Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1055180 | XP_003622205.1 | 97.852 | 745 | 15 | 1 | 1 | 744 | 1 | 745 | 0.0 | 1491 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1055180 | sp|O70511|ANK3_RAT | 25.039 | 639 | 362 | 19 | 25 | 620 | 250 | 814 | 1.80e-30 | 133 |
| Msa1055180 | sp|O70511|ANK3_RAT | 25.341 | 734 | 416 | 23 | 23 | 659 | 46 | 744 | 2.35e-24 | 113 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1055180 | G7L3C3 | 97.852 | 745 | 15 | 1 | 1 | 744 | 1 | 745 | 0.0 | 1491 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0735010 | Msa1055180 | 0.809585 | 1.759196e-50 | -8.615850e-47 |
| Msa1013920 | Msa1055180 | 0.842710 | 2.190391e-58 | -8.615850e-47 |
| Msa1038860 | Msa1055180 | 0.803270 | 3.776030e-49 | -8.615850e-47 |
| Msa1055180 | Msa1093580 | 0.819371 | 1.203102e-52 | -8.615850e-47 |
| Msa1055180 | Msa1438510 | 0.812048 | 5.156707e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1055180 | MtrunA17_Chr7g0226271 | 97.852 | 745 | 15 | 1 | 1 | 744 | 1 | 745 | 0.0 | 1491 |
| Msa1055180 | MtrunA17_Chr3g0122751 | 58.311 | 746 | 300 | 7 | 7 | 742 | 13 | 757 | 0.0 | 852 |
| Msa1055180 | MtrunA17_Chr4g0073161 | 28.740 | 254 | 135 | 8 | 436 | 646 | 40 | 290 | 1.10e-13 | 74.3 |
| Msa1055180 | MtrunA17_Chr6g0461061 | 24.430 | 307 | 165 | 7 | 366 | 614 | 170 | 467 | 3.64e-13 | 72.8 |
| Msa1055180 | MtrunA17_Chr3g0082141 | 26.048 | 334 | 191 | 9 | 303 | 621 | 513 | 805 | 3.69e-12 | 70.5 |
| Msa1055180 | MtrunA17_Chr1g0164551 | 25.904 | 332 | 193 | 7 | 303 | 621 | 76 | 367 | 6.22e-12 | 69.3 |
| Msa1055180 | MtrunA17_Chr5g0418551 | 32.836 | 134 | 84 | 2 | 488 | 617 | 65 | 196 | 1.41e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1055180 | AT5G14230.1 | 62.466 | 746 | 270 | 5 | 1 | 742 | 1 | 740 | 0.0 | 913 |
| Msa1055180 | AT5G14230.2 | 61.433 | 586 | 216 | 5 | 161 | 742 | 1 | 580 | 0.0 | 705 |
| Msa1055180 | AT5G13530.2 | 25.758 | 330 | 217 | 9 | 303 | 612 | 511 | 832 | 5.37e-13 | 73.6 |
| Msa1055180 | AT5G13530.1 | 25.378 | 331 | 218 | 9 | 303 | 612 | 511 | 833 | 1.36e-12 | 72.4 |
Find 196 sgRNAs with CRISPR-Local
Find 346 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGAGTTTGCGTTGAGTTTC+AGG | 0.118573 | 7_2:+28752410 | Msa1055180:CDS |
| ACTCAATGCCTAATTGATTT+TGG | 0.150305 | 7_2:+28755597 | Msa1055180:CDS |
| ACAAGGGCTGGTGCTGATTT+TGG | 0.171693 | 7_2:+28755708 | Msa1055180:CDS |
| CAAAGCCTCTGAAGAGCTTT+TGG | 0.229513 | 7_2:-28754045 | None:intergenic |
| AGTAGAAGTATTGCTGGATT+TGG | 0.255545 | 7_2:-28755838 | None:intergenic |
| TGTTGTCAGTTTGCTCCTTC+AGG | 0.273672 | 7_2:+28754775 | Msa1055180:CDS |
| CTCTTGTGGCTGCATGCTGC+AGG | 0.273850 | 7_2:+28754245 | Msa1055180:CDS |
| GGTCAGAAGCTGCTAAGCTT+TGG | 0.287071 | 7_2:+28756708 | Msa1055180:CDS |
| ATGTGCCGCGAGGCAGTGTT+AGG | 0.288967 | 7_2:+28756575 | Msa1055180:CDS |
| TTCTTCAGGTGTGCTTTGTT+GGG | 0.306841 | 7_2:+28756529 | Msa1055180:CDS |
| ACTTCGGTTTCGTAGTTTAC+TGG | 0.311637 | 7_2:-28752237 | None:intergenic |
| GCTCGACATTGCGTAGAAAT+AGG | 0.324872 | 7_2:+28756603 | Msa1055180:CDS |
| TTACGCATGTTGCGTTCTTC+AGG | 0.327414 | 7_2:+28756515 | Msa1055180:CDS |
| CTGGAAATGCTGAGCTTGTT+AGG | 0.333522 | 7_2:+28752475 | Msa1055180:CDS |
| ATTGCTGGATTTGGGTATCT+TGG | 0.335382 | 7_2:-28755829 | None:intergenic |
| TGGTGAAGGGAGTGGTGGTT+AGG | 0.337036 | 7_2:-28752163 | None:intergenic |
| TTGAAAACTGTCATTGAATC+TGG | 0.337466 | 7_2:+28755906 | Msa1055180:CDS |
| GAGTGCGGCGGCGGTGGTGA+AGG | 0.337972 | 7_2:-28752177 | None:intergenic |
| CAGAAGAACCTGGATTGTTC+AGG | 0.339711 | 7_2:+28756642 | Msa1055180:CDS |
| GTTCTTCAGGTGTGCTTTGT+TGG | 0.348684 | 7_2:+28756528 | Msa1055180:CDS |
| AATCACAACCAAAATCAATT+AGG | 0.356750 | 7_2:-28755605 | None:intergenic |
| GTAGAAGTATTGCTGGATTT+GGG | 0.356951 | 7_2:-28755837 | None:intergenic |
| GGAGTGGTGGTTAGGGACTT+AGG | 0.356985 | 7_2:-28752155 | None:intergenic |
| ACTTCGTGTGGGTGCTGGAC+TGG | 0.365888 | 7_2:+28755314 | Msa1055180:CDS |
| ATTCACATCAAAACCTTTGC+TGG | 0.367833 | 7_2:-28756222 | None:intergenic |
| GCTTGAATTTACACTTGAAA+AGG | 0.370781 | 7_2:+28756121 | Msa1055180:CDS |
| TGAGCTTGTTAGGAAGTTAC+TGG | 0.376528 | 7_2:+28752485 | Msa1055180:CDS |
| GTGGCAATGTCGAGGCTGTT+AGG | 0.384969 | 7_2:+28755469 | Msa1055180:CDS |
| TGCAGCTCGTCGTGGTGATT+TGG | 0.389340 | 7_2:+28756181 | Msa1055180:CDS |
| GAACTGTAATTTATTTGAAA+AGG | 0.390139 | 7_2:+28756094 | Msa1055180:CDS |
| CTACACCATGCTATCCTTTG+TGG | 0.401877 | 7_2:+28755450 | Msa1055180:CDS |
| CACCGCCTAGTACCAGTTTA+CGG | 0.403132 | 7_2:-28756439 | None:intergenic |
| AGATGAACTTGCCCGTAAAC+TGG | 0.403528 | 7_2:+28756427 | Msa1055180:CDS |
| GTCAGAAGCTGCTAAGCTTT+GGG | 0.405076 | 7_2:+28756709 | Msa1055180:CDS |
| GAAAAGGGTAATCAAAATAC+TGG | 0.416275 | 7_2:+28756137 | Msa1055180:CDS |
| ATTAGGCATTGAGTTATTGC+AGG | 0.416534 | 7_2:-28755588 | None:intergenic |
| AGCTTCTTCACAAGCTGGCT+GGG | 0.416665 | 7_2:-28754134 | None:intergenic |
| AGCTTGTGAAGAAGCTCTTC+TGG | 0.417060 | 7_2:+28754141 | Msa1055180:CDS |
| AGGAAGGAACTCGGTCTTGC+TGG | 0.420463 | 7_2:-28755538 | None:intergenic |
| CTTCGTGTGGGTGCTGGACT+GGG | 0.429796 | 7_2:+28755315 | Msa1055180:CDS |
| TTTGTTGGGGTCAGTCTAGC+AGG | 0.430897 | 7_2:+28756543 | Msa1055180:CDS |
| GTAAAGTTATGCAATAAATC+TGG | 0.432261 | 7_2:+28756038 | Msa1055180:CDS |
| TACCATGGGCAAGCAGGGTG+TGG | 0.435095 | 7_2:+28754172 | Msa1055180:CDS |
| GGAGTGTAGTCCTCCCCATC+TGG | 0.437604 | 7_2:-28756248 | None:intergenic |
| TTTCGATTGCTTGTATATGC+TGG | 0.439274 | 7_2:+28756008 | Msa1055180:CDS |
| GAGCTTCTTCACAAGCTGGC+TGG | 0.439752 | 7_2:-28754135 | None:intergenic |
| CAGGGTGCTTACTAAGAATA+GGG | 0.443038 | 7_2:+28756661 | Msa1055180:CDS |
| GGTGAAGGGAGTGGTGGTTA+GGG | 0.445053 | 7_2:-28752162 | None:intergenic |
| CTTGAATTTACACTTGAAAA+GGG | 0.446278 | 7_2:+28756122 | Msa1055180:CDS |
| TCAGGGTGCTTACTAAGAAT+AGG | 0.446524 | 7_2:+28756660 | Msa1055180:CDS |
| GTTTACTGGGAAAATCTGTT+TGG | 0.447674 | 7_2:-28752223 | None:intergenic |
| CTTGACTATCAAGATGATAG+TGG | 0.456936 | 7_2:+28755939 | Msa1055180:CDS |
| GAGTGGTGGTTAGGGACTTA+GGG | 0.457681 | 7_2:-28752154 | None:intergenic |
| GCAAGTTACCATGGGCAAGC+AGG | 0.458287 | 7_2:+28754166 | Msa1055180:CDS |
| CTTCGGTTTCGTAGTTTACT+GGG | 0.458349 | 7_2:-28752236 | None:intergenic |
| TCTTGTGGCTGCATGCTGCA+GGG | 0.459877 | 7_2:+28754246 | Msa1055180:CDS |
| CTTGAGACATTAATTAATGC+AGG | 0.461455 | 7_2:+28754106 | Msa1055180:CDS |
| AGTGCGGCGGCGGTGGTGAA+GGG | 0.464558 | 7_2:-28752176 | None:intergenic |
| TAGTTGCAGCTGTAGTTCAT+AGG | 0.467183 | 7_2:+28754744 | Msa1055180:CDS |
| GTGGAGAATACTGTCATTGT+TGG | 0.468123 | 7_2:-28752201 | None:intergenic |
| GGTGCATTTCGTATGTGAGG+GGG | 0.470458 | 7_2:+28756685 | Msa1055180:CDS |
| AACTATTTGAGACATGTTGC+AGG | 0.474097 | 7_2:-28755407 | None:intergenic |
| TTCTTGAAATGACAGAGTGT+TGG | 0.475631 | 7_2:+28754010 | Msa1055180:intron |
| TTTCTACGCAATGTCGAGCT+TGG | 0.481109 | 7_2:-28756599 | None:intergenic |
| GAAGAACTTCGTGTGGGTGC+TGG | 0.484007 | 7_2:+28755309 | Msa1055180:CDS |
| GCACACCAGGTGATGCCATA+TGG | 0.484590 | 7_2:-28755342 | None:intergenic |
| TCTGTTGATGTCAACTTCGC+CGG | 0.484593 | 7_2:+28752330 | Msa1055180:CDS |
| TGAAATTAAAAGCTTACAAA+GGG | 0.488174 | 7_2:-28756303 | None:intergenic |
| CGGAGTGAGAGGCTTCTAGA+AGG | 0.488523 | 7_2:-28752269 | None:intergenic |
| TGGTCATGGGATAATGCAAC+TGG | 0.491893 | 7_2:+28755285 | Msa1055180:CDS |
| GTACACATGGCGTCTCGTCT+AGG | 0.493808 | 7_2:+28755561 | Msa1055180:CDS |
| TACTGGGAAAATCTGTTTGG+TGG | 0.494305 | 7_2:-28752220 | None:intergenic |
| TTGTGGCTGCATGCTGCAGG+GGG | 0.494761 | 7_2:+28754248 | Msa1055180:CDS |
| GTTGGTGAGTGCGGCGGCGG+TGG | 0.496754 | 7_2:-28752183 | None:intergenic |
| TCCACATTTGTGTGGAGAGA+AGG | 0.496788 | 7_2:-28754710 | None:intergenic |
| ACCGCCTAGTACCAGTTTAC+GGG | 0.498041 | 7_2:-28756438 | None:intergenic |
| CACTGCTTGTTGAAAACCAT+GGG | 0.499105 | 7_2:-28755787 | None:intergenic |
| ACCATGGGCAAGCAGGGTGT+GGG | 0.499453 | 7_2:+28754173 | Msa1055180:CDS |
| AGACGAGACGCCATGTGTAC+AGG | 0.499544 | 7_2:-28755558 | None:intergenic |
| AGCTGCTAAGCTTTGGGTGA+GGG | 0.505228 | 7_2:+28756715 | Msa1055180:CDS |
| TTTGGCTTGGTGAACAGTGC+AGG | 0.509382 | 7_2:+28755726 | Msa1055180:CDS |
| CTTGCCCGTAAACTGGTACT+AGG | 0.513587 | 7_2:+28756434 | Msa1055180:CDS |
| CTTGTGGCTGCATGCTGCAG+GGG | 0.513819 | 7_2:+28754247 | Msa1055180:CDS |
| TAAGGCTTGGAGCATGGTCA+TGG | 0.514093 | 7_2:+28755271 | Msa1055180:CDS |
| TTGAACTCTCGAACAGACTC+TGG | 0.514187 | 7_2:+28755627 | Msa1055180:CDS |
| GCTGGACTGGGAGAACCATA+TGG | 0.517961 | 7_2:+28755327 | Msa1055180:CDS |
| TGTGGTTGAGACACTCATAA+AGG | 0.518135 | 7_2:+28754279 | Msa1055180:CDS |
| TAGAAGGCGTTGTGAGACTT+CGG | 0.519233 | 7_2:-28752253 | None:intergenic |
| CTTAGAATGTGGTGCTAATG+TGG | 0.519561 | 7_2:+28755497 | Msa1055180:CDS |
| TGCAGCTGTAGTTCATAGGC+AGG | 0.519700 | 7_2:+28754748 | Msa1055180:CDS |
| GTAAGCACCCTGAACAATCC+AGG | 0.520335 | 7_2:-28756650 | None:intergenic |
| TGCGTAATTGTTTCACATGT+GGG | 0.520699 | 7_2:-28756499 | None:intergenic |
| ACAGGTGATGCAGAAGAACC+TGG | 0.523891 | 7_2:+28756632 | Msa1055180:CDS |
| CTCAAAGTACTAACAAGGGC+TGG | 0.525330 | 7_2:+28755696 | Msa1055180:CDS |
| GGCGGCGGTGGTGAAGGGAG+TGG | 0.529613 | 7_2:-28752171 | None:intergenic |
| TCTTCAGGTGTGCTTTGTTG+GGG | 0.531305 | 7_2:+28756530 | Msa1055180:CDS |
| TGGATGCAAGTGCGACAGAC+CGG | 0.531424 | 7_2:+28754666 | Msa1055180:CDS |
| TCCACTCATGTTAGCAGCAA+GGG | 0.533090 | 7_2:+28756268 | Msa1055180:CDS |
| TCCCTTGCTGCTAACATGAG+TGG | 0.534250 | 7_2:-28756269 | None:intergenic |
| GTGCATTTCGTATGTGAGGG+GGG | 0.537706 | 7_2:+28756686 | Msa1055180:CDS |
| AGGTGCATTTCGTATGTGAG+GGG | 0.539200 | 7_2:+28756684 | Msa1055180:CDS |
| TTCTGGAGGCAAGTTACCAT+GGG | 0.540626 | 7_2:+28754158 | Msa1055180:CDS |
| ATTGTTGGTGAGTGCGGCGG+CGG | 0.542227 | 7_2:-28752186 | None:intergenic |
| AGAAGAGCTTCTTCACAAGC+TGG | 0.543401 | 7_2:-28754139 | None:intergenic |
| GTTCAGAAGCACACAAAATG+TGG | 0.545439 | 7_2:+28756467 | Msa1055180:CDS |
| AGAAGAACCTGGATTGTTCA+GGG | 0.545678 | 7_2:+28756643 | Msa1055180:CDS |
| ATGCGTAATTGTTTCACATG+TGG | 0.551447 | 7_2:-28756500 | None:intergenic |
| AAAATACTCAACTGCACACC+AGG | 0.552182 | 7_2:-28755355 | None:intergenic |
| AACTACTGCAGCCGTGAGGG+AGG | 0.554383 | 7_2:+28754069 | Msa1055180:CDS |
| TGTGCCGCGAGGCAGTGTTA+GGG | 0.554822 | 7_2:+28756576 | Msa1055180:CDS |
| GCCTTCTCTCCACACAAATG+TGG | 0.555992 | 7_2:+28754709 | Msa1055180:CDS |
| CTTCTGGAGGCAAGTTACCA+TGG | 0.556076 | 7_2:+28754157 | Msa1055180:CDS |
| CTACTTGCAAGGAAATTCGC+AGG | 0.556635 | 7_2:+28756374 | Msa1055180:CDS |
| AAGCTGCTAAGCTTTGGGTG+AGG | 0.556926 | 7_2:+28756714 | Msa1055180:CDS |
| ATCAAGATGGCCCTCCCTCA+CGG | 0.557424 | 7_2:-28754080 | None:intergenic |
| TTGAAGTAAGGCTTGGAGCA+TGG | 0.558223 | 7_2:+28755265 | Msa1055180:CDS |
| CCATGGGCAAGCAGGGTGTG+GGG | 0.560261 | 7_2:+28754174 | Msa1055180:CDS |
| GCTGCTAAGCTTTGGGTGAG+GGG | 0.561273 | 7_2:+28756716 | Msa1055180:CDS |
| GAGGTGCATTTCGTATGTGA+GGG | 0.563987 | 7_2:+28756683 | Msa1055180:CDS |
| GGACAGATCGCCGGAGTGAG+AGG | 0.568963 | 7_2:-28752280 | None:intergenic |
| GTTACATTGCTGACCAGCAA+AGG | 0.569092 | 7_2:+28756209 | Msa1055180:CDS |
| CAAGTTACCATGGGCAAGCA+GGG | 0.574424 | 7_2:+28754167 | Msa1055180:CDS |
| ACTACTGCAGCCGTGAGGGA+GGG | 0.574971 | 7_2:+28754070 | Msa1055180:CDS |
| ATGAAATTAAAAGCTTACAA+AGG | 0.575942 | 7_2:-28756304 | None:intergenic |
| GTTGACATCAACAGAAGGAT+CGG | 0.578074 | 7_2:-28752322 | None:intergenic |
| CCCCACACCCTGCTTGCCCA+TGG | 0.578239 | 7_2:-28754174 | None:intergenic |
| CAGCCTCGACATTGCCACAA+AGG | 0.578878 | 7_2:-28755464 | None:intergenic |
| TGCAACTACTGCAGCCGTGA+GGG | 0.579048 | 7_2:+28754066 | Msa1055180:CDS |
| GGAGATGCAGTGAAAGGCTA+AGG | 0.579580 | 7_2:-28752301 | None:intergenic |
| TTGATGTGAATGTTCCAGAT+GGG | 0.580176 | 7_2:+28756234 | Msa1055180:CDS |
| CTTCTAGAAGCCTCTCACTC+CGG | 0.580638 | 7_2:+28752270 | Msa1055180:CDS |
| AAACTGCACTTCTACTTGCA+AGG | 0.582642 | 7_2:+28756363 | Msa1055180:CDS |
| GAGTCGTACAAGTGGTCCCA+TGG | 0.584857 | 7_2:+28755771 | Msa1055180:CDS |
| TTCAGAAGCACACAAAATGT+GGG | 0.586232 | 7_2:+28756468 | Msa1055180:CDS |
| TTTATTGCATAACTTTACAT+CGG | 0.586946 | 7_2:-28756033 | None:intergenic |
| AAGGCTTGGAGCATGGTCAT+GGG | 0.588256 | 7_2:+28755272 | Msa1055180:CDS |
| CGAGTTCCTTCCTGTACACA+TGG | 0.588613 | 7_2:+28755548 | Msa1055180:CDS |
| GGAGGTGCATTTCGTATGTG+AGG | 0.592475 | 7_2:+28756682 | Msa1055180:CDS |
| GTCTCAAATAGTTGTCATTG+TGG | 0.592574 | 7_2:+28755417 | Msa1055180:CDS |
| GGCGGTGGTGAAGGGAGTGG+TGG | 0.594533 | 7_2:-28752168 | None:intergenic |
| AAGCACACAAAATGTGGGAA+GGG | 0.595132 | 7_2:+28756473 | Msa1055180:CDS |
| ACTGTCATTGTTGGTGAGTG+CGG | 0.596472 | 7_2:-28752192 | None:intergenic |
| TGCATTTCGTATGTGAGGGG+GGG | 0.598096 | 7_2:+28756687 | Msa1055180:CDS |
| GAAGCACACAAAATGTGGGA+AGG | 0.598612 | 7_2:+28756472 | Msa1055180:CDS |
| AAAGCTTACAAAGGGATGCA+TGG | 0.599357 | 7_2:-28756295 | None:intergenic |
| ACTCTTCAAACTAACCGCTC+CGG | 0.600978 | 7_2:-28752349 | None:intergenic |
| TTGTGCAAAATATAAACAAG+AGG | 0.605272 | 7_2:+28755668 | Msa1055180:CDS |
| CGTGTACAGCAATATGCGGT+CGG | 0.607583 | 7_2:-28754222 | None:intergenic |
| CATTACAATCCACATTTGTG+TGG | 0.611859 | 7_2:-28754718 | None:intergenic |
| GGATGCAAGTGCGACAGACC+GGG | 0.612407 | 7_2:+28754667 | Msa1055180:CDS |
| CATGTGTACAGGAAGGAACT+CGG | 0.612747 | 7_2:-28755547 | None:intergenic |
| AGGATCGGAGATGCAGTGAA+AGG | 0.613374 | 7_2:-28752307 | None:intergenic |
| CATTGCCACAAAGGATAGCA+TGG | 0.613821 | 7_2:-28755455 | None:intergenic |
| AAAGGCTAAGGACAGATCGC+CGG | 0.614312 | 7_2:-28752289 | None:intergenic |
| GAGAACCATATGGCATCACC+TGG | 0.618277 | 7_2:+28755337 | Msa1055180:CDS |
| TTGCAAGGAAATTCGCAGGA+GGG | 0.618536 | 7_2:+28756378 | Msa1055180:CDS |
| CTCCACTCATGTTAGCAGCA+AGG | 0.618965 | 7_2:+28756267 | Msa1055180:CDS |
| TGATGTGAATGTTCCAGATG+GGG | 0.620066 | 7_2:+28756235 | Msa1055180:CDS |
| ATGTCTCAAGAATATCAAGA+TGG | 0.623238 | 7_2:-28754093 | None:intergenic |
| AGTGTCTCAAAGTACTAACA+AGG | 0.623722 | 7_2:+28755691 | Msa1055180:CDS |
| AAGGGTAATCAAAATACTGG+TGG | 0.624841 | 7_2:+28756140 | Msa1055180:CDS |
| TTTGATGTGAATGTTCCAGA+TGG | 0.625886 | 7_2:+28756233 | Msa1055180:CDS |
| GTAAACCAAAAGCTCTTCAG+AGG | 0.628315 | 7_2:+28754040 | Msa1055180:CDS |
| TATTGCTGTACACGCTCTTG+TGG | 0.628876 | 7_2:+28754231 | Msa1055180:CDS |
| CCACTGCTTGTTGAAAACCA+TGG | 0.630025 | 7_2:-28755788 | None:intergenic |
| GAAGGAGCAAACTGACAACA+TGG | 0.634842 | 7_2:-28754772 | None:intergenic |
| TAAGTGACTGTAAAAGCACC+CGG | 0.636325 | 7_2:-28754685 | None:intergenic |
| GCTATGCATACAGCTATGAA+AGG | 0.641849 | 7_2:+28755972 | Msa1055180:CDS |
| GTTAGGATACTCTTAGAATG+TGG | 0.643303 | 7_2:+28755486 | Msa1055180:CDS |
| CTCATGTTAGCAGCAAGGGA+AGG | 0.644540 | 7_2:+28756272 | Msa1055180:CDS |
| TCGATTCTCGCGTTCCTCCG+TGG | 0.644821 | 7_2:+28752121 | Msa1055180:five_prime_UTR |
| GCGAAGTTGACATCAACAGA+AGG | 0.645408 | 7_2:-28752327 | None:intergenic |
| CTTAGGGTGAGCATGCGCCA+CGG | 0.645896 | 7_2:-28752138 | None:intergenic |
| ATGGGACCACTTGTACGACT+CGG | 0.649930 | 7_2:-28755769 | None:intergenic |
| TGATGTCAACTTCGCCGGAG+CGG | 0.651013 | 7_2:+28752335 | Msa1055180:CDS |
| CAATTGCCGAGTCGTACAAG+TGG | 0.652112 | 7_2:+28755763 | Msa1055180:CDS |
| TATCCTTTGTGGCAATGTCG+AGG | 0.654180 | 7_2:+28755461 | Msa1055180:CDS |
| GGTATTAAACTTGTAACGAG+AGG | 0.654806 | 7_2:+28756737 | Msa1055180:CDS |
| TTACACTGTGCAGCTCGTCG+TGG | 0.660221 | 7_2:+28756173 | Msa1055180:CDS |
| ACTACAGAATGGTGCTACGA+CGG | 0.661827 | 7_2:+28755239 | Msa1055180:intron |
| TTGCAACTACTGCAGCCGTG+AGG | 0.662700 | 7_2:+28754065 | Msa1055180:CDS |
| CGTAGAAATAGGCACAACAC+AGG | 0.667404 | 7_2:+28756614 | Msa1055180:CDS |
| AACTGGCGAAGAACTTCGTG+TGG | 0.670473 | 7_2:+28755302 | Msa1055180:CDS |
| GTCATTGTTGGTGAGTGCGG+CGG | 0.673805 | 7_2:-28752189 | None:intergenic |
| TTGTGAAGAAGCTCTTCTGG+AGG | 0.676266 | 7_2:+28754144 | Msa1055180:CDS |
| CTTGCAAGGAAATTCGCAGG+AGG | 0.677926 | 7_2:+28756377 | Msa1055180:CDS |
| GAGACGCCATGTGTACAGGA+AGG | 0.685160 | 7_2:-28755554 | None:intergenic |
| TGTGAATGTTCCAGATGGGG+AGG | 0.702989 | 7_2:+28756238 | Msa1055180:CDS |
| GTGTCTCAAAGTACTAACAA+GGG | 0.718421 | 7_2:+28755692 | Msa1055180:CDS |
| GGTGCTTACTAAGAATAGGG+AGG | 0.722228 | 7_2:+28756664 | Msa1055180:CDS |
| AGATGATAGTGGTTTCTCAG+CGG | 0.723493 | 7_2:+28755950 | Msa1055180:CDS |
| TTGGCCCTAACACTGCCTCG+CGG | 0.730328 | 7_2:-28756580 | None:intergenic |
| ACTGGCGAAGAACTTCGTGT+GGG | 0.731967 | 7_2:+28755303 | Msa1055180:CDS |
| AGGGTGAGCATGCGCCACGG+AGG | 0.733369 | 7_2:-28752135 | None:intergenic |
| AGAGCGTGTACAGCAATATG+CGG | 0.733686 | 7_2:-28754226 | None:intergenic |
| GCCCGTAAACTGGTACTAGG+CGG | 0.752401 | 7_2:+28756437 | Msa1055180:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATGTGTTTTTTTTTTTTTA+AGG | + | chr7_2:28753074-28753093 | Msa1055180:intron | 10.0% |
| !!! | AAAAAACACATTTTGAATTA+CGG | - | chr7_2:28753066-28753085 | None:intergenic | 15.0% |
| !!! | TTTTAAGGAAAATTTCAAAA+TGG | + | chr7_2:28753089-28753108 | Msa1055180:intron | 15.0% |
| !!! | AACCAAAAAAATTGTTATTT+TGG | - | chr7_2:28753557-28753576 | None:intergenic | 15.0% |
| !!! | TCATATTTCTTATTTTATGT+AGG | - | chr7_2:28753713-28753732 | None:intergenic | 15.0% |
| !! | ATGAAATAAAAATCTCTTAT+TGG | + | chr7_2:28753729-28753748 | Msa1055180:intron | 15.0% |
| !!! | ACTAGTTTCATAATATTATT+AGG | - | chr7_2:28754484-28754503 | None:intergenic | 15.0% |
| !!! | TATTTGTAGTTTTTAACTTA+CGG | + | chr7_2:28754580-28754599 | Msa1055180:intron | 15.0% |
| !!! | TTCAATTTCAACTGTTTTAT+TGG | + | chr7_2:28752548-28752567 | Msa1055180:intron | 20.0% |
| !!! | CTATTTGTTTTGAAAAATGA+TGG | + | chr7_2:28752619-28752638 | Msa1055180:intron | 20.0% |
| !!! | ACTTTTACTTTATGTTGATT+TGG | + | chr7_2:28753233-28753252 | Msa1055180:intron | 20.0% |
| !!! | GAATTTTTTAGCCATAAAAA+AGG | - | chr7_2:28753278-28753297 | None:intergenic | 20.0% |
| !! | AGAAAAATGTATTGTCAAAA+GGG | - | chr7_2:28753330-28753349 | None:intergenic | 20.0% |
| !! | TAGAAAAATGTATTGTCAAA+AGG | - | chr7_2:28753331-28753350 | None:intergenic | 20.0% |
| !! | AAAATGAATTGCAAAGAAAA+TGG | + | chr7_2:28753400-28753419 | Msa1055180:intron | 20.0% |
| !!! | GTCCAAAATAACAATTTTTT+TGG | + | chr7_2:28753552-28753571 | Msa1055180:intron | 20.0% |
| !! | CATTATATGTTTATGTTCAA+TGG | - | chr7_2:28753641-28753660 | None:intergenic | 20.0% |
| !!! | ATTTCTTATTTTATGTAGGT+GGG | - | chr7_2:28753709-28753728 | None:intergenic | 20.0% |
| !!! | TATTTCTTATTTTATGTAGG+TGG | - | chr7_2:28753710-28753729 | None:intergenic | 20.0% |
| !! | AAGTAAATCAGAAGATTAAA+GGG | - | chr7_2:28753763-28753782 | None:intergenic | 20.0% |
| !! | AAAGTAAATCAGAAGATTAA+AGG | - | chr7_2:28753764-28753783 | None:intergenic | 20.0% |
| !! | TTAATCTTCTGATTTACTTT+AGG | + | chr7_2:28753764-28753783 | Msa1055180:intron | 20.0% |
| !!! | TGATTATAGAGATTTTGTAA+TGG | + | chr7_2:28754321-28754340 | Msa1055180:intron | 20.0% |
| !! | TAATATTATTAGGAGATGTT+GGG | - | chr7_2:28754474-28754493 | None:intergenic | 20.0% |
| !! | ATAATATTATTAGGAGATGT+TGG | - | chr7_2:28754475-28754494 | None:intergenic | 20.0% |
| !! | TTTATTGCATAACTTTACAT+CGG | - | chr7_2:28756036-28756055 | None:intergenic | 20.0% |
| !! | GAACTGTAATTTATTTGAAA+AGG | + | chr7_2:28756094-28756113 | Msa1055180:CDS | 20.0% |
| !! | TGAAATTAAAAGCTTACAAA+GGG | - | chr7_2:28756306-28756325 | None:intergenic | 20.0% |
| !! | ATGAAATTAAAAGCTTACAA+AGG | - | chr7_2:28756307-28756326 | None:intergenic | 20.0% |
| !!! | TGTAAGCTTTTAATTTCATA+CGG | + | chr7_2:28756308-28756327 | Msa1055180:CDS | 20.0% |
| !!! | TCTAATGCTTTTGGTTTTTT+TGG | + | chr7_2:28752703-28752722 | Msa1055180:intron | 25.0% |
| ! | GATAATCTCAATAAATCACT+TGG | - | chr7_2:28752931-28752950 | None:intergenic | 25.0% |
| !! | TAAGAGTGAATAGTTTTTCA+AGG | + | chr7_2:28753011-28753030 | Msa1055180:intron | 25.0% |
| ! | GAATTTCATCTTCAAAGTAA+CGG | + | chr7_2:28753132-28753151 | Msa1055180:intron | 25.0% |
| ! | AATTTCATCTTCAAAGTAAC+GGG | + | chr7_2:28753133-28753152 | Msa1055180:intron | 25.0% |
| !!! | TCACTTTTTCTCCTTTTTTA+TGG | + | chr7_2:28753264-28753283 | Msa1055180:intron | 25.0% |
| ! | GAAAAATGTATTGTCAAAAG+GGG | - | chr7_2:28753329-28753348 | None:intergenic | 25.0% |
| ! | AAATAATACACTCAACAATC+AGG | - | chr7_2:28753482-28753501 | None:intergenic | 25.0% |
| !! | GATTGTTGAGTGTATTATTT+TGG | + | chr7_2:28753482-28753501 | Msa1055180:intron | 25.0% |
| !!! | TGTATTATTTTGGTTGCATT+AGG | + | chr7_2:28753492-28753511 | Msa1055180:intron | 25.0% |
| !! | GTTTGCTACTAAAAACAAAA+AGG | - | chr7_2:28753581-28753600 | None:intergenic | 25.0% |
| ! | ATATGTTTATGTTCAATGGT+CGG | - | chr7_2:28753637-28753656 | None:intergenic | 25.0% |
| !!! | TTTCTTATTTTATGTAGGTG+GGG | - | chr7_2:28753708-28753727 | None:intergenic | 25.0% |
| !!! | TCCACTTTATTTCTATATCA+TGG | + | chr7_2:28753806-28753825 | Msa1055180:intron | 25.0% |
| ! | ACCATGATATAGAAATAAAG+TGG | - | chr7_2:28753810-28753829 | None:intergenic | 25.0% |
| !!! | ACTTTATTTCTATATCATGG+TGG | + | chr7_2:28753809-28753828 | Msa1055180:intron | 25.0% |
| !!! | CTTTATTTCTATATCATGGT+GGG | + | chr7_2:28753810-28753829 | Msa1055180:intron | 25.0% |
| ! | TATTACTCCAAGTTATTAAC+TGG | + | chr7_2:28753980-28753999 | Msa1055180:intron | 25.0% |
| ! | AAATCAACCAGTTAATAACT+TGG | - | chr7_2:28753990-28754009 | None:intergenic | 25.0% |
| ! | AATATTATTAGGAGATGTTG+GGG | - | chr7_2:28754473-28754492 | None:intergenic | 25.0% |
| ! | TGAAAGCTAAATAATACTCA+AGG | - | chr7_2:28754511-28754530 | None:intergenic | 25.0% |
| !! | CATGTTTATTTAGAATCCTA+TGG | - | chr7_2:28754538-28754557 | None:intergenic | 25.0% |
| !!! | AGTTTTTAACTTACGGTTAT+TGG | + | chr7_2:28754587-28754606 | Msa1055180:intron | 25.0% |
| !!! | AATTTGAGATCGTTTTTCAA+TGG | + | chr7_2:28754633-28754652 | Msa1055180:intron | 25.0% |
| ! | TTAAACACTAACAATGAAGT+AGG | - | chr7_2:28755103-28755122 | None:intergenic | 25.0% |
| ! | TTTACAAATGAACTACAGAA+TGG | + | chr7_2:28755228-28755247 | Msa1055180:intron | 25.0% |
| !!! | GTTGAGTATTTTGAAAAAAG+TGG | + | chr7_2:28755366-28755385 | Msa1055180:CDS | 25.0% |
| ! | AATCACAACCAAAATCAATT+AGG | - | chr7_2:28755608-28755627 | None:intergenic | 25.0% |
| ! | TTGTGCAAAATATAAACAAG+AGG | + | chr7_2:28755668-28755687 | Msa1055180:CDS | 25.0% |
| ! | CTTAGATACAAAAATCAAAG+GGG | - | chr7_2:28755868-28755887 | None:intergenic | 25.0% |
| ! | CCTTAGATACAAAAATCAAA+GGG | - | chr7_2:28755869-28755888 | None:intergenic | 25.0% |
| ! | GTAAAGTTATGCAATAAATC+TGG | + | chr7_2:28756038-28756057 | Msa1055180:CDS | 25.0% |
| ! | CTTGAATTTACACTTGAAAA+GGG | + | chr7_2:28756122-28756141 | Msa1055180:CDS | 25.0% |
| AAACAGTTGAAATTGAAGCA+CGG | - | chr7_2:28752545-28752564 | None:intergenic | 30.0% | |
| !!! | TTTTGTTGTTGTTGTTGTTG+TGG | + | chr7_2:28752573-28752592 | Msa1055180:intron | 30.0% |
| ! | TGCAATTCTTCTAATGCTTT+TGG | + | chr7_2:28752694-28752713 | Msa1055180:intron | 30.0% |
| AATTGAAGATGTTTAGTGTC+CGG | + | chr7_2:28752872-28752891 | Msa1055180:intron | 30.0% | |
| ! | TTTTGAATTACGGATACGTT+TGG | - | chr7_2:28753056-28753075 | None:intergenic | 30.0% |
| ATTTCATCTTCAAAGTAACG+GGG | + | chr7_2:28753134-28753153 | Msa1055180:intron | 30.0% | |
| AAAAGGAGAAAAAGTGAAGT+GGG | - | chr7_2:28753261-28753280 | None:intergenic | 30.0% | |
| AAAAAGGAGAAAAAGTGAAG+TGG | - | chr7_2:28753262-28753281 | None:intergenic | 30.0% | |
| ! | CTTGCTTTAGATATAGAAGT+AGG | - | chr7_2:28753361-28753380 | None:intergenic | 30.0% |
| ! | CTACTTCTATATCTAAAGCA+AGG | + | chr7_2:28753359-28753378 | Msa1055180:intron | 30.0% |
| TATGTTTATGTTCAATGGTC+GGG | - | chr7_2:28753636-28753655 | None:intergenic | 30.0% | |
| ATCTTCTGATTTACTTTAGG+TGG | + | chr7_2:28753767-28753786 | Msa1055180:intron | 30.0% | |
| ! | CTGTAACTTTTGCAAAATCA+CGG | + | chr7_2:28753880-28753899 | Msa1055180:intron | 30.0% |
| ATGTCTCAAGAATATCAAGA+TGG | - | chr7_2:28754096-28754115 | None:intergenic | 30.0% | |
| CTTGAGACATTAATTAATGC+AGG | + | chr7_2:28754106-28754125 | Msa1055180:CDS | 30.0% | |
| AAAACAATTTCAGATGCTTC+TGG | - | chr7_2:28754369-28754388 | None:intergenic | 30.0% | |
| !! | ATTGTTTTGTCCCTATTATC+TGG | + | chr7_2:28754381-28754400 | Msa1055180:intron | 30.0% |
| TCTTAATGTGCCAGATAATA+GGG | - | chr7_2:28754394-28754413 | None:intergenic | 30.0% | |
| TTCTTAATGTGCCAGATAAT+AGG | - | chr7_2:28754395-28754414 | None:intergenic | 30.0% | |
| CTAGAAAGAAGACAATATCA+TGG | - | chr7_2:28754425-28754444 | None:intergenic | 30.0% | |
| TGATATTGTCTTCTTTCTAG+AGG | + | chr7_2:28754425-28754444 | Msa1055180:intron | 30.0% | |
| ATATTATTAGGAGATGTTGG+GGG | - | chr7_2:28754472-28754491 | None:intergenic | 30.0% | |
| ! | GTTTATTTAGAATCCTATGG+AGG | - | chr7_2:28754535-28754554 | None:intergenic | 30.0% |
| ACAAATAATAAGCTGAGTAC+TGG | - | chr7_2:28754567-28754586 | None:intergenic | 30.0% | |
| ! | ATATATTGGCTGTAACAACT+AGG | - | chr7_2:28754882-28754901 | None:intergenic | 30.0% |
| TTGCAAAAGCAAGGATATAT+TGG | - | chr7_2:28754896-28754915 | None:intergenic | 30.0% | |
| AATGGAAAATTGCAAAAGCA+AGG | - | chr7_2:28754905-28754924 | None:intergenic | 30.0% | |
| ATGTAACAGTAGTTCACAAA+TGG | - | chr7_2:28754923-28754942 | None:intergenic | 30.0% | |
| TGACCTCAACTTATTAAAAC+TGG | + | chr7_2:28755020-28755039 | Msa1055180:intron | 30.0% | |
| !! | TCTCCAGTTTTAATAAGTTG+AGG | - | chr7_2:28755026-28755045 | None:intergenic | 30.0% |
| ACTAACAATGAAGTAGGAAT+CGG | - | chr7_2:28755097-28755116 | None:intergenic | 30.0% | |
| AAGAAAAAAAAAACCTAGCG+AGG | - | chr7_2:28755209-28755228 | None:intergenic | 30.0% | |
| !! | ACTCAATGCCTAATTGATTT+TGG | + | chr7_2:28755597-28755616 | Msa1055180:CDS | 30.0% |
| ! | TTTTGCACAAATCATCAAAG+CGG | - | chr7_2:28755658-28755677 | None:intergenic | 30.0% |
| !! | CCCTTTGATTTTTGTATCTA+AGG | + | chr7_2:28755866-28755885 | Msa1055180:CDS | 30.0% |
| GCCTTAGATACAAAAATCAA+AGG | - | chr7_2:28755870-28755889 | None:intergenic | 30.0% | |
| !! | TTGATTTTTGTATCTAAGGC+AGG | + | chr7_2:28755870-28755889 | Msa1055180:CDS | 30.0% |
| TTGAAAACTGTCATTGAATC+TGG | + | chr7_2:28755906-28755925 | Msa1055180:CDS | 30.0% | |
| GCTTGAATTTACACTTGAAA+AGG | + | chr7_2:28756121-28756140 | Msa1055180:CDS | 30.0% | |
| GAAAAGGGTAATCAAAATAC+TGG | + | chr7_2:28756137-28756156 | Msa1055180:CDS | 30.0% | |
| TGTAATGCTAAAAATGCAAG+AGG | + | chr7_2:28756338-28756357 | Msa1055180:CDS | 30.0% | |
| GTTTACTGGGAAAATCTGTT+TGG | - | chr7_2:28752226-28752245 | None:intergenic | 35.0% | |
| AAATCCATCAATAAACGCGA+AGG | - | chr7_2:28753202-28753221 | None:intergenic | 35.0% | |
| AAAGGAGAAAAAGTGAAGTG+GGG | - | chr7_2:28753260-28753279 | None:intergenic | 35.0% | |
| GGGGACATATAATAATGTGA+AGG | - | chr7_2:28753310-28753329 | None:intergenic | 35.0% | |
| TGCATTATGCATCACTCTTT+AGG | + | chr7_2:28753682-28753701 | Msa1055180:intron | 35.0% | |
| ! | TAGCTTTTGCAAAATTACGC+TGG | - | chr7_2:28753856-28753875 | None:intergenic | 35.0% |
| TTCTTGAAATGACAGAGTGT+TGG | + | chr7_2:28754010-28754029 | Msa1055180:intron | 35.0% | |
| TATCTGGCACATTAAGAAGT+TGG | + | chr7_2:28754397-28754416 | Msa1055180:intron | 35.0% | |
| ATCTGGCACATTAAGAAGTT+GGG | + | chr7_2:28754398-28754417 | Msa1055180:intron | 35.0% | |
| !! | ATTTAGCTTTCATCCTCCAT+AGG | + | chr7_2:28754519-28754538 | Msa1055180:intron | 35.0% |
| TACGGTTATTGGTAAATACG+TGG | + | chr7_2:28754598-28754617 | Msa1055180:intron | 35.0% | |
| CATTACAATCCACATTTGTG+TGG | - | chr7_2:28754721-28754740 | None:intergenic | 35.0% | |
| TAAGAGAAACGTTTACCTGA+AGG | - | chr7_2:28754793-28754812 | None:intergenic | 35.0% | |
| CTAACTGAACTGGTAATCAA+AGG | - | chr7_2:28754827-28754846 | None:intergenic | 35.0% | |
| CTTTGATTACCAGTTCAGTT+AGG | + | chr7_2:28754825-28754844 | Msa1055180:intron | 35.0% | |
| TCTTGTTAACCTAACTGAAC+TGG | - | chr7_2:28754837-28754856 | None:intergenic | 35.0% | |
| GTGATTCATTATCGCTTGAT+GGG | - | chr7_2:28754981-28755000 | None:intergenic | 35.0% | |
| TGTGATTCATTATCGCTTGA+TGG | - | chr7_2:28754982-28755001 | None:intergenic | 35.0% | |
| !! | ATTTTGTTATCAGTCTGCCA+AGG | + | chr7_2:28755045-28755064 | Msa1055180:intron | 35.0% |
| CCTAACATCATTAAAAGAGG+TGG | - | chr7_2:28755074-28755093 | None:intergenic | 35.0% | |
| ! | CCACCTCTTTTAATGATGTT+AGG | + | chr7_2:28755071-28755090 | Msa1055180:intron | 35.0% |
| !! | TGATTAGTTAGCTCTGTTGA+TGG | + | chr7_2:28755127-28755146 | Msa1055180:intron | 35.0% |
| !! | TCTGTTGATGGTCTCATAAT+TGG | + | chr7_2:28755139-28755158 | Msa1055180:intron | 35.0% |
| ! | CAACTAGAAATGATAGTGAG+AGG | - | chr7_2:28755171-28755190 | None:intergenic | 35.0% |
| !!! | AATTTTAACTGATCCTCGCT+AGG | + | chr7_2:28755193-28755212 | Msa1055180:intron | 35.0% |
| ! | AACTATTTGAGACATGTTGC+AGG | - | chr7_2:28755410-28755429 | None:intergenic | 35.0% |
| GTCTCAAATAGTTGTCATTG+TGG | + | chr7_2:28755417-28755436 | Msa1055180:CDS | 35.0% | |
| GTTAGGATACTCTTAGAATG+TGG | + | chr7_2:28755486-28755505 | Msa1055180:CDS | 35.0% | |
| !! | ATTAGGCATTGAGTTATTGC+AGG | - | chr7_2:28755591-28755610 | None:intergenic | 35.0% |
| ! | AGTGTCTCAAAGTACTAACA+AGG | + | chr7_2:28755691-28755710 | Msa1055180:CDS | 35.0% |
| ! | GTGTCTCAAAGTACTAACAA+GGG | + | chr7_2:28755692-28755711 | Msa1055180:CDS | 35.0% |
| !! | GTAGAAGTATTGCTGGATTT+GGG | - | chr7_2:28755840-28755859 | None:intergenic | 35.0% |
| !! | AGTAGAAGTATTGCTGGATT+TGG | - | chr7_2:28755841-28755860 | None:intergenic | 35.0% |
| !! | GGAAAAAGTAGAAGTATTGC+TGG | - | chr7_2:28755847-28755866 | None:intergenic | 35.0% |
| CTTGACTATCAAGATGATAG+TGG | + | chr7_2:28755939-28755958 | Msa1055180:CDS | 35.0% | |
| TTTCGATTGCTTGTATATGC+TGG | + | chr7_2:28756008-28756027 | Msa1055180:CDS | 35.0% | |
| AAGGGTAATCAAAATACTGG+TGG | + | chr7_2:28756140-28756159 | Msa1055180:CDS | 35.0% | |
| ATTCACATCAAAACCTTTGC+TGG | - | chr7_2:28756225-28756244 | None:intergenic | 35.0% | |
| TTTGATGTGAATGTTCCAGA+TGG | + | chr7_2:28756233-28756252 | Msa1055180:CDS | 35.0% | |
| TTGATGTGAATGTTCCAGAT+GGG | + | chr7_2:28756234-28756253 | Msa1055180:CDS | 35.0% | |
| ! | TTTTGTGTGCTTCTGAACAT+AGG | - | chr7_2:28756465-28756484 | None:intergenic | 35.0% |
| ! | TTCAGAAGCACACAAAATGT+GGG | + | chr7_2:28756468-28756487 | Msa1055180:CDS | 35.0% |
| TGCGTAATTGTTTCACATGT+GGG | - | chr7_2:28756502-28756521 | None:intergenic | 35.0% | |
| ATGCGTAATTGTTTCACATG+TGG | - | chr7_2:28756503-28756522 | None:intergenic | 35.0% | |
| GGTATTAAACTTGTAACGAG+AGG | + | chr7_2:28756737-28756756 | Msa1055180:CDS | 35.0% | |
| GTGGAGAATACTGTCATTGT+TGG | - | chr7_2:28752204-28752223 | None:intergenic | 40.0% | |
| TACTGGGAAAATCTGTTTGG+TGG | - | chr7_2:28752223-28752242 | None:intergenic | 40.0% | |
| CTTCGGTTTCGTAGTTTACT+GGG | - | chr7_2:28752239-28752258 | None:intergenic | 40.0% | |
| ACTTCGGTTTCGTAGTTTAC+TGG | - | chr7_2:28752240-28752259 | None:intergenic | 40.0% | |
| GTTGACATCAACAGAAGGAT+CGG | - | chr7_2:28752325-28752344 | None:intergenic | 40.0% | |
| GCATGAACAGCAAGAAAAAG+AGG | - | chr7_2:28752456-28752475 | None:intergenic | 40.0% | |
| !!! | CTTTTTCTTGCTGTTCATGC+TGG | + | chr7_2:28752456-28752475 | Msa1055180:CDS | 40.0% |
| !! | TGAGCTTGTTAGGAAGTTAC+TGG | + | chr7_2:28752485-28752504 | Msa1055180:CDS | 40.0% |
| GTAATCACTTCGTCATTGCT+CGG | + | chr7_2:28752507-28752526 | Msa1055180:intron | 40.0% | |
| ATATGTCAATGTCGTGACAC+CGG | - | chr7_2:28752894-28752913 | None:intergenic | 40.0% | |
| GAATCCTTCGCGTTTATTGA+TGG | + | chr7_2:28753195-28753214 | Msa1055180:intron | 40.0% | |
| ATTAGGCCATGATTGTTGAG+AGG | + | chr7_2:28753509-28753528 | Msa1055180:intron | 40.0% | |
| ACTCATCCTCTCAACAATCA+TGG | - | chr7_2:28753518-28753537 | None:intergenic | 40.0% | |
| ! | TTTAGAACTCCGAGCTTACA+TGG | - | chr7_2:28753913-28753932 | None:intergenic | 40.0% |
| GTAAACCAAAAGCTCTTCAG+AGG | + | chr7_2:28754040-28754059 | Msa1055180:CDS | 40.0% | |
| TGTGGTTGAGACACTCATAA+AGG | + | chr7_2:28754279-28754298 | Msa1055180:CDS | 40.0% | |
| ! | TTGTCTTCTTTCTAGAGGCT+TGG | + | chr7_2:28754430-28754449 | Msa1055180:intron | 40.0% |
| ! | TGTCTTCTTTCTAGAGGCTT+GGG | + | chr7_2:28754431-28754450 | Msa1055180:intron | 40.0% |
| !! | ATAATAAGCTGAGTACTGGC+AGG | - | chr7_2:28754563-28754582 | None:intergenic | 40.0% |
| !! | ATCGTTTTTCAATGGCAGTG+TGG | + | chr7_2:28754641-28754660 | Msa1055180:intron | 40.0% |
| !! | TAAGTGACTGTAAAAGCACC+CGG | - | chr7_2:28754688-28754707 | None:intergenic | 40.0% |
| TAGTTGCAGCTGTAGTTCAT+AGG | + | chr7_2:28754744-28754763 | Msa1055180:CDS | 40.0% | |
| CGGCCTAACATCATTAAAAG+AGG | - | chr7_2:28755077-28755096 | None:intergenic | 40.0% | |
| !!! | CTACGACGGATTTTGAAGTA+AGG | + | chr7_2:28755253-28755272 | Msa1055180:CDS | 40.0% |
| !!! | ACGGATTTTGAAGTAAGGCT+TGG | + | chr7_2:28755258-28755277 | Msa1055180:CDS | 40.0% |
| AAAATACTCAACTGCACACC+AGG | - | chr7_2:28755358-28755377 | None:intergenic | 40.0% | |
| ! | CTTAGAATGTGGTGCTAATG+TGG | + | chr7_2:28755497-28755516 | Msa1055180:CDS | 40.0% |
| !!! | CTTGCTGGTTGTTTTGACAA+GGG | - | chr7_2:28755526-28755545 | None:intergenic | 40.0% |
| !!! | TCTTGCTGGTTGTTTTGACA+AGG | - | chr7_2:28755527-28755546 | None:intergenic | 40.0% |
| ! | CACTGCTTGTTGAAAACCAT+GGG | - | chr7_2:28755790-28755809 | None:intergenic | 40.0% |
| ATTGCTGGATTTGGGTATCT+TGG | - | chr7_2:28755832-28755851 | None:intergenic | 40.0% | |
| !! | AGATGATAGTGGTTTCTCAG+CGG | + | chr7_2:28755950-28755969 | Msa1055180:CDS | 40.0% |
| GCTATGCATACAGCTATGAA+AGG | + | chr7_2:28755972-28755991 | Msa1055180:CDS | 40.0% | |
| TGATGTGAATGTTCCAGATG+GGG | + | chr7_2:28756235-28756254 | Msa1055180:CDS | 40.0% | |
| AAAGCTTACAAAGGGATGCA+TGG | - | chr7_2:28756298-28756317 | None:intergenic | 40.0% | |
| AAACTGCACTTCTACTTGCA+AGG | + | chr7_2:28756363-28756382 | Msa1055180:CDS | 40.0% | |
| ! | GTTCAGAAGCACACAAAATG+TGG | + | chr7_2:28756467-28756486 | Msa1055180:CDS | 40.0% |
| AAGCACACAAAATGTGGGAA+GGG | + | chr7_2:28756473-28756492 | Msa1055180:CDS | 40.0% | |
| ! | TTCTTCAGGTGTGCTTTGTT+GGG | + | chr7_2:28756529-28756548 | Msa1055180:CDS | 40.0% |
| AGAAGAACCTGGATTGTTCA+GGG | + | chr7_2:28756643-28756662 | Msa1055180:CDS | 40.0% | |
| ! | TCAGGGTGCTTACTAAGAAT+AGG | + | chr7_2:28756660-28756679 | Msa1055180:CDS | 40.0% |
| ! | CAGGGTGCTTACTAAGAATA+GGG | + | chr7_2:28756661-28756680 | Msa1055180:CDS | 40.0% |
| ! | ACTGTCATTGTTGGTGAGTG+CGG | - | chr7_2:28752195-28752214 | None:intergenic | 45.0% |
| !! | TAGAAGGCGTTGTGAGACTT+CGG | - | chr7_2:28752256-28752275 | None:intergenic | 45.0% |
| GCGAAGTTGACATCAACAGA+AGG | - | chr7_2:28752330-28752349 | None:intergenic | 45.0% | |
| TCTGTTGATGTCAACTTCGC+CGG | + | chr7_2:28752330-28752349 | Msa1055180:CDS | 45.0% | |
| ACTCTTCAAACTAACCGCTC+CGG | - | chr7_2:28752352-28752371 | None:intergenic | 45.0% | |
| TCGAGTTTGCGTTGAGTTTC+AGG | + | chr7_2:28752410-28752429 | Msa1055180:CDS | 45.0% | |
| ! | CTGGAAATGCTGAGCTTGTT+AGG | + | chr7_2:28752475-28752494 | Msa1055180:CDS | 45.0% |
| !! | TAGAAGTGTCGATGCGATAG+AGG | - | chr7_2:28752853-28752872 | None:intergenic | 45.0% |
| ! | TCATCTTCAAAGTAACGGGG+TGG | + | chr7_2:28753137-28753156 | Msa1055180:intron | 45.0% |
| CATATCTGACTATGTCGCTG+TGG | + | chr7_2:28753951-28753970 | Msa1055180:intron | 45.0% | |
| !! | CAAAGCCTCTGAAGAGCTTT+TGG | - | chr7_2:28754048-28754067 | None:intergenic | 45.0% |
| AGAAGAGCTTCTTCACAAGC+TGG | - | chr7_2:28754142-28754161 | None:intergenic | 45.0% | |
| AGCTTGTGAAGAAGCTCTTC+TGG | + | chr7_2:28754141-28754160 | Msa1055180:CDS | 45.0% | |
| TTGTGAAGAAGCTCTTCTGG+AGG | + | chr7_2:28754144-28754163 | Msa1055180:CDS | 45.0% | |
| ! | TTCTGGAGGCAAGTTACCAT+GGG | + | chr7_2:28754158-28754177 | Msa1055180:CDS | 45.0% |
| AGAGCGTGTACAGCAATATG+CGG | - | chr7_2:28754229-28754248 | None:intergenic | 45.0% | |
| TATTGCTGTACACGCTCTTG+TGG | + | chr7_2:28754231-28754250 | Msa1055180:CDS | 45.0% | |
| ! | TTTTCAATGGCAGTGTGGTG+TGG | + | chr7_2:28754646-28754665 | Msa1055180:intron | 45.0% |
| TCCACATTTGTGTGGAGAGA+AGG | - | chr7_2:28754713-28754732 | None:intergenic | 45.0% | |
| GAAGGAGCAAACTGACAACA+TGG | - | chr7_2:28754775-28754794 | None:intergenic | 45.0% | |
| ! | TGTTGTCAGTTTGCTCCTTC+AGG | + | chr7_2:28754775-28754794 | Msa1055180:CDS | 45.0% |
| ATTAAAAGAGGTGGCTGCCT+TGG | - | chr7_2:28755065-28755084 | None:intergenic | 45.0% | |
| !! | ACTACAGAATGGTGCTACGA+CGG | + | chr7_2:28755239-28755258 | Msa1055180:intron | 45.0% |
| TTGAAGTAAGGCTTGGAGCA+TGG | + | chr7_2:28755265-28755284 | Msa1055180:CDS | 45.0% | |
| TGGTCATGGGATAATGCAAC+TGG | + | chr7_2:28755285-28755304 | Msa1055180:CDS | 45.0% | |
| CTACACCATGCTATCCTTTG+TGG | + | chr7_2:28755450-28755469 | Msa1055180:CDS | 45.0% | |
| CATTGCCACAAAGGATAGCA+TGG | - | chr7_2:28755458-28755477 | None:intergenic | 45.0% | |
| TATCCTTTGTGGCAATGTCG+AGG | + | chr7_2:28755461-28755480 | Msa1055180:CDS | 45.0% | |
| CATGTGTACAGGAAGGAACT+CGG | - | chr7_2:28755550-28755569 | None:intergenic | 45.0% | |
| TTGAACTCTCGAACAGACTC+TGG | + | chr7_2:28755627-28755646 | Msa1055180:CDS | 45.0% | |
| ! | CTCAAAGTACTAACAAGGGC+TGG | + | chr7_2:28755696-28755715 | Msa1055180:CDS | 45.0% |
| ! | CCACTGCTTGTTGAAAACCA+TGG | - | chr7_2:28755791-28755810 | None:intergenic | 45.0% |
| ! | CCATGGTTTTCAACAAGCAG+TGG | + | chr7_2:28755788-28755807 | Msa1055180:CDS | 45.0% |
| ! | TGGTTTTCAACAAGCAGTGG+TGG | + | chr7_2:28755791-28755810 | Msa1055180:CDS | 45.0% |
| GTTACATTGCTGACCAGCAA+AGG | + | chr7_2:28756209-28756228 | Msa1055180:CDS | 45.0% | |
| TCCACTCATGTTAGCAGCAA+GGG | + | chr7_2:28756268-28756287 | Msa1055180:CDS | 45.0% | |
| CTACTTGCAAGGAAATTCGC+AGG | + | chr7_2:28756374-28756393 | Msa1055180:CDS | 45.0% | |
| TTGCAAGGAAATTCGCAGGA+GGG | + | chr7_2:28756378-28756397 | Msa1055180:CDS | 45.0% | |
| AGATGAACTTGCCCGTAAAC+TGG | + | chr7_2:28756427-28756446 | Msa1055180:CDS | 45.0% | |
| GAAGCACACAAAATGTGGGA+AGG | + | chr7_2:28756472-28756491 | Msa1055180:CDS | 45.0% | |
| TTACGCATGTTGCGTTCTTC+AGG | + | chr7_2:28756515-28756534 | Msa1055180:CDS | 45.0% | |
| GTTCTTCAGGTGTGCTTTGT+TGG | + | chr7_2:28756528-28756547 | Msa1055180:CDS | 45.0% | |
| ! | TCTTCAGGTGTGCTTTGTTG+GGG | + | chr7_2:28756530-28756549 | Msa1055180:CDS | 45.0% |
| TTTCTACGCAATGTCGAGCT+TGG | - | chr7_2:28756602-28756621 | None:intergenic | 45.0% | |
| GCTCGACATTGCGTAGAAAT+AGG | + | chr7_2:28756603-28756622 | Msa1055180:CDS | 45.0% | |
| CGTAGAAATAGGCACAACAC+AGG | + | chr7_2:28756614-28756633 | Msa1055180:CDS | 45.0% | |
| CAGAAGAACCTGGATTGTTC+AGG | + | chr7_2:28756642-28756661 | Msa1055180:CDS | 45.0% | |
| GGTGCTTACTAAGAATAGGG+AGG | + | chr7_2:28756664-28756683 | Msa1055180:CDS | 45.0% | |
| GAGGTGCATTTCGTATGTGA+GGG | + | chr7_2:28756683-28756702 | Msa1055180:CDS | 45.0% | |
| AGGTGCATTTCGTATGTGAG+GGG | + | chr7_2:28756684-28756703 | Msa1055180:CDS | 45.0% | |
| GTCAGAAGCTGCTAAGCTTT+GGG | + | chr7_2:28756709-28756728 | Msa1055180:CDS | 45.0% | |
| GAGTGGTGGTTAGGGACTTA+GGG | - | chr7_2:28752157-28752176 | None:intergenic | 50.0% | |
| ! | CTTCTAGAAGCCTCTCACTC+CGG | + | chr7_2:28752270-28752289 | Msa1055180:CDS | 50.0% |
| AAAGGCTAAGGACAGATCGC+CGG | - | chr7_2:28752292-28752311 | None:intergenic | 50.0% | |
| GGAGATGCAGTGAAAGGCTA+AGG | - | chr7_2:28752304-28752323 | None:intergenic | 50.0% | |
| AGGATCGGAGATGCAGTGAA+AGG | - | chr7_2:28752310-28752329 | None:intergenic | 50.0% | |
| TGGTCGGGACAACATGGTAT+GGG | - | chr7_2:28753621-28753640 | None:intergenic | 50.0% | |
| ATGGTCGGGACAACATGGTA+TGG | - | chr7_2:28753622-28753641 | None:intergenic | 50.0% | |
| GTTCAATGGTCGGGACAACA+TGG | - | chr7_2:28753627-28753646 | None:intergenic | 50.0% | |
| !! | ACGCTGGTTCGCAGTGATTT+CGG | - | chr7_2:28753840-28753859 | None:intergenic | 50.0% |
| GGTAGCTCACCATGTAAGCT+CGG | + | chr7_2:28753901-28753920 | Msa1055180:intron | 50.0% | |
| AGCTTCTTCACAAGCTGGCT+GGG | - | chr7_2:28754137-28754156 | None:intergenic | 50.0% | |
| ! | CTTCTGGAGGCAAGTTACCA+TGG | + | chr7_2:28754157-28754176 | Msa1055180:CDS | 50.0% |
| CAAGTTACCATGGGCAAGCA+GGG | + | chr7_2:28754167-28754186 | Msa1055180:CDS | 50.0% | |
| CGTGTACAGCAATATGCGGT+CGG | - | chr7_2:28754225-28754244 | None:intergenic | 50.0% | |
| GCCTTCTCTCCACACAAATG+TGG | + | chr7_2:28754709-28754728 | Msa1055180:CDS | 50.0% | |
| TGCAGCTGTAGTTCATAGGC+AGG | + | chr7_2:28754748-28754767 | Msa1055180:CDS | 50.0% | |
| TAAGGCTTGGAGCATGGTCA+TGG | + | chr7_2:28755271-28755290 | Msa1055180:CDS | 50.0% | |
| AAGGCTTGGAGCATGGTCAT+GGG | + | chr7_2:28755272-28755291 | Msa1055180:CDS | 50.0% | |
| AACTGGCGAAGAACTTCGTG+TGG | + | chr7_2:28755302-28755321 | Msa1055180:CDS | 50.0% | |
| ACTGGCGAAGAACTTCGTGT+GGG | + | chr7_2:28755303-28755322 | Msa1055180:CDS | 50.0% | |
| GAGAACCATATGGCATCACC+TGG | + | chr7_2:28755337-28755356 | Msa1055180:CDS | 50.0% | |
| CGAGTTCCTTCCTGTACACA+TGG | + | chr7_2:28755548-28755567 | Msa1055180:CDS | 50.0% | |
| !!! | ACAAGGGCTGGTGCTGATTT+TGG | + | chr7_2:28755708-28755727 | Msa1055180:CDS | 50.0% |
| !! | TTTGGCTTGGTGAACAGTGC+AGG | + | chr7_2:28755726-28755745 | Msa1055180:CDS | 50.0% |
| CAATTGCCGAGTCGTACAAG+TGG | + | chr7_2:28755763-28755782 | Msa1055180:CDS | 50.0% | |
| ATGGGACCACTTGTACGACT+CGG | - | chr7_2:28755772-28755791 | None:intergenic | 50.0% | |
| TGTGAATGTTCCAGATGGGG+AGG | + | chr7_2:28756238-28756257 | Msa1055180:CDS | 50.0% | |
| CTCCACTCATGTTAGCAGCA+AGG | + | chr7_2:28756267-28756286 | Msa1055180:CDS | 50.0% | |
| TCCCTTGCTGCTAACATGAG+TGG | - | chr7_2:28756272-28756291 | None:intergenic | 50.0% | |
| CTCATGTTAGCAGCAAGGGA+AGG | + | chr7_2:28756272-28756291 | Msa1055180:CDS | 50.0% | |
| CTTGCAAGGAAATTCGCAGG+AGG | + | chr7_2:28756377-28756396 | Msa1055180:CDS | 50.0% | |
| AGGAGGGAAAAACGATGCAG+AGG | + | chr7_2:28756394-28756413 | Msa1055180:CDS | 50.0% | |
| GGAGGGAAAAACGATGCAGA+GGG | + | chr7_2:28756395-28756414 | Msa1055180:CDS | 50.0% | |
| CTTGCCCGTAAACTGGTACT+AGG | + | chr7_2:28756434-28756453 | Msa1055180:CDS | 50.0% | |
| ACCGCCTAGTACCAGTTTAC+GGG | - | chr7_2:28756441-28756460 | None:intergenic | 50.0% | |
| CACCGCCTAGTACCAGTTTA+CGG | - | chr7_2:28756442-28756461 | None:intergenic | 50.0% | |
| TTTGTTGGGGTCAGTCTAGC+AGG | + | chr7_2:28756543-28756562 | Msa1055180:CDS | 50.0% | |
| ACAGGTGATGCAGAAGAACC+TGG | + | chr7_2:28756632-28756651 | Msa1055180:CDS | 50.0% | |
| GTAAGCACCCTGAACAATCC+AGG | - | chr7_2:28756653-28756672 | None:intergenic | 50.0% | |
| ! | GGAGGTGCATTTCGTATGTG+AGG | + | chr7_2:28756682-28756701 | Msa1055180:CDS | 50.0% |
| GGTGCATTTCGTATGTGAGG+GGG | + | chr7_2:28756685-28756704 | Msa1055180:CDS | 50.0% | |
| GTGCATTTCGTATGTGAGGG+GGG | + | chr7_2:28756686-28756705 | Msa1055180:CDS | 50.0% | |
| TGCATTTCGTATGTGAGGGG+GGG | + | chr7_2:28756687-28756706 | Msa1055180:CDS | 50.0% | |
| GGTCAGAAGCTGCTAAGCTT+TGG | + | chr7_2:28756708-28756727 | Msa1055180:CDS | 50.0% | |
| !! | AAGCTGCTAAGCTTTGGGTG+AGG | + | chr7_2:28756714-28756733 | Msa1055180:CDS | 50.0% |
| !! | AGCTGCTAAGCTTTGGGTGA+GGG | + | chr7_2:28756715-28756734 | Msa1055180:CDS | 50.0% |
| GGAGTGGTGGTTAGGGACTT+AGG | - | chr7_2:28752158-28752177 | None:intergenic | 55.0% | |
| GGTGAAGGGAGTGGTGGTTA+GGG | - | chr7_2:28752165-28752184 | None:intergenic | 55.0% | |
| TGGTGAAGGGAGTGGTGGTT+AGG | - | chr7_2:28752166-28752185 | None:intergenic | 55.0% | |
| ! | GTCATTGTTGGTGAGTGCGG+CGG | - | chr7_2:28752192-28752211 | None:intergenic | 55.0% |
| CGGAGTGAGAGGCTTCTAGA+AGG | - | chr7_2:28752272-28752291 | None:intergenic | 55.0% | |
| TGATGTCAACTTCGCCGGAG+CGG | + | chr7_2:28752335-28752354 | Msa1055180:CDS | 55.0% | |
| CTTCGTCATTGCTCGGATCG+CGG | + | chr7_2:28752514-28752533 | Msa1055180:intron | 55.0% | |
| GGTCGGGACAACATGGTATG+GGG | - | chr7_2:28753620-28753639 | None:intergenic | 55.0% | |
| TTGCAACTACTGCAGCCGTG+AGG | + | chr7_2:28754065-28754084 | Msa1055180:CDS | 55.0% | |
| TGCAACTACTGCAGCCGTGA+GGG | + | chr7_2:28754066-28754085 | Msa1055180:CDS | 55.0% | |
| ATCAAGATGGCCCTCCCTCA+CGG | - | chr7_2:28754083-28754102 | None:intergenic | 55.0% | |
| GAGCTTCTTCACAAGCTGGC+TGG | - | chr7_2:28754138-28754157 | None:intergenic | 55.0% | |
| GCAAGTTACCATGGGCAAGC+AGG | + | chr7_2:28754166-28754185 | Msa1055180:CDS | 55.0% | |
| TCTTGTGGCTGCATGCTGCA+GGG | + | chr7_2:28754246-28754265 | Msa1055180:CDS | 55.0% | |
| TGGATGCAAGTGCGACAGAC+CGG | + | chr7_2:28754666-28754685 | Msa1055180:CDS | 55.0% | |
| GAAGAACTTCGTGTGGGTGC+TGG | + | chr7_2:28755309-28755328 | Msa1055180:CDS | 55.0% | |
| ! | GCTGGACTGGGAGAACCATA+TGG | + | chr7_2:28755327-28755346 | Msa1055180:CDS | 55.0% |
| GCACACCAGGTGATGCCATA+TGG | - | chr7_2:28755345-28755364 | None:intergenic | 55.0% | |
| CAGCCTCGACATTGCCACAA+AGG | - | chr7_2:28755467-28755486 | None:intergenic | 55.0% | |
| GTGGCAATGTCGAGGCTGTT+AGG | + | chr7_2:28755469-28755488 | Msa1055180:CDS | 55.0% | |
| AGGAAGGAACTCGGTCTTGC+TGG | - | chr7_2:28755541-28755560 | None:intergenic | 55.0% | |
| GAGACGCCATGTGTACAGGA+AGG | - | chr7_2:28755557-28755576 | None:intergenic | 55.0% | |
| AGACGAGACGCCATGTGTAC+AGG | - | chr7_2:28755561-28755580 | None:intergenic | 55.0% | |
| GTACACATGGCGTCTCGTCT+AGG | + | chr7_2:28755561-28755580 | Msa1055180:CDS | 55.0% | |
| !!! | GGCTGGTGCTGATTTTGGCT+TGG | + | chr7_2:28755713-28755732 | Msa1055180:CDS | 55.0% |
| GAGTCGTACAAGTGGTCCCA+TGG | + | chr7_2:28755771-28755790 | Msa1055180:CDS | 55.0% | |
| TTACACTGTGCAGCTCGTCG+TGG | + | chr7_2:28756173-28756192 | Msa1055180:CDS | 55.0% | |
| TGCAGCTCGTCGTGGTGATT+TGG | + | chr7_2:28756181-28756200 | Msa1055180:CDS | 55.0% | |
| GCCCGTAAACTGGTACTAGG+CGG | + | chr7_2:28756437-28756456 | Msa1055180:CDS | 55.0% | |
| !! | GCTGCTAAGCTTTGGGTGAG+GGG | + | chr7_2:28756716-28756735 | Msa1055180:CDS | 55.0% |
| TCGATTCTCGCGTTCCTCCG+TGG | + | chr7_2:28752121-28752140 | Msa1055180:five_prime_UTR | 60.0% | |
| CTTAGGGTGAGCATGCGCCA+CGG | - | chr7_2:28752141-28752160 | None:intergenic | 60.0% | |
| ! | ATTGTTGGTGAGTGCGGCGG+CGG | - | chr7_2:28752189-28752208 | None:intergenic | 60.0% |
| AACTACTGCAGCCGTGAGGG+AGG | + | chr7_2:28754069-28754088 | Msa1055180:CDS | 60.0% | |
| ACTACTGCAGCCGTGAGGGA+GGG | + | chr7_2:28754070-28754089 | Msa1055180:CDS | 60.0% | |
| TACCATGGGCAAGCAGGGTG+TGG | + | chr7_2:28754172-28754191 | Msa1055180:CDS | 60.0% | |
| ACCATGGGCAAGCAGGGTGT+GGG | + | chr7_2:28754173-28754192 | Msa1055180:CDS | 60.0% | |
| CTCTTGTGGCTGCATGCTGC+AGG | + | chr7_2:28754245-28754264 | Msa1055180:CDS | 60.0% | |
| CTTGTGGCTGCATGCTGCAG+GGG | + | chr7_2:28754247-28754266 | Msa1055180:CDS | 60.0% | |
| TTGTGGCTGCATGCTGCAGG+GGG | + | chr7_2:28754248-28754267 | Msa1055180:CDS | 60.0% | |
| CTGCAGGGGGTTTGTCGATG+TGG | + | chr7_2:28754261-28754280 | Msa1055180:CDS | 60.0% | |
| GGATGCAAGTGCGACAGACC+GGG | + | chr7_2:28754667-28754686 | Msa1055180:CDS | 60.0% | |
| !! | ACTTCGTGTGGGTGCTGGAC+TGG | + | chr7_2:28755314-28755333 | Msa1055180:CDS | 60.0% |
| !! | CTTCGTGTGGGTGCTGGACT+GGG | + | chr7_2:28755315-28755334 | Msa1055180:CDS | 60.0% |
| GGAGTGTAGTCCTCCCCATC+TGG | - | chr7_2:28756251-28756270 | None:intergenic | 60.0% | |
| GAGAAACGTGATGTGCCGCG+AGG | + | chr7_2:28756565-28756584 | Msa1055180:CDS | 60.0% | |
| ATGTGCCGCGAGGCAGTGTT+AGG | + | chr7_2:28756575-28756594 | Msa1055180:CDS | 60.0% | |
| TGTGCCGCGAGGCAGTGTTA+GGG | + | chr7_2:28756576-28756595 | Msa1055180:CDS | 60.0% | |
| TTGGCCCTAACACTGCCTCG+CGG | - | chr7_2:28756583-28756602 | None:intergenic | 60.0% | |
| GGACAGATCGCCGGAGTGAG+AGG | - | chr7_2:28752283-28752302 | None:intergenic | 65.0% | |
| CCATGGGCAAGCAGGGTGTG+GGG | + | chr7_2:28754174-28754193 | Msa1055180:CDS | 65.0% | |
| AGGGTGAGCATGCGCCACGG+AGG | - | chr7_2:28752138-28752157 | None:intergenic | 70.0% | |
| GGCGGTGGTGAAGGGAGTGG+TGG | - | chr7_2:28752171-28752190 | None:intergenic | 70.0% | |
| AGTGCGGCGGCGGTGGTGAA+GGG | - | chr7_2:28752179-28752198 | None:intergenic | 70.0% | |
| CCCCACACCCTGCTTGCCCA+TGG | - | chr7_2:28754177-28754196 | None:intergenic | 70.0% | |
| GGCGGCGGTGGTGAAGGGAG+TGG | - | chr7_2:28752174-28752193 | None:intergenic | 75.0% | |
| GAGTGCGGCGGCGGTGGTGA+AGG | - | chr7_2:28752180-28752199 | None:intergenic | 75.0% | |
| ! | GTTGGTGAGTGCGGCGGCGG+TGG | - | chr7_2:28752186-28752205 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 28752120 | 28756766 | 28752120 | ID=Msa1055180;Name=Msa1055180 |
| chr7_2 | mRNA | 28752120 | 28756766 | 28752120 | ID=Msa1055180-mRNA-1;Parent=Msa1055180;Name=Msa1055180-mRNA-1;_AED=0.06;_eAED=0.06;_QI=87|1|0.75|1|1|1|4|0|744 |
| chr7_2 | exon | 28752120 | 28752506 | 28752120 | ID=Msa1055180-mRNA-1:exon:5961;Parent=Msa1055180-mRNA-1 |
| chr7_2 | exon | 28754025 | 28754300 | 28754025 | ID=Msa1055180-mRNA-1:exon:5962;Parent=Msa1055180-mRNA-1 |
| chr7_2 | exon | 28754659 | 28754796 | 28754659 | ID=Msa1055180-mRNA-1:exon:5963;Parent=Msa1055180-mRNA-1 |
| chr7_2 | exon | 28755246 | 28756766 | 28755246 | ID=Msa1055180-mRNA-1:exon:5964;Parent=Msa1055180-mRNA-1 |
| chr7_2 | five_prime_UTR | 28752120 | 28752206 | 28752120 | ID=Msa1055180-mRNA-1:five_prime_utr;Parent=Msa1055180-mRNA-1 |
| chr7_2 | CDS | 28752207 | 28752506 | 28752207 | ID=Msa1055180-mRNA-1:cds;Parent=Msa1055180-mRNA-1 |
| chr7_2 | CDS | 28754025 | 28754300 | 28754025 | ID=Msa1055180-mRNA-1:cds;Parent=Msa1055180-mRNA-1 |
| chr7_2 | CDS | 28754659 | 28754796 | 28754659 | ID=Msa1055180-mRNA-1:cds;Parent=Msa1055180-mRNA-1 |
| chr7_2 | CDS | 28755246 | 28756766 | 28755246 | ID=Msa1055180-mRNA-1:cds;Parent=Msa1055180-mRNA-1 |
| Gene Sequence |
| Protein sequence |
