa1013650 | MtrunA17_Chr6g0459371 | 57.955 | 88 | 36 | 1 | 325 | 411 | 1 | 88 | 6.59e-30 | 111 |
| Msa1013650 | MtrunA17_Chr6g0484931 | 26.044 | 407 | 252 | 14 | 34 | 407 | 278 | 668 | 4.85e-18 | 86.7 |
| Msa1013650 | MtrunA17_Chr8g0390731 | 25.310 | 403 | 256 | 11 | 44 | 414 | 294 | 683 | 1.36e-17 | 85.1 |
| Msa1013650 | MtrunA17_Chr6g0462821 | 51.064 | 47 | 22 | 1 | 102 | 148 | 1 | 46 | 3.05e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1013650 | AT5G14180.1 | 60.000 | 405 | 155 | 4 | 12 | 411 | 14 | 416 | 0.0 | 521 |
| Msa1013650 | AT5G14180.4 | 64.194 | 310 | 111 | 0 | 102 | 411 | 7 | 316 | 2.23e-156 | 444 |
| Msa1013650 | AT5G14180.2 | 63.844 | 307 | 111 | 0 | 105 | 411 | 1 | 307 | 6.11e-154 | 437 |
| Msa1013650 | AT5G14180.3 | 59.667 | 300 | 114 | 4 | 12 | 306 | 14 | 311 | 3.95e-131 | 380 |
| Msa1013650 | AT5G14180.5 | 54.737 | 285 | 120 | 5 | 12 | 289 | 14 | 296 | 6.37e-110 | 325 |
| Msa1013650 | AT2G15230.1 | 38.187 | 364 | 215 | 4 | 47 | 410 | 32 | 385 | 3.32e-92 | 283 |
| Msa1013650 | AT1G73920.2 | 25.191 | 393 | 245 | 10 | 44 | 402 | 223 | 600 | 1.86e-18 | 88.2 |
| Msa1013650 | AT1G73920.1 | 25.191 | 393 | 245 | 10 | 44 | 402 | 292 | 669 | 2.36e-18 | 87.8 |
| Msa1013650 | AT1G18460.1 | 25.635 | 394 | 242 | 14 | 44 | 402 | 290 | 667 | 4.26e-17 | 84.0 |
Find 96 sgRNAs with CRISPR-Local
Find 337 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATGATCTGCTAGAATTAA+AGG | 0.174183 | 7_1:-20621803 | None:intergenic |
| TGCTCATGCTGATTACATTA+TGG | 0.187385 | 7_1:+20624485 | Msa1013650:CDS |
| AAACAGATCACTACACTATT+TGG | 0.227174 | 7_1:+20623246 | Msa1013650:intron |
| CTTCTATGTTCTTACCCTTT+AGG | 0.233695 | 7_1:-20623285 | None:intergenic |
| GTTGCAGCCAAATCCTTTAT+TGG | 0.270019 | 7_1:+20623021 | Msa1013650:CDS |
| AGTATTTACCTCACCAATAA+AGG | 0.285153 | 7_1:-20623034 | None:intergenic |
| CAGATCATGGCTTTGATGTT+TGG | 0.292443 | 7_1:+20621816 | Msa1013650:CDS |
| TACCTCACCAATAAAGGATT+TGG | 0.301945 | 7_1:-20623028 | None:intergenic |
| TACCTTCTGGAATCCTTTGC+AGG | 0.303254 | 7_1:-20619007 | None:intergenic |
| GCTCATGCTGATTACATTAT+GGG | 0.304433 | 7_1:+20624486 | Msa1013650:CDS |
| ATATGTGTATTTCTTACAAT+AGG | 0.314683 | 7_1:-20618256 | None:intergenic |
| ATGTTATTACCTGAAGTTCT+TGG | 0.316168 | 7_1:-20618530 | None:intergenic |
| GTGTAAATATGCAGGCCTTT+TGG | 0.322829 | 7_1:+20622626 | Msa1013650:intron |
| AAGTCGTAGCAGTCAATTCT+AGG | 0.324029 | 7_1:-20623437 | None:intergenic |
| GCTTCTGCTGTCATTGTTCA+TGG | 0.326523 | 7_1:+20618498 | Msa1013650:CDS |
| GTAAGAAATACACATATAAA+AGG | 0.329004 | 7_1:+20618262 | Msa1013650:five_prime_UTR |
| ATTAAAGGCAAGTCTTGTTC+TGG | 0.333137 | 7_1:-20621788 | None:intergenic |
| GAAAGAAAGTGAAATGAAAA+AGG | 0.340300 | 7_1:-20618233 | None:intergenic |
| GATTATGTGTTTAGCCAAAC+AGG | 0.355642 | 7_1:+20622697 | Msa1013650:CDS |
| GCTTCAAGTCGTGTCTCCTT+TGG | 0.358205 | 7_1:+20618429 | Msa1013650:CDS |
| CAAATTTAATGCTATGTACT+AGG | 0.361127 | 7_1:+20624602 | Msa1013650:three_prime_UTR |
| TCCTTTGGAAGAAATCAAAA+TGG | 0.378214 | 7_1:+20618444 | Msa1013650:CDS |
| TTGAAGGTTACAACTAAAGA+TGG | 0.383740 | 7_1:+20618972 | Msa1013650:intron |
| GACTTGATGACTGCATTAAC+TGG | 0.384778 | 7_1:+20623455 | Msa1013650:CDS |
| ATACAAATGCCAAGAACTTC+AGG | 0.389343 | 7_1:+20618521 | Msa1013650:CDS |
| ATGTTGAGAATTTACTTGAT+AGG | 0.389542 | 7_1:+20624412 | Msa1013650:CDS |
| TATGTGTATTTCTTACAATA+GGG | 0.395124 | 7_1:-20618255 | None:intergenic |
| GGTAGAGTTGAAGGTAGAAA+TGG | 0.395667 | 7_1:+20619026 | Msa1013650:CDS |
| CTACCTTCAACTCTACCTTC+TGG | 0.406112 | 7_1:-20619020 | None:intergenic |
| AAATGGTGTTAGCCCTCCTT+TGG | 0.406335 | 7_1:+20618461 | Msa1013650:CDS |
| ATGTGGCTTAGATAAGCAAT+AGG | 0.409857 | 7_1:-20622979 | None:intergenic |
| CTAGCAGAATTTAATCCTAA+AGG | 0.421609 | 7_1:+20623270 | Msa1013650:CDS |
| CCTTTAATTCTAGCAGATCA+TGG | 0.423751 | 7_1:+20621803 | Msa1013650:CDS |
| TAGCAGAATTTAATCCTAAA+GGG | 0.427487 | 7_1:+20623271 | Msa1013650:CDS |
| ACATAAACATACTGGGTTAG+AGG | 0.428314 | 7_1:-20621891 | None:intergenic |
| TTCTTTGTTGATGTTGATTG+AGG | 0.434847 | 7_1:-20623624 | None:intergenic |
| TAGTGCATTATGTTATAATC+TGG | 0.439008 | 7_1:-20624288 | None:intergenic |
| GTTAGCCCTCCTTTGGATGA+AGG | 0.456402 | 7_1:+20618468 | Msa1013650:CDS |
| GACTTGAGAAAGGCATCAAC+AGG | 0.457432 | 7_1:-20623401 | None:intergenic |
| ATTCCAGAAGGTAGAGTTGA+AGG | 0.468226 | 7_1:+20619017 | Msa1013650:CDS |
| CATAAACATACTGGGTTAGA+GGG | 0.468329 | 7_1:-20621890 | None:intergenic |
| AAGGTAGAAATGGTGGGACT+AGG | 0.475923 | 7_1:+20619036 | Msa1013650:CDS |
| TAATTACGTTGGCCACTCTC+TGG | 0.476171 | 7_1:+20622729 | Msa1013650:CDS |
| GATTATAACATAATGCACTA+TGG | 0.477158 | 7_1:+20624291 | Msa1013650:CDS |
| AACAAAGAACATGGTGCACT+TGG | 0.480584 | 7_1:+20623638 | Msa1013650:CDS |
| ATGTTGGATAGGTTATATAT+TGG | 0.480961 | 7_1:-20624327 | None:intergenic |
| TTGGATAGGTTATATATTGG+TGG | 0.488015 | 7_1:-20624324 | None:intergenic |
| ATACCTCTCTTCATTAGCTA+TGG | 0.502974 | 7_1:+20624360 | Msa1013650:CDS |
| GCTATGTACTAGGTTGTCAT+TGG | 0.503802 | 7_1:+20624612 | Msa1013650:three_prime_UTR |
| AGGTATATCATGTGGAATGT+TGG | 0.504399 | 7_1:-20624343 | None:intergenic |
| AGAGTTGAAGGTAGAAATGG+TGG | 0.507614 | 7_1:+20619029 | Msa1013650:CDS |
| ATAAAGCTGCTGATTTCAGC+TGG | 0.510041 | 7_1:-20622951 | None:intergenic |
| AGCCACATGAACACTGCACT+TGG | 0.518331 | 7_1:+20622994 | Msa1013650:CDS |
| TACTTCTCTTATCAACATCA+TGG | 0.520662 | 7_1:-20624443 | None:intergenic |
| TTCATAGAACTTGATAGTCT+AGG | 0.524020 | 7_1:-20624578 | None:intergenic |
| GCTTTAGCTTCCTTCTCTGA+AGG | 0.525067 | 7_1:+20622916 | Msa1013650:CDS |
| TGGATAGGTTATATATTGGT+GGG | 0.529275 | 7_1:-20624323 | None:intergenic |
| GAGACCAACATGGTTTCTCT+AGG | 0.529963 | 7_1:+20618345 | Msa1013650:exon |
| GATATTACAACATGGAGTAT+TGG | 0.531184 | 7_1:+20619070 | Msa1013650:CDS |
| AACTATGCAGTTGTTAGACG+TGG | 0.537740 | 7_1:+20624237 | Msa1013650:intron |
| ACACGACTTGAAGCTTGATA+AGG | 0.543173 | 7_1:-20618420 | None:intergenic |
| TGGTGGGACTAGGAAACAAC+CGG | 0.545655 | 7_1:+20619046 | Msa1013650:CDS |
| TATCATGTGGAATGTTGGAT+AGG | 0.547791 | 7_1:-20624338 | None:intergenic |
| AGCCAAATCCTTTATTGGTG+AGG | 0.551660 | 7_1:+20623026 | Msa1013650:CDS |
| GTCCCAAGACCAATTCCAAA+AGG | 0.554581 | 7_1:-20622641 | None:intergenic |
| CTCATGCTGATTACATTATG+GGG | 0.555559 | 7_1:+20624487 | Msa1013650:CDS |
| TGTGGCTTAGATAAGCAATA+GGG | 0.559261 | 7_1:-20622978 | None:intergenic |
| TGAAGGTTACAACTAAAGAT+GGG | 0.560420 | 7_1:+20618973 | Msa1013650:intron |
| TAGTCGCCGACATGTCTCAT+TGG | 0.565789 | 7_1:+20621865 | Msa1013650:CDS |
| AAAGGCAAGTCTTGTTCTGG+AGG | 0.567063 | 7_1:-20621785 | None:intergenic |
| CCTCTCTTCATTAGCTATGG+AGG | 0.571727 | 7_1:+20624363 | Msa1013650:CDS |
| AGCACAGAGAGACTTGAGAA+AGG | 0.572980 | 7_1:-20623411 | None:intergenic |
| GCACATATGCCTTCATCCAA+AGG | 0.576347 | 7_1:-20618477 | None:intergenic |
| CACCAAGTGCAGTGTTCATG+TGG | 0.576864 | 7_1:-20622996 | None:intergenic |
| GTTTGGATTGCTAACACAAG+AGG | 0.581774 | 7_1:+20621833 | Msa1013650:CDS |
| ATTACAACATGGAGTATTGG+TGG | 0.587960 | 7_1:+20619073 | Msa1013650:CDS |
| ACTATGCAGTTGTTAGACGT+GGG | 0.595087 | 7_1:+20624238 | Msa1013650:intron |
| ACTCCATGTTGTAATATCAC+CGG | 0.596325 | 7_1:-20619065 | None:intergenic |
| GGGCAGAAAATTAATTACGT+TGG | 0.599333 | 7_1:+20622718 | Msa1013650:CDS |
| AAGGCAAGTCTTGTTCTGGA+GGG | 0.605642 | 7_1:-20621784 | None:intergenic |
| GGGTGCAGGATGGCATGACA+TGG | 0.627156 | 7_1:+20621753 | Msa1013650:intron |
| CATATGCCTTCATCCAAAGG+AGG | 0.627342 | 7_1:-20618474 | None:intergenic |
| ATGAAGAGAGGTATATCATG+TGG | 0.628119 | 7_1:-20624351 | None:intergenic |
| AGGGGTCCAATGAGACATGT+CGG | 0.633111 | 7_1:-20621871 | None:intergenic |
| ATATGCCTTCATCCAAAGGA+GGG | 0.644823 | 7_1:-20618473 | None:intergenic |
| ATTATGTGTTTAGCCAAACA+GGG | 0.645703 | 7_1:+20622698 | Msa1013650:CDS |
| CTATGCAGTTGTTAGACGTG+GGG | 0.648539 | 7_1:+20624239 | Msa1013650:intron |
| AGTAATGGAGTACCAGAGAG+TGG | 0.649875 | 7_1:-20622741 | None:intergenic |
| CCTCCATAGCTAATGAAGAG+AGG | 0.650648 | 7_1:-20624363 | None:intergenic |
| CAACCGGTGATATTACAACA+TGG | 0.652027 | 7_1:+20619062 | Msa1013650:CDS |
| ATAAACATACTGGGTTAGAG+GGG | 0.656553 | 7_1:-20621889 | None:intergenic |
| ATCAACATCAACAAAGAACA+TGG | 0.657345 | 7_1:+20623629 | Msa1013650:CDS |
| AGCCTGCAAAGGATTCCAGA+AGG | 0.663410 | 7_1:+20619005 | Msa1013650:CDS |
| GAGTTGAAGGTAGAAATGGT+GGG | 0.680227 | 7_1:+20619030 | Msa1013650:CDS |
| GAAGCCTAGAGAAACCATGT+TGG | 0.694754 | 7_1:-20618349 | None:intergenic |
| AGCTCATAGAGAGACCAACA+TGG | 0.737781 | 7_1:+20618335 | Msa1013650:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATAAAATATTAATT+GGG | - | chr7_1:20623353-20623372 | None:intergenic | 0.0% |
| !! | TATATATATAAAATATTAAT+TGG | - | chr7_1:20623354-20623373 | None:intergenic | 0.0% |
| !! | TATATCTTCATAAAAAATTA+TGG | + | chr7_1:20620868-20620887 | Msa1013650:intron | 10.0% |
| !! | AATAATAATAAAATGATTTG+TGG | - | chr7_1:20621211-20621230 | None:intergenic | 10.0% |
| !!! | CATAATTTTATACATAAAAA+AGG | + | chr7_1:20623189-20623208 | Msa1013650:intron | 10.0% |
| !! | TATAGTAAAAATGTTTATAT+TGG | - | chr7_1:20623512-20623531 | None:intergenic | 10.0% |
| !!! | GAAAATAGAAAATATTTTCA+TGG | - | chr7_1:20618606-20618625 | None:intergenic | 15.0% |
| !!! | TTTTCATTTCTTAAAATTTG+TGG | + | chr7_1:20618621-20618640 | Msa1013650:intron | 15.0% |
| !!! | CATGCATTTTATTATATTTT+TGG | - | chr7_1:20619132-20619151 | None:intergenic | 15.0% |
| !! | TATATAAGTTTATAAAATGG+AGG | + | chr7_1:20619296-20619315 | Msa1013650:intron | 15.0% |
| !!! | TAAAGTTTTTTTCCAATAAA+TGG | + | chr7_1:20620300-20620319 | Msa1013650:intron | 15.0% |
| !!! | AAAGTTTTTTTCCAATAAAT+GGG | + | chr7_1:20620301-20620320 | Msa1013650:intron | 15.0% |
| !! | TGAATGAAATTCAATAAATA+AGG | + | chr7_1:20620528-20620547 | Msa1013650:intron | 15.0% |
| !! | GAATGAAATTCAATAAATAA+GGG | + | chr7_1:20620529-20620548 | Msa1013650:intron | 15.0% |
| !! | TAATTGTTAATTAGAAGAAA+TGG | - | chr7_1:20621180-20621199 | None:intergenic | 15.0% |
| !! | ATTACTATTACATTAATTAG+AGG | - | chr7_1:20621629-20621648 | None:intergenic | 15.0% |
| !! | TAATGTAATAGTAATAGTAT+AGG | + | chr7_1:20621634-20621653 | Msa1013650:intron | 15.0% |
| !! | ATTACTATTACATTAATTAG+AGG | - | chr7_1:20621629-20621648 | None:intergenic | 15.0% |
| !! | TCTAATTAATGTAATAGTAA+TGG | + | chr7_1:20621628-20621647 | Msa1013650:intron | 15.0% |
| !!! | AATATTTTTTTGTTTGTTTG+AGG | + | chr7_1:20621925-20621944 | Msa1013650:intron | 15.0% |
| !!! | TTTGTTTATGCTTATTTTTA+AGG | + | chr7_1:20622023-20622042 | Msa1013650:intron | 15.0% |
| !!! | TACAATAAAGGTTTTTTTTT+TGG | - | chr7_1:20622488-20622507 | None:intergenic | 15.0% |
| !! | TTAAGGATTTATTACAATAA+AGG | - | chr7_1:20622500-20622519 | None:intergenic | 15.0% |
| !! | AAAAATTTATGTATTAGAGA+AGG | - | chr7_1:20622561-20622580 | None:intergenic | 15.0% |
| !! | TAAGAATTATAATTGATTGA+TGG | + | chr7_1:20623887-20623906 | Msa1013650:intron | 15.0% |
| !! | CTAACATTTAATTAGATATT+TGG | + | chr7_1:20624117-20624136 | Msa1013650:intron | 15.0% |
| !! | TATGTGTATTTCTTACAATA+GGG | - | chr7_1:20618258-20618277 | None:intergenic | 20.0% |
| !! | ATATGTGTATTTCTTACAAT+AGG | - | chr7_1:20618259-20618278 | None:intergenic | 20.0% |
| !! | GTAAGAAATACACATATAAA+AGG | + | chr7_1:20618262-20618281 | Msa1013650:five_prime_UTR | 20.0% |
| !!! | TAATTTTGAATAGTATGAGA+TGG | - | chr7_1:20618312-20618331 | None:intergenic | 20.0% |
| !! | TTTATCTGGATATGAAAAAA+AGG | - | chr7_1:20619190-20619209 | None:intergenic | 20.0% |
| !! | AAAAATGTAACCATAAAACT+TGG | + | chr7_1:20619671-20619690 | Msa1013650:intron | 20.0% |
| !!! | AAAATAATAGCCAAGTTTTA+TGG | - | chr7_1:20619684-20619703 | None:intergenic | 20.0% |
| !!! | CATTTTTCTCTTAGATATTT+TGG | - | chr7_1:20619716-20619735 | None:intergenic | 20.0% |
| !!! | TTCGTTGTTATTTAATCAAA+GGG | - | chr7_1:20620116-20620135 | None:intergenic | 20.0% |
| !!! | ATTCGTTGTTATTTAATCAA+AGG | - | chr7_1:20620117-20620136 | None:intergenic | 20.0% |
| !!! | TTTTTGGTGAAAAAATTGTT+AGG | - | chr7_1:20620171-20620190 | None:intergenic | 20.0% |
| !!! | CATATTTTTGTGTTACTTTT+CGG | + | chr7_1:20620237-20620256 | Msa1013650:intron | 20.0% |
| !! | CCACTAATTACATTTAATAA+GGG | - | chr7_1:20620497-20620516 | None:intergenic | 20.0% |
| !! | TCCACTAATTACATTTAATA+AGG | - | chr7_1:20620498-20620517 | None:intergenic | 20.0% |
| !! | ATAAAGAGAATGTTGTTATA+AGG | - | chr7_1:20621035-20621054 | None:intergenic | 20.0% |
| !! | AAGGAATGTATGTATATATA+TGG | + | chr7_1:20621601-20621620 | Msa1013650:intron | 20.0% |
| !! | AGGAATGTATGTATATATAT+GGG | + | chr7_1:20621602-20621621 | Msa1013650:intron | 20.0% |
| !! | TAATGTAATAGTAATGGTAT+AGG | + | chr7_1:20621680-20621699 | Msa1013650:intron | 20.0% |
| !! | CAAAAAAACATAAACATACT+GGG | - | chr7_1:20621901-20621920 | None:intergenic | 20.0% |
| !! | ACAAAAAAACATAAACATAC+TGG | - | chr7_1:20621902-20621921 | None:intergenic | 20.0% |
| !!! | ATGCTTATTTTTAAGGAAAA+TGG | + | chr7_1:20622030-20622049 | Msa1013650:intron | 20.0% |
| !! | TGAAGACTATTCAAATATTT+AGG | - | chr7_1:20622057-20622076 | None:intergenic | 20.0% |
| !!! | TAATTTTGACTTGTATTTGT+AGG | - | chr7_1:20622126-20622145 | None:intergenic | 20.0% |
| !! | AATTATGTTAAATAAGTAGC+TGG | - | chr7_1:20622255-20622274 | None:intergenic | 20.0% |
| !! | GAAAATGCTAACAATAAAAT+TGG | - | chr7_1:20622358-20622377 | None:intergenic | 20.0% |
| !! | TCCTTAAATTATTTATTGTG+TGG | + | chr7_1:20622376-20622395 | Msa1013650:intron | 20.0% |
| !! | ACCACACAATAAATAATTTA+AGG | - | chr7_1:20622380-20622399 | None:intergenic | 20.0% |
| !! | AATTAAAACTGTTAGAAACA+AGG | + | chr7_1:20622407-20622426 | Msa1013650:intron | 20.0% |
| !! | AAGATACACTAATTTCATTA+AGG | - | chr7_1:20622517-20622536 | None:intergenic | 20.0% |
| !! | TCATGTAAAAAAGTAAGTAA+TGG | - | chr7_1:20622759-20622778 | None:intergenic | 20.0% |
| !! | GACAAATAGAAAGTAAAAAA+GGG | - | chr7_1:20622858-20622877 | None:intergenic | 20.0% |
| !! | AGACAAATAGAAAGTAAAAA+AGG | - | chr7_1:20622859-20622878 | None:intergenic | 20.0% |
| !! | TTGGTCAAAGTAAAATATTT+GGG | - | chr7_1:20623493-20623512 | None:intergenic | 20.0% |
| !! | ATTGGTCAAAGTAAAATATT+TGG | - | chr7_1:20623494-20623513 | None:intergenic | 20.0% |
| !! | ATAATTTGATCTCTATATGT+TGG | + | chr7_1:20623992-20624011 | Msa1013650:intron | 20.0% |
| ! | GAAAGAAAGTGAAATGAAAA+AGG | - | chr7_1:20618236-20618255 | None:intergenic | 25.0% |
| ! | TAGAATTTAGTTGGACAAAT+TGG | - | chr7_1:20618786-20618805 | None:intergenic | 25.0% |
| ! | AATTAAATGTTTATCCCTTG+TGG | - | chr7_1:20618870-20618889 | None:intergenic | 25.0% |
| !! | TTGCAATCTTAACTTTTTGA+AGG | + | chr7_1:20618956-20618975 | Msa1013650:intron | 25.0% |
| ! | GGAAAAAAAAGACATTTATC+TGG | - | chr7_1:20619204-20619223 | None:intergenic | 25.0% |
| ! | TTTATAAAATGGAGGACATA+AGG | + | chr7_1:20619304-20619323 | Msa1013650:intron | 25.0% |
| ! | TTATAAAATGGAGGACATAA+GGG | + | chr7_1:20619305-20619324 | Msa1013650:intron | 25.0% |
| ! | TTTGTCACCATGTTAAAATA+TGG | - | chr7_1:20619507-20619526 | None:intergenic | 25.0% |
| !!! | TACACCAATTTTTAGAGAAA+GGG | - | chr7_1:20619611-20619630 | None:intergenic | 25.0% |
| !!! | TTACACCAATTTTTAGAGAA+AGG | - | chr7_1:20619612-20619631 | None:intergenic | 25.0% |
| ! | TCTAAGAGAAAAATGACATA+TGG | + | chr7_1:20619721-20619740 | Msa1013650:intron | 25.0% |
| !! | TTGATAATCTGAAGATTGTT+AGG | + | chr7_1:20619802-20619821 | Msa1013650:intron | 25.0% |
| ! | TTCCAGTCAAAATTCTAATA+TGG | + | chr7_1:20619852-20619871 | Msa1013650:intron | 25.0% |
| !!! | ATCCATATTAGAATTTTGAC+TGG | - | chr7_1:20619857-20619876 | None:intergenic | 25.0% |
| ! | AGTCAAAATTCTAATATGGA+TGG | + | chr7_1:20619856-20619875 | Msa1013650:intron | 25.0% |
| ! | CGAAAAGTAACACAAAAATA+TGG | - | chr7_1:20620239-20620258 | None:intergenic | 25.0% |
| !! | TTTTCGGCAAATATTAATCA+TGG | + | chr7_1:20620253-20620272 | Msa1013650:intron | 25.0% |
| ! | AGAATAAGATTCCCATTTAT+TGG | - | chr7_1:20620315-20620334 | None:intergenic | 25.0% |
| !!! | AGTGATAACCCTTAATTTTT+TGG | + | chr7_1:20620337-20620356 | Msa1013650:intron | 25.0% |
| ! | TTTCTCCTCCAAAAAATTAA+GGG | - | chr7_1:20620348-20620367 | None:intergenic | 25.0% |
| ! | ATTTCTCCTCCAAAAAATTA+AGG | - | chr7_1:20620349-20620368 | None:intergenic | 25.0% |
| ! | AAGTTTGTGCATGATTATTA+AGG | + | chr7_1:20620415-20620434 | Msa1013650:intron | 25.0% |
| ! | GCATGATTATTAAGGAAAAA+TGG | + | chr7_1:20620423-20620442 | Msa1013650:intron | 25.0% |
| ! | CCCTTATTAAATGTAATTAG+TGG | + | chr7_1:20620494-20620513 | Msa1013650:intron | 25.0% |
| ! | AAAAGTAATAAATGCTGCAT+TGG | + | chr7_1:20620568-20620587 | Msa1013650:intron | 25.0% |
| !!! | TTTTTTGAACGAATGAGAAA+AGG | + | chr7_1:20620680-20620699 | Msa1013650:intron | 25.0% |
| !!! | TGCTTTGTTCTTCATTTTAT+TGG | + | chr7_1:20620729-20620748 | Msa1013650:intron | 25.0% |
| ! | AACTTCAAATAAATCATGCT+AGG | + | chr7_1:20620953-20620972 | Msa1013650:intron | 25.0% |
| ! | GTTTATATACGATGTGAATT+TGG | + | chr7_1:20621091-20621110 | Msa1013650:intron | 25.0% |
| !!! | GTTTACATTATTGATTTGCT+AGG | - | chr7_1:20621132-20621151 | None:intergenic | 25.0% |
| ! | GTAATAATCAAGACCATAAT+CGG | - | chr7_1:20621480-20621499 | None:intergenic | 25.0% |
| ! | TAATCTAGGTCTGTATATTT+GGG | - | chr7_1:20621531-20621550 | None:intergenic | 25.0% |
| ! | ATAATCTAGGTCTGTATATT+TGG | - | chr7_1:20621532-20621551 | None:intergenic | 25.0% |
| !!! | TACATACATTCCTTTGTTTT+TGG | - | chr7_1:20621595-20621614 | None:intergenic | 25.0% |
| !! | ATAGTATAGGAGTATGTATA+TGG | + | chr7_1:20621647-20621666 | Msa1013650:intron | 25.0% |
| !! | TAGTATAGGAGTATGTATAT+GGG | + | chr7_1:20621648-20621667 | Msa1013650:intron | 25.0% |
| ! | GAATAGTCTTCAACATAAAA+CGG | + | chr7_1:20622065-20622084 | Msa1013650:intron | 25.0% |
| ! | AATAGTCTTCAACATAAAAC+GGG | + | chr7_1:20622066-20622085 | Msa1013650:intron | 25.0% |
| ! | TAATTTGACCTAAAAACAAG+AGG | + | chr7_1:20622163-20622182 | Msa1013650:intron | 25.0% |
| ! | CAGAAAGTCTCAATAATAAA+TGG | - | chr7_1:20622607-20622626 | None:intergenic | 25.0% |
| !! | ACTTTCTATTTGTCTAAAAC+TGG | + | chr7_1:20622864-20622883 | Msa1013650:intron | 25.0% |
| ! | TAGCAGAATTTAATCCTAAA+GGG | + | chr7_1:20623271-20623290 | Msa1013650:CDS | 25.0% |
| ! | GACAATTTCTTATGTTACAT+TGG | - | chr7_1:20623313-20623332 | None:intergenic | 25.0% |
| !! | ACAACAATTTTTACCTGAAT+TGG | - | chr7_1:20623565-20623584 | None:intergenic | 25.0% |
| !!! | TCGTGATTATTGTGTTATTT+TGG | + | chr7_1:20623695-20623714 | Msa1013650:intron | 25.0% |
| !!! | TTGGTGTTTTTTCTTTCAAT+CGG | + | chr7_1:20624011-20624030 | Msa1013650:intron | 25.0% |
| !! | TTTATTTGTGTTACTGACTA+AGG | + | chr7_1:20624189-20624208 | Msa1013650:intron | 25.0% |
| ! | TAGTGCATTATGTTATAATC+TGG | - | chr7_1:20624291-20624310 | None:intergenic | 25.0% |
| ! | GATTATAACATAATGCACTA+TGG | + | chr7_1:20624291-20624310 | Msa1013650:CDS | 25.0% |
| ! | ATGTTGGATAGGTTATATAT+TGG | - | chr7_1:20624330-20624349 | None:intergenic | 25.0% |
| ! | ATGTTGAGAATTTACTTGAT+AGG | + | chr7_1:20624412-20624431 | Msa1013650:CDS | 25.0% |
| ! | CAAATTTAATGCTATGTACT+AGG | + | chr7_1:20624602-20624621 | Msa1013650:three_prime_UTR | 25.0% |
| ! | TCCTTTGGAAGAAATCAAAA+TGG | + | chr7_1:20618444-20618463 | Msa1013650:CDS | 30.0% |
| !!! | ACCATTTTGATTTCTTCCAA+AGG | - | chr7_1:20618448-20618467 | None:intergenic | 30.0% |
| ATGTTATTACCTGAAGTTCT+TGG | - | chr7_1:20618533-20618552 | None:intergenic | 30.0% | |
| AAACCACATTCATTAGATTG+AGG | - | chr7_1:20618680-20618699 | None:intergenic | 30.0% | |
| TCAATCTAATGAATGTGGTT+TGG | + | chr7_1:20618679-20618698 | Msa1013650:intron | 30.0% | |
| TTCAACGAGTAGAATTTAGT+TGG | - | chr7_1:20618795-20618814 | None:intergenic | 30.0% | |
| TAAGATTTGACTGGATATGT+CGG | + | chr7_1:20618840-20618859 | Msa1013650:intron | 30.0% | |
| ! | ATTAGCATGTGATTTTGCAA+TGG | + | chr7_1:20618909-20618928 | Msa1013650:intron | 30.0% |
| TTGAAGGTTACAACTAAAGA+TGG | + | chr7_1:20618972-20618991 | Msa1013650:intron | 30.0% | |
| TGAAGGTTACAACTAAAGAT+GGG | + | chr7_1:20618973-20618992 | Msa1013650:intron | 30.0% | |
| GATATTACAACATGGAGTAT+TGG | + | chr7_1:20619070-20619089 | Msa1013650:CDS | 30.0% | |
| GAAAAAAGTTACACAAACAG+TGG | - | chr7_1:20619168-20619187 | None:intergenic | 30.0% | |
| AAATATGGAGTTTGGTTAAG+TGG | - | chr7_1:20619492-20619511 | None:intergenic | 30.0% | |
| CCATGTTAAAATATGGAGTT+TGG | - | chr7_1:20619500-20619519 | None:intergenic | 30.0% | |
| !!! | CCAAACTCCATATTTTAACA+TGG | + | chr7_1:20619497-20619516 | Msa1013650:intron | 30.0% |
| !! | ACACCAATTTTTAGAGAAAG+GGG | - | chr7_1:20619610-20619629 | None:intergenic | 30.0% |
| ! | GAAAATTGACTCATGAGATT+AGG | - | chr7_1:20619747-20619766 | None:intergenic | 30.0% |
| TCCAGCATTTATCAAATGAT+TGG | + | chr7_1:20619884-20619903 | Msa1013650:intron | 30.0% | |
| CCAGCATTTATCAAATGATT+GGG | + | chr7_1:20619885-20619904 | Msa1013650:intron | 30.0% | |
| TTGGGAGTTAAATAACAACT+TGG | + | chr7_1:20619903-20619922 | Msa1013650:intron | 30.0% | |
| TGGGAGTTAAATAACAACTT+GGG | + | chr7_1:20619904-20619923 | Msa1013650:intron | 30.0% | |
| GGTTAAGGATCAAATATAGT+AGG | + | chr7_1:20619974-20619993 | Msa1013650:intron | 30.0% | |
| !!! | GATAACCCTTAATTTTTTGG+AGG | + | chr7_1:20620340-20620359 | Msa1013650:intron | 30.0% |
| GACTATAATTTAGAGACAGA+GGG | - | chr7_1:20620390-20620409 | None:intergenic | 30.0% | |
| ! | CAAAGCATTAAGAATACCAA+TGG | - | chr7_1:20620716-20620735 | None:intergenic | 30.0% |
| TATAAGGTAACTCGTATGTA+CGG | - | chr7_1:20621019-20621038 | None:intergenic | 30.0% | |
| CGTCTATTTAAATCCCAAAA+AGG | - | chr7_1:20621281-20621300 | None:intergenic | 30.0% | |
| AGTCTCTTCTAACTTAACTA+AGG | - | chr7_1:20621358-20621377 | None:intergenic | 30.0% | |
| ! | TTATGGTCTTGATTATTACG+TGG | + | chr7_1:20621481-20621500 | Msa1013650:intron | 30.0% |
| !! | GTTGTTTCTTCCAAAAACAA+AGG | + | chr7_1:20621582-20621601 | Msa1013650:intron | 30.0% |
| TATCTGAACATAATACAACG+TGG | + | chr7_1:20621732-20621751 | Msa1013650:intron | 30.0% | |
| ATCTGAACATAATACAACGT+GGG | + | chr7_1:20621733-20621752 | Msa1013650:intron | 30.0% | |
| ATTACCAACTCTTTCTCTTT+AGG | - | chr7_1:20622190-20622209 | None:intergenic | 30.0% | |
| TGTTAGAAACAAGGTTAGAT+TGG | + | chr7_1:20622416-20622435 | Msa1013650:intron | 30.0% | |
| AACACATAATCAAAAACAGC+AGG | - | chr7_1:20622688-20622707 | None:intergenic | 30.0% | |
| ATTATGTGTTTAGCCAAACA+GGG | + | chr7_1:20622698-20622717 | Msa1013650:CDS | 30.0% | |
| ! | AATTAATTTTCTGCCCTGTT+TGG | - | chr7_1:20622714-20622733 | None:intergenic | 30.0% |
| ! | TCTATTTGTCTAAAACTGGA+AGG | + | chr7_1:20622868-20622887 | Msa1013650:intron | 30.0% |
| ! | AATCAATTTTCCTTCAGAGA+AGG | - | chr7_1:20622929-20622948 | None:intergenic | 30.0% |
| AGTATTTACCTCACCAATAA+AGG | - | chr7_1:20623037-20623056 | None:intergenic | 30.0% | |
| GCACAAAAACATTGTATTGA+AGG | - | chr7_1:20623167-20623186 | None:intergenic | 30.0% | |
| AAATAGTGTAGTGATCTGTT+TGG | - | chr7_1:20623247-20623266 | None:intergenic | 30.0% | |
| AAACAGATCACTACACTATT+TGG | + | chr7_1:20623246-20623265 | Msa1013650:intron | 30.0% | |
| CTAGCAGAATTTAATCCTAA+AGG | + | chr7_1:20623270-20623289 | Msa1013650:CDS | 30.0% | |
| ! | ACAATTTTTACCTGAATTGG+TGG | - | chr7_1:20623562-20623581 | None:intergenic | 30.0% |
| ! | TTCTTTGTTGATGTTGATTG+AGG | - | chr7_1:20623627-20623646 | None:intergenic | 30.0% |
| ATCAACATCAACAAAGAACA+TGG | + | chr7_1:20623629-20623648 | Msa1013650:CDS | 30.0% | |
| AGAGGTGAAAATCTTACTTT+GGG | - | chr7_1:20623664-20623683 | None:intergenic | 30.0% | |
| TAGAGGTGAAAATCTTACTT+TGG | - | chr7_1:20623665-20623684 | None:intergenic | 30.0% | |
| ATCACGAGTTAAATAAGTAG+AGG | - | chr7_1:20623682-20623701 | None:intergenic | 30.0% | |
| !!! | TGCTAACATTTTTTGCATGA+CGG | - | chr7_1:20623812-20623831 | None:intergenic | 30.0% |
| !! | AATCGGTTGAATTTTGAGAA+GGG | - | chr7_1:20624063-20624082 | None:intergenic | 30.0% |
| AACATCGAAGAATGTATTGA+TGG | + | chr7_1:20624092-20624111 | Msa1013650:intron | 30.0% | |
| TGGATAGGTTATATATTGGT+GGG | - | chr7_1:20624326-20624345 | None:intergenic | 30.0% | |
| TTGGATAGGTTATATATTGG+TGG | - | chr7_1:20624327-20624346 | None:intergenic | 30.0% | |
| TACTTCTCTTATCAACATCA+TGG | - | chr7_1:20624446-20624465 | None:intergenic | 30.0% | |
| ! | TTCATAGAACTTGATAGTCT+AGG | - | chr7_1:20624581-20624600 | None:intergenic | 30.0% |
| ATACAAATGCCAAGAACTTC+AGG | + | chr7_1:20618521-20618540 | Msa1013650:CDS | 35.0% | |
| TCCTACGAATACCTCTAATT+CGG | + | chr7_1:20618562-20618581 | Msa1013650:intron | 35.0% | |
| ! | TCATGGAGTCTAAGATTTGA+CGG | - | chr7_1:20618589-20618608 | None:intergenic | 35.0% |
| TGAGATTTGGCTGAACTAAT+TGG | - | chr7_1:20618733-20618752 | None:intergenic | 35.0% | |
| CCAAATCTCACTCATTAAGT+GGG | + | chr7_1:20618743-20618762 | Msa1013650:intron | 35.0% | |
| TTCAACGACTAAGATTTGAC+TGG | + | chr7_1:20618831-20618850 | Msa1013650:intron | 35.0% | |
| ACTCCATGTTGTAATATCAC+CGG | - | chr7_1:20619068-20619087 | None:intergenic | 35.0% | |
| !! | ATTACAACATGGAGTATTGG+TGG | + | chr7_1:20619073-20619092 | Msa1013650:CDS | 35.0% |
| ! | TTTTCCTTCTCTTTTTCCTG+TGG | + | chr7_1:20619218-20619237 | Msa1013650:intron | 35.0% |
| ATGCACTATCATTACTTGTG+AGG | + | chr7_1:20619445-20619464 | Msa1013650:intron | 35.0% | |
| TAACATGGTGACAAAAAGTG+CGG | + | chr7_1:20619512-20619531 | Msa1013650:intron | 35.0% | |
| CCCAATCATTTGATAAATGC+TGG | - | chr7_1:20619888-20619907 | None:intergenic | 35.0% | |
| AACAACTTGGGCTAATCATT+TGG | + | chr7_1:20619916-20619935 | Msa1013650:intron | 35.0% | |
| TTGGGCTAATCATTTGGTTA+AGG | + | chr7_1:20619922-20619941 | Msa1013650:intron | 35.0% | |
| !!! | GCGTGATAGTACTGTTTTTT+TGG | - | chr7_1:20620187-20620206 | None:intergenic | 35.0% |
| CGACTATAATTTAGAGACAG+AGG | - | chr7_1:20620391-20620410 | None:intergenic | 35.0% | |
| ! | AAAAGGACTGATTTCTCCAT+TGG | + | chr7_1:20620697-20620716 | Msa1013650:intron | 35.0% |
| AATCATGCTAGGAAATTCAG+AGG | + | chr7_1:20620964-20620983 | Msa1013650:intron | 35.0% | |
| TTGCTAGGTTTAAGTGTTAG+TGG | - | chr7_1:20621117-20621136 | None:intergenic | 35.0% | |
| ! | ACTAATCCTTCAAGCCTTTT+TGG | + | chr7_1:20621264-20621283 | Msa1013650:intron | 35.0% |
| ! | CTAATCCTTCAAGCCTTTTT+GGG | + | chr7_1:20621265-20621284 | Msa1013650:intron | 35.0% |
| TAAATCCCAAAAAGGCTTGA+AGG | - | chr7_1:20621273-20621292 | None:intergenic | 35.0% | |
| ! | GGTGATTTCAAGTACAAGTT+GGG | - | chr7_1:20621459-20621478 | None:intergenic | 35.0% |
| ! | GTACTTGAAATCACCGATTA+TGG | + | chr7_1:20621464-20621483 | Msa1013650:intron | 35.0% |
| !! | ATTAAAGGCAAGTCTTGTTC+TGG | - | chr7_1:20621791-20621810 | None:intergenic | 35.0% |
| CCATGATCTGCTAGAATTAA+AGG | - | chr7_1:20621806-20621825 | None:intergenic | 35.0% | |
| CCTTTAATTCTAGCAGATCA+TGG | + | chr7_1:20621803-20621822 | Msa1013650:CDS | 35.0% | |
| ! | ATAAACATACTGGGTTAGAG+GGG | - | chr7_1:20621892-20621911 | None:intergenic | 35.0% |
| ! | CATAAACATACTGGGTTAGA+GGG | - | chr7_1:20621893-20621912 | None:intergenic | 35.0% |
| ! | ACATAAACATACTGGGTTAG+AGG | - | chr7_1:20621894-20621913 | None:intergenic | 35.0% |
| !!! | CTTTAGGACCTCTTGTTTTT+AGG | - | chr7_1:20622174-20622193 | None:intergenic | 35.0% |
| GACTTTCTGTGTAAATATGC+AGG | + | chr7_1:20622618-20622637 | Msa1013650:intron | 35.0% | |
| AAAAACAGCAGGTAGATCAT+AGG | - | chr7_1:20622677-20622696 | None:intergenic | 35.0% | |
| GATTATGTGTTTAGCCAAAC+AGG | + | chr7_1:20622697-20622716 | Msa1013650:CDS | 35.0% | |
| GGGCAGAAAATTAATTACGT+TGG | + | chr7_1:20622718-20622737 | Msa1013650:CDS | 35.0% | |
| TGTGGCTTAGATAAGCAATA+GGG | - | chr7_1:20622981-20623000 | None:intergenic | 35.0% | |
| ATGTGGCTTAGATAAGCAAT+AGG | - | chr7_1:20622982-20623001 | None:intergenic | 35.0% | |
| TACCTCACCAATAAAGGATT+TGG | - | chr7_1:20623031-20623050 | None:intergenic | 35.0% | |
| ATAGTACACCAAGTGAAACA+CGG | + | chr7_1:20623095-20623114 | Msa1013650:intron | 35.0% | |
| ! | TTTGAGTTTCCGACACATAT+TGG | - | chr7_1:20623140-20623159 | None:intergenic | 35.0% |
| CTTCTATGTTCTTACCCTTT+AGG | - | chr7_1:20623288-20623307 | None:intergenic | 35.0% | |
| !! | TGAATTTTGAGAAGGGAGTT+GGG | - | chr7_1:20624056-20624075 | None:intergenic | 35.0% |
| !! | TTGAATTTTGAGAAGGGAGT+TGG | - | chr7_1:20624057-20624076 | None:intergenic | 35.0% |
| !! | CAATCGGTTGAATTTTGAGA+AGG | - | chr7_1:20624064-20624083 | None:intergenic | 35.0% |
| CTTCTCAAAATTCAACCGAT+TGG | + | chr7_1:20624062-20624081 | Msa1013650:intron | 35.0% | |
| TCAAAATTCAACCGATTGGA+AGG | + | chr7_1:20624066-20624085 | Msa1013650:intron | 35.0% | |
| ! | TCGATGTTTTTCCTTCCAAT+CGG | - | chr7_1:20624080-20624099 | None:intergenic | 35.0% |
| TATCATGTGGAATGTTGGAT+AGG | - | chr7_1:20624341-20624360 | None:intergenic | 35.0% | |
| AGGTATATCATGTGGAATGT+TGG | - | chr7_1:20624346-20624365 | None:intergenic | 35.0% | |
| ! | ATGAAGAGAGGTATATCATG+TGG | - | chr7_1:20624354-20624373 | None:intergenic | 35.0% |
| ATACCTCTCTTCATTAGCTA+TGG | + | chr7_1:20624360-20624379 | Msa1013650:CDS | 35.0% | |
| ! | TGCTCATGCTGATTACATTA+TGG | + | chr7_1:20624485-20624504 | Msa1013650:CDS | 35.0% |
| ! | GCTCATGCTGATTACATTAT+GGG | + | chr7_1:20624486-20624505 | Msa1013650:CDS | 35.0% |
| ! | CTCATGCTGATTACATTATG+GGG | + | chr7_1:20624487-20624506 | Msa1013650:CDS | 35.0% |
| ACACGACTTGAAGCTTGATA+AGG | - | chr7_1:20618423-20618442 | None:intergenic | 40.0% | |
| ATATGCCTTCATCCAAAGGA+GGG | - | chr7_1:20618476-20618495 | None:intergenic | 40.0% | |
| ! | CATGGAGTCTAAGATTTGAC+GGG | - | chr7_1:20618588-20618607 | None:intergenic | 40.0% |
| CGACCTCAATCTAATGAATG+TGG | + | chr7_1:20618674-20618693 | Msa1013650:intron | 40.0% | |
| TGAACTAATTGGATACGCAG+AGG | - | chr7_1:20618722-20618741 | None:intergenic | 40.0% | |
| GCCAAATCTCACTCATTAAG+TGG | + | chr7_1:20618742-20618761 | Msa1013650:intron | 40.0% | |
| CCCACTTAATGAGTGAGATT+TGG | - | chr7_1:20618746-20618765 | None:intergenic | 40.0% | |
| ATTCCAGAAGGTAGAGTTGA+AGG | + | chr7_1:20619017-20619036 | Msa1013650:CDS | 40.0% | |
| GGTAGAGTTGAAGGTAGAAA+TGG | + | chr7_1:20619026-20619045 | Msa1013650:CDS | 40.0% | |
| AGAGTTGAAGGTAGAAATGG+TGG | + | chr7_1:20619029-20619048 | Msa1013650:CDS | 40.0% | |
| GAGTTGAAGGTAGAAATGGT+GGG | + | chr7_1:20619030-20619049 | Msa1013650:CDS | 40.0% | |
| CAACCGGTGATATTACAACA+TGG | + | chr7_1:20619062-20619081 | Msa1013650:CDS | 40.0% | |
| !! | ATGGAGTATTGGTGGTAAGT+TGG | + | chr7_1:20619081-20619100 | Msa1013650:intron | 40.0% |
| CTAATGCTAAAAGCTACCAC+AGG | - | chr7_1:20619237-20619256 | None:intergenic | 40.0% | |
| ! | CGTCCCCTTTCTCTAAAAAT+TGG | + | chr7_1:20619604-20619623 | Msa1013650:intron | 40.0% |
| CAGGAGCAACAACATGTTAA+TGG | + | chr7_1:20620992-20621011 | Msa1013650:intron | 40.0% | |
| ! | CGGTGATTTCAAGTACAAGT+TGG | - | chr7_1:20621460-20621479 | None:intergenic | 40.0% |
| GATTATTACGTGGTCAAGCA+TGG | + | chr7_1:20621491-20621510 | Msa1013650:intron | 40.0% | |
| ACAAAACTTGCCTACTCTTG+TGG | - | chr7_1:20621564-20621583 | None:intergenic | 40.0% | |
| !! | CAGATCATGGCTTTGATGTT+TGG | + | chr7_1:20621816-20621835 | Msa1013650:CDS | 40.0% |
| GTTTGGATTGCTAACACAAG+AGG | + | chr7_1:20621833-20621852 | Msa1013650:CDS | 40.0% | |
| AGGTCCTAAAGAGAAAGAGT+TGG | + | chr7_1:20622183-20622202 | Msa1013650:intron | 40.0% | |
| ! | GTGTAAATATGCAGGCCTTT+TGG | + | chr7_1:20622626-20622645 | Msa1013650:intron | 40.0% |
| !!! | ATATGCAGGCCTTTTGGAAT+TGG | + | chr7_1:20622632-20622651 | Msa1013650:intron | 40.0% |
| TAAAACTGGAAGGCTGTGTT+TGG | + | chr7_1:20622878-20622897 | Msa1013650:intron | 40.0% | |
| !! | ATAAAGCTGCTGATTTCAGC+TGG | - | chr7_1:20622954-20622973 | None:intergenic | 40.0% |
| GTTGCAGCCAAATCCTTTAT+TGG | + | chr7_1:20623021-20623040 | Msa1013650:CDS | 40.0% | |
| AGCCAAATCCTTTATTGGTG+AGG | + | chr7_1:20623026-20623045 | Msa1013650:CDS | 40.0% | |
| AACAATGTCCGTGTTTCACT+TGG | - | chr7_1:20623106-20623125 | None:intergenic | 40.0% | |
| TCTCAGACACCAATATGTGT+CGG | + | chr7_1:20623128-20623147 | Msa1013650:intron | 40.0% | |
| AAGTCGTAGCAGTCAATTCT+AGG | - | chr7_1:20623440-20623459 | None:intergenic | 40.0% | |
| ! | GACTTGATGACTGCATTAAC+TGG | + | chr7_1:20623455-20623474 | Msa1013650:CDS | 40.0% |
| TACGTAAATGCCACCAATTC+AGG | + | chr7_1:20623549-20623568 | Msa1013650:intron | 40.0% | |
| AACAAAGAACATGGTGCACT+TGG | + | chr7_1:20623638-20623657 | Msa1013650:CDS | 40.0% | |
| !! | GAATTTTGAGAAGGGAGTTG+GGG | - | chr7_1:20624055-20624074 | None:intergenic | 40.0% |
| AACTATGCAGTTGTTAGACG+TGG | + | chr7_1:20624237-20624256 | Msa1013650:intron | 40.0% | |
| ACTATGCAGTTGTTAGACGT+GGG | + | chr7_1:20624238-20624257 | Msa1013650:intron | 40.0% | |
| GCTATGTACTAGGTTGTCAT+TGG | + | chr7_1:20624612-20624631 | Msa1013650:three_prime_UTR | 40.0% | |
| AGCTCATAGAGAGACCAACA+TGG | + | chr7_1:20618335-20618354 | Msa1013650:exon | 45.0% | |
| GAGACCAACATGGTTTCTCT+AGG | + | chr7_1:20618345-20618364 | Msa1013650:exon | 45.0% | |
| GAAGCCTAGAGAAACCATGT+TGG | - | chr7_1:20618352-20618371 | None:intergenic | 45.0% | |
| ! | AAATGGTGTTAGCCCTCCTT+TGG | + | chr7_1:20618461-20618480 | Msa1013650:CDS | 45.0% |
| CATATGCCTTCATCCAAAGG+AGG | - | chr7_1:20618477-20618496 | None:intergenic | 45.0% | |
| GCACATATGCCTTCATCCAA+AGG | - | chr7_1:20618480-20618499 | None:intergenic | 45.0% | |
| GCTTCTGCTGTCATTGTTCA+TGG | + | chr7_1:20618498-20618517 | Msa1013650:CDS | 45.0% | |
| !! | GCCGAATTAGAGGTATTCGT+AGG | - | chr7_1:20618566-20618585 | None:intergenic | 45.0% |
| ! | TGAATGTGGTTTGGCTGAAC+AGG | + | chr7_1:20618688-20618707 | Msa1013650:intron | 45.0% |
| GATATGTCGGACAACCACAA+GGG | + | chr7_1:20618853-20618872 | Msa1013650:intron | 45.0% | |
| ! | GGTACATTTTGAGCCTGCAA+AGG | + | chr7_1:20618994-20619013 | Msa1013650:CDS | 45.0% |
| !! | TACCTTCTGGAATCCTTTGC+AGG | - | chr7_1:20619010-20619029 | None:intergenic | 45.0% |
| CTACCTTCAACTCTACCTTC+TGG | - | chr7_1:20619023-20619042 | None:intergenic | 45.0% | |
| ! | AAGGTAGAAATGGTGGGACT+AGG | + | chr7_1:20619036-20619055 | Msa1013650:CDS | 45.0% |
| GCTACCACAGGAAAAAGAGA+AGG | - | chr7_1:20619225-20619244 | None:intergenic | 45.0% | |
| ATTCCGCGTCTGTTACATTG+TGG | + | chr7_1:20619536-20619555 | Msa1013650:intron | 45.0% | |
| AAAATGTTAACCAGTGCCCC+CGG | + | chr7_1:20619945-20619964 | Msa1013650:intron | 45.0% | |
| TCTTGTTAACCAGTGTTCCG+GGG | - | chr7_1:20620093-20620112 | None:intergenic | 45.0% | |
| ! | GTCTTGTTAACCAGTGTTCC+GGG | - | chr7_1:20620094-20620113 | None:intergenic | 45.0% |
| !! | GGTCTTGTTAACCAGTGTTC+CGG | - | chr7_1:20620095-20620114 | None:intergenic | 45.0% |
| ! | GACAGAGGGAGTATGAGAAA+AGG | - | chr7_1:20620376-20620395 | None:intergenic | 45.0% |
| !! | AGGAAATTCAGAGGAGTGTC+AGG | + | chr7_1:20620973-20620992 | Msa1013650:intron | 45.0% |
| ACATAATACAACGTGGGTGC+AGG | + | chr7_1:20621739-20621758 | Msa1013650:intron | 45.0% | |
| !! | AAGGCAAGTCTTGTTCTGGA+GGG | - | chr7_1:20621787-20621806 | None:intergenic | 45.0% |
| !! | AAAGGCAAGTCTTGTTCTGG+AGG | - | chr7_1:20621788-20621807 | None:intergenic | 45.0% |
| !!! | AGGCCTTTTGGAATTGGTCT+TGG | + | chr7_1:20622638-20622657 | Msa1013650:intron | 45.0% |
| !!! | GGCCTTTTGGAATTGGTCTT+GGG | + | chr7_1:20622639-20622658 | Msa1013650:intron | 45.0% |
| GTCCCAAGACCAATTCCAAA+AGG | - | chr7_1:20622644-20622663 | None:intergenic | 45.0% | |
| TAATTACGTTGGCCACTCTC+TGG | + | chr7_1:20622729-20622748 | Msa1013650:CDS | 45.0% | |
| ! | AGTAATGGAGTACCAGAGAG+TGG | - | chr7_1:20622744-20622763 | None:intergenic | 45.0% |
| ! | GCTTTAGCTTCCTTCTCTGA+AGG | + | chr7_1:20622916-20622935 | Msa1013650:CDS | 45.0% |
| !! | GACTTGAGAAAGGCATCAAC+AGG | - | chr7_1:20623404-20623423 | None:intergenic | 45.0% |
| AGCACAGAGAGACTTGAGAA+AGG | - | chr7_1:20623414-20623433 | None:intergenic | 45.0% | |
| CTATGCAGTTGTTAGACGTG+GGG | + | chr7_1:20624239-20624258 | Msa1013650:intron | 45.0% | |
| CCTCCATAGCTAATGAAGAG+AGG | - | chr7_1:20624366-20624385 | None:intergenic | 45.0% | |
| CCTCTCTTCATTAGCTATGG+AGG | + | chr7_1:20624363-20624382 | Msa1013650:CDS | 45.0% | |
| !! | AAATATATAAGTTTATAAAA+TGG | + | chr7_1:20619293-20619312 | Msa1013650:intron | 5.0% |
| !! | TATATATAAAATATTAATTG+GGG | - | chr7_1:20623352-20623371 | None:intergenic | 5.0% |
| !! | ATTATAATTGAAATATTTAA+AGG | - | chr7_1:20623977-20623996 | None:intergenic | 5.0% |
| GCTTCAAGTCGTGTCTCCTT+TGG | + | chr7_1:20618429-20618448 | Msa1013650:CDS | 50.0% | |
| GTTAGCCCTCCTTTGGATGA+AGG | + | chr7_1:20618468-20618487 | Msa1013650:CDS | 50.0% | |
| ! | GATTTGACGGGCCGAATTAG+AGG | - | chr7_1:20618576-20618595 | None:intergenic | 50.0% |
| ! | TGTGGTTTGGCTGAACAGGT+TGG | + | chr7_1:20618692-20618711 | Msa1013650:intron | 50.0% |
| GACAAATTGGACGACTGCAG+TGG | - | chr7_1:20618773-20618792 | None:intergenic | 50.0% | |
| GGATATGTCGGACAACCACA+AGG | + | chr7_1:20618852-20618871 | Msa1013650:intron | 50.0% | |
| AGCCTGCAAAGGATTCCAGA+AGG | + | chr7_1:20619005-20619024 | Msa1013650:CDS | 50.0% | |
| TGGTGGGACTAGGAAACAAC+CGG | + | chr7_1:20619046-20619065 | Msa1013650:CDS | 50.0% | |
| ACGCCACAATGTAACAGACG+CGG | - | chr7_1:20619542-20619561 | None:intergenic | 50.0% | |
| AAATGTTAACCAGTGCCCCC+GGG | + | chr7_1:20619946-20619965 | Msa1013650:intron | 50.0% | |
| TTGATCCTTAACCTGTGCCC+CGG | - | chr7_1:20619967-20619986 | None:intergenic | 50.0% | |
| ACTTGCCTACTCTTGTGGCA+GGG | - | chr7_1:20621559-20621578 | None:intergenic | 50.0% | |
| AACTTGCCTACTCTTGTGGC+AGG | - | chr7_1:20621560-20621579 | None:intergenic | 50.0% | |
| AATACAACGTGGGTGCAGGA+TGG | + | chr7_1:20621743-20621762 | Msa1013650:intron | 50.0% | |
| TAGTCGCCGACATGTCTCAT+TGG | + | chr7_1:20621865-20621884 | Msa1013650:CDS | 50.0% | |
| AGGGGTCCAATGAGACATGT+CGG | - | chr7_1:20621874-20621893 | None:intergenic | 50.0% | |
| AGCCACATGAACACTGCACT+TGG | + | chr7_1:20622994-20623013 | Msa1013650:CDS | 50.0% | |
| CACCAAGTGCAGTGTTCATG+TGG | - | chr7_1:20622999-20623018 | None:intergenic | 50.0% | |
| AATGTTAACCAGTGCCCCCG+GGG | + | chr7_1:20619947-20619966 | Msa1013650:intron | 55.0% | |
| TGATCCTTAACCTGTGCCCC+GGG | - | chr7_1:20619966-20619985 | None:intergenic | 55.0% | |
| GACTTCCTTAACCAGTGCCC+CGG | + | chr7_1:20620073-20620092 | Msa1013650:intron | 55.0% | |
| GTGGCAGGGCTGCATAATCT+AGG | - | chr7_1:20621545-20621564 | None:intergenic | 55.0% | |
| ACTGGAAGGCTGTGTTTGGC+AGG | + | chr7_1:20622882-20622901 | Msa1013650:intron | 55.0% | |
| CTGGAAGGCTGTGTTTGGCA+GGG | + | chr7_1:20622883-20622902 | Msa1013650:intron | 55.0% | |
| AGAAGGGAGTTGGGGCACAT+TGG | - | chr7_1:20624047-20624066 | None:intergenic | 55.0% | |
| ATCCTTAACCTGTGCCCCGG+GGG | - | chr7_1:20619964-20619983 | None:intergenic | 60.0% | |
| GATCCTTAACCTGTGCCCCG+GGG | - | chr7_1:20619965-20619984 | None:intergenic | 60.0% | |
| !! | GTGTTCCGGGGCACTGGTTA+AGG | - | chr7_1:20620081-20620100 | None:intergenic | 60.0% |
| TAACCAGTGCCCCGGAACAC+TGG | + | chr7_1:20620081-20620100 | Msa1013650:intron | 60.0% | |
| TAACCAGTGTTCCGGGGCAC+TGG | - | chr7_1:20620087-20620106 | None:intergenic | 60.0% | |
| TGCAGCCCTGCCACAAGAGT+AGG | + | chr7_1:20621551-20621570 | Msa1013650:intron | 60.0% | |
| GGGTGCAGGATGGCATGACA+TGG | + | chr7_1:20621753-20621772 | Msa1013650:intron | 60.0% | |
| GGGAGTTGGGGCACATTGGT+CGG | - | chr7_1:20624043-20624062 | None:intergenic | 60.0% | |
| TGCCCCCGGGGCACAGGTTA+AGG | + | chr7_1:20619959-20619978 | Msa1013650:intron | 70.0% | |
| AACCAGTGCCCCCGGGGCAC+AGG | + | chr7_1:20619953-20619972 | Msa1013650:intron | 75.0% | |
| ! | AACCTGTGCCCCGGGGGCAC+TGG | - | chr7_1:20619958-20619977 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 20618222 | 20624686 | 20618222 | ID=Msa1013650;Name=Msa1013650 |
| chr7_1 | mRNA | 20618222 | 20624686 | 20618222 | ID=Msa1013650-mRNA-1;Parent=Msa1013650;Name=Msa1013650-mRNA-1;_AED=0.13;_eAED=0.13;_QI=132|1|1|1|1|1|9|114|414 |
| chr7_1 | exon | 20618222 | 20618542 | 20618222 | ID=Msa1013650-mRNA-1:exon:4915;Parent=Msa1013650-mRNA-1 |
| chr7_1 | exon | 20618978 | 20619094 | 20618978 | ID=Msa1013650-mRNA-1:exon:4916;Parent=Msa1013650-mRNA-1 |
| chr7_1 | exon | 20621761 | 20621901 | 20621761 | ID=Msa1013650-mRNA-1:exon:4917;Parent=Msa1013650-mRNA-1 |
| chr7_1 | exon | 20622640 | 20622750 | 20622640 | ID=Msa1013650-mRNA-1:exon:4918;Parent=Msa1013650-mRNA-1 |
| chr7_1 | exon | 20622904 | 20623047 | 20622904 | ID=Msa1013650-mRNA-1:exon:4919;Parent=Msa1013650-mRNA-1 |
| chr7_1 | exon | 20623252 | 20623292 | 20623252 | ID=Msa1013650-mRNA-1:exon:4920;Parent=Msa1013650-mRNA-1 |
| chr7_1 | exon | 20623397 | 20623476 | 20623397 | ID=Msa1013650-mRNA-1:exon:4921;Parent=Msa1013650-mRNA-1 |
| chr7_1 | exon | 20623571 | 20623666 | 20623571 | ID=Msa1013650-mRNA-1:exon:4922;Parent=Msa1013650-mRNA-1 |
| chr7_1 | exon | 20624247 | 20624686 | 20624247 | ID=Msa1013650-mRNA-1:exon:4923;Parent=Msa1013650-mRNA-1 |
| chr7_1 | five_prime_UTR | 20618222 | 20618353 | 20618222 | ID=Msa1013650-mRNA-1:five_prime_utr;Parent=Msa1013650-mRNA-1 |
| chr7_1 | CDS | 20618354 | 20618542 | 20618354 | ID=Msa1013650-mRNA-1:cds;Parent=Msa1013650-mRNA-1 |
| chr7_1 | CDS | 20618978 | 20619094 | 20618978 | ID=Msa1013650-mRNA-1:cds;Parent=Msa1013650-mRNA-1 |
| chr7_1 | CDS | 20621761 | 20621901 | 20621761 | ID=Msa1013650-mRNA-1:cds;Parent=Msa1013650-mRNA-1 |
| chr7_1 | CDS | 20622640 | 20622750 | 20622640 | ID=Msa1013650-mRNA-1:cds;Parent=Msa1013650-mRNA-1 |
| chr7_1 | CDS | 20622904 | 20623047 | 20622904 | ID=Msa1013650-mRNA-1:cds;Parent=Msa1013650-mRNA-1 |
| chr7_1 | CDS | 20623252 | 20623292 | 20623252 | ID=Msa1013650-mRNA-1:cds;Parent=Msa1013650-mRNA-1 |
| chr7_1 | CDS | 20623397 | 20623476 | 20623397 | ID=Msa1013650-mRNA-1:cds;Parent=Msa1013650-mRNA-1 |
| chr7_1 | CDS | 20623571 | 20623666 | 20623571 | ID=Msa1013650-mRNA-1:cds;Parent=Msa1013650-mRNA-1 |
| chr7_1 | CDS | 20624247 | 20624572 | 20624247 | ID=Msa1013650-mRNA-1:cds;Parent=Msa1013650-mRNA-1 |
| chr7_1 | three_prime_UTR | 20624573 | 20624686 | 20624573 | ID=Msa1013650-mRNA-1:three_prime_utr;Parent=Msa1013650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
