Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1054930 | XP_013448021.1 | 88.107 | 412 | 17 | 1 | 1 | 380 | 1 | 412 | 0.0 | 743 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1054930 | sp|Q67ZU1|LIP2_ARATH | 53.580 | 405 | 149 | 5 | 12 | 379 | 14 | 416 | 3.54e-155 | 446 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1054930 | A0A072TYW1 | 88.107 | 412 | 17 | 1 | 1 | 380 | 1 | 412 | 0.0 | 743 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1013650 | Msa1054930 | 0.896130 | 4.955781e-76 | -8.615850e-47 |
| Msa0335360 | Msa1054930 | 0.805359 | 1.386927e-49 | -8.615850e-47 |
| Msa0881960 | Msa1054930 | 0.870407 | 1.493563e-66 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1054930 | MtrunA17_Chr7g0225611 | 88.107 | 412 | 17 | 1 | 1 | 380 | 1 | 412 | 0.0 | 743 |
| Msa1054930 | MtrunA17_Chr5g0438751 | 47.059 | 374 | 159 | 3 | 38 | 378 | 33 | 400 | 1.62e-121 | 357 |
| Msa1054930 | MtrunA17_Chr7g0250081 | 43.869 | 367 | 171 | 2 | 44 | 378 | 40 | 403 | 2.40e-111 | 331 |
| Msa1054930 | MtrunA17_Chr6g0459361 | 61.506 | 239 | 85 | 5 | 5 | 239 | 5 | 240 | 1.50e-105 | 311 |
| Msa1054930 | MtrunA17_Chr6g0459401 | 57.831 | 249 | 98 | 5 | 1 | 245 | 1 | 246 | 1.89e-101 | 300 |
| Msa1054930 | MtrunA17_Chr6g0459381 | 60.082 | 243 | 90 | 4 | 1 | 239 | 1 | 240 | 2.37e-101 | 300 |
| Msa1054930 | MtrunA17_Chr6g0459421 | 57.831 | 249 | 98 | 5 | 1 | 245 | 1 | 246 | 2.53e-101 | 300 |
| Msa1054930 | MtrunA17_Chr6g0462811 | 43.620 | 337 | 174 | 8 | 44 | 378 | 41 | 363 | 1.83e-94 | 286 |
| Msa1054930 | MtrunA17_Chr3g0120021 | 37.560 | 418 | 173 | 6 | 40 | 378 | 36 | 444 | 7.71e-89 | 275 |
| Msa1054930 | MtrunA17_Chr1g0207891 | 35.171 | 381 | 203 | 6 | 38 | 380 | 25 | 399 | 6.19e-81 | 253 |
| Msa1054930 | MtrunA17_Chr3g0120041 | 54.688 | 192 | 84 | 2 | 45 | 236 | 45 | 233 | 9.05e-72 | 225 |
| Msa1054930 | MtrunA17_Chr3g0119931 | 54.070 | 172 | 76 | 1 | 46 | 217 | 42 | 210 | 2.82e-64 | 205 |
| Msa1054930 | MtrunA17_Chr7g0250091 | 32.432 | 407 | 175 | 9 | 9 | 379 | 10 | 352 | 3.66e-64 | 208 |
| Msa1054930 | MtrunA17_Chr6g0462831 | 37.405 | 262 | 128 | 4 | 150 | 378 | 4 | 262 | 1.53e-53 | 178 |
| Msa1054930 | MtrunA17_Chr5g0394731 | 52.632 | 133 | 58 | 1 | 116 | 248 | 20 | 147 | 5.63e-41 | 141 |
| Msa1054930 | MtrunA17_Chr6g0459391 | 45.399 | 163 | 56 | 2 | 250 | 379 | 11 | 173 | 2.03e-40 | 141 |
| Msa1054930 | MtrunA17_Chr6g0459411 | 57.143 | 105 | 44 | 1 | 276 | 379 | 37 | 141 | 2.44e-36 | 129 |
| Msa1054930 | MtrunA17_Chr6g0459431 | 57.143 | 105 | 44 | 1 | 276 | 379 | 37 | 141 | 2.82e-36 | 129 |
| Msa1054930 | MtrunA17_Chr6g0459371 | 59.091 | 88 | 35 | 1 | 293 | 379 | 1 | 88 | 4.07e-30 | 111 |
| Msa1054930 | MtrunA17_Chr3g0120031 | 46.667 | 105 | 55 | 1 | 275 | 378 | 67 | 171 | 1.40e-28 | 109 |
| Msa1054930 | MtrunA17_Chr3g0119941 | 44.231 | 104 | 58 | 0 | 275 | 378 | 63 | 166 | 4.21e-26 | 102 |
| Msa1054930 | MtrunA17_Chr8g0390731 | 28.293 | 205 | 116 | 6 | 44 | 226 | 294 | 489 | 5.73e-14 | 73.6 |
| Msa1054930 | MtrunA17_Chr6g0484931 | 34.043 | 141 | 84 | 3 | 31 | 171 | 275 | 406 | 5.91e-14 | 73.6 |
| Msa1054930 | MtrunA17_Chr6g0462821 | 51.064 | 47 | 22 | 1 | 102 | 148 | 1 | 46 | 3.25e-11 | 58.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1054930 | AT5G14180.1 | 53.580 | 405 | 149 | 5 | 12 | 379 | 14 | 416 | 3.60e-156 | 446 |
| Msa1054930 | AT5G14180.4 | 55.806 | 310 | 105 | 1 | 102 | 379 | 7 | 316 | 4.39e-127 | 369 |
| Msa1054930 | AT5G14180.2 | 55.375 | 307 | 105 | 1 | 105 | 379 | 1 | 307 | 8.31e-125 | 362 |
| Msa1054930 | AT5G14180.5 | 57.090 | 268 | 108 | 4 | 12 | 274 | 14 | 279 | 6.86e-109 | 322 |
| Msa1054930 | AT5G14180.3 | 57.090 | 268 | 108 | 4 | 12 | 274 | 14 | 279 | 1.57e-108 | 321 |
| Msa1054930 | AT2G15230.1 | 34.066 | 364 | 198 | 5 | 47 | 378 | 32 | 385 | 2.25e-72 | 231 |
| Msa1054930 | AT1G73920.2 | 35.938 | 128 | 73 | 3 | 44 | 171 | 223 | 341 | 1.04e-14 | 76.3 |
| Msa1054930 | AT1G73920.1 | 35.938 | 128 | 73 | 3 | 44 | 171 | 292 | 410 | 1.36e-14 | 75.9 |
| Msa1054930 | AT1G18460.1 | 35.156 | 128 | 74 | 3 | 44 | 171 | 290 | 408 | 1.51e-13 | 72.8 |
Find 95 sgRNAs with CRISPR-Local
Find 342 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATGATCTGCTAGAATTAA+AGG | 0.174183 | 7_2:-27954565 | None:intergenic |
| TGCTCATGCTGATTACATTA+TGG | 0.187385 | 7_2:+27957218 | Msa1054930:CDS |
| AAACAGATCACTACACTATT+TGG | 0.227174 | 7_2:+27956012 | Msa1054930:intron |
| CTTCTATGTTCTTACCCTTT+AGG | 0.233695 | 7_2:-27956051 | None:intergenic |
| GTTGCAGCCAAATCCTTTAT+TGG | 0.270019 | 7_2:+27955792 | Msa1054930:CDS |
| TTTATGTACCTCACCAATAA+AGG | 0.282079 | 7_2:-27955805 | None:intergenic |
| CAGATCATGGCTTTGATGTT+TGG | 0.292443 | 7_2:+27954578 | Msa1054930:CDS |
| GATTATGTGTTTAGCCAAAC+TGG | 0.299006 | 7_2:+27955466 | Msa1054930:CDS |
| TACCTTCTGGAATCCTTTGC+AGG | 0.303254 | 7_2:-27951654 | None:intergenic |
| GCTCATGCTGATTACATTAT+GGG | 0.304433 | 7_2:+27957219 | Msa1054930:CDS |
| AAGTCGTAGCAGTCAATTCT+AGG | 0.304700 | 7_2:-27956204 | None:intergenic |
| ATATGTGTATTTCTTACAAT+AGG | 0.314683 | 7_2:-27950903 | None:intergenic |
| ATGTTATTACCTGAAGTTCT+TGG | 0.316168 | 7_2:-27951177 | None:intergenic |
| GTGTAAATATGCAGGCCTTT+TGG | 0.322829 | 7_2:+27955395 | Msa1054930:intron |
| GCTTCTGCTGTCATTGTTCA+TGG | 0.326523 | 7_2:+27951145 | Msa1054930:CDS |
| GTAAGAAATACACATATAAA+AGG | 0.329004 | 7_2:+27950909 | Msa1054930:five_prime_UTR |
| ATTAAAGGCAAGTCTTGTTC+TGG | 0.333137 | 7_2:-27954550 | None:intergenic |
| GAAAGAAAGTGAAATGAAAA+AGG | 0.340300 | 7_2:-27950880 | None:intergenic |
| GCTTCAAGTCGTGTCTCCTT+TGG | 0.358205 | 7_2:+27951076 | Msa1054930:CDS |
| TACCTCACCAATAAAGGATT+TGG | 0.359496 | 7_2:-27955799 | None:intergenic |
| CAAATTTAATGCTATGTACT+AGG | 0.361127 | 7_2:+27957335 | Msa1054930:three_prime_UTR |
| TCCTTTGGAAGAAATCAAAA+TGG | 0.378214 | 7_2:+27951091 | Msa1054930:CDS |
| AATTAATCTTCTGCCCAGTT+TGG | 0.379068 | 7_2:-27955480 | None:intergenic |
| TTGAAGGTTACAACTAAAGA+TGG | 0.383740 | 7_2:+27951619 | Msa1054930:intron |
| GACTTGATGACTGCATTAAC+TGG | 0.384778 | 7_2:+27956222 | Msa1054930:CDS |
| ATACAAATGCCAAGAACTTC+AGG | 0.389343 | 7_2:+27951168 | Msa1054930:CDS |
| ATGTTGAGAATTTACTTGAT+AGG | 0.389542 | 7_2:+27957145 | Msa1054930:CDS |
| TATGTGTATTTCTTACAATA+GGG | 0.395124 | 7_2:-27950902 | None:intergenic |
| GGTAGAGTTGAAGGTAGAAA+TGG | 0.395667 | 7_2:+27951673 | Msa1054930:CDS |
| CTACCTTCAACTCTACCTTC+TGG | 0.406112 | 7_2:-27951667 | None:intergenic |
| AAATGGTGTTAGCCCTCCTT+TGG | 0.406335 | 7_2:+27951108 | Msa1054930:CDS |
| ATGTGGCTTAGATAAGCAAT+AGG | 0.409857 | 7_2:-27955750 | None:intergenic |
| CTAGCAGAATTTAATCCTAA+AGG | 0.421609 | 7_2:+27956036 | Msa1054930:CDS |
| CCTTTAATTCTAGCAGATCA+TGG | 0.423751 | 7_2:+27954565 | Msa1054930:CDS |
| TAGCAGAATTTAATCCTAAA+GGG | 0.427487 | 7_2:+27956037 | Msa1054930:CDS |
| ACATAAACATACTGGGTTAG+AGG | 0.428314 | 7_2:-27954653 | None:intergenic |
| TAGTGCATTATGTTATAATC+TGG | 0.439008 | 7_2:-27957021 | None:intergenic |
| CCTCCATAGCTAATGAAGAT+AGG | 0.443401 | 7_2:-27957096 | None:intergenic |
| GTTAGCCCTCCTTTGGATGA+AGG | 0.456402 | 7_2:+27951115 | Msa1054930:CDS |
| GACTTGAGAAAGGCATCAAC+AGG | 0.457432 | 7_2:-27956168 | None:intergenic |
| ATTCCAGAAGGTAGAGTTGA+AGG | 0.468226 | 7_2:+27951664 | Msa1054930:CDS |
| CATAAACATACTGGGTTAGA+GGG | 0.468329 | 7_2:-27954652 | None:intergenic |
| AAGGTAGAAATGGTGGGACT+AGG | 0.475923 | 7_2:+27951683 | Msa1054930:CDS |
| GATTATAACATAATGCACTA+TGG | 0.477158 | 7_2:+27957024 | Msa1054930:CDS |
| ATGTTGGATAGGTTATATAT+TGG | 0.480961 | 7_2:-27957060 | None:intergenic |
| CTACCTATCTTCATTAGCTA+TGG | 0.481467 | 7_2:+27957093 | Msa1054930:CDS |
| TAATTACGTTGGCCACTCTC+TGG | 0.482825 | 7_2:+27955498 | Msa1054930:CDS |
| TTGGATAGGTTATATATTGG+TGG | 0.488015 | 7_2:-27957057 | None:intergenic |
| AGGTAGATCATGTGGAATGT+TGG | 0.504399 | 7_2:-27957076 | None:intergenic |
| AGAGTTGAAGGTAGAAATGG+TGG | 0.507614 | 7_2:+27951676 | Msa1054930:CDS |
| ATAAAGCTGCTGATTTCAGC+TGG | 0.510041 | 7_2:-27955722 | None:intergenic |
| AGCCACATGAACACTGCACT+TGG | 0.518331 | 7_2:+27955765 | Msa1054930:CDS |
| TACTTCTCTTATCAACATCA+TGG | 0.520662 | 7_2:-27957176 | None:intergenic |
| TTCATAGAACTTGATAGTCT+AGG | 0.524020 | 7_2:-27957311 | None:intergenic |
| GCTTTAGCTTCCTTCTCTGA+AGG | 0.525067 | 7_2:+27955687 | Msa1054930:CDS |
| TGGATAGGTTATATATTGGT+GGG | 0.529275 | 7_2:-27957056 | None:intergenic |
| GAGACCAACATGGTTTCTCT+AGG | 0.529963 | 7_2:+27950992 | Msa1054930:exon |
| GATATTACAACATGGAGTAT+TGG | 0.531184 | 7_2:+27951717 | Msa1054930:CDS |
| AACTATGCAGTTGTTAGACG+TGG | 0.537740 | 7_2:+27956970 | Msa1054930:intron |
| ACACGACTTGAAGCTTGATA+AGG | 0.543173 | 7_2:-27951067 | None:intergenic |
| TGGTGGGACTAGGAAACAAC+CGG | 0.545655 | 7_2:+27951693 | Msa1054930:CDS |
| GATCATGTGGAATGTTGGAT+AGG | 0.551442 | 7_2:-27957071 | None:intergenic |
| AGCCAAATCCTTTATTGGTG+AGG | 0.551660 | 7_2:+27955797 | Msa1054930:CDS |
| GTCCCAAGACCAATTCCAAA+AGG | 0.554581 | 7_2:-27955410 | None:intergenic |
| CTCATGCTGATTACATTATG+GGG | 0.555559 | 7_2:+27957220 | Msa1054930:CDS |
| TGTGGCTTAGATAAGCAATA+GGG | 0.559261 | 7_2:-27955749 | None:intergenic |
| TGAAGGTTACAACTAAAGAT+GGG | 0.560420 | 7_2:+27951620 | Msa1054930:intron |
| GCTATGTACTAGGTTGTCAC+TGG | 0.565244 | 7_2:+27957345 | Msa1054930:three_prime_UTR |
| CCTATCTTCATTAGCTATGG+AGG | 0.565466 | 7_2:+27957096 | Msa1054930:CDS |
| TAGTCGCCGACATGTCTCAT+TGG | 0.565789 | 7_2:+27954627 | Msa1054930:CDS |
| AAAGGCAAGTCTTGTTCTGG+AGG | 0.567063 | 7_2:-27954547 | None:intergenic |
| GCACATATGCCTTCATCCAA+AGG | 0.576347 | 7_2:-27951124 | None:intergenic |
| CACCAAGTGCAGTGTTCATG+TGG | 0.576864 | 7_2:-27955767 | None:intergenic |
| ATTACAACATGGAGTATTGG+TGG | 0.587960 | 7_2:+27951720 | Msa1054930:CDS |
| ACTATGCAGTTGTTAGACGT+GGG | 0.595087 | 7_2:+27956971 | Msa1054930:intron |
| ACTCCATGTTGTAATATCAC+CGG | 0.596325 | 7_2:-27951712 | None:intergenic |
| AGTCGTAGCAGTCAATTCTA+GGG | 0.599847 | 7_2:-27956203 | None:intergenic |
| ATTATGTGTTTAGCCAAACT+GGG | 0.603199 | 7_2:+27955467 | Msa1054930:CDS |
| AAGGCAAGTCTTGTTCTGGA+GGG | 0.605642 | 7_2:-27954546 | None:intergenic |
| GTTTGGATTGCTAACACTAG+AGG | 0.610136 | 7_2:+27954595 | Msa1054930:CDS |
| GGGTGCAGGATGGCATGACA+TGG | 0.627156 | 7_2:+27954515 | Msa1054930:intron |
| CATATGCCTTCATCCAAAGG+AGG | 0.627342 | 7_2:-27951121 | None:intergenic |
| AGCACATAGAGACTTGAGAA+AGG | 0.629811 | 7_2:-27956178 | None:intergenic |
| AGGGGTCCAATGAGACATGT+CGG | 0.633111 | 7_2:-27954633 | None:intergenic |
| ATATGCCTTCATCCAAAGGA+GGG | 0.644823 | 7_2:-27951120 | None:intergenic |
| ATGAAGATAGGTAGATCATG+TGG | 0.646816 | 7_2:-27957084 | None:intergenic |
| CTATGCAGTTGTTAGACGTG+GGG | 0.648539 | 7_2:+27956972 | Msa1054930:intron |
| AGTAATGGAGTACCAGAGAG+TGG | 0.649875 | 7_2:-27955510 | None:intergenic |
| CAACCGGTGATATTACAACA+TGG | 0.652027 | 7_2:+27951709 | Msa1054930:CDS |
| ATAAACATACTGGGTTAGAG+GGG | 0.656553 | 7_2:-27954651 | None:intergenic |
| AGCCTGCAAAGGATTCCAGA+AGG | 0.663410 | 7_2:+27951652 | Msa1054930:CDS |
| GGGCAGAAGATTAATTACGT+TGG | 0.668941 | 7_2:+27955487 | Msa1054930:CDS |
| GAGTTGAAGGTAGAAATGGT+GGG | 0.680227 | 7_2:+27951677 | Msa1054930:CDS |
| GAAGCCTAGAGAAACCATGT+TGG | 0.694754 | 7_2:-27950996 | None:intergenic |
| AGCTCATAGAGAGACCAACA+TGG | 0.737781 | 7_2:+27950982 | Msa1054930:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATATATAAAATATTAATT+GGG | - | chr7_2:27956119-27956138 | None:intergenic | 0.0% |
| !! | ATAATATATAAAATATTAAT+TGG | - | chr7_2:27956120-27956139 | None:intergenic | 0.0% |
| !! | TATATCTTCATAAAAAATTA+TGG | + | chr7_2:27953687-27953706 | Msa1054930:intron | 10.0% |
| !! | AATAATAATAAAATGATTTG+TGG | - | chr7_2:27954028-27954047 | None:intergenic | 10.0% |
| !!! | CATAATTTTATACATAAAAA+AGG | + | chr7_2:27955955-27955974 | Msa1054930:intron | 10.0% |
| !! | TATAGTATAAATGTTTATAT+TGG | - | chr7_2:27956279-27956298 | None:intergenic | 10.0% |
| !!! | GTAAATAGAAAATATTTTCA+TGG | - | chr7_2:27951253-27951272 | None:intergenic | 15.0% |
| !! | TTTACATTTCTTAAAATTTG+TGG | + | chr7_2:27951268-27951287 | Msa1054930:intron | 15.0% |
| !!! | CATGCATTTTATTATATTTT+TGG | - | chr7_2:27951779-27951798 | None:intergenic | 15.0% |
| !! | TATATAAGTTTATAAAATGG+AGG | + | chr7_2:27951944-27951963 | Msa1054930:intron | 15.0% |
| !!! | TTTGTTGTTATTTAATCAAA+GGG | - | chr7_2:27952771-27952790 | None:intergenic | 15.0% |
| !!! | ATTTGTTGTTATTTAATCAA+AGG | - | chr7_2:27952772-27952791 | None:intergenic | 15.0% |
| !!! | AAAGTTTTTTTTCCAATAAA+TGG | + | chr7_2:27953105-27953124 | Msa1054930:intron | 15.0% |
| !!! | AAGTTTTTTTTCCAATAAAT+GGG | + | chr7_2:27953106-27953125 | Msa1054930:intron | 15.0% |
| !!! | AAAGTTTTTTTTCCAATAAA+TGG | + | chr7_2:27953105-27953124 | Msa1054930:intron | 15.0% |
| !!! | AAGTTTTTTTTCCAATAAAT+GGG | + | chr7_2:27953106-27953125 | Msa1054930:intron | 15.0% |
| !! | TGAATGAAATTCAATAAATA+AGG | + | chr7_2:27953424-27953443 | Msa1054930:intron | 15.0% |
| !! | GAATGAAATTCAATAAATAA+GGG | + | chr7_2:27953425-27953444 | Msa1054930:intron | 15.0% |
| !! | TAATTGTTAATTAGAAGAAA+TGG | - | chr7_2:27953997-27954016 | None:intergenic | 15.0% |
| !! | ATTACTATTACATTAATTAG+AGG | - | chr7_2:27954437-27954456 | None:intergenic | 15.0% |
| !! | TAATGTAATAGTAATAGTAT+AGG | + | chr7_2:27954442-27954461 | Msa1054930:intron | 15.0% |
| !!! | AATATTTTTTTGTTTGTTTG+AGG | + | chr7_2:27954686-27954705 | Msa1054930:intron | 15.0% |
| !!! | TTTGTTTATGCTTATTTTTA+AGG | + | chr7_2:27954795-27954814 | Msa1054930:intron | 15.0% |
| !!! | ACAATAAAGGTTTTTTTTTT+TGG | - | chr7_2:27955255-27955274 | None:intergenic | 15.0% |
| !! | TTAAGGATTTATTACAATAA+AGG | - | chr7_2:27955268-27955287 | None:intergenic | 15.0% |
| !! | AAGATACATTAATTTCATTA+AGG | - | chr7_2:27955285-27955304 | None:intergenic | 15.0% |
| !! | AAAAATTTATGTATTAGAGA+AGG | - | chr7_2:27955329-27955348 | None:intergenic | 15.0% |
| !! | CAAATAGAATAGTAAAAAAA+GGG | - | chr7_2:27955627-27955646 | None:intergenic | 15.0% |
| !! | ACAAATAGAATAGTAAAAAA+AGG | - | chr7_2:27955628-27955647 | None:intergenic | 15.0% |
| !! | AGAACATTATTAATTGTTTA+AGG | + | chr7_2:27956602-27956621 | Msa1054930:intron | 15.0% |
| !! | CTAACATTTAATTAGATATT+TGG | + | chr7_2:27956850-27956869 | Msa1054930:intron | 15.0% |
| !! | TATGTGTATTTCTTACAATA+GGG | - | chr7_2:27950905-27950924 | None:intergenic | 20.0% |
| !! | ATATGTGTATTTCTTACAAT+AGG | - | chr7_2:27950906-27950925 | None:intergenic | 20.0% |
| !! | GTAAGAAATACACATATAAA+AGG | + | chr7_2:27950909-27950928 | Msa1054930:five_prime_UTR | 20.0% |
| !!! | TAATTTTGAATAGTATGAGA+TGG | - | chr7_2:27950959-27950978 | None:intergenic | 20.0% |
| !! | TTTATCTGGATATGAAAAAA+AGG | - | chr7_2:27951837-27951856 | None:intergenic | 20.0% |
| !! | GAAAAAAAAAGACATTTATC+TGG | - | chr7_2:27951851-27951870 | None:intergenic | 20.0% |
| !! | AAAAATGTAACCATAAAACT+TGG | + | chr7_2:27952326-27952345 | Msa1054930:intron | 20.0% |
| !!! | AAAATAATAGCCAAGTTTTA+TGG | - | chr7_2:27952339-27952358 | None:intergenic | 20.0% |
| !!! | CATTTTTCTCTTAGATATTT+TGG | - | chr7_2:27952371-27952390 | None:intergenic | 20.0% |
| !!! | TTTTTGCTTATAATAATGAC+CGG | - | chr7_2:27952802-27952821 | None:intergenic | 20.0% |
| !!! | TAAGCAAAAAACTACATTTT+AGG | - | chr7_2:27952901-27952920 | None:intergenic | 20.0% |
| !!! | TTTTTGGTGAAAAAATTGTT+AGG | - | chr7_2:27952975-27952994 | None:intergenic | 20.0% |
| !!! | CATATTTTTGTGTTACTTTT+CGG | + | chr7_2:27953041-27953060 | Msa1054930:intron | 20.0% |
| !!! | CTTTTTGGAATTTAAATAGA+CGG | + | chr7_2:27954093-27954112 | Msa1054930:intron | 20.0% |
| !! | TTCTTCCAAAAACAAATTTA+AGG | + | chr7_2:27954386-27954405 | Msa1054930:intron | 20.0% |
| !!! | ACATTCCTTAAATTTGTTTT+TGG | - | chr7_2:27954394-27954413 | None:intergenic | 20.0% |
| !! | ACAAAAAACATAAACATACT+GGG | - | chr7_2:27954663-27954682 | None:intergenic | 20.0% |
| !! | AACAAAAAACATAAACATAC+TGG | - | chr7_2:27954664-27954683 | None:intergenic | 20.0% |
| !!! | ATGCTTATTTTTAAGGAAAA+TGG | + | chr7_2:27954802-27954821 | Msa1054930:intron | 20.0% |
| !! | TGAAGACTATTCAAATATTT+AGG | - | chr7_2:27954829-27954848 | None:intergenic | 20.0% |
| !!! | TAATTTTGACTTGTATTTGT+AGG | - | chr7_2:27954898-27954917 | None:intergenic | 20.0% |
| !! | AATTATGTTAAATAAGTAGC+TGG | - | chr7_2:27955022-27955041 | None:intergenic | 20.0% |
| !! | GAAAATGCTAACAATAAAAT+TGG | - | chr7_2:27955126-27955145 | None:intergenic | 20.0% |
| !! | TCCTTAAATTATTTATTGTG+TGG | + | chr7_2:27955144-27955163 | Msa1054930:intron | 20.0% |
| !! | ACCACACAATAAATAATTTA+AGG | - | chr7_2:27955148-27955167 | None:intergenic | 20.0% |
| !! | AATTAAAACTGTTAGAAACA+AGG | + | chr7_2:27955175-27955194 | Msa1054930:intron | 20.0% |
| !! | AGAAAGTCTCAATTAATAAA+TGG | - | chr7_2:27955375-27955394 | None:intergenic | 20.0% |
| !! | TCATGTAAAAAAGTAAGTAA+TGG | - | chr7_2:27955528-27955547 | None:intergenic | 20.0% |
| !!! | TTGAGTTTTTTTTAAATACG+AGG | + | chr7_2:27956519-27956538 | Msa1054930:intron | 20.0% |
| !!! | ACATTTTTTTTTTTGCATGA+TGG | - | chr7_2:27956559-27956578 | None:intergenic | 20.0% |
| !!! | TTGTTGTTTTTTCTTTCAAT+CGG | + | chr7_2:27956744-27956763 | Msa1054930:intron | 20.0% |
| ! | GAAAGAAAGTGAAATGAAAA+AGG | - | chr7_2:27950883-27950902 | None:intergenic | 25.0% |
| ! | TAGAATTTAGTTGGACAAAT+TGG | - | chr7_2:27951433-27951452 | None:intergenic | 25.0% |
| ! | AATTAAATGTTTATCCCTTG+TGG | - | chr7_2:27951517-27951536 | None:intergenic | 25.0% |
| !! | TTGCAATCTTAACTTTTTGA+AGG | + | chr7_2:27951603-27951622 | Msa1054930:intron | 25.0% |
| ! | GAAAAAAGTTACAAAAACAG+TGG | - | chr7_2:27951815-27951834 | None:intergenic | 25.0% |
| ! | TTTATAAAATGGAGGACATA+AGG | + | chr7_2:27951952-27951971 | Msa1054930:intron | 25.0% |
| ! | TTTGTCACCATGTTAAAATA+CGG | - | chr7_2:27952162-27952181 | None:intergenic | 25.0% |
| !!! | TACACCAATTTTTTGAGAAA+GGG | - | chr7_2:27952266-27952285 | None:intergenic | 25.0% |
| !!! | TTACACCAATTTTTTGAGAA+AGG | - | chr7_2:27952267-27952286 | None:intergenic | 25.0% |
| ! | TCTAAGAGAAAAATGACATA+TGG | + | chr7_2:27952376-27952395 | Msa1054930:intron | 25.0% |
| ! | TTCCAGTCAAAATTCTAATA+TGG | + | chr7_2:27952507-27952526 | Msa1054930:intron | 25.0% |
| !!! | ATCCATATTAGAATTTTGAC+TGG | - | chr7_2:27952512-27952531 | None:intergenic | 25.0% |
| ! | AGTCAAAATTCTAATATGGA+TGG | + | chr7_2:27952511-27952530 | Msa1054930:intron | 25.0% |
| ! | CATTCATTTAATGATGTATG+TGG | - | chr7_2:27952876-27952895 | None:intergenic | 25.0% |
| ! | CGAAAAGTAACACAAAAATA+TGG | - | chr7_2:27953043-27953062 | None:intergenic | 25.0% |
| ! | AGAATAAGATTCCCATTTAT+TGG | - | chr7_2:27953120-27953139 | None:intergenic | 25.0% |
| !!! | AGTGATAACCCTTAATTTTT+TGG | + | chr7_2:27953142-27953161 | Msa1054930:intron | 25.0% |
| ! | AGAATAAGATTCCCATTTAT+TGG | - | chr7_2:27953120-27953139 | None:intergenic | 25.0% |
| !!! | AGTGATAACCCTTAATTTTT+TGG | + | chr7_2:27953142-27953161 | Msa1054930:intron | 25.0% |
| ! | TTTCTCCTCCAAAAAATTAA+GGG | - | chr7_2:27953244-27953263 | None:intergenic | 25.0% |
| ! | ATTTCTCCTCCAAAAAATTA+AGG | - | chr7_2:27953245-27953264 | None:intergenic | 25.0% |
| ! | AACTTCAAATAAATCATGCT+AGG | + | chr7_2:27953772-27953791 | Msa1054930:intron | 25.0% |
| ! | ATAAAGAGAATGTCGTTATA+AGG | - | chr7_2:27953854-27953873 | None:intergenic | 25.0% |
| ! | GTTTATATACGATGTGAATT+TGG | + | chr7_2:27953908-27953927 | Msa1054930:intron | 25.0% |
| !!! | GTTTACATTATTGATTTGCT+AGG | - | chr7_2:27953949-27953968 | None:intergenic | 25.0% |
| ! | TAAATTCCAAAAAGGTTTGA+AGG | - | chr7_2:27954087-27954106 | None:intergenic | 25.0% |
| ! | CGTCTATTTAAATTCCAAAA+AGG | - | chr7_2:27954095-27954114 | None:intergenic | 25.0% |
| ! | GTAATAATCAAGACCATAAT+CGG | - | chr7_2:27954298-27954317 | None:intergenic | 25.0% |
| !!! | TTTGTTTTTGGAAGAAACAA+TGG | - | chr7_2:27954382-27954401 | None:intergenic | 25.0% |
| ! | AATGTATGTATGTATGTGTA+TGG | + | chr7_2:27954409-27954428 | Msa1054930:intron | 25.0% |
| ! | ATGTATGTATGTATGTGTAT+GGG | + | chr7_2:27954410-27954429 | Msa1054930:intron | 25.0% |
| ! | AATAGTCTTCAACATAAAAC+TGG | + | chr7_2:27954838-27954857 | Msa1054930:intron | 25.0% |
| ! | TAATTTGACCTAAAAACAAG+AGG | + | chr7_2:27954930-27954949 | Msa1054930:intron | 25.0% |
| !! | CTATTCTATTTGTCTAAAAC+TGG | + | chr7_2:27955635-27955654 | Msa1054930:intron | 25.0% |
| ! | TAGCAGAATTTAATCCTAAA+GGG | + | chr7_2:27956037-27956056 | Msa1054930:CDS | 25.0% |
| ! | GACAATTTCTTATGTTACAT+TGG | - | chr7_2:27956079-27956098 | None:intergenic | 25.0% |
| ! | TTGGTCAAAGTAAAATATGT+GGG | - | chr7_2:27956260-27956279 | None:intergenic | 25.0% |
| ! | ATTGGTCAAAGTAAAATATG+TGG | - | chr7_2:27956261-27956280 | None:intergenic | 25.0% |
| !! | ACAACAATTTTTACCTGAAT+TGG | - | chr7_2:27956332-27956351 | None:intergenic | 25.0% |
| !!! | TCGTGATTATTGTGTTATTT+TGG | + | chr7_2:27956446-27956465 | Msa1054930:intron | 25.0% |
| !!! | AATCGATTGAATTTTGAGAA+GGG | - | chr7_2:27956796-27956815 | None:intergenic | 25.0% |
| !! | TTTATTTGTGTTACTGACTA+AGG | + | chr7_2:27956922-27956941 | Msa1054930:intron | 25.0% |
| ! | TAGTGCATTATGTTATAATC+TGG | - | chr7_2:27957024-27957043 | None:intergenic | 25.0% |
| ! | GATTATAACATAATGCACTA+TGG | + | chr7_2:27957024-27957043 | Msa1054930:CDS | 25.0% |
| ! | ATGTTGGATAGGTTATATAT+TGG | - | chr7_2:27957063-27957082 | None:intergenic | 25.0% |
| ! | ATGTTGAGAATTTACTTGAT+AGG | + | chr7_2:27957145-27957164 | Msa1054930:CDS | 25.0% |
| ! | CAAATTTAATGCTATGTACT+AGG | + | chr7_2:27957335-27957354 | Msa1054930:three_prime_UTR | 25.0% |
| ! | TCCTTTGGAAGAAATCAAAA+TGG | + | chr7_2:27951091-27951110 | Msa1054930:CDS | 30.0% |
| !!! | ACCATTTTGATTTCTTCCAA+AGG | - | chr7_2:27951095-27951114 | None:intergenic | 30.0% |
| ATGTTATTACCTGAAGTTCT+TGG | - | chr7_2:27951180-27951199 | None:intergenic | 30.0% | |
| AAACCACATTCATTAGATTG+AGG | - | chr7_2:27951327-27951346 | None:intergenic | 30.0% | |
| TCAATCTAATGAATGTGGTT+TGG | + | chr7_2:27951326-27951345 | Msa1054930:intron | 30.0% | |
| TTCAACGAGTAGAATTTAGT+TGG | - | chr7_2:27951442-27951461 | None:intergenic | 30.0% | |
| TAAGATTTGACTGGATATGT+CGG | + | chr7_2:27951487-27951506 | Msa1054930:intron | 30.0% | |
| ! | ATTAGCATGTGATTTTGCAA+TGG | + | chr7_2:27951556-27951575 | Msa1054930:intron | 30.0% |
| TTGAAGGTTACAACTAAAGA+TGG | + | chr7_2:27951619-27951638 | Msa1054930:intron | 30.0% | |
| TGAAGGTTACAACTAAAGAT+GGG | + | chr7_2:27951620-27951639 | Msa1054930:intron | 30.0% | |
| GATATTACAACATGGAGTAT+TGG | + | chr7_2:27951717-27951736 | Msa1054930:CDS | 30.0% | |
| CTAATGCTAAAAGATATCAC+AGG | - | chr7_2:27951885-27951904 | None:intergenic | 30.0% | |
| !!! | ACACCAATTTTTTGAGAAAG+GGG | - | chr7_2:27952265-27952284 | None:intergenic | 30.0% |
| ! | GAAAATTGACTCATGAGATT+AGG | - | chr7_2:27952402-27952421 | None:intergenic | 30.0% |
| ! | TTGATGATCTGAAGATTGTT+AGG | + | chr7_2:27952457-27952476 | Msa1054930:intron | 30.0% |
| TCCAGCATTTATCAAATGAT+TGG | + | chr7_2:27952539-27952558 | Msa1054930:intron | 30.0% | |
| CCAGCATTTATCAAATGATT+GGG | + | chr7_2:27952540-27952559 | Msa1054930:intron | 30.0% | |
| TTGGGAGTTAAATAACAACT+TGG | + | chr7_2:27952558-27952577 | Msa1054930:intron | 30.0% | |
| TGGGAGTTAAATAACAACTT+GGG | + | chr7_2:27952559-27952578 | Msa1054930:intron | 30.0% | |
| CATTCATTTAATGATGCACA+TGG | + | chr7_2:27952837-27952856 | Msa1054930:intron | 30.0% | |
| ! | TTTTCGGCAAACATTAATCA+TGG | + | chr7_2:27953057-27953076 | Msa1054930:intron | 30.0% |
| !!! | GATAACCCTTAATTTTTTGG+AGG | + | chr7_2:27953145-27953164 | Msa1054930:intron | 30.0% |
| CTTCTCCTCCAAAAAATTAA+GGG | - | chr7_2:27953153-27953172 | None:intergenic | 30.0% | |
| ACTTCTCCTCCAAAAAATTA+AGG | - | chr7_2:27953154-27953173 | None:intergenic | 30.0% | |
| !!! | GATAACCCTTAATTTTTTGG+AGG | + | chr7_2:27953145-27953164 | Msa1054930:intron | 30.0% |
| GACTATAATTTAGAGACAGA+GGG | - | chr7_2:27953285-27953304 | None:intergenic | 30.0% | |
| AAGTTTGTGCACGATTATTA+AGG | + | chr7_2:27953310-27953329 | Msa1054930:intron | 30.0% | |
| GCACGATTATTAAGGAAAAA+TGG | + | chr7_2:27953318-27953337 | Msa1054930:intron | 30.0% | |
| CCACTAGCTACATTTAATAA+GGG | - | chr7_2:27953393-27953412 | None:intergenic | 30.0% | |
| TCCACTAGCTACATTTAATA+AGG | - | chr7_2:27953394-27953413 | None:intergenic | 30.0% | |
| AATCATGCTAGGAAATTTAG+AGG | + | chr7_2:27953783-27953802 | Msa1054930:intron | 30.0% | |
| TATAAGGTAACTCGTATGTA+CGG | - | chr7_2:27953838-27953857 | None:intergenic | 30.0% | |
| !! | GGATTAGTTTCTACAATTAC+AGG | - | chr7_2:27954066-27954085 | None:intergenic | 30.0% |
| ! | ACTAATCCTTCAAACCTTTT+TGG | + | chr7_2:27954078-27954097 | Msa1054930:intron | 30.0% |
| AGTCTCTTCTAACTTAACTA+AGG | - | chr7_2:27954176-27954195 | None:intergenic | 30.0% | |
| ! | TTATGGTCTTGATTATTACG+TGG | + | chr7_2:27954299-27954318 | Msa1054930:intron | 30.0% |
| TAATCGAGGTCTGTATATTT+GGG | - | chr7_2:27954349-27954368 | None:intergenic | 30.0% | |
| ATAATCGAGGTCTGTATATT+TGG | - | chr7_2:27954350-27954369 | None:intergenic | 30.0% | |
| TATCTGAACATAATACAACG+TGG | + | chr7_2:27954494-27954513 | Msa1054930:intron | 30.0% | |
| ATCTGAACATAATACAACGT+GGG | + | chr7_2:27954495-27954514 | Msa1054930:intron | 30.0% | |
| ATTACCAACTCTTTCTCTTT+AGG | - | chr7_2:27954957-27954976 | None:intergenic | 30.0% | |
| TGTTAGAAACAAGGTTAGAT+TGG | + | chr7_2:27955184-27955203 | Msa1054930:intron | 30.0% | |
| AACACATAATCAAAAACAGC+AGG | - | chr7_2:27955457-27955476 | None:intergenic | 30.0% | |
| ATTATGTGTTTAGCCAAACT+GGG | + | chr7_2:27955467-27955486 | Msa1054930:CDS | 30.0% | |
| ! | TCTATTTGTCTAAAACTGGA+AGG | + | chr7_2:27955639-27955658 | Msa1054930:intron | 30.0% |
| ! | AATCAATTTTCCTTCAGAGA+AGG | - | chr7_2:27955700-27955719 | None:intergenic | 30.0% |
| TTTATGTACCTCACCAATAA+AGG | - | chr7_2:27955808-27955827 | None:intergenic | 30.0% | |
| GCACAAAAACATTGTATTGA+AGG | - | chr7_2:27955933-27955952 | None:intergenic | 30.0% | |
| AAATAGTGTAGTGATCTGTT+TGG | - | chr7_2:27956013-27956032 | None:intergenic | 30.0% | |
| AAACAGATCACTACACTATT+TGG | + | chr7_2:27956012-27956031 | Msa1054930:intron | 30.0% | |
| CTAGCAGAATTTAATCCTAA+AGG | + | chr7_2:27956036-27956055 | Msa1054930:CDS | 30.0% | |
| ! | ACAATTTTTACCTGAATTGG+TGG | - | chr7_2:27956329-27956348 | None:intergenic | 30.0% |
| ! | TTCTTTGTTGATGTTGATTG+AGG | - | chr7_2:27956394-27956413 | None:intergenic | 30.0% |
| ATCAACATCAACAAAGAACA+TGG | + | chr7_2:27956396-27956415 | Msa1054930:intron | 30.0% | |
| CACGAGTTAAATCTTACTTT+GGG | - | chr7_2:27956431-27956450 | None:intergenic | 30.0% | |
| TCACGAGTTAAATCTTACTT+TGG | - | chr7_2:27956432-27956451 | None:intergenic | 30.0% | |
| AAGGATTTATTCTGTGTACT+CGG | - | chr7_2:27956691-27956710 | None:intergenic | 30.0% | |
| !! | CAATCGATTGAATTTTGAGA+AGG | - | chr7_2:27956797-27956816 | None:intergenic | 30.0% |
| CTTCTCAAAATTCAATCGAT+TGG | + | chr7_2:27956795-27956814 | Msa1054930:intron | 30.0% | |
| TCAAAATTCAATCGATTGGA+AGG | + | chr7_2:27956799-27956818 | Msa1054930:intron | 30.0% | |
| AACATCGAAGAATGTATTGA+TGG | + | chr7_2:27956825-27956844 | Msa1054930:intron | 30.0% | |
| TGGATAGGTTATATATTGGT+GGG | - | chr7_2:27957059-27957078 | None:intergenic | 30.0% | |
| TTGGATAGGTTATATATTGG+TGG | - | chr7_2:27957060-27957079 | None:intergenic | 30.0% | |
| TACTTCTCTTATCAACATCA+TGG | - | chr7_2:27957179-27957198 | None:intergenic | 30.0% | |
| ! | TTCATAGAACTTGATAGTCT+AGG | - | chr7_2:27957314-27957333 | None:intergenic | 30.0% |
| ATACAAATGCCAAGAACTTC+AGG | + | chr7_2:27951168-27951187 | Msa1054930:CDS | 35.0% | |
| TCCTACGAATACCTCTAATT+CGG | + | chr7_2:27951209-27951228 | Msa1054930:intron | 35.0% | |
| TCATGGAGTTTACGATTTGA+CGG | - | chr7_2:27951236-27951255 | None:intergenic | 35.0% | |
| TGAGATTTGGCTGAACTAAT+TGG | - | chr7_2:27951380-27951399 | None:intergenic | 35.0% | |
| CCAAATCTCACTCATTAAGT+GGG | + | chr7_2:27951390-27951409 | Msa1054930:intron | 35.0% | |
| TTCAACGACTAAGATTTGAC+TGG | + | chr7_2:27951478-27951497 | Msa1054930:intron | 35.0% | |
| ACTCCATGTTGTAATATCAC+CGG | - | chr7_2:27951715-27951734 | None:intergenic | 35.0% | |
| !! | ATTACAACATGGAGTATTGG+TGG | + | chr7_2:27951720-27951739 | Msa1054930:CDS | 35.0% |
| GATATCACAGGAAAAAGAGA+AGG | - | chr7_2:27951873-27951892 | None:intergenic | 35.0% | |
| ATGCACTATCATTACTTGTG+AGG | + | chr7_2:27952093-27952112 | Msa1054930:intron | 35.0% | |
| AAATACGGAGTTTGGTTAAG+TGG | - | chr7_2:27952147-27952166 | None:intergenic | 35.0% | |
| CCATGTTAAAATACGGAGTT+TGG | - | chr7_2:27952155-27952174 | None:intergenic | 35.0% | |
| !!! | CCAAACTCCGTATTTTAACA+TGG | + | chr7_2:27952152-27952171 | Msa1054930:intron | 35.0% |
| TAACATGGTGACAAAAAGTG+CGG | + | chr7_2:27952167-27952186 | Msa1054930:intron | 35.0% | |
| CCCAATCATTTGATAAATGC+TGG | - | chr7_2:27952543-27952562 | None:intergenic | 35.0% | |
| AACAACTTGGGCTAATCATT+TGG | + | chr7_2:27952571-27952590 | Msa1054930:intron | 35.0% | |
| TTGGGCTAATCATTTGGTTA+AGG | + | chr7_2:27952577-27952596 | Msa1054930:intron | 35.0% | |
| ATAACAACAAATACACCCTC+CGG | + | chr7_2:27952780-27952799 | Msa1054930:intron | 35.0% | |
| TGCTTATAATAATGACCGGA+GGG | - | chr7_2:27952798-27952817 | None:intergenic | 35.0% | |
| TTGCTTATAATAATGACCGG+AGG | - | chr7_2:27952799-27952818 | None:intergenic | 35.0% | |
| TTGCTTATATTAGTGACCAG+AGG | + | chr7_2:27952914-27952933 | Msa1054930:intron | 35.0% | |
| TGCTTATATTAGTGACCAGA+GGG | + | chr7_2:27952915-27952934 | Msa1054930:intron | 35.0% | |
| !!! | GCGTGATAGTACTGTTTTTT+TGG | - | chr7_2:27952991-27953010 | None:intergenic | 35.0% |
| CGACTATAATTTAGAGACAG+AGG | - | chr7_2:27953286-27953305 | None:intergenic | 35.0% | |
| CCCTTATTAAATGTAGCTAG+TGG | + | chr7_2:27953390-27953409 | Msa1054930:intron | 35.0% | |
| TTGCTAGGTTTAAGTGTTAG+TGG | - | chr7_2:27953934-27953953 | None:intergenic | 35.0% | |
| ! | GGTGATTTCAAGTACAAGTT+GGG | - | chr7_2:27954277-27954296 | None:intergenic | 35.0% |
| ! | GTACTTGAAATCACCGATTA+TGG | + | chr7_2:27954282-27954301 | Msa1054930:intron | 35.0% |
| !! | TTTTGGAAGAAACAATGGCA+GGG | - | chr7_2:27954377-27954396 | None:intergenic | 35.0% |
| !! | TTTTTGGAAGAAACAATGGC+AGG | - | chr7_2:27954378-27954397 | None:intergenic | 35.0% |
| !! | ATTAAAGGCAAGTCTTGTTC+TGG | - | chr7_2:27954553-27954572 | None:intergenic | 35.0% |
| CCATGATCTGCTAGAATTAA+AGG | - | chr7_2:27954568-27954587 | None:intergenic | 35.0% | |
| CCTTTAATTCTAGCAGATCA+TGG | + | chr7_2:27954565-27954584 | Msa1054930:CDS | 35.0% | |
| ! | ATAAACATACTGGGTTAGAG+GGG | - | chr7_2:27954654-27954673 | None:intergenic | 35.0% |
| ! | CATAAACATACTGGGTTAGA+GGG | - | chr7_2:27954655-27954674 | None:intergenic | 35.0% |
| ! | ACATAAACATACTGGGTTAG+AGG | - | chr7_2:27954656-27954675 | None:intergenic | 35.0% |
| AGTCTTCAACATAAAACTGG+AGG | + | chr7_2:27954841-27954860 | Msa1054930:intron | 35.0% | |
| !!! | CTTTAGGACCTCTTGTTTTT+AGG | - | chr7_2:27954941-27954960 | None:intergenic | 35.0% |
| GACTTTCTGTGTAAATATGC+AGG | + | chr7_2:27955387-27955406 | Msa1054930:intron | 35.0% | |
| AAAAACAGCAGGTAGATCAT+AGG | - | chr7_2:27955446-27955465 | None:intergenic | 35.0% | |
| GATTATGTGTTTAGCCAAAC+TGG | + | chr7_2:27955466-27955485 | Msa1054930:CDS | 35.0% | |
| AATTAATCTTCTGCCCAGTT+TGG | - | chr7_2:27955483-27955502 | None:intergenic | 35.0% | |
| TGTGGCTTAGATAAGCAATA+GGG | - | chr7_2:27955752-27955771 | None:intergenic | 35.0% | |
| ATGTGGCTTAGATAAGCAAT+AGG | - | chr7_2:27955753-27955772 | None:intergenic | 35.0% | |
| TACCTCACCAATAAAGGATT+TGG | - | chr7_2:27955802-27955821 | None:intergenic | 35.0% | |
| CTTCTATGTTCTTACCCTTT+AGG | - | chr7_2:27956054-27956073 | None:intergenic | 35.0% | |
| !! | GAATTTTGAGAAGGGAGTTA+GGG | - | chr7_2:27956788-27956807 | None:intergenic | 35.0% |
| !! | TGAATTTTGAGAAGGGAGTT+AGG | - | chr7_2:27956789-27956808 | None:intergenic | 35.0% |
| ATGAAGATAGGTAGATCATG+TGG | - | chr7_2:27957087-27957106 | None:intergenic | 35.0% | |
| CTACCTATCTTCATTAGCTA+TGG | + | chr7_2:27957093-27957112 | Msa1054930:CDS | 35.0% | |
| ! | TGCTCATGCTGATTACATTA+TGG | + | chr7_2:27957218-27957237 | Msa1054930:CDS | 35.0% |
| ! | GCTCATGCTGATTACATTAT+GGG | + | chr7_2:27957219-27957238 | Msa1054930:CDS | 35.0% |
| ! | CTCATGCTGATTACATTATG+GGG | + | chr7_2:27957220-27957239 | Msa1054930:CDS | 35.0% |
| ACACGACTTGAAGCTTGATA+AGG | - | chr7_2:27951070-27951089 | None:intergenic | 40.0% | |
| ATATGCCTTCATCCAAAGGA+GGG | - | chr7_2:27951123-27951142 | None:intergenic | 40.0% | |
| CATGGAGTTTACGATTTGAC+GGG | - | chr7_2:27951235-27951254 | None:intergenic | 40.0% | |
| CGACCTCAATCTAATGAATG+TGG | + | chr7_2:27951321-27951340 | Msa1054930:intron | 40.0% | |
| TGAACTAATTGGATACGCAG+AGG | - | chr7_2:27951369-27951388 | None:intergenic | 40.0% | |
| GCCAAATCTCACTCATTAAG+TGG | + | chr7_2:27951389-27951408 | Msa1054930:intron | 40.0% | |
| CCCACTTAATGAGTGAGATT+TGG | - | chr7_2:27951393-27951412 | None:intergenic | 40.0% | |
| ATTCCAGAAGGTAGAGTTGA+AGG | + | chr7_2:27951664-27951683 | Msa1054930:CDS | 40.0% | |
| GGTAGAGTTGAAGGTAGAAA+TGG | + | chr7_2:27951673-27951692 | Msa1054930:CDS | 40.0% | |
| AGAGTTGAAGGTAGAAATGG+TGG | + | chr7_2:27951676-27951695 | Msa1054930:CDS | 40.0% | |
| GAGTTGAAGGTAGAAATGGT+GGG | + | chr7_2:27951677-27951696 | Msa1054930:CDS | 40.0% | |
| CAACCGGTGATATTACAACA+TGG | + | chr7_2:27951709-27951728 | Msa1054930:CDS | 40.0% | |
| !! | ATGGAGTATTGGTGGTAAGT+TGG | + | chr7_2:27951728-27951747 | Msa1054930:intron | 40.0% |
| CGTCCCCTTTCTCAAAAAAT+TGG | + | chr7_2:27952259-27952278 | Msa1054930:intron | 40.0% | |
| !! | AGGAAATTTAGAGGAGTGTC+AGG | + | chr7_2:27953792-27953811 | Msa1054930:intron | 40.0% |
| CAGGAGCAACAACATGTTAA+TGG | + | chr7_2:27953811-27953830 | Msa1054930:intron | 40.0% | |
| ! | CGGTGATTTCAAGTACAAGT+TGG | - | chr7_2:27954278-27954297 | None:intergenic | 40.0% |
| GATTATTACGTGGTCAAGCA+TGG | + | chr7_2:27954309-27954328 | Msa1054930:intron | 40.0% | |
| !! | CAGATCATGGCTTTGATGTT+TGG | + | chr7_2:27954578-27954597 | Msa1054930:CDS | 40.0% |
| GTTTGGATTGCTAACACTAG+AGG | + | chr7_2:27954595-27954614 | Msa1054930:CDS | 40.0% | |
| AGGTCCTAAAGAGAAAGAGT+TGG | + | chr7_2:27954950-27954969 | Msa1054930:intron | 40.0% | |
| ! | GTGTAAATATGCAGGCCTTT+TGG | + | chr7_2:27955395-27955414 | Msa1054930:intron | 40.0% |
| !!! | ATATGCAGGCCTTTTGGAAT+TGG | + | chr7_2:27955401-27955420 | Msa1054930:intron | 40.0% |
| GGGCAGAAGATTAATTACGT+TGG | + | chr7_2:27955487-27955506 | Msa1054930:CDS | 40.0% | |
| TAAAACTGGAAGGCTGTGTT+TGG | + | chr7_2:27955649-27955668 | Msa1054930:intron | 40.0% | |
| !! | ATAAAGCTGCTGATTTCAGC+TGG | - | chr7_2:27955725-27955744 | None:intergenic | 40.0% |
| GTTGCAGCCAAATCCTTTAT+TGG | + | chr7_2:27955792-27955811 | Msa1054930:CDS | 40.0% | |
| AGCCAAATCCTTTATTGGTG+AGG | + | chr7_2:27955797-27955816 | Msa1054930:CDS | 40.0% | |
| TCATCACACCAAGTGAAACA+CGG | + | chr7_2:27955861-27955880 | Msa1054930:intron | 40.0% | |
| AACAATGTCCGTGTTTCACT+TGG | - | chr7_2:27955872-27955891 | None:intergenic | 40.0% | |
| ! | AACACGGACATTGTTTCTCT+CGG | + | chr7_2:27955877-27955896 | Msa1054930:intron | 40.0% |
| TTTGAGTGTCCGACACATAT+TGG | - | chr7_2:27955906-27955925 | None:intergenic | 40.0% | |
| AGCACATAGAGACTTGAGAA+AGG | - | chr7_2:27956181-27956200 | None:intergenic | 40.0% | |
| AGTCGTAGCAGTCAATTCTA+GGG | - | chr7_2:27956206-27956225 | None:intergenic | 40.0% | |
| AAGTCGTAGCAGTCAATTCT+AGG | - | chr7_2:27956207-27956226 | None:intergenic | 40.0% | |
| ! | GACTTGATGACTGCATTAAC+TGG | + | chr7_2:27956222-27956241 | Msa1054930:CDS | 40.0% |
| TTCGTAAATGCCACCAATTC+AGG | + | chr7_2:27956316-27956335 | Msa1054930:intron | 40.0% | |
| AACAAAGAACATGGTGCACT+TGG | + | chr7_2:27956405-27956424 | Msa1054930:intron | 40.0% | |
| AACTATGCAGTTGTTAGACG+TGG | + | chr7_2:27956970-27956989 | Msa1054930:intron | 40.0% | |
| ACTATGCAGTTGTTAGACGT+GGG | + | chr7_2:27956971-27956990 | Msa1054930:intron | 40.0% | |
| GATCATGTGGAATGTTGGAT+AGG | - | chr7_2:27957074-27957093 | None:intergenic | 40.0% | |
| AGGTAGATCATGTGGAATGT+TGG | - | chr7_2:27957079-27957098 | None:intergenic | 40.0% | |
| CCTCCATAGCTAATGAAGAT+AGG | - | chr7_2:27957099-27957118 | None:intergenic | 40.0% | |
| CCTATCTTCATTAGCTATGG+AGG | + | chr7_2:27957096-27957115 | Msa1054930:CDS | 40.0% | |
| AGCTCATAGAGAGACCAACA+TGG | + | chr7_2:27950982-27951001 | Msa1054930:exon | 45.0% | |
| GAGACCAACATGGTTTCTCT+AGG | + | chr7_2:27950992-27951011 | Msa1054930:exon | 45.0% | |
| GAAGCCTAGAGAAACCATGT+TGG | - | chr7_2:27950999-27951018 | None:intergenic | 45.0% | |
| ! | AAATGGTGTTAGCCCTCCTT+TGG | + | chr7_2:27951108-27951127 | Msa1054930:CDS | 45.0% |
| CATATGCCTTCATCCAAAGG+AGG | - | chr7_2:27951124-27951143 | None:intergenic | 45.0% | |
| GCACATATGCCTTCATCCAA+AGG | - | chr7_2:27951127-27951146 | None:intergenic | 45.0% | |
| GCTTCTGCTGTCATTGTTCA+TGG | + | chr7_2:27951145-27951164 | Msa1054930:CDS | 45.0% | |
| !! | GCCGAATTAGAGGTATTCGT+AGG | - | chr7_2:27951213-27951232 | None:intergenic | 45.0% |
| ! | TGAATGTGGTTTGGCTGAAC+AGG | + | chr7_2:27951335-27951354 | Msa1054930:intron | 45.0% |
| GATATGTCGGACAACCACAA+GGG | + | chr7_2:27951500-27951519 | Msa1054930:intron | 45.0% | |
| ! | GGTACATTTTGAGCCTGCAA+AGG | + | chr7_2:27951641-27951660 | Msa1054930:CDS | 45.0% |
| !! | TACCTTCTGGAATCCTTTGC+AGG | - | chr7_2:27951657-27951676 | None:intergenic | 45.0% |
| CTACCTTCAACTCTACCTTC+TGG | - | chr7_2:27951670-27951689 | None:intergenic | 45.0% | |
| ! | AAGGTAGAAATGGTGGGACT+AGG | + | chr7_2:27951683-27951702 | Msa1054930:CDS | 45.0% |
| ATTCCGCGTCTGTTACATTG+TGG | + | chr7_2:27952191-27952210 | Msa1054930:intron | 45.0% | |
| TTGACCCTTAACAAGTGTCC+CGG | - | chr7_2:27952624-27952643 | None:intergenic | 45.0% | |
| TGACTTCCTTAACCAGTGTC+CGG | + | chr7_2:27952728-27952747 | Msa1054930:intron | 45.0% | |
| ! | ATTTTCTCGACTACACCCTC+TGG | - | chr7_2:27952933-27952952 | None:intergenic | 45.0% |
| ! | GACAGAGGGAGTATGAGAAA+AGG | - | chr7_2:27953271-27953290 | None:intergenic | 45.0% |
| ACGCTGCTGCATGTTGAATT+CGG | + | chr7_2:27954138-27954157 | Msa1054930:intron | 45.0% | |
| GCATGTTGAATTCGGACTCA+AGG | + | chr7_2:27954146-27954165 | Msa1054930:intron | 45.0% | |
| ACATAATACAACGTGGGTGC+AGG | + | chr7_2:27954501-27954520 | Msa1054930:intron | 45.0% | |
| !! | AAGGCAAGTCTTGTTCTGGA+GGG | - | chr7_2:27954549-27954568 | None:intergenic | 45.0% |
| !! | AAAGGCAAGTCTTGTTCTGG+AGG | - | chr7_2:27954550-27954569 | None:intergenic | 45.0% |
| !!! | AGGCCTTTTGGAATTGGTCT+TGG | + | chr7_2:27955407-27955426 | Msa1054930:intron | 45.0% |
| !!! | GGCCTTTTGGAATTGGTCTT+GGG | + | chr7_2:27955408-27955427 | Msa1054930:intron | 45.0% |
| GTCCCAAGACCAATTCCAAA+AGG | - | chr7_2:27955413-27955432 | None:intergenic | 45.0% | |
| TAATTACGTTGGCCACTCTC+TGG | + | chr7_2:27955498-27955517 | Msa1054930:CDS | 45.0% | |
| ! | AGTAATGGAGTACCAGAGAG+TGG | - | chr7_2:27955513-27955532 | None:intergenic | 45.0% |
| ! | GCTTTAGCTTCCTTCTCTGA+AGG | + | chr7_2:27955687-27955706 | Msa1054930:CDS | 45.0% |
| TCTCGGACACCAATATGTGT+CGG | + | chr7_2:27955894-27955913 | Msa1054930:intron | 45.0% | |
| !! | GACTTGAGAAAGGCATCAAC+AGG | - | chr7_2:27956171-27956190 | None:intergenic | 45.0% |
| CTATGCAGTTGTTAGACGTG+GGG | + | chr7_2:27956972-27956991 | Msa1054930:intron | 45.0% | |
| GCTATGTACTAGGTTGTCAC+TGG | + | chr7_2:27957345-27957364 | Msa1054930:three_prime_UTR | 45.0% | |
| !! | AAATATATAAGTTTATAAAA+TGG | + | chr7_2:27951941-27951960 | Msa1054930:intron | 5.0% |
| !! | AATATATAAAATATTAATTG+GGG | - | chr7_2:27956118-27956137 | None:intergenic | 5.0% |
| !! | ATTATAATTGAAATATTTAA+AGG | - | chr7_2:27956710-27956729 | None:intergenic | 5.0% |
| !! | TTAAATATTTCAATTATAAT+TGG | + | chr7_2:27956710-27956729 | Msa1054930:intron | 5.0% |
| GCTTCAAGTCGTGTCTCCTT+TGG | + | chr7_2:27951076-27951095 | Msa1054930:CDS | 50.0% | |
| GTTAGCCCTCCTTTGGATGA+AGG | + | chr7_2:27951115-27951134 | Msa1054930:CDS | 50.0% | |
| ! | GATTTGACGGGCCGAATTAG+AGG | - | chr7_2:27951223-27951242 | None:intergenic | 50.0% |
| ! | TGTGGTTTGGCTGAACAGGT+TGG | + | chr7_2:27951339-27951358 | Msa1054930:intron | 50.0% |
| GACAAATTGGACGACTGCAG+TGG | - | chr7_2:27951420-27951439 | None:intergenic | 50.0% | |
| GGATATGTCGGACAACCACA+AGG | + | chr7_2:27951499-27951518 | Msa1054930:intron | 50.0% | |
| AGCCTGCAAAGGATTCCAGA+AGG | + | chr7_2:27951652-27951671 | Msa1054930:CDS | 50.0% | |
| TGGTGGGACTAGGAAACAAC+CGG | + | chr7_2:27951693-27951712 | Msa1054930:CDS | 50.0% | |
| ACGCCACAATGTAACAGACG+CGG | - | chr7_2:27952197-27952216 | None:intergenic | 50.0% | |
| AATGTTAACCAGTGCCCACC+CGG | + | chr7_2:27952602-27952621 | Msa1054930:intron | 50.0% | |
| TGACCCTTAACAAGTGTCCC+GGG | - | chr7_2:27952623-27952642 | None:intergenic | 50.0% | |
| GACTTCCTTAACCAGTGTCC+GGG | + | chr7_2:27952729-27952748 | Msa1054930:intron | 50.0% | |
| !! | GGTCTTGTTAACCAGTGTCC+CGG | - | chr7_2:27952750-27952769 | None:intergenic | 50.0% |
| AATACAACGTGGGTGCAGGA+TGG | + | chr7_2:27954505-27954524 | Msa1054930:intron | 50.0% | |
| TAGTCGCCGACATGTCTCAT+TGG | + | chr7_2:27954627-27954646 | Msa1054930:CDS | 50.0% | |
| AGGGGTCCAATGAGACATGT+CGG | - | chr7_2:27954636-27954655 | None:intergenic | 50.0% | |
| AGCCACATGAACACTGCACT+TGG | + | chr7_2:27955765-27955784 | Msa1054930:CDS | 50.0% | |
| CACCAAGTGCAGTGTTCATG+TGG | - | chr7_2:27955770-27955789 | None:intergenic | 50.0% | |
| AGAAGGGAGTTAGGGCACAT+TGG | - | chr7_2:27956780-27956799 | None:intergenic | 50.0% | |
| ATGTTAACCAGTGCCCACCC+GGG | + | chr7_2:27952603-27952622 | Msa1054930:intron | 55.0% | |
| CCTTAACAAGTGTCCCGGGT+GGG | - | chr7_2:27952619-27952638 | None:intergenic | 55.0% | |
| ! | CCACCCGGGACACTTGTTAA+GGG | + | chr7_2:27952617-27952636 | Msa1054930:intron | 55.0% |
| ! | AGTGTCCCGGACACTGGTTA+AGG | - | chr7_2:27952737-27952756 | None:intergenic | 55.0% |
| TTAACCAGTGTCCGGGACAC+TGG | + | chr7_2:27952736-27952755 | Msa1054930:intron | 55.0% | |
| TTAACCAGTGTCCCGGACAC+TGG | - | chr7_2:27952743-27952762 | None:intergenic | 55.0% | |
| ATGGCAGGGCTGCATAATCG+AGG | - | chr7_2:27954363-27954382 | None:intergenic | 55.0% | |
| ACTGGAAGGCTGTGTTTGGC+AGG | + | chr7_2:27955653-27955672 | Msa1054930:intron | 55.0% | |
| CTGGAAGGCTGTGTTTGGCA+GGG | + | chr7_2:27955654-27955673 | Msa1054930:intron | 55.0% | |
| GGGAGTTAGGGCACATTGGT+CGG | - | chr7_2:27956776-27956795 | None:intergenic | 55.0% | |
| ! | CCCACCCGGGACACTTGTTA+AGG | + | chr7_2:27952616-27952635 | Msa1054930:intron | 60.0% |
| CCCTTAACAAGTGTCCCGGG+TGG | - | chr7_2:27952620-27952639 | None:intergenic | 60.0% | |
| GGGTGCAGGATGGCATGACA+TGG | + | chr7_2:27954515-27954534 | Msa1054930:intron | 60.0% | |
| CAAGTGTCCCGGGTGGGCAC+TGG | - | chr7_2:27952613-27952632 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 27950869 | 27957420 | 27950869 | ID=Msa1054930;Name=Msa1054930 |
| chr7_2 | mRNA | 27950869 | 27957420 | 27950869 | ID=Msa1054930-mRNA-1;Parent=Msa1054930;Name=Msa1054930-mRNA-1;_AED=0.13;_eAED=0.13;_QI=132|0.85|1|1|1|1|8|115|382 |
| chr7_2 | exon | 27950869 | 27951189 | 27950869 | ID=Msa1054930-mRNA-1:exon:5811;Parent=Msa1054930-mRNA-1 |
| chr7_2 | exon | 27951625 | 27951741 | 27951625 | ID=Msa1054930-mRNA-1:exon:5812;Parent=Msa1054930-mRNA-1 |
| chr7_2 | exon | 27954523 | 27954663 | 27954523 | ID=Msa1054930-mRNA-1:exon:5813;Parent=Msa1054930-mRNA-1 |
| chr7_2 | exon | 27955409 | 27955519 | 27955409 | ID=Msa1054930-mRNA-1:exon:5814;Parent=Msa1054930-mRNA-1 |
| chr7_2 | exon | 27955675 | 27955818 | 27955675 | ID=Msa1054930-mRNA-1:exon:5815;Parent=Msa1054930-mRNA-1 |
| chr7_2 | exon | 27956018 | 27956058 | 27956018 | ID=Msa1054930-mRNA-1:exon:5816;Parent=Msa1054930-mRNA-1 |
| chr7_2 | exon | 27956164 | 27956243 | 27956164 | ID=Msa1054930-mRNA-1:exon:5817;Parent=Msa1054930-mRNA-1 |
| chr7_2 | exon | 27956980 | 27957420 | 27956980 | ID=Msa1054930-mRNA-1:exon:5818;Parent=Msa1054930-mRNA-1 |
| chr7_2 | five_prime_UTR | 27950869 | 27951000 | 27950869 | ID=Msa1054930-mRNA-1:five_prime_utr;Parent=Msa1054930-mRNA-1 |
| chr7_2 | CDS | 27951001 | 27951189 | 27951001 | ID=Msa1054930-mRNA-1:cds;Parent=Msa1054930-mRNA-1 |
| chr7_2 | CDS | 27951625 | 27951741 | 27951625 | ID=Msa1054930-mRNA-1:cds;Parent=Msa1054930-mRNA-1 |
| chr7_2 | CDS | 27954523 | 27954663 | 27954523 | ID=Msa1054930-mRNA-1:cds;Parent=Msa1054930-mRNA-1 |
| chr7_2 | CDS | 27955409 | 27955519 | 27955409 | ID=Msa1054930-mRNA-1:cds;Parent=Msa1054930-mRNA-1 |
| chr7_2 | CDS | 27955675 | 27955818 | 27955675 | ID=Msa1054930-mRNA-1:cds;Parent=Msa1054930-mRNA-1 |
| chr7_2 | CDS | 27956018 | 27956058 | 27956018 | ID=Msa1054930-mRNA-1:cds;Parent=Msa1054930-mRNA-1 |
| chr7_2 | CDS | 27956164 | 27956243 | 27956164 | ID=Msa1054930-mRNA-1:cds;Parent=Msa1054930-mRNA-1 |
| chr7_2 | CDS | 27956980 | 27957305 | 27956980 | ID=Msa1054930-mRNA-1:cds;Parent=Msa1054930-mRNA-1 |
| chr7_2 | three_prime_UTR | 27957306 | 27957420 | 27957306 | ID=Msa1054930-mRNA-1:three_prime_utr;Parent=Msa1054930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
