Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1013920 | XP_003622205.1 | 95.383 | 758 | 22 | 1 | 1 | 758 | 1 | 745 | 0.0 | 1472 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1013920 | sp|P16157|ANK1_HUMAN | 25.358 | 698 | 411 | 25 | 15 | 649 | 9 | 659 | 3.48e-33 | 141 |
| Msa1013920 | sp|P16157|ANK1_HUMAN | 24.958 | 593 | 350 | 15 | 81 | 633 | 240 | 777 | 1.46e-21 | 104 |
| Msa1013920 | sp|P16157|ANK1_HUMAN | 23.951 | 572 | 361 | 20 | 79 | 637 | 205 | 715 | 1.53e-16 | 88.2 |
| Msa1013920 | sp|P16157|ANK1_HUMAN | 24.607 | 382 | 252 | 13 | 311 | 682 | 39 | 394 | 2.33e-15 | 84.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1013920 | G7L3C3 | 95.383 | 758 | 22 | 1 | 1 | 758 | 1 | 745 | 0.0 | 1472 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1013920 | Msa1055180 | 0.842710 | 2.190391e-58 | -8.615850e-47 |
| Msa1013920 | Msa1093580 | 0.920082 | 2.005252e-87 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1013920 | MtrunA17_Chr7g0226271 | 95.383 | 758 | 22 | 1 | 1 | 758 | 1 | 745 | 0.0 | 1472 |
| Msa1013920 | MtrunA17_Chr3g0122751 | 57.312 | 759 | 301 | 7 | 7 | 756 | 13 | 757 | 0.0 | 845 |
| Msa1013920 | MtrunA17_Chr6g0461061 | 24.430 | 307 | 165 | 7 | 379 | 627 | 170 | 467 | 1.10e-12 | 71.2 |
| Msa1013920 | MtrunA17_Chr3g0082141 | 26.807 | 332 | 212 | 10 | 316 | 625 | 513 | 835 | 1.14e-12 | 72.0 |
| Msa1013920 | MtrunA17_Chr4g0073161 | 27.953 | 254 | 137 | 8 | 449 | 659 | 40 | 290 | 1.22e-12 | 71.2 |
| Msa1013920 | MtrunA17_Chr1g0164551 | 26.586 | 331 | 213 | 10 | 316 | 625 | 76 | 397 | 3.33e-12 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1013920 | AT5G14230.1 | 61.133 | 759 | 273 | 5 | 1 | 756 | 1 | 740 | 0.0 | 905 |
| Msa1013920 | AT5G14230.2 | 59.933 | 599 | 218 | 5 | 161 | 756 | 1 | 580 | 0.0 | 696 |
| Msa1013920 | AT5G13530.2 | 26.061 | 330 | 216 | 9 | 316 | 625 | 511 | 832 | 7.61e-14 | 76.3 |
| Msa1013920 | AT5G13530.1 | 25.680 | 331 | 217 | 9 | 316 | 625 | 511 | 833 | 1.91e-13 | 75.1 |
Find 196 sgRNAs with CRISPR-Local
Find 447 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCAATGCCTAATTGATTT+TGG | 0.159363 | 7_1:-21394275 | Msa1013920:CDS |
| TCGAGTTTGTGTTGAGTTTC+AGG | 0.163089 | 7_1:-21398668 | Msa1013920:CDS |
| ACAAGGGCTGGTGCTGATTT+TGG | 0.171693 | 7_1:-21394164 | Msa1013920:CDS |
| CAAAGCCTCTGAAGAGCTTT+TGG | 0.229513 | 7_1:+21395832 | None:intergenic |
| AGTAGAAGTATTGCTGGATT+TGG | 0.255545 | 7_1:+21394034 | None:intergenic |
| CTGTGCTGCGAGGCAGTGTT+AGG | 0.267092 | 7_1:-21393297 | Msa1013920:CDS |
| TTGAAAACTGTCATTGAATC+TGG | 0.269575 | 7_1:-21393966 | Msa1013920:CDS |
| TGTTGTCAGTTTGCTCCTTC+AGG | 0.273672 | 7_1:-21395097 | Msa1013920:intron |
| CTCTTGTGGCTGCATGCTGC+AGG | 0.273850 | 7_1:-21395632 | Msa1013920:CDS |
| CGAATTTCTTTGCAAGTAGA+AGG | 0.278442 | 7_1:+21393502 | None:intergenic |
| TTCTTCAGGTGTGCTTTGTT+GGG | 0.306841 | 7_1:-21393343 | Msa1013920:CDS |
| ACTTCGGTTTCGTAGTTTAC+TGG | 0.311637 | 7_1:+21398841 | None:intergenic |
| TTACGTATGTTGCGTTCTTC+AGG | 0.312789 | 7_1:-21393357 | Msa1013920:CDS |
| GCTCAACATTGCGTAGAAAT+AGG | 0.324872 | 7_1:-21393269 | Msa1013920:CDS |
| GTTCTTCAGGTGTGCTTTGT+TGG | 0.326228 | 7_1:-21393344 | Msa1013920:CDS |
| CTGGAAATGCTGAGCTTGTT+AGG | 0.333522 | 7_1:-21398603 | Msa1013920:CDS |
| CAGAAGAACCTGGAATGTTC+AGG | 0.345561 | 7_1:-21393230 | Msa1013920:CDS |
| AATCACAACCAAAATCAATT+AGG | 0.356750 | 7_1:+21394267 | None:intergenic |
| GAGTGCGGCGGTGGTGGTGA+AGG | 0.356795 | 7_1:+21398901 | None:intergenic |
| GTAGAAGTATTGCTGGATTT+GGG | 0.356951 | 7_1:+21394035 | None:intergenic |
| ACTTCGTGTGGGTGCTGGAC+TGG | 0.365888 | 7_1:-21394558 | Msa1013920:CDS |
| ATTCACATCAAAACCTTTGC+TGG | 0.367833 | 7_1:+21393650 | None:intergenic |
| GGTCAGAAGCTGCCAAGCTT+TGG | 0.375852 | 7_1:-21393161 | Msa1013920:CDS |
| TGAGCTTGTTAGGAAGTTAC+TGG | 0.376528 | 7_1:-21398593 | Msa1013920:intron |
| GGATGCCCCTGCATTAATTA+AGG | 0.378185 | 7_1:+21395764 | None:intergenic |
| GTGGCAATGTCGAGGCTGTT+AGG | 0.384969 | 7_1:-21394403 | Msa1013920:CDS |
| GGGTGCTTACTAACAAGAAT+AGG | 0.385566 | 7_1:-21393209 | Msa1013920:CDS |
| TGCAGCTCGTCGTGGTGATT+TGG | 0.389340 | 7_1:-21393691 | Msa1013920:CDS |
| GAACTGTAATTTATTTGAAA+AGG | 0.390139 | 7_1:-21393778 | Msa1013920:CDS |
| GTCAGAAGCTGCCAAGCTTT+GGG | 0.393241 | 7_1:-21393160 | Msa1013920:CDS |
| GTAAGCACCCTGAACATTCC+AGG | 0.399156 | 7_1:+21393222 | None:intergenic |
| CTACACCATGCTATCCTTTG+TGG | 0.401877 | 7_1:-21394422 | Msa1013920:CDS |
| CACCGCCTAGTACCAGTTTA+CGG | 0.403132 | 7_1:+21393433 | None:intergenic |
| AGATGAACTTGCCCGTAAAC+TGG | 0.403528 | 7_1:-21393445 | Msa1013920:CDS |
| GAAAGGGGTAATCAAAATAC+TGG | 0.416275 | 7_1:-21393735 | Msa1013920:CDS |
| AGCTTCTTCACAAGCTGGCT+GGG | 0.416665 | 7_1:+21395743 | None:intergenic |
| AGCTTGTGAAGAAGCTCTTC+TGG | 0.417060 | 7_1:-21395736 | Msa1013920:CDS |
| AGGAAGGAACTCGGTCTTGC+TGG | 0.420463 | 7_1:+21394334 | None:intergenic |
| GCTTGAATTTACACTTGAAA+GGG | 0.421021 | 7_1:-21393751 | Msa1013920:CDS |
| CTTGAGACCTTAATTAATGC+AGG | 0.427693 | 7_1:-21395771 | Msa1013920:CDS |
| CTTCGTGTGGGTGCTGGACT+GGG | 0.429796 | 7_1:-21394557 | Msa1013920:CDS |
| GTAAAGTTATGCAATAAATC+TGG | 0.432261 | 7_1:-21393834 | Msa1013920:CDS |
| TACCATGGGCAAGCAGGGTG+TGG | 0.435095 | 7_1:-21395705 | Msa1013920:CDS |
| GGAGTGTAGTCCTCCCCATC+TGG | 0.437604 | 7_1:+21393624 | None:intergenic |
| TTTGTTGGGGCCAGTCTAGC+AGG | 0.438563 | 7_1:-21393329 | Msa1013920:CDS |
| TTTCGATTGCTTGTATATGC+TGG | 0.439274 | 7_1:-21393864 | Msa1013920:CDS |
| GAGCTTCTTCACAAGCTGGC+TGG | 0.439752 | 7_1:+21395742 | None:intergenic |
| GTTTACTGGGAAAATCTGTT+TGG | 0.447674 | 7_1:+21398855 | None:intergenic |
| CTTGACTATCAAGATGATAG+TGG | 0.456936 | 7_1:-21393933 | Msa1013920:CDS |
| AGGGAGTGGTGGTTAGAGAT+AGG | 0.457371 | 7_1:+21398921 | None:intergenic |
| GCAAGTTACCATGGGCAAGC+AGG | 0.458287 | 7_1:-21395711 | Msa1013920:CDS |
| CTTCGGTTTCGTAGTTTACT+GGG | 0.458349 | 7_1:+21398842 | None:intergenic |
| TCTTGTGGCTGCATGCTGCA+GGG | 0.459877 | 7_1:-21395631 | Msa1013920:CDS |
| ATTAGGCATTGAGATATTGC+AGG | 0.461712 | 7_1:+21394284 | None:intergenic |
| GTGGTGGATGTAATTAGAAA+TGG | 0.462784 | 7_1:-21394065 | Msa1013920:CDS |
| TAGTTGCAGCTGTAGTTCAT+AGG | 0.467183 | 7_1:-21395128 | Msa1013920:CDS |
| GTGGAGAATACTGTCATTGT+TGG | 0.468123 | 7_1:+21398877 | None:intergenic |
| GCACGTTTCTCCTGCTAGAC+TGG | 0.468551 | 7_1:+21393319 | None:intergenic |
| TTTCTACGCAATGTTGAGCT+TGG | 0.472003 | 7_1:+21393273 | None:intergenic |
| GTTGGTGAGTGCGGCGGTGG+TGG | 0.472906 | 7_1:+21398895 | None:intergenic |
| AGTGCGGCGGTGGTGGTGAA+GGG | 0.474019 | 7_1:+21398902 | None:intergenic |
| AACTATTTGAGACATGTTGC+AGG | 0.474097 | 7_1:+21394465 | None:intergenic |
| TTCTTGAAATGACAGAGTGT+TGG | 0.475631 | 7_1:-21395867 | Msa1013920:intron |
| GAAGAACTTCGTGTGGGTGC+TGG | 0.484007 | 7_1:-21394563 | Msa1013920:CDS |
| GCACACCAGGTGATGCCATA+TGG | 0.484590 | 7_1:+21394530 | None:intergenic |
| TCTGTTGATGTCAACTTCGC+CGG | 0.484593 | 7_1:-21398748 | Msa1013920:CDS |
| CGGAGTGGGAGGCTTGTAGA+AGG | 0.485146 | 7_1:+21398809 | None:intergenic |
| TGCTTGAATTTACACTTGAA+AGG | 0.487179 | 7_1:-21393752 | Msa1013920:CDS |
| TGAAATTAAAAGCTTACAAA+GGG | 0.488174 | 7_1:+21393569 | None:intergenic |
| GGTGCTTACTAACAAGAATA+GGG | 0.491837 | 7_1:-21393208 | Msa1013920:CDS |
| TGGTCATGGGATAATGCAAC+TGG | 0.491893 | 7_1:-21394587 | Msa1013920:CDS |
| GTACACATGGCGTCTCGTCT+AGG | 0.493808 | 7_1:-21394311 | Msa1013920:CDS |
| TACTGGGAAAATCTGTTTGG+TGG | 0.494305 | 7_1:+21398858 | None:intergenic |
| TTGTGGCTGCATGCTGCAGG+GGG | 0.494761 | 7_1:-21395629 | Msa1013920:CDS |
| GGCGGTGGTGGTGAAGGGAG+TGG | 0.496566 | 7_1:+21398907 | None:intergenic |
| TCCACATTTGTGTGGAGAGA+AGG | 0.496788 | 7_1:+21395162 | None:intergenic |
| ACCGCCTAGTACCAGTTTAC+GGG | 0.498041 | 7_1:+21393434 | None:intergenic |
| ACCATGGGCAAGCAGGGTGT+GGG | 0.499453 | 7_1:-21395704 | Msa1013920:CDS |
| AGACGAGACGCCATGTGTAC+AGG | 0.499544 | 7_1:+21394314 | None:intergenic |
| AATACCCCTCACCCAAAGCT+TGG | 0.505531 | 7_1:+21393149 | None:intergenic |
| GGGTGTGGGGAATTGCTCAT+GGG | 0.506960 | 7_1:-21395690 | Msa1013920:CDS |
| TACGTAATTGTTTCACATGT+GGG | 0.507409 | 7_1:+21393373 | None:intergenic |
| TTTGGCTTGGTGAACAGTGC+AGG | 0.509382 | 7_1:-21394146 | Msa1013920:CDS |
| ATTGTTGGTGAGTGCGGCGG+TGG | 0.511745 | 7_1:+21398892 | None:intergenic |
| AGCTGCCAAGCTTTGGGTGA+GGG | 0.511825 | 7_1:-21393154 | Msa1013920:CDS |
| TGGATGCAAGTGCGACAGAC+CGG | 0.512269 | 7_1:-21395206 | Msa1013920:CDS |
| CTTGCCCGTAAACTGGTACT+AGG | 0.513587 | 7_1:-21393438 | Msa1013920:CDS |
| CTTGTGGCTGCATGCTGCAG+GGG | 0.513819 | 7_1:-21395630 | Msa1013920:CDS |
| TAAGGCTTGGAGCATGGTCA+TGG | 0.514093 | 7_1:-21394601 | Msa1013920:CDS |
| TTGAACTCTCGAACAGACTC+TGG | 0.514187 | 7_1:-21394245 | Msa1013920:CDS |
| AGGGTGTGGGGAATTGCTCA+TGG | 0.515456 | 7_1:-21395691 | Msa1013920:CDS |
| GCTGGACTGGGAGAACCATA+TGG | 0.517961 | 7_1:-21394545 | Msa1013920:CDS |
| CTTAGAATGTGGTGCTAATG+TGG | 0.519561 | 7_1:-21394375 | Msa1013920:CDS |
| TGCAGCTGTAGTTCATAGGC+AGG | 0.519700 | 7_1:-21395124 | Msa1013920:CDS |
| GAGTCGTACAAGTGGTCCTA+TGG | 0.520238 | 7_1:-21394101 | Msa1013920:CDS |
| CTCAAAGTACTAACAAGGGC+TGG | 0.525330 | 7_1:-21394176 | Msa1013920:CDS |
| TCTTCAGGTGTGCTTTGTTG+GGG | 0.526572 | 7_1:-21393342 | Msa1013920:CDS |
| TGTGGTTGAGACACTCATAA+AGG | 0.527208 | 7_1:-21395598 | Msa1013920:CDS |
| TAGAAGGCGTTGTGAGACTT+CGG | 0.532369 | 7_1:+21398825 | None:intergenic |
| TCCACTCATGTTAGCAGCAA+GGG | 0.533090 | 7_1:-21393604 | Msa1013920:CDS |
| TCCCTTGCTGCTAACATGAG+TGG | 0.534250 | 7_1:+21393603 | None:intergenic |
| TTCTGGAGGCAAGTTACCAT+GGG | 0.540626 | 7_1:-21395719 | Msa1013920:CDS |
| TGCAACTACTGCAGCAGTGA+GGG | 0.541071 | 7_1:-21395811 | Msa1013920:CDS |
| GGATGCAAGTGCGACAGACC+GGG | 0.543220 | 7_1:-21395205 | Msa1013920:CDS |
| AGAAGAGCTTCTTCACAAGC+TGG | 0.543401 | 7_1:+21395738 | None:intergenic |
| ACAGGTGATGCAGAAGAACC+TGG | 0.544223 | 7_1:-21393240 | Msa1013920:CDS |
| GTTCAGAAGCACACAAAATG+TGG | 0.545439 | 7_1:-21393405 | Msa1013920:CDS |
| AGAAGAACCTGGAATGTTCA+GGG | 0.545678 | 7_1:-21393229 | Msa1013920:CDS |
| AAGCTGCCAAGCTTTGGGTG+AGG | 0.551443 | 7_1:-21393155 | Msa1013920:CDS |
| CGACGAGCTGCACAGTGTAA+AGG | 0.551627 | 7_1:+21393702 | None:intergenic |
| AAAATACTCAACTGCACACC+AGG | 0.552182 | 7_1:+21394517 | None:intergenic |
| TGTGCTGCGAGGCAGTGTTA+GGG | 0.555069 | 7_1:-21393296 | Msa1013920:CDS |
| GTGCATTTCGTATGTGAGGG+AGG | 0.555488 | 7_1:-21393183 | Msa1013920:CDS |
| GCCTTCTCTCCACACAAATG+TGG | 0.555992 | 7_1:-21395163 | Msa1013920:CDS |
| CTTCTGGAGGCAAGTTACCA+TGG | 0.556076 | 7_1:-21395720 | Msa1013920:CDS |
| TTGAGACCTTAATTAATGCA+GGG | 0.556601 | 7_1:-21395770 | Msa1013920:CDS |
| ATACGTAATTGTTTCACATG+TGG | 0.557480 | 7_1:+21393372 | None:intergenic |
| TTGAAGTAAGGCTTGGAGCA+TGG | 0.558223 | 7_1:-21394607 | Msa1013920:CDS |
| CCATGGGCAAGCAGGGTGTG+GGG | 0.560261 | 7_1:-21395703 | Msa1013920:CDS |
| GCTGCCAAGCTTTGGGTGAG+GGG | 0.563446 | 7_1:-21393153 | Msa1013920:CDS |
| GTTACATTGCTGACCAGCAA+AGG | 0.569092 | 7_1:-21393663 | Msa1013920:CDS |
| ACTCTTCAAACTAACAGCTC+CGG | 0.573075 | 7_1:+21398729 | None:intergenic |
| CAAGTTACCATGGGCAAGCA+GGG | 0.574424 | 7_1:-21395710 | Msa1013920:CDS |
| ATGAAATTAAAAGCTTACAA+AGG | 0.575942 | 7_1:+21393568 | None:intergenic |
| GGACAGATCGCCGGAGTGGG+AGG | 0.577562 | 7_1:+21398798 | None:intergenic |
| GTTGACATCAACAGAAGGAT+CGG | 0.578074 | 7_1:+21398756 | None:intergenic |
| CCCCACACCCTGCTTGCCCA+TGG | 0.578239 | 7_1:+21395703 | None:intergenic |
| CAGCCTCGACATTGCCACAA+AGG | 0.578878 | 7_1:+21394408 | None:intergenic |
| TTGCAAAGAAATTCGCAGAA+GGG | 0.578951 | 7_1:-21393494 | Msa1013920:CDS |
| GGAGATGCAGTGAAAGGCTA+AGG | 0.579580 | 7_1:+21398777 | None:intergenic |
| TTGATGTGAATGTTCCAGAT+GGG | 0.580176 | 7_1:-21393638 | Msa1013920:CDS |
| CTTGAATTTACACTTGAAAG+GGG | 0.580515 | 7_1:-21393750 | Msa1013920:CDS |
| CGATTCTCGCGTTTCCTCCG+TGG | 0.581973 | 7_1:-21398954 | Msa1013920:five_prime_UTR |
| TTCAGAAGCACACAAAATGT+GGG | 0.586232 | 7_1:-21393404 | Msa1013920:CDS |
| AACTACTGCAGCAGTGAGGG+AGG | 0.586911 | 7_1:-21395808 | Msa1013920:CDS |
| TTTATTGCATAACTTTACAT+CGG | 0.586946 | 7_1:+21393839 | None:intergenic |
| AAGGCTTGGAGCATGGTCAT+GGG | 0.588256 | 7_1:-21394600 | Msa1013920:CDS |
| CGAGTTCCTTCCTGTACACA+TGG | 0.588613 | 7_1:-21394324 | Msa1013920:CDS |
| GTCTCAAATAGTTGTCATTG+TGG | 0.592574 | 7_1:-21394455 | Msa1013920:CDS |
| ACTGTCATTGTTGGTGAGTG+CGG | 0.596472 | 7_1:+21398886 | None:intergenic |
| GAAGCACACAAAATGTGGGA+AGG | 0.598612 | 7_1:-21393400 | Msa1013920:CDS |
| AAAGCTTACAAAGGGATGCA+TGG | 0.599357 | 7_1:+21393577 | None:intergenic |
| GGAGGTGCATTTCGTATGTG+AGG | 0.600606 | 7_1:-21393187 | Msa1013920:CDS |
| TTGTGCAAAATATAAACAAG+AGG | 0.605272 | 7_1:-21394204 | Msa1013920:CDS |
| CTTGCAAAGAAATTCGCAGA+AGG | 0.611082 | 7_1:-21393495 | Msa1013920:CDS |
| TGAGACCTTAATTAATGCAG+GGG | 0.611370 | 7_1:-21395769 | Msa1013920:CDS |
| GAATTTCTTTGCAAGTAGAA+GGG | 0.611776 | 7_1:+21393503 | None:intergenic |
| CATTACAATCCACATTTGTG+TGG | 0.611859 | 7_1:+21395154 | None:intergenic |
| CATGTGTACAGGAAGGAACT+CGG | 0.612747 | 7_1:+21394325 | None:intergenic |
| AAGCACACAAAATGTGGGAA+GGG | 0.613050 | 7_1:-21393399 | Msa1013920:CDS |
| AGGATCGGAGATGCAGTGAA+AGG | 0.613374 | 7_1:+21398771 | None:intergenic |
| CATTGCCACAAAGGATAGCA+TGG | 0.613821 | 7_1:+21394417 | None:intergenic |
| AAAGGCTAAGGACAGATCGC+CGG | 0.614312 | 7_1:+21398789 | None:intergenic |
| TGCATTTCGTATGTGAGGGA+GGG | 0.615935 | 7_1:-21393182 | Msa1013920:CDS |
| GGTGGTGGTGAAGGGAGTGG+TGG | 0.615978 | 7_1:+21398910 | None:intergenic |
| GAGAACCATATGGCATCACC+TGG | 0.618277 | 7_1:-21394535 | Msa1013920:CDS |
| ACTACTGCAGCAGTGAGGGA+GGG | 0.618729 | 7_1:-21395807 | Msa1013920:CDS |
| CTCCACTCATGTTAGCAGCA+AGG | 0.618965 | 7_1:-21393605 | Msa1013920:CDS |
| TGATGTGAATGTTCCAGATG+GGG | 0.620066 | 7_1:-21393637 | Msa1013920:CDS |
| AGGTCTCAAGAATATCAAGA+TGG | 0.621096 | 7_1:+21395784 | None:intergenic |
| AGTGTCTCAAAGTACTAACA+AGG | 0.623722 | 7_1:-21394181 | Msa1013920:CDS |
| TTTGATGTGAATGTTCCAGA+TGG | 0.625886 | 7_1:-21393639 | Msa1013920:CDS |
| GTAAACCAAAAGCTCTTCAG+AGG | 0.628315 | 7_1:-21395837 | Msa1013920:CDS |
| TATTGCTGTACACGCTCTTG+TGG | 0.628876 | 7_1:-21395646 | Msa1013920:CDS |
| GAGAAACGTGCTGTGCTGCG+AGG | 0.633297 | 7_1:-21393307 | Msa1013920:CDS |
| GAAGGAGCAAACTGACAACA+TGG | 0.634842 | 7_1:+21395100 | None:intergenic |
| GAGGTGCATTTCGTATGTGA+GGG | 0.635007 | 7_1:-21393186 | Msa1013920:CDS |
| TAAGTGACTGTAAAAGCACC+CGG | 0.636325 | 7_1:+21395187 | None:intergenic |
| TTACACTGTGCAGCTCGTCG+TGG | 0.639564 | 7_1:-21393699 | Msa1013920:CDS |
| GCTATGCATACAGCTATGAA+AGG | 0.641849 | 7_1:-21393900 | Msa1013920:CDS |
| AGGGGTAATCAAAATACTGG+TGG | 0.642235 | 7_1:-21393732 | Msa1013920:CDS |
| GTTAGGATACTCTTAGAATG+TGG | 0.643303 | 7_1:-21394386 | Msa1013920:CDS |
| CTCATGTTAGCAGCAAGGGA+AGG | 0.644540 | 7_1:-21393600 | Msa1013920:CDS |
| GCGAAGTTGACATCAACAGA+AGG | 0.645408 | 7_1:+21398751 | None:intergenic |
| CTTCTACAAGCCTCCCACTC+CGG | 0.650889 | 7_1:-21398808 | Msa1013920:CDS |
| CAATTGCCGAGTCGTACAAG+TGG | 0.652112 | 7_1:-21394109 | Msa1013920:CDS |
| CACTGCTTGTTGAAAACCAT+AGG | 0.653989 | 7_1:+21394085 | None:intergenic |
| TATCCTTTGTGGCAATGTCG+AGG | 0.654180 | 7_1:-21394411 | Msa1013920:CDS |
| GGTATTAAACTTGTAACGAG+AGG | 0.654806 | 7_1:-21393132 | Msa1013920:CDS |
| ACTACAGAATGGTGCTACGA+CGG | 0.661827 | 7_1:-21394633 | Msa1013920:intron |
| GTCATTGTTGGTGAGTGCGG+CGG | 0.663572 | 7_1:+21398889 | None:intergenic |
| ATAGGACCACTTGTACGACT+CGG | 0.667303 | 7_1:+21394103 | None:intergenic |
| CGTAGAAATAGGCACAACAC+AGG | 0.667404 | 7_1:-21393258 | Msa1013920:CDS |
| AACTGGCGAAGAACTTCGTG+TGG | 0.670473 | 7_1:-21394570 | Msa1013920:CDS |
| AGATAGGTGAGCATGCGCCA+CGG | 0.671055 | 7_1:+21398937 | None:intergenic |
| TTGTGAAGAAGCTCTTCTGG+AGG | 0.676266 | 7_1:-21395733 | Msa1013920:CDS |
| CTAAGGACAGATCGCCGGAG+TGG | 0.676625 | 7_1:+21398794 | None:intergenic |
| TTGCAACTACTGCAGCAGTG+AGG | 0.677688 | 7_1:-21395812 | Msa1013920:CDS |
| GAGACGCCATGTGTACAGGA+AGG | 0.685160 | 7_1:+21394318 | None:intergenic |
| TGTGAATGTTCCAGATGGGG+AGG | 0.702989 | 7_1:-21393634 | Msa1013920:CDS |
| GTGTCTCAAAGTACTAACAA+GGG | 0.718421 | 7_1:-21394180 | Msa1013920:CDS |
| GCTTACTAACAAGAATAGGG+AGG | 0.721137 | 7_1:-21393205 | Msa1013920:CDS |
| AGATGATAGTGGTTTCTCAG+CGG | 0.723493 | 7_1:-21393922 | Msa1013920:CDS |
| AGAGCGTGTACAGCAATATG+CGG | 0.731066 | 7_1:+21395651 | None:intergenic |
| ACTGGCGAAGAACTTCGTGT+GGG | 0.731967 | 7_1:-21394569 | Msa1013920:CDS |
| GCCCGTAAACTGGTACTAGG+CGG | 0.752401 | 7_1:-21393435 | Msa1013920:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATTTTGAATTTGATATT+TGG | - | chr7_1:21395263-21395282 | Msa1013920:intron | 10.0% |
| !!! | TTATTTTGAATTTGATATTT+GGG | - | chr7_1:21395264-21395283 | Msa1013920:intron | 10.0% |
| !!! | TGTCTTTTTTATTTATTTAT+TGG | - | chr7_1:21395351-21395370 | Msa1013920:intron | 10.0% |
| !!! | GTCTTTTTTATTTATTTATT+GGG | - | chr7_1:21395352-21395371 | Msa1013920:intron | 10.0% |
| !!! | TTTTTTATTTTATATAAGTG+GGG | + | chr7_1:21395859-21395878 | None:intergenic | 10.0% |
| !! | AATAAATAAAAAATCTTGTT+AGG | - | chr7_1:21396155-21396174 | Msa1013920:intron | 10.0% |
| !! | ATAAATAAAAAATCTTGTTA+GGG | - | chr7_1:21396156-21396175 | Msa1013920:intron | 10.0% |
| !! | ATATGTGATTACATTTAATT+AGG | - | chr7_1:21393904-21393923 | Msa1013920:CDS | 15.0% |
| !!! | TTTTAAGGAAAATTTCAAAA+TGG | - | chr7_1:21394090-21394109 | Msa1013920:CDS | 15.0% |
| !! | GATCATTATTATTGTAAAAT+TGG | + | chr7_1:21394784-21394803 | None:intergenic | 15.0% |
| !! | ACAATAATAATGATCAATAT+AGG | - | chr7_1:21394789-21394808 | Msa1013920:intron | 15.0% |
| !! | CGTGAAATATTAATAAATAA+GGG | + | chr7_1:21395561-21395580 | None:intergenic | 15.0% |
| !! | ACGTGAAATATTAATAAATA+AGG | + | chr7_1:21395562-21395581 | None:intergenic | 15.0% |
| !! | ATTTATTAATATTTCACGTA+TGG | - | chr7_1:21395563-21395582 | Msa1013920:CDS | 15.0% |
| !! | TTTATTAATATTTCACGTAT+GGG | - | chr7_1:21395564-21395583 | Msa1013920:CDS | 15.0% |
| !!! | AACCAAAAAAATTGTTATTT+TGG | + | chr7_1:21395708-21395727 | None:intergenic | 15.0% |
| !! | AGTTTCATAATATTATTAGA+GGG | + | chr7_1:21396690-21396709 | None:intergenic | 15.0% |
| !! | TAGTTTCATAATATTATTAG+AGG | + | chr7_1:21396691-21396710 | None:intergenic | 15.0% |
| !!! | AATTTGAGATATTTTTTCAA+TGG | - | chr7_1:21396842-21396861 | Msa1013920:intron | 15.0% |
| !!! | TTCAATTTCAACTGTTTTAT+TGG | - | chr7_1:21393551-21393570 | Msa1013920:CDS | 20.0% |
| !!! | TGAATGAATATTTTCTGAAA+TGG | - | chr7_1:21393809-21393828 | Msa1013920:CDS | 20.0% |
| !!! | ACTTTTACTTTATGTTGATT+TGG | - | chr7_1:21394219-21394238 | Msa1013920:CDS | 20.0% |
| !!! | GAATTTTTTAGCCATAAAAA+AGG | + | chr7_1:21394264-21394283 | None:intergenic | 20.0% |
| !! | AGAAAAATGTATTGTCAAAA+GGG | + | chr7_1:21394316-21394335 | None:intergenic | 20.0% |
| !! | TAGAAAAATGTATTGTCAAA+AGG | + | chr7_1:21394317-21394336 | None:intergenic | 20.0% |
| !! | AAAATGAATTGCAAAGAAAA+TGG | - | chr7_1:21394386-21394405 | Msa1013920:CDS | 20.0% |
| !! | ATAATATCAAATTGAATCCA+TGG | + | chr7_1:21394704-21394723 | None:intergenic | 20.0% |
| !! | TTGATATTATTACATAACAG+TGG | - | chr7_1:21394714-21394733 | Msa1013920:intron | 20.0% |
| !!! | TTATTGTAAAATTGGTTCAA+TGG | + | chr7_1:21394776-21394795 | None:intergenic | 20.0% |
| !!! | GTCCAAAATAACAATTTTTT+TGG | - | chr7_1:21395703-21395722 | Msa1013920:CDS | 20.0% |
| !! | CATTATATGTTTATGTTCAA+TGG | + | chr7_1:21395792-21395811 | None:intergenic | 20.0% |
| !! | AATAAAGCTGAGATATAATA+AGG | + | chr7_1:21395948-21395967 | None:intergenic | 20.0% |
| !!! | AGCTTTTACAAAAATTACAA+TGG | - | chr7_1:21396013-21396032 | Msa1013920:intron | 20.0% |
| !! | TTTCAATACTTCAAACAAAT+TGG | - | chr7_1:21396124-21396143 | Msa1013920:intron | 20.0% |
| !!! | TGATTATAGAGATTTTGTAA+TGG | - | chr7_1:21396528-21396547 | Msa1013920:intron | 20.0% |
| !!! | ATTGTTTTTTCCCTATTATT+TGG | - | chr7_1:21396588-21396607 | Msa1013920:intron | 20.0% |
| !! | GTTTCATAATATTATTAGAG+GGG | + | chr7_1:21396689-21396708 | None:intergenic | 20.0% |
| !! | TAAAACTACAAATAATAAGC+TGG | + | chr7_1:21396784-21396803 | None:intergenic | 20.0% |
| !!! | TTATTTGTAGTTTTAGCTTA+CGG | - | chr7_1:21396789-21396808 | Msa1013920:intron | 20.0% |
| !! | TTTATTGCATAACTTTACAT+CGG | + | chr7_1:21398245-21398264 | None:intergenic | 20.0% |
| !! | GAACTGTAATTTATTTGAAA+AGG | - | chr7_1:21398303-21398322 | Msa1013920:intron | 20.0% |
| !! | TGAAATTAAAAGCTTACAAA+GGG | + | chr7_1:21398515-21398534 | None:intergenic | 20.0% |
| !! | ATGAAATTAAAAGCTTACAA+AGG | + | chr7_1:21398516-21398535 | None:intergenic | 20.0% |
| !!! | TGTAAGCTTTTAATTTCATA+CGG | - | chr7_1:21398517-21398536 | Msa1013920:intron | 20.0% |
| !!! | CTAGTTGTTTTGAAAAATGA+TGG | - | chr7_1:21393619-21393638 | Msa1013920:CDS | 25.0% |
| ! | ACATCTAATCGAAAATGTTT+CGG | - | chr7_1:21393870-21393889 | Msa1013920:CDS | 25.0% |
| !! | ACTGAGTGAATAGTTTTTAA+AGG | - | chr7_1:21394003-21394022 | Msa1013920:CDS | 25.0% |
| !! | CTGAGTGAATAGTTTTTAAA+GGG | - | chr7_1:21394004-21394023 | Msa1013920:CDS | 25.0% |
| !!! | TGAGTGAATAGTTTTTAAAG+GGG | - | chr7_1:21394005-21394024 | Msa1013920:CDS | 25.0% |
| ! | GAATTTCATCTTCAAAGTAA+CGG | - | chr7_1:21394133-21394152 | Msa1013920:CDS | 25.0% |
| ! | AATTTCATCTTCAAAGTAAC+GGG | - | chr7_1:21394134-21394153 | Msa1013920:CDS | 25.0% |
| !!! | TCACTTTTTCTCCTTTTTTA+TGG | - | chr7_1:21394250-21394269 | Msa1013920:CDS | 25.0% |
| ! | GAAAAATGTATTGTCAAAAG+GGG | + | chr7_1:21394315-21394334 | None:intergenic | 25.0% |
| ! | AAATAATACACTCAACAATC+AGG | + | chr7_1:21394468-21394487 | None:intergenic | 25.0% |
| !! | GATTGTTGAGTGTATTATTT+TGG | - | chr7_1:21394468-21394487 | Msa1013920:CDS | 25.0% |
| !!! | TGTATTATTTTGGTTGCATT+AGG | - | chr7_1:21394478-21394497 | Msa1013920:CDS | 25.0% |
| !!! | AATGGTTGTACTTTTAAAAG+GGG | + | chr7_1:21394758-21394777 | None:intergenic | 25.0% |
| !!! | CAATGGTTGTACTTTTAAAA+GGG | + | chr7_1:21394759-21394778 | None:intergenic | 25.0% |
| !! | TCAATGGTTGTACTTTTAAA+AGG | + | chr7_1:21394760-21394779 | None:intergenic | 25.0% |
| ! | TGTTCCAATATTTACTTGAA+AGG | - | chr7_1:21394861-21394880 | Msa1013920:intron | 25.0% |
| !! | TGTTCCTTTCAAGTAAATAT+TGG | + | chr7_1:21394868-21394887 | None:intergenic | 25.0% |
| !! | ATTTAGAAGATCTTGTTTGT+TGG | - | chr7_1:21394925-21394944 | Msa1013920:intron | 25.0% |
| ! | AAAAAAAGAGCAATTTGTGA+AGG | + | chr7_1:21395039-21395058 | None:intergenic | 25.0% |
| !! | TTTTGAATTTGATATTTGGG+AGG | - | chr7_1:21395267-21395286 | Msa1013920:intron | 25.0% |
| !! | GTTTGCTACTAAAAACAAAA+AGG | + | chr7_1:21395732-21395751 | None:intergenic | 25.0% |
| ! | ATATGTTTATGTTCAATGGT+CGG | + | chr7_1:21395788-21395807 | None:intergenic | 25.0% |
| !!! | TCAGCTTTATTTTTGTATCA+CGG | - | chr7_1:21395957-21395976 | Msa1013920:intron | 25.0% |
| ! | TAAATGCATATTTGGTATCA+CGG | + | chr7_1:21396063-21396082 | None:intergenic | 25.0% |
| ! | TATCAGACTAAATGCATATT+TGG | + | chr7_1:21396071-21396090 | None:intergenic | 25.0% |
| !!! | TGTTTGAAGTATTGAAAAGT+AGG | + | chr7_1:21396121-21396140 | None:intergenic | 25.0% |
| !! | TTTTAACGTGCCAAATAATA+GGG | + | chr7_1:21396601-21396620 | None:intergenic | 25.0% |
| !! | TTTTTAACGTGCCAAATAAT+AGG | + | chr7_1:21396602-21396621 | None:intergenic | 25.0% |
| ! | TGAAAGCTAAATAATACTCA+AGG | + | chr7_1:21396720-21396739 | None:intergenic | 25.0% |
| !! | CATGTTTATTTAGAATCCTA+TGG | + | chr7_1:21396747-21396766 | None:intergenic | 25.0% |
| !! | ATATATTGGCTATAACAACT+AGG | + | chr7_1:21397091-21397110 | None:intergenic | 25.0% |
| ! | TTAAACACTAACAATGAAGT+AGG | + | chr7_1:21397312-21397331 | None:intergenic | 25.0% |
| ! | TTTACAAATGAACTACAGAA+TGG | - | chr7_1:21397437-21397456 | Msa1013920:intron | 25.0% |
| !!! | GTTGAGTATTTTGAAAAAAG+TGG | - | chr7_1:21397575-21397594 | Msa1013920:intron | 25.0% |
| ! | AATCACAACCAAAATCAATT+AGG | + | chr7_1:21397817-21397836 | None:intergenic | 25.0% |
| ! | TTGTGCAAAATATAAACAAG+AGG | - | chr7_1:21397877-21397896 | Msa1013920:intron | 25.0% |
| ! | CTTAGATACAAAAATCAAAG+GGG | + | chr7_1:21398077-21398096 | None:intergenic | 25.0% |
| ! | CCTTAGATACAAAAATCAAA+GGG | + | chr7_1:21398078-21398097 | None:intergenic | 25.0% |
| ! | GTAAAGTTATGCAATAAATC+TGG | - | chr7_1:21398247-21398266 | Msa1013920:intron | 25.0% |
| AAACAGTTGAAATTGAAGCA+CGG | + | chr7_1:21393548-21393567 | None:intergenic | 30.0% | |
| ! | TGCAATTCTTCTAATGCTTT+TGG | - | chr7_1:21393697-21393716 | Msa1013920:CDS | 30.0% |
| AATGTAATCACATATGTCAC+TGG | + | chr7_1:21393899-21393918 | None:intergenic | 30.0% | |
| !!! | TTTTGAATTACCGATTCGTT+TGG | + | chr7_1:21394048-21394067 | None:intergenic | 30.0% |
| !!! | GTGTGTGTGTGTTTTTTTTA+AGG | - | chr7_1:21394075-21394094 | Msa1013920:CDS | 30.0% |
| ATTTCATCTTCAAAGTAACG+GGG | - | chr7_1:21394135-21394154 | Msa1013920:CDS | 30.0% | |
| AAAAGGAGAAAAAGTGAAGT+GGG | + | chr7_1:21394247-21394266 | None:intergenic | 30.0% | |
| AAAAAGGAGAAAAAGTGAAG+TGG | + | chr7_1:21394248-21394267 | None:intergenic | 30.0% | |
| AAGAGAGAAAAAACAAAACG+TGG | - | chr7_1:21394619-21394638 | Msa1013920:CDS | 30.0% | |
| AGAGAGAAAAAACAAAACGT+GGG | - | chr7_1:21394620-21394639 | Msa1013920:CDS | 30.0% | |
| AACAATGAAACATTCTTCCA+TGG | - | chr7_1:21394684-21394703 | Msa1013920:intron | 30.0% | |
| ! | TTATTCGATTTGAGAGAGAA+AGG | - | chr7_1:21395057-21395076 | Msa1013920:intron | 30.0% |
| !! | ACACCAACTTACTTTTATGA+AGG | - | chr7_1:21395442-21395461 | Msa1013920:intron | 30.0% |
| ACACCTTCATAAAAGTAAGT+TGG | + | chr7_1:21395448-21395467 | None:intergenic | 30.0% | |
| TATGTTTATGTTCAATGGTC+GGG | + | chr7_1:21395787-21395806 | None:intergenic | 30.0% | |
| !!! | CTTTATTTTTGTATCACGGT+GGG | - | chr7_1:21395961-21395980 | Msa1013920:intron | 30.0% |
| TTAGGGATATAAATTACTCC+AGG | - | chr7_1:21396173-21396192 | Msa1013920:intron | 30.0% | |
| TTGAGACCTTAATTAATGCA+GGG | - | chr7_1:21396311-21396330 | Msa1013920:intron | 30.0% | |
| TATTTGGCACGTTAAAAAGT+AGG | - | chr7_1:21396604-21396623 | Msa1013920:intron | 30.0% | |
| ATTTGGCACGTTAAAAAGTA+GGG | - | chr7_1:21396605-21396624 | Msa1013920:intron | 30.0% | |
| ATATTATTAGAGGGGATGTT+GGG | + | chr7_1:21396681-21396700 | None:intergenic | 30.0% | |
| AATATTATTAGAGGGGATGT+TGG | + | chr7_1:21396682-21396701 | None:intergenic | 30.0% | |
| ! | GTTTATTTAGAATCCTATGG+AGG | + | chr7_1:21396744-21396763 | None:intergenic | 30.0% |
| !!! | TAGTTTTAGCTTACGGTTAT+TGG | - | chr7_1:21396796-21396815 | Msa1013920:intron | 30.0% |
| TACGGTTATTGGTAAATACT+TGG | - | chr7_1:21396807-21396826 | Msa1013920:intron | 30.0% | |
| !!! | ATATTTTTTCAATGGCAGTG+TGG | - | chr7_1:21396850-21396869 | Msa1013920:intron | 30.0% |
| TAAGAGAAAAGTTTACCTGA+AGG | + | chr7_1:21397002-21397021 | None:intergenic | 30.0% | |
| TTGCAAAAGCAAGGATATAT+TGG | + | chr7_1:21397105-21397124 | None:intergenic | 30.0% | |
| TGACCTCAACTTATTAAAAC+TGG | - | chr7_1:21397229-21397248 | Msa1013920:intron | 30.0% | |
| !! | TCTCCAGTTTTAATAAGTTG+AGG | + | chr7_1:21397235-21397254 | None:intergenic | 30.0% |
| ACTAACAATGAAGTAGGAAT+CGG | + | chr7_1:21397306-21397325 | None:intergenic | 30.0% | |
| AAGAAAAAAAAAACCTAGCG+AGG | + | chr7_1:21397418-21397437 | None:intergenic | 30.0% | |
| !! | TCTCAATGCCTAATTGATTT+TGG | - | chr7_1:21397806-21397825 | Msa1013920:intron | 30.0% |
| ! | TTTTGCACAAATCATCAAAG+CGG | + | chr7_1:21397867-21397886 | None:intergenic | 30.0% |
| !! | CCCTTTGATTTTTGTATCTA+AGG | - | chr7_1:21398075-21398094 | Msa1013920:intron | 30.0% |
| GCCTTAGATACAAAAATCAA+AGG | + | chr7_1:21398079-21398098 | None:intergenic | 30.0% | |
| !! | TTGATTTTTGTATCTAAGGC+AGG | - | chr7_1:21398079-21398098 | Msa1013920:intron | 30.0% |
| TGCTTGAATTTACACTTGAA+AGG | - | chr7_1:21398329-21398348 | Msa1013920:intron | 30.0% | |
| GCTTGAATTTACACTTGAAA+GGG | - | chr7_1:21398330-21398349 | Msa1013920:intron | 30.0% | |
| CTTGAATTTACACTTGAAAG+GGG | - | chr7_1:21398331-21398350 | Msa1013920:intron | 30.0% | |
| TGTAATGCTAAAAATGCAAG+AGG | - | chr7_1:21398547-21398566 | Msa1013920:intron | 30.0% | |
| GAATTTCTTTGCAAGTAGAA+GGG | + | chr7_1:21398581-21398600 | None:intergenic | 30.0% | |
| TACGTAATTGTTTCACATGT+GGG | + | chr7_1:21398711-21398730 | None:intergenic | 30.0% | |
| ATACGTAATTGTTTCACATG+TGG | + | chr7_1:21398712-21398731 | None:intergenic | 30.0% | |
| GTTTACTGGGAAAATCTGTT+TGG | + | chr7_1:21393229-21393248 | None:intergenic | 35.0% | |
| !!! | GCTTTTTGTTGTTGTTGTTG+TGG | - | chr7_1:21393573-21393592 | Msa1013920:CDS | 35.0% |
| TAATCTTAACCTCTGTAGCA+TGG | - | chr7_1:21393845-21393864 | Msa1013920:CDS | 35.0% | |
| TGTTAGAGATCCAAACGAAT+CGG | - | chr7_1:21394035-21394054 | Msa1013920:CDS | 35.0% | |
| AAATCCATCAATAAACGCGA+AGG | + | chr7_1:21394188-21394207 | None:intergenic | 35.0% | |
| AAAGGAGAAAAAGTGAAGTG+GGG | + | chr7_1:21394246-21394265 | None:intergenic | 35.0% | |
| GGGGACATATAATAATGTGA+AGG | + | chr7_1:21394296-21394315 | None:intergenic | 35.0% | |
| ! | CTCGCTTTAGATATAGAAGT+AGG | + | chr7_1:21394347-21394366 | None:intergenic | 35.0% |
| ! | CTACTTCTATATCTAAAGCG+AGG | - | chr7_1:21394345-21394364 | Msa1013920:CDS | 35.0% |
| ACAAAACGTGGGTAAAAATG+AGG | - | chr7_1:21394631-21394650 | Msa1013920:intron | 35.0% | |
| GGTGTGAGTTGTGTTATATA+TGG | - | chr7_1:21394810-21394829 | Msa1013920:intron | 35.0% | |
| ! | AACTTGTTCTTGAAGAAGGA+TGG | + | chr7_1:21394891-21394910 | None:intergenic | 35.0% |
| AATTTGTGAAGGTGAAGATG+GGG | + | chr7_1:21395028-21395047 | None:intergenic | 35.0% | |
| CAATTTGTGAAGGTGAAGAT+GGG | + | chr7_1:21395029-21395048 | None:intergenic | 35.0% | |
| TTAATAATAACGCCGCAGTT+TGG | + | chr7_1:21395182-21395201 | None:intergenic | 35.0% | |
| CTAAAAGACACCTTCACAAA+AGG | + | chr7_1:21395393-21395412 | None:intergenic | 35.0% | |
| AAAGTGAAAATCACACCTTG+AGG | - | chr7_1:21395490-21395509 | Msa1013920:intron | 35.0% | |
| AAAGGCAGGAGAAATAAAAC+TGG | - | chr7_1:21395633-21395652 | Msa1013920:CDS | 35.0% | |
| AAATAAAACTGGAGAGGATC+CGG | - | chr7_1:21395644-21395663 | Msa1013920:CDS | 35.0% | |
| TTAACTCATCCTCTCAACAA+TGG | + | chr7_1:21395672-21395691 | None:intergenic | 35.0% | |
| !!! | GCTTTATTTTTGTATCACGG+TGG | - | chr7_1:21395960-21395979 | Msa1013920:intron | 35.0% |
| ! | TTTTTGTAAAAGCTACACGC+TGG | + | chr7_1:21396007-21396026 | None:intergenic | 35.0% |
| GGTAAGTTTCCAAAATTCAC+GGG | + | chr7_1:21396042-21396061 | None:intergenic | 35.0% | |
| CGGTAAGTTTCCAAAATTCA+CGG | + | chr7_1:21396043-21396062 | None:intergenic | 35.0% | |
| AATTACTCCAGGCTATTAAC+AGG | - | chr7_1:21396184-21396203 | Msa1013920:intron | 35.0% | |
| AAATCAACCTGTTAATAGCC+TGG | + | chr7_1:21396194-21396213 | None:intergenic | 35.0% | |
| TTCTTGAAATGACAGAGTGT+TGG | - | chr7_1:21396214-21396233 | Msa1013920:intron | 35.0% | |
| AGGTCTCAAGAATATCAAGA+TGG | + | chr7_1:21396300-21396319 | None:intergenic | 35.0% | |
| CTTGAGACCTTAATTAATGC+AGG | - | chr7_1:21396310-21396329 | Msa1013920:intron | 35.0% | |
| TGAGACCTTAATTAATGCAG+GGG | - | chr7_1:21396312-21396331 | Msa1013920:intron | 35.0% | |
| AAAACAATTGCAGATGCTTC+AGG | + | chr7_1:21396576-21396595 | None:intergenic | 35.0% | |
| CTAGGAAGAAGACAATATCA+TGG | + | chr7_1:21396632-21396651 | None:intergenic | 35.0% | |
| TGATATTGTCTTCTTCCTAG+AGG | - | chr7_1:21396632-21396651 | Msa1013920:intron | 35.0% | |
| TATTATTAGAGGGGATGTTG+GGG | + | chr7_1:21396680-21396699 | None:intergenic | 35.0% | |
| !! | ATTTAGCTTTCATCCTCCAT+AGG | - | chr7_1:21396728-21396747 | Msa1013920:intron | 35.0% |
| CATTACAATCCACATTTGTG+TGG | + | chr7_1:21396930-21396949 | None:intergenic | 35.0% | |
| TGGTAATCAAAGGTTTGAAG+CGG | + | chr7_1:21397026-21397045 | None:intergenic | 35.0% | |
| CTAACTGAACTGGTAATCAA+AGG | + | chr7_1:21397036-21397055 | None:intergenic | 35.0% | |
| CTTTGATTACCAGTTCAGTT+AGG | - | chr7_1:21397034-21397053 | Msa1013920:intron | 35.0% | |
| TCTTGTTAACCTAACTGAAC+TGG | + | chr7_1:21397046-21397065 | None:intergenic | 35.0% | |
| GATGGAAAATTGCAAAAGCA+AGG | + | chr7_1:21397114-21397133 | None:intergenic | 35.0% | |
| ATGTAACAGTAGTTCACAGA+TGG | + | chr7_1:21397132-21397151 | None:intergenic | 35.0% | |
| GTGATTCAATATCGCTTGAT+GGG | + | chr7_1:21397190-21397209 | None:intergenic | 35.0% | |
| !! | ATTTTGTTATCAGTCTGCCA+AGG | - | chr7_1:21397254-21397273 | Msa1013920:intron | 35.0% |
| CCTAACATCATTAAAAGAGG+TGG | + | chr7_1:21397283-21397302 | None:intergenic | 35.0% | |
| ! | CCACCTCTTTTAATGATGTT+AGG | - | chr7_1:21397280-21397299 | Msa1013920:intron | 35.0% |
| !! | TGATTAGTTAGCTCTGTTGA+TGG | - | chr7_1:21397336-21397355 | Msa1013920:intron | 35.0% |
| !! | TCTGTTGATGGTCTCATAAT+TGG | - | chr7_1:21397348-21397367 | Msa1013920:intron | 35.0% |
| ! | CAACTAGAAATGATAGTGAG+AGG | + | chr7_1:21397380-21397399 | None:intergenic | 35.0% |
| !!! | AATTTTAACTGATCCTCGCT+AGG | - | chr7_1:21397402-21397421 | Msa1013920:intron | 35.0% |
| ! | AACTATTTGAGACATGTTGC+AGG | + | chr7_1:21397619-21397638 | None:intergenic | 35.0% |
| GTCTCAAATAGTTGTCATTG+TGG | - | chr7_1:21397626-21397645 | Msa1013920:intron | 35.0% | |
| GTTAGGATACTCTTAGAATG+TGG | - | chr7_1:21397695-21397714 | Msa1013920:intron | 35.0% | |
| !! | ATTAGGCATTGAGATATTGC+AGG | + | chr7_1:21397800-21397819 | None:intergenic | 35.0% |
| ! | AGTGTCTCAAAGTACTAACA+AGG | - | chr7_1:21397900-21397919 | Msa1013920:intron | 35.0% |
| ! | GTGTCTCAAAGTACTAACAA+GGG | - | chr7_1:21397901-21397920 | Msa1013920:intron | 35.0% |
| !! | GTGGTGGATGTAATTAGAAA+TGG | - | chr7_1:21398016-21398035 | Msa1013920:intron | 35.0% |
| !! | GTAGAAGTATTGCTGGATTT+GGG | + | chr7_1:21398049-21398068 | None:intergenic | 35.0% |
| !! | AGTAGAAGTATTGCTGGATT+TGG | + | chr7_1:21398050-21398069 | None:intergenic | 35.0% |
| !! | GGAAAAAGTAGAAGTATTGC+TGG | + | chr7_1:21398056-21398075 | None:intergenic | 35.0% |
| CTTGACTATCAAGATGATAG+TGG | - | chr7_1:21398148-21398167 | Msa1013920:intron | 35.0% | |
| TTTCGATTGCTTGTATATGC+TGG | - | chr7_1:21398217-21398236 | Msa1013920:intron | 35.0% | |
| GAAAGGGGTAATCAAAATAC+TGG | - | chr7_1:21398346-21398365 | Msa1013920:intron | 35.0% | |
| ATTCACATCAAAACCTTTGC+TGG | + | chr7_1:21398434-21398453 | None:intergenic | 35.0% | |
| TTTGATGTGAATGTTCCAGA+TGG | - | chr7_1:21398442-21398461 | Msa1013920:intron | 35.0% | |
| TTGATGTGAATGTTCCAGAT+GGG | - | chr7_1:21398443-21398462 | Msa1013920:intron | 35.0% | |
| CGAATTTCTTTGCAAGTAGA+AGG | + | chr7_1:21398582-21398601 | None:intergenic | 35.0% | |
| TTGCAAAGAAATTCGCAGAA+GGG | - | chr7_1:21398587-21398606 | Msa1013920:intron | 35.0% | |
| ! | TTTTGTGTGCTTCTGAACAT+AGG | + | chr7_1:21398674-21398693 | None:intergenic | 35.0% |
| ! | TTCAGAAGCACACAAAATGT+GGG | - | chr7_1:21398677-21398696 | Msa1013920:CDS | 35.0% |
| GGTGCTTACTAACAAGAATA+GGG | - | chr7_1:21398873-21398892 | Msa1013920:CDS | 35.0% | |
| GGTATTAAACTTGTAACGAG+AGG | - | chr7_1:21398949-21398968 | Msa1013920:five_prime_UTR | 35.0% | |
| GTGGAGAATACTGTCATTGT+TGG | + | chr7_1:21393207-21393226 | None:intergenic | 40.0% | |
| TACTGGGAAAATCTGTTTGG+TGG | + | chr7_1:21393226-21393245 | None:intergenic | 40.0% | |
| CTTCGGTTTCGTAGTTTACT+GGG | + | chr7_1:21393242-21393261 | None:intergenic | 40.0% | |
| ACTTCGGTTTCGTAGTTTAC+TGG | + | chr7_1:21393243-21393262 | None:intergenic | 40.0% | |
| GTTGACATCAACAGAAGGAT+CGG | + | chr7_1:21393328-21393347 | None:intergenic | 40.0% | |
| ACTCTTCAAACTAACAGCTC+CGG | + | chr7_1:21393355-21393374 | None:intergenic | 40.0% | |
| TCGAGTTTGTGTTGAGTTTC+AGG | - | chr7_1:21393413-21393432 | Msa1013920:CDS | 40.0% | |
| GCATGAACAGCAAGAAAAAG+AGG | + | chr7_1:21393459-21393478 | None:intergenic | 40.0% | |
| !!! | CTTTTTCTTGCTGTTCATGC+TGG | - | chr7_1:21393459-21393478 | Msa1013920:CDS | 40.0% |
| !! | TGAGCTTGTTAGGAAGTTAC+TGG | - | chr7_1:21393488-21393507 | Msa1013920:CDS | 40.0% |
| GTAATCACTTCGTCATTGCT+CGG | - | chr7_1:21393510-21393529 | Msa1013920:CDS | 40.0% | |
| CAATGTATCTGTGTTTGCGT+CGG | - | chr7_1:21393944-21393963 | Msa1013920:CDS | 40.0% | |
| GAAACCTTCGCGTTTATTGA+TGG | - | chr7_1:21394181-21394200 | Msa1013920:CDS | 40.0% | |
| CATTAGGCCATGATTGTTGA+GGG | - | chr7_1:21394494-21394513 | Msa1013920:CDS | 40.0% | |
| CAGGATATATAATGCAGGAG+GGG | + | chr7_1:21394528-21394547 | None:intergenic | 40.0% | |
| GCAGGATATATAATGCAGGA+GGG | + | chr7_1:21394529-21394548 | None:intergenic | 40.0% | |
| GATGGCAGGATATATAATGC+AGG | + | chr7_1:21394533-21394552 | None:intergenic | 40.0% | |
| GTTTCATTGTTGCTGCAAAC+TGG | + | chr7_1:21394675-21394694 | None:intergenic | 40.0% | |
| ! | CCAGAACTTGTTCTTGAAGA+AGG | + | chr7_1:21394895-21394914 | None:intergenic | 40.0% |
| CCTTCTTCAAGAACAAGTTC+TGG | - | chr7_1:21394892-21394911 | Msa1013920:intron | 40.0% | |
| ! | GTTCAGGTTATTCGTGAAGA+AGG | + | chr7_1:21394988-21395007 | None:intergenic | 40.0% |
| GCAATTTGTGAAGGTGAAGA+TGG | + | chr7_1:21395030-21395049 | None:intergenic | 40.0% | |
| !! | GCTTTGAAATTGTCGAATCG+CGG | - | chr7_1:21395118-21395137 | Msa1013920:CDS | 40.0% |
| TTGTCGAATTGTCCAAACTG+CGG | - | chr7_1:21395167-21395186 | Msa1013920:CDS | 40.0% | |
| GTATTCGTTCTCAGCAATGA+AGG | - | chr7_1:21395212-21395231 | Msa1013920:CDS | 40.0% | |
| GTGTGTGATCTGCTTTCAAT+GGG | - | chr7_1:21395237-21395256 | Msa1013920:intron | 40.0% | |
| ! | CTAGAAGACACCTTTTGTGA+AGG | - | chr7_1:21395380-21395399 | Msa1013920:intron | 40.0% |
| ! | TTTTAGCAAGTCACACCTCA+AGG | + | chr7_1:21395508-21395527 | None:intergenic | 40.0% |
| TTGCTAAAAGACACCACCAA+AGG | - | chr7_1:21395519-21395538 | Msa1013920:intron | 40.0% | |
| TGCTAAAAGACACCACCAAA+GGG | - | chr7_1:21395520-21395539 | Msa1013920:intron | 40.0% | |
| ATTTCACGTATGGGATCTCA+AGG | - | chr7_1:21395573-21395592 | Msa1013920:CDS | 40.0% | |
| CAGGAGAAATAAAACTGGAG+AGG | - | chr7_1:21395638-21395657 | Msa1013920:CDS | 40.0% | |
| GTAAACCAAAAGCTCTTCAG+AGG | - | chr7_1:21396244-21396263 | Msa1013920:intron | 40.0% | |
| TGTGGTTGAGACACTCATAA+AGG | - | chr7_1:21396483-21396502 | Msa1013920:intron | 40.0% | |
| ATTATTAGAGGGGATGTTGG+GGG | + | chr7_1:21396679-21396698 | None:intergenic | 40.0% | |
| CAAATAATAAGCTGGAGCAC+TGG | + | chr7_1:21396776-21396795 | None:intergenic | 40.0% | |
| !! | TAAGTGACTGTAAAAGCACC+CGG | + | chr7_1:21396897-21396916 | None:intergenic | 40.0% |
| TAGTTGCAGCTGTAGTTCAT+AGG | - | chr7_1:21396953-21396972 | Msa1013920:intron | 40.0% | |
| CGTGATTCAATATCGCTTGA+TGG | + | chr7_1:21397191-21397210 | None:intergenic | 40.0% | |
| CGGCCTAACATCATTAAAAG+AGG | + | chr7_1:21397286-21397305 | None:intergenic | 40.0% | |
| !!! | CTACGACGGATTTTGAAGTA+AGG | - | chr7_1:21397462-21397481 | Msa1013920:intron | 40.0% |
| !!! | ACGGATTTTGAAGTAAGGCT+TGG | - | chr7_1:21397467-21397486 | Msa1013920:intron | 40.0% |
| AAAATACTCAACTGCACACC+AGG | + | chr7_1:21397567-21397586 | None:intergenic | 40.0% | |
| ! | CTTAGAATGTGGTGCTAATG+TGG | - | chr7_1:21397706-21397725 | Msa1013920:intron | 40.0% |
| !!! | CTTGCTGGTTGTTTTGACAA+GGG | + | chr7_1:21397735-21397754 | None:intergenic | 40.0% |
| !!! | TCTTGCTGGTTGTTTTGACA+AGG | + | chr7_1:21397736-21397755 | None:intergenic | 40.0% |
| ! | CACTGCTTGTTGAAAACCAT+AGG | + | chr7_1:21397999-21398018 | None:intergenic | 40.0% |
| ! | CTATGGTTTTCAACAAGCAG+TGG | - | chr7_1:21397997-21398016 | Msa1013920:intron | 40.0% |
| !! | AGATGATAGTGGTTTCTCAG+CGG | - | chr7_1:21398159-21398178 | Msa1013920:intron | 40.0% |
| GCTATGCATACAGCTATGAA+AGG | - | chr7_1:21398181-21398200 | Msa1013920:intron | 40.0% | |
| AGGGGTAATCAAAATACTGG+TGG | - | chr7_1:21398349-21398368 | Msa1013920:intron | 40.0% | |
| TGATGTGAATGTTCCAGATG+GGG | - | chr7_1:21398444-21398463 | Msa1013920:intron | 40.0% | |
| AAAGCTTACAAAGGGATGCA+TGG | + | chr7_1:21398507-21398526 | None:intergenic | 40.0% | |
| CTTGCAAAGAAATTCGCAGA+AGG | - | chr7_1:21398586-21398605 | Msa1013920:intron | 40.0% | |
| ! | GTTCAGAAGCACACAAAATG+TGG | - | chr7_1:21398676-21398695 | Msa1013920:CDS | 40.0% |
| AAGCACACAAAATGTGGGAA+GGG | - | chr7_1:21398682-21398701 | Msa1013920:CDS | 40.0% | |
| TTACGTATGTTGCGTTCTTC+AGG | - | chr7_1:21398724-21398743 | Msa1013920:CDS | 40.0% | |
| ! | TTCTTCAGGTGTGCTTTGTT+GGG | - | chr7_1:21398738-21398757 | Msa1013920:CDS | 40.0% |
| TTTCTACGCAATGTTGAGCT+TGG | + | chr7_1:21398811-21398830 | None:intergenic | 40.0% | |
| GCTCAACATTGCGTAGAAAT+AGG | - | chr7_1:21398812-21398831 | Msa1013920:CDS | 40.0% | |
| AGAAGAACCTGGAATGTTCA+GGG | - | chr7_1:21398852-21398871 | Msa1013920:CDS | 40.0% | |
| GGGTGCTTACTAACAAGAAT+AGG | - | chr7_1:21398872-21398891 | Msa1013920:CDS | 40.0% | |
| GCTTACTAACAAGAATAGGG+AGG | - | chr7_1:21398876-21398895 | Msa1013920:exon | 40.0% | |
| ! | ACTGTCATTGTTGGTGAGTG+CGG | + | chr7_1:21393198-21393217 | None:intergenic | 45.0% |
| !! | TAGAAGGCGTTGTGAGACTT+CGG | + | chr7_1:21393259-21393278 | None:intergenic | 45.0% |
| GCGAAGTTGACATCAACAGA+AGG | + | chr7_1:21393333-21393352 | None:intergenic | 45.0% | |
| TCTGTTGATGTCAACTTCGC+CGG | - | chr7_1:21393333-21393352 | Msa1013920:CDS | 45.0% | |
| ! | CTGGAAATGCTGAGCTTGTT+AGG | - | chr7_1:21393478-21393497 | Msa1013920:CDS | 45.0% |
| TAGATGTGTCCATGCTACAG+AGG | + | chr7_1:21393857-21393876 | None:intergenic | 45.0% | |
| ! | TCATCTTCAAAGTAACGGGG+TGG | - | chr7_1:21394138-21394157 | Msa1013920:CDS | 45.0% |
| GCATTAGGCCATGATTGTTG+AGG | - | chr7_1:21394493-21394512 | Msa1013920:CDS | 45.0% | |
| GGCAGGATATATAATGCAGG+AGG | + | chr7_1:21394530-21394549 | None:intergenic | 45.0% | |
| TGGATTGAAAGCTGGAGAGA+TGG | + | chr7_1:21394551-21394570 | None:intergenic | 45.0% | |
| CTCTCCAGCTTTCAATCCAA+CGG | - | chr7_1:21394552-21394571 | Msa1013920:CDS | 45.0% | |
| TCTTTGTAACTCTCAGCCGT+TGG | + | chr7_1:21394571-21394590 | None:intergenic | 45.0% | |
| CAGGTTATTCGTGAAGAAGG+AGG | + | chr7_1:21394985-21395004 | None:intergenic | 45.0% | |
| TAACGTTCACGAAGCTGTTC+AGG | + | chr7_1:21395004-21395023 | None:intergenic | 45.0% | |
| TTCGTTCTCAGCAATGAAGG+TGG | - | chr7_1:21395215-21395234 | Msa1013920:CDS | 45.0% | |
| GGTGTGTGATCTGCTTTCAA+TGG | - | chr7_1:21395236-21395255 | Msa1013920:intron | 45.0% | |
| ATATTTGGGAGGCAGAGAAG+TGG | - | chr7_1:21395278-21395297 | Msa1013920:intron | 45.0% | |
| TAAAAGACACCACCAAAGGG+TGG | - | chr7_1:21395523-21395542 | Msa1013920:intron | 45.0% | |
| CATCCTCTCAACAATGGATC+CGG | + | chr7_1:21395666-21395685 | None:intergenic | 45.0% | |
| ATATAAGTGGGGCCTGAAGA+GGG | + | chr7_1:21395848-21395867 | None:intergenic | 45.0% | |
| TATATAAGTGGGGCCTGAAG+AGG | + | chr7_1:21395849-21395868 | None:intergenic | 45.0% | |
| !! | CGGTGGGTTTGTTGAAATCA+CGG | - | chr7_1:21395977-21395996 | Msa1013920:intron | 45.0% |
| ! | CAATGGCTACCCGTGAATTT+TGG | - | chr7_1:21396030-21396049 | Msa1013920:intron | 45.0% |
| !! | CAAAGCCTCTGAAGAGCTTT+TGG | + | chr7_1:21396252-21396271 | None:intergenic | 45.0% |
| GGATGCCCCTGCATTAATTA+AGG | + | chr7_1:21396320-21396339 | None:intergenic | 45.0% | |
| AGAAGAGCTTCTTCACAAGC+TGG | + | chr7_1:21396346-21396365 | None:intergenic | 45.0% | |
| AGCTTGTGAAGAAGCTCTTC+TGG | - | chr7_1:21396345-21396364 | Msa1013920:intron | 45.0% | |
| TTGTGAAGAAGCTCTTCTGG+AGG | - | chr7_1:21396348-21396367 | Msa1013920:intron | 45.0% | |
| ! | TTCTGGAGGCAAGTTACCAT+GGG | - | chr7_1:21396362-21396381 | Msa1013920:intron | 45.0% |
| AGAGCGTGTACAGCAATATG+CGG | + | chr7_1:21396433-21396452 | None:intergenic | 45.0% | |
| TATTGCTGTACACGCTCTTG+TGG | - | chr7_1:21396435-21396454 | Msa1013920:intron | 45.0% | |
| TTGTCTTCTTCCTAGAGGCT+TGG | - | chr7_1:21396637-21396656 | Msa1013920:intron | 45.0% | |
| TGTCTTCTTCCTAGAGGCTT+GGG | - | chr7_1:21396638-21396657 | Msa1013920:intron | 45.0% | |
| TCCACATTTGTGTGGAGAGA+AGG | + | chr7_1:21396922-21396941 | None:intergenic | 45.0% | |
| GAAGGAGCAAACTGACAACA+TGG | + | chr7_1:21396984-21397003 | None:intergenic | 45.0% | |
| ! | TGTTGTCAGTTTGCTCCTTC+AGG | - | chr7_1:21396984-21397003 | Msa1013920:intron | 45.0% |
| ATTAAAAGAGGTGGCTGCCT+TGG | + | chr7_1:21397274-21397293 | None:intergenic | 45.0% | |
| !! | ACTACAGAATGGTGCTACGA+CGG | - | chr7_1:21397448-21397467 | Msa1013920:intron | 45.0% |
| TTGAAGTAAGGCTTGGAGCA+TGG | - | chr7_1:21397474-21397493 | Msa1013920:intron | 45.0% | |
| TGGTCATGGGATAATGCAAC+TGG | - | chr7_1:21397494-21397513 | Msa1013920:intron | 45.0% | |
| CTACACCATGCTATCCTTTG+TGG | - | chr7_1:21397659-21397678 | Msa1013920:intron | 45.0% | |
| CATTGCCACAAAGGATAGCA+TGG | + | chr7_1:21397667-21397686 | None:intergenic | 45.0% | |
| TATCCTTTGTGGCAATGTCG+AGG | - | chr7_1:21397670-21397689 | Msa1013920:intron | 45.0% | |
| CATGTGTACAGGAAGGAACT+CGG | + | chr7_1:21397759-21397778 | None:intergenic | 45.0% | |
| TTGAACTCTCGAACAGACTC+TGG | - | chr7_1:21397836-21397855 | Msa1013920:intron | 45.0% | |
| ! | CTCAAAGTACTAACAAGGGC+TGG | - | chr7_1:21397905-21397924 | Msa1013920:intron | 45.0% |
| ATAGGACCACTTGTACGACT+CGG | + | chr7_1:21397981-21398000 | None:intergenic | 45.0% | |
| ! | TGGTTTTCAACAAGCAGTGG+TGG | - | chr7_1:21398000-21398019 | Msa1013920:intron | 45.0% |
| GTTACATTGCTGACCAGCAA+AGG | - | chr7_1:21398418-21398437 | Msa1013920:intron | 45.0% | |
| TCCACTCATGTTAGCAGCAA+GGG | - | chr7_1:21398477-21398496 | Msa1013920:intron | 45.0% | |
| AGAAGGGAAAAACGAAGCAG+AGG | - | chr7_1:21398603-21398622 | Msa1013920:CDS | 45.0% | |
| GAAGGGAAAAACGAAGCAGA+GGG | - | chr7_1:21398604-21398623 | Msa1013920:CDS | 45.0% | |
| AGATGAACTTGCCCGTAAAC+TGG | - | chr7_1:21398636-21398655 | Msa1013920:CDS | 45.0% | |
| GAAGCACACAAAATGTGGGA+AGG | - | chr7_1:21398681-21398700 | Msa1013920:CDS | 45.0% | |
| GTTCTTCAGGTGTGCTTTGT+TGG | - | chr7_1:21398737-21398756 | Msa1013920:CDS | 45.0% | |
| ! | TCTTCAGGTGTGCTTTGTTG+GGG | - | chr7_1:21398739-21398758 | Msa1013920:CDS | 45.0% |
| CGTAGAAATAGGCACAACAC+AGG | - | chr7_1:21398823-21398842 | Msa1013920:CDS | 45.0% | |
| CAGAAGAACCTGGAATGTTC+AGG | - | chr7_1:21398851-21398870 | Msa1013920:CDS | 45.0% | |
| GAGGTGCATTTCGTATGTGA+GGG | - | chr7_1:21398895-21398914 | Msa1013920:five_prime_UTR | 45.0% | |
| TGCATTTCGTATGTGAGGGA+GGG | - | chr7_1:21398899-21398918 | Msa1013920:five_prime_UTR | 45.0% | |
| !! | AGAAAAAATTAATAAAAAAA+TGG | - | chr7_1:21394588-21394607 | Msa1013920:CDS | 5.0% |
| !!! | TTTTTTTATTTTATATAAGT+GGG | + | chr7_1:21395860-21395879 | None:intergenic | 5.0% |
| !!! | ATTTTTTTATTTTATATAAG+TGG | + | chr7_1:21395861-21395880 | None:intergenic | 5.0% |
| !!! | ATTTATAAAAAATCTATTTT+TGG | - | chr7_1:21395882-21395901 | Msa1013920:intron | 5.0% |
| AGGGAGTGGTGGTTAGAGAT+AGG | + | chr7_1:21393163-21393182 | None:intergenic | 50.0% | |
| AAAGGCTAAGGACAGATCGC+CGG | + | chr7_1:21393295-21393314 | None:intergenic | 50.0% | |
| GGAGATGCAGTGAAAGGCTA+AGG | + | chr7_1:21393307-21393326 | None:intergenic | 50.0% | |
| AGGATCGGAGATGCAGTGAA+AGG | + | chr7_1:21393313-21393332 | None:intergenic | 50.0% | |
| GCCATGATTGTTGAGGGATG+CGG | - | chr7_1:21394500-21394519 | Msa1013920:CDS | 50.0% | |
| TCCGCATCCCTCAACAATCA+TGG | + | chr7_1:21394504-21394523 | None:intergenic | 50.0% | |
| TTGAAAGCTGGAGAGATGGC+AGG | + | chr7_1:21394547-21394566 | None:intergenic | 50.0% | |
| TCAGCCGTTGGATTGAAAGC+TGG | + | chr7_1:21394559-21394578 | None:intergenic | 50.0% | |
| TGTACGACTTCAGCAGCAAG+AGG | + | chr7_1:21395098-21395117 | None:intergenic | 50.0% | |
| TCTTGCTACAAGCCACCCTT+TGG | + | chr7_1:21395538-21395557 | None:intergenic | 50.0% | |
| ! | TTGTCCTGCGCTGATATCAG+CGG | + | chr7_1:21395615-21395634 | None:intergenic | 50.0% |
| CTGATATCAGCGCAGGACAA+AGG | - | chr7_1:21395615-21395634 | Msa1013920:CDS | 50.0% | |
| GATCCGGATCCATTGTTGAG+AGG | - | chr7_1:21395660-21395679 | Msa1013920:CDS | 50.0% | |
| TGGTCGGGACAACATGGTAT+GGG | + | chr7_1:21395772-21395791 | None:intergenic | 50.0% | |
| ATGGTCGGGACAACATGGTA+TGG | + | chr7_1:21395773-21395792 | None:intergenic | 50.0% | |
| GTTCAATGGTCGGGACAACA+TGG | + | chr7_1:21395778-21395797 | None:intergenic | 50.0% | |
| TGCATGATGCATCCCTCTTC+AGG | - | chr7_1:21395833-21395852 | Msa1013920:CDS | 50.0% | |
| TTGCAACTACTGCAGCAGTG+AGG | - | chr7_1:21396269-21396288 | Msa1013920:intron | 50.0% | |
| TGCAACTACTGCAGCAGTGA+GGG | - | chr7_1:21396270-21396289 | Msa1013920:intron | 50.0% | |
| AGCTTCTTCACAAGCTGGCT+GGG | + | chr7_1:21396341-21396360 | None:intergenic | 50.0% | |
| ! | CTTCTGGAGGCAAGTTACCA+TGG | - | chr7_1:21396361-21396380 | Msa1013920:intron | 50.0% |
| CAAGTTACCATGGGCAAGCA+GGG | - | chr7_1:21396371-21396390 | Msa1013920:intron | 50.0% | |
| TCAGTTGTACCCAAGCCTCT+AGG | + | chr7_1:21396650-21396669 | None:intergenic | 50.0% | |
| !! | TAATAAGCTGGAGCACTGGC+AGG | + | chr7_1:21396772-21396791 | None:intergenic | 50.0% |
| ! | TTTTCAATGGCAGTGTGGCG+TGG | - | chr7_1:21396855-21396874 | Msa1013920:intron | 50.0% |
| GCCTTCTCTCCACACAAATG+TGG | - | chr7_1:21396918-21396937 | Msa1013920:intron | 50.0% | |
| TGCAGCTGTAGTTCATAGGC+AGG | - | chr7_1:21396957-21396976 | Msa1013920:intron | 50.0% | |
| TAAGGCTTGGAGCATGGTCA+TGG | - | chr7_1:21397480-21397499 | Msa1013920:intron | 50.0% | |
| AAGGCTTGGAGCATGGTCAT+GGG | - | chr7_1:21397481-21397500 | Msa1013920:intron | 50.0% | |
| AACTGGCGAAGAACTTCGTG+TGG | - | chr7_1:21397511-21397530 | Msa1013920:intron | 50.0% | |
| ACTGGCGAAGAACTTCGTGT+GGG | - | chr7_1:21397512-21397531 | Msa1013920:intron | 50.0% | |
| GAGAACCATATGGCATCACC+TGG | - | chr7_1:21397546-21397565 | Msa1013920:intron | 50.0% | |
| CGAGTTCCTTCCTGTACACA+TGG | - | chr7_1:21397757-21397776 | Msa1013920:intron | 50.0% | |
| !!! | ACAAGGGCTGGTGCTGATTT+TGG | - | chr7_1:21397917-21397936 | Msa1013920:intron | 50.0% |
| !! | TTTGGCTTGGTGAACAGTGC+AGG | - | chr7_1:21397935-21397954 | Msa1013920:intron | 50.0% |
| CAATTGCCGAGTCGTACAAG+TGG | - | chr7_1:21397972-21397991 | Msa1013920:intron | 50.0% | |
| GAGTCGTACAAGTGGTCCTA+TGG | - | chr7_1:21397980-21397999 | Msa1013920:intron | 50.0% | |
| TGTGAATGTTCCAGATGGGG+AGG | - | chr7_1:21398447-21398466 | Msa1013920:intron | 50.0% | |
| CTCCACTCATGTTAGCAGCA+AGG | - | chr7_1:21398476-21398495 | Msa1013920:intron | 50.0% | |
| TCCCTTGCTGCTAACATGAG+TGG | + | chr7_1:21398481-21398500 | None:intergenic | 50.0% | |
| CTCATGTTAGCAGCAAGGGA+AGG | - | chr7_1:21398481-21398500 | Msa1013920:intron | 50.0% | |
| CTTGCCCGTAAACTGGTACT+AGG | - | chr7_1:21398643-21398662 | Msa1013920:CDS | 50.0% | |
| ACCGCCTAGTACCAGTTTAC+GGG | + | chr7_1:21398650-21398669 | None:intergenic | 50.0% | |
| CACCGCCTAGTACCAGTTTA+CGG | + | chr7_1:21398651-21398670 | None:intergenic | 50.0% | |
| ACAGGTGATGCAGAAGAACC+TGG | - | chr7_1:21398841-21398860 | Msa1013920:CDS | 50.0% | |
| GTAAGCACCCTGAACATTCC+AGG | + | chr7_1:21398862-21398881 | None:intergenic | 50.0% | |
| ! | GGAGGTGCATTTCGTATGTG+AGG | - | chr7_1:21398894-21398913 | Msa1013920:five_prime_UTR | 50.0% |
| GTGCATTTCGTATGTGAGGG+AGG | - | chr7_1:21398898-21398917 | Msa1013920:five_prime_UTR | 50.0% | |
| GTCAGAAGCTGCCAAGCTTT+GGG | - | chr7_1:21398921-21398940 | Msa1013920:five_prime_UTR | 50.0% | |
| AATACCCCTCACCCAAAGCT+TGG | + | chr7_1:21398935-21398954 | None:intergenic | 50.0% | |
| AGATAGGTGAGCATGCGCCA+CGG | + | chr7_1:21393147-21393166 | None:intergenic | 55.0% | |
| ! | GTCATTGTTGGTGAGTGCGG+CGG | + | chr7_1:21393195-21393214 | None:intergenic | 55.0% |
| CTTCTACAAGCCTCCCACTC+CGG | - | chr7_1:21393273-21393292 | Msa1013920:CDS | 55.0% | |
| TAAGGACAGATCGCCGGAGT+GGG | + | chr7_1:21393289-21393308 | None:intergenic | 55.0% | |
| CTTCGTCATTGCTCGGATCG+CGG | - | chr7_1:21393517-21393536 | Msa1013920:CDS | 55.0% | |
| CTTCAGCAGCAAGAGGCTGA+GGG | + | chr7_1:21395091-21395110 | None:intergenic | 55.0% | |
| ACTTCAGCAGCAAGAGGCTG+AGG | + | chr7_1:21395092-21395111 | None:intergenic | 55.0% | |
| TTTGGGAGGCAGAGAAGTGG+CGG | - | chr7_1:21395281-21395300 | Msa1013920:intron | 55.0% | |
| !! | CGGTGGTGGCTTTGTGAAGA+AGG | - | chr7_1:21395301-21395320 | Msa1013920:intron | 55.0% |
| TGCTACAAGCCACCCTTTGG+TGG | + | chr7_1:21395535-21395554 | None:intergenic | 55.0% | |
| TATCAGCGCAGGACAAAGGC+AGG | - | chr7_1:21395619-21395638 | Msa1013920:CDS | 55.0% | |
| GGTCGGGACAACATGGTATG+GGG | + | chr7_1:21395771-21395790 | None:intergenic | 55.0% | |
| AACTACTGCAGCAGTGAGGG+AGG | - | chr7_1:21396273-21396292 | Msa1013920:intron | 55.0% | |
| ACTACTGCAGCAGTGAGGGA+GGG | - | chr7_1:21396274-21396293 | Msa1013920:intron | 55.0% | |
| GAGCTTCTTCACAAGCTGGC+TGG | + | chr7_1:21396342-21396361 | None:intergenic | 55.0% | |
| GCAAGTTACCATGGGCAAGC+AGG | - | chr7_1:21396370-21396389 | Msa1013920:intron | 55.0% | |
| AGGGTGTGGGGAATTGCTCA+TGG | - | chr7_1:21396390-21396409 | Msa1013920:intron | 55.0% | |
| GGGTGTGGGGAATTGCTCAT+GGG | - | chr7_1:21396391-21396410 | Msa1013920:intron | 55.0% | |
| TCTTGTGGCTGCATGCTGCA+GGG | - | chr7_1:21396450-21396469 | Msa1013920:intron | 55.0% | |
| TGGATGCAAGTGCGACAGAC+CGG | - | chr7_1:21396875-21396894 | Msa1013920:intron | 55.0% | |
| GAAGAACTTCGTGTGGGTGC+TGG | - | chr7_1:21397518-21397537 | Msa1013920:intron | 55.0% | |
| ! | GCTGGACTGGGAGAACCATA+TGG | - | chr7_1:21397536-21397555 | Msa1013920:intron | 55.0% |
| GCACACCAGGTGATGCCATA+TGG | + | chr7_1:21397554-21397573 | None:intergenic | 55.0% | |
| CAGCCTCGACATTGCCACAA+AGG | + | chr7_1:21397676-21397695 | None:intergenic | 55.0% | |
| GTGGCAATGTCGAGGCTGTT+AGG | - | chr7_1:21397678-21397697 | Msa1013920:intron | 55.0% | |
| AGGAAGGAACTCGGTCTTGC+TGG | + | chr7_1:21397750-21397769 | None:intergenic | 55.0% | |
| GAGACGCCATGTGTACAGGA+AGG | + | chr7_1:21397766-21397785 | None:intergenic | 55.0% | |
| AGACGAGACGCCATGTGTAC+AGG | + | chr7_1:21397770-21397789 | None:intergenic | 55.0% | |
| GTACACATGGCGTCTCGTCT+AGG | - | chr7_1:21397770-21397789 | Msa1013920:intron | 55.0% | |
| !!! | GGCTGGTGCTGATTTTGGCT+TGG | - | chr7_1:21397922-21397941 | Msa1013920:intron | 55.0% |
| CGACGAGCTGCACAGTGTAA+AGG | + | chr7_1:21398382-21398401 | None:intergenic | 55.0% | |
| TTACACTGTGCAGCTCGTCG+TGG | - | chr7_1:21398382-21398401 | Msa1013920:intron | 55.0% | |
| TGCAGCTCGTCGTGGTGATT+TGG | - | chr7_1:21398390-21398409 | Msa1013920:intron | 55.0% | |
| GCCCGTAAACTGGTACTAGG+CGG | - | chr7_1:21398646-21398665 | Msa1013920:CDS | 55.0% | |
| TTTGTTGGGGCCAGTCTAGC+AGG | - | chr7_1:21398752-21398771 | Msa1013920:CDS | 55.0% | |
| GCACGTTTCTCCTGCTAGAC+TGG | + | chr7_1:21398765-21398784 | None:intergenic | 55.0% | |
| TGTGCTGCGAGGCAGTGTTA+GGG | - | chr7_1:21398785-21398804 | Msa1013920:CDS | 55.0% | |
| GGTCAGAAGCTGCCAAGCTT+TGG | - | chr7_1:21398920-21398939 | Msa1013920:five_prime_UTR | 55.0% | |
| !! | AAGCTGCCAAGCTTTGGGTG+AGG | - | chr7_1:21398926-21398945 | Msa1013920:five_prime_UTR | 55.0% |
| !! | AGCTGCCAAGCTTTGGGTGA+GGG | - | chr7_1:21398927-21398946 | Msa1013920:five_prime_UTR | 55.0% |
| CGATTCTCGCGTTTCCTCCG+TGG | - | chr7_1:21393127-21393146 | Msa1013920:CDS | 60.0% | |
| ! | ATTGTTGGTGAGTGCGGCGG+TGG | + | chr7_1:21393192-21393211 | None:intergenic | 60.0% |
| CGGAGTGGGAGGCTTGTAGA+AGG | + | chr7_1:21393275-21393294 | None:intergenic | 60.0% | |
| CTAAGGACAGATCGCCGGAG+TGG | + | chr7_1:21393290-21393309 | None:intergenic | 60.0% | |
| ! | CCTGCGCTGATATCAGCGGT+TGG | + | chr7_1:21395611-21395630 | None:intergenic | 60.0% |
| CCAACCGCTGATATCAGCGC+AGG | - | chr7_1:21395608-21395627 | Msa1013920:CDS | 60.0% | |
| TACCATGGGCAAGCAGGGTG+TGG | - | chr7_1:21396376-21396395 | Msa1013920:intron | 60.0% | |
| ACCATGGGCAAGCAGGGTGT+GGG | - | chr7_1:21396377-21396396 | Msa1013920:intron | 60.0% | |
| CTCTTGTGGCTGCATGCTGC+AGG | - | chr7_1:21396449-21396468 | Msa1013920:intron | 60.0% | |
| CTTGTGGCTGCATGCTGCAG+GGG | - | chr7_1:21396451-21396470 | Msa1013920:intron | 60.0% | |
| TTGTGGCTGCATGCTGCAGG+GGG | - | chr7_1:21396452-21396471 | Msa1013920:intron | 60.0% | |
| CTGCAGGGGGTTTGTCGATG+TGG | - | chr7_1:21396465-21396484 | Msa1013920:intron | 60.0% | |
| GGATGCAAGTGCGACAGACC+GGG | - | chr7_1:21396876-21396895 | Msa1013920:intron | 60.0% | |
| !! | ACTTCGTGTGGGTGCTGGAC+TGG | - | chr7_1:21397523-21397542 | Msa1013920:intron | 60.0% |
| !! | CTTCGTGTGGGTGCTGGACT+GGG | - | chr7_1:21397524-21397543 | Msa1013920:intron | 60.0% |
| GGAGTGTAGTCCTCCCCATC+TGG | + | chr7_1:21398460-21398479 | None:intergenic | 60.0% | |
| GAGAAACGTGCTGTGCTGCG+AGG | - | chr7_1:21398774-21398793 | Msa1013920:CDS | 60.0% | |
| CTGTGCTGCGAGGCAGTGTT+AGG | - | chr7_1:21398784-21398803 | Msa1013920:CDS | 60.0% | |
| !! | GCTGCCAAGCTTTGGGTGAG+GGG | - | chr7_1:21398928-21398947 | Msa1013920:five_prime_UTR | 60.0% |
| TAGGTGAGCATGCGCCACGG+AGG | + | chr7_1:21393144-21393163 | None:intergenic | 65.0% | |
| ! | GGTGGTGGTGAAGGGAGTGG+TGG | + | chr7_1:21393174-21393193 | None:intergenic | 65.0% |
| ! | AGTGCGGCGGTGGTGGTGAA+GGG | + | chr7_1:21393182-21393201 | None:intergenic | 65.0% |
| AGGCAGAGAAGTGGCGGTGG+TGG | - | chr7_1:21395287-21395306 | Msa1013920:intron | 65.0% | |
| CCATGGGCAAGCAGGGTGTG+GGG | - | chr7_1:21396378-21396397 | Msa1013920:intron | 65.0% | |
| ! | GGCGGTGGTGGTGAAGGGAG+TGG | + | chr7_1:21393177-21393196 | None:intergenic | 70.0% |
| ! | GAGTGCGGCGGTGGTGGTGA+AGG | + | chr7_1:21393183-21393202 | None:intergenic | 70.0% |
| ! | GTTGGTGAGTGCGGCGGTGG+TGG | + | chr7_1:21393189-21393208 | None:intergenic | 70.0% |
| GGACAGATCGCCGGAGTGGG+AGG | + | chr7_1:21393286-21393305 | None:intergenic | 70.0% | |
| GCAGCAAGAGGCTGAGGGCG+AGG | + | chr7_1:21395086-21395105 | None:intergenic | 70.0% | |
| GGGAGGCAGAGAAGTGGCGG+TGG | - | chr7_1:21395284-21395303 | Msa1013920:intron | 70.0% | |
| CCCCACACCCTGCTTGCCCA+TGG | + | chr7_1:21396381-21396400 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 21393125 | 21398978 | 21393125 | ID=Msa1013920;Name=Msa1013920 |
| chr7_1 | mRNA | 21393125 | 21398978 | 21393125 | ID=Msa1013920-mRNA-1;Parent=Msa1013920;Name=Msa1013920-mRNA-1;_AED=0.09;_eAED=0.09;_QI=85|0.33|0.25|1|1|1|4|0|758 |
| chr7_1 | exon | 21393125 | 21394648 | 21393125 | ID=Msa1013920-mRNA-1:exon:5116;Parent=Msa1013920-mRNA-1 |
| chr7_1 | exon | 21395098 | 21395235 | 21395098 | ID=Msa1013920-mRNA-1:exon:5115;Parent=Msa1013920-mRNA-1 |
| chr7_1 | exon | 21395560 | 21395874 | 21395560 | ID=Msa1013920-mRNA-1:exon:5114;Parent=Msa1013920-mRNA-1 |
| chr7_1 | exon | 21398594 | 21398978 | 21398594 | ID=Msa1013920-mRNA-1:exon:5113;Parent=Msa1013920-mRNA-1 |
| chr7_1 | five_prime_UTR | 21398894 | 21398978 | 21398894 | ID=Msa1013920-mRNA-1:five_prime_utr;Parent=Msa1013920-mRNA-1 |
| chr7_1 | CDS | 21398594 | 21398893 | 21398594 | ID=Msa1013920-mRNA-1:cds;Parent=Msa1013920-mRNA-1 |
| chr7_1 | CDS | 21395560 | 21395874 | 21395560 | ID=Msa1013920-mRNA-1:cds;Parent=Msa1013920-mRNA-1 |
| chr7_1 | CDS | 21395098 | 21395235 | 21395098 | ID=Msa1013920-mRNA-1:cds;Parent=Msa1013920-mRNA-1 |
| chr7_1 | CDS | 21393125 | 21394648 | 21393125 | ID=Msa1013920-mRNA-1:cds;Parent=Msa1013920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
