Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1093580 | XP_003622205.1 | 95.383 | 758 | 22 | 1 | 1 | 758 | 1 | 745 | 0.0 | 1472 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1093580 | sp|P16157|ANK1_HUMAN | 25.215 | 698 | 412 | 25 | 15 | 649 | 9 | 659 | 4.36e-32 | 138 |
| Msa1093580 | sp|P16157|ANK1_HUMAN | 24.789 | 593 | 351 | 15 | 81 | 633 | 240 | 777 | 1.79e-20 | 101 |
| Msa1093580 | sp|P16157|ANK1_HUMAN | 24.253 | 569 | 363 | 21 | 79 | 637 | 205 | 715 | 1.66e-15 | 85.1 |
| Msa1093580 | sp|P16157|ANK1_HUMAN | 24.346 | 382 | 253 | 13 | 311 | 682 | 39 | 394 | 2.35e-14 | 81.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1093580 | G7L3C3 | 95.383 | 758 | 22 | 1 | 1 | 758 | 1 | 745 | 0.0 | 1472 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1013920 | Msa1093580 | 0.920082 | 2.005252e-87 | -8.615850e-47 |
| Msa1055180 | Msa1093580 | 0.819371 | 1.203102e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1093580 | MtrunA17_Chr7g0226271 | 95.383 | 758 | 22 | 1 | 1 | 758 | 1 | 745 | 0.0 | 1472 |
| Msa1093580 | MtrunA17_Chr3g0122751 | 57.049 | 759 | 303 | 7 | 7 | 756 | 13 | 757 | 0.0 | 840 |
| Msa1093580 | MtrunA17_Chr4g0073161 | 28.346 | 254 | 136 | 8 | 449 | 659 | 40 | 290 | 2.87e-13 | 73.2 |
| Msa1093580 | MtrunA17_Chr6g0461061 | 24.430 | 307 | 165 | 7 | 379 | 627 | 170 | 467 | 5.55e-13 | 72.4 |
| Msa1093580 | MtrunA17_Chr3g0082141 | 26.269 | 335 | 191 | 9 | 316 | 635 | 513 | 806 | 7.67e-13 | 72.8 |
| Msa1093580 | MtrunA17_Chr1g0164551 | 25.956 | 366 | 212 | 10 | 316 | 667 | 76 | 396 | 1.97e-12 | 70.9 |
| Msa1093580 | MtrunA17_Chr5g0418551 | 32.090 | 134 | 85 | 2 | 501 | 630 | 65 | 196 | 2.95e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1093580 | AT5G14230.1 | 61.265 | 759 | 272 | 5 | 1 | 756 | 1 | 740 | 0.0 | 907 |
| Msa1093580 | AT5G14230.2 | 60.100 | 599 | 217 | 5 | 161 | 756 | 1 | 580 | 0.0 | 699 |
| Msa1093580 | AT5G13530.2 | 25.758 | 330 | 217 | 9 | 316 | 625 | 511 | 832 | 6.74e-13 | 73.2 |
| Msa1093580 | AT5G13530.1 | 25.378 | 331 | 218 | 9 | 316 | 625 | 511 | 833 | 1.69e-12 | 72.0 |
Find 196 sgRNAs with CRISPR-Local
Find 360 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCAATGCCTAATTGATTT+TGG | 0.159363 | 7_3:+13619395 | Msa1093580:CDS |
| TCGAGTTTGTGTTGAGTTTC+AGG | 0.163089 | 7_3:+13616219 | Msa1093580:CDS |
| ACAAGGGCTGGTGCTGATTT+TGG | 0.171693 | 7_3:+13619506 | Msa1093580:CDS |
| CAAAGCCTCTGAAGAGCTTT+TGG | 0.229513 | 7_3:-13617838 | None:intergenic |
| AGTAGAAGTATTGCTGGATT+TGG | 0.255545 | 7_3:-13619636 | None:intergenic |
| CTGTGCTGCGAGGCAGTGTT+AGG | 0.267092 | 7_3:+13620373 | Msa1093580:CDS |
| TTGAAAACTGTCATTGAATC+TGG | 0.269575 | 7_3:+13619704 | Msa1093580:CDS |
| TGTTGTCAGTTTGCTCCTTC+AGG | 0.273672 | 7_3:+13618573 | Msa1093580:CDS |
| CTCTTGTGGCTGCATGCTGC+AGG | 0.273850 | 7_3:+13618038 | Msa1093580:CDS |
| CGAATTTCTTTGCAAGTAGA+AGG | 0.278442 | 7_3:-13620168 | None:intergenic |
| GGTCAGAAGCTGCTAAGCTT+TGG | 0.287071 | 7_3:+13620509 | Msa1093580:CDS |
| TTCTTCAGGTGTGCTTTGTT+GGG | 0.306841 | 7_3:+13620327 | Msa1093580:CDS |
| ACTTCGGTTTCGTAGTTTAC+TGG | 0.311637 | 7_3:-13616046 | None:intergenic |
| TTACGTATGTTGCGTTCTTC+AGG | 0.312789 | 7_3:+13620313 | Msa1093580:CDS |
| GCTCAACATTGCGTAGAAAT+AGG | 0.324872 | 7_3:+13620401 | Msa1093580:CDS |
| GTTCTTCAGGTGTGCTTTGT+TGG | 0.326228 | 7_3:+13620326 | Msa1093580:CDS |
| CTGGAAATGCTGAGCTTGTT+AGG | 0.333522 | 7_3:+13616284 | Msa1093580:CDS |
| CAGAAGAACCTGGATTGTTC+AGG | 0.339711 | 7_3:+13620440 | Msa1093580:CDS |
| AATCACAACCAAAATCAATT+AGG | 0.356750 | 7_3:-13619403 | None:intergenic |
| GAGTGCGGCGGTGGTGGTGA+AGG | 0.356795 | 7_3:-13615986 | None:intergenic |
| GTAGAAGTATTGCTGGATTT+GGG | 0.356951 | 7_3:-13619635 | None:intergenic |
| ACTTCGTGTGGGTGCTGGAC+TGG | 0.365888 | 7_3:+13619112 | Msa1093580:CDS |
| ATTCACATCAAAACCTTTGC+TGG | 0.367833 | 7_3:-13620020 | None:intergenic |
| TGAGCTTGTTAGGAAGTTAC+TGG | 0.376528 | 7_3:+13616294 | Msa1093580:CDS |
| GGATGCCCCTGCATTAATTA+AGG | 0.378185 | 7_3:-13617906 | None:intergenic |
| GTGGCAATGTCGAGGCTGTT+AGG | 0.384969 | 7_3:+13619267 | Msa1093580:CDS |
| TGCAGCTCGTCGTGGTGATT+TGG | 0.389340 | 7_3:+13619979 | Msa1093580:CDS |
| GAACTGTAATTTATTTGAAA+AGG | 0.390139 | 7_3:+13619892 | Msa1093580:CDS |
| CTACACCATGCTATCCTTTG+TGG | 0.401877 | 7_3:+13619248 | Msa1093580:CDS |
| CACCGCCTAGTACCAGTTTA+CGG | 0.403132 | 7_3:-13620237 | None:intergenic |
| AGATGAACTTGCCCGTAAAC+TGG | 0.403528 | 7_3:+13620225 | Msa1093580:CDS |
| GTCAGAAGCTGCTAAGCTTT+GGG | 0.405076 | 7_3:+13620510 | Msa1093580:CDS |
| GAAAGGGGTAATCAAAATAC+TGG | 0.416275 | 7_3:+13619935 | Msa1093580:CDS |
| AGCTTCTTCACAAGCTGGCT+GGG | 0.416665 | 7_3:-13617927 | None:intergenic |
| AGCTTGTGAAGAAGCTCTTC+TGG | 0.417060 | 7_3:+13617934 | Msa1093580:CDS |
| GGGTGCTTACTAATAAGAAT+AGG | 0.420256 | 7_3:+13620461 | Msa1093580:CDS |
| AGGAAGGAACTCGGTCTTGC+TGG | 0.420463 | 7_3:-13619336 | None:intergenic |
| GCTTGAATTTACACTTGAAA+GGG | 0.421021 | 7_3:+13619919 | Msa1093580:CDS |
| CTTGAGACCTTAATTAATGC+AGG | 0.427693 | 7_3:+13617899 | Msa1093580:CDS |
| CTTCGTGTGGGTGCTGGACT+GGG | 0.429796 | 7_3:+13619113 | Msa1093580:CDS |
| GTAAAGTTATGCAATAAATC+TGG | 0.432261 | 7_3:+13619836 | Msa1093580:CDS |
| TACCATGGGCAAGCAGGGTG+TGG | 0.435095 | 7_3:+13617965 | Msa1093580:CDS |
| GGAGTGTAGTCCTCCCCATC+TGG | 0.437604 | 7_3:-13620046 | None:intergenic |
| TTTGTTGGGGCCAGTCTAGC+AGG | 0.438563 | 7_3:+13620341 | Msa1093580:CDS |
| TTTCGATTGCTTGTATATGC+TGG | 0.439274 | 7_3:+13619806 | Msa1093580:CDS |
| GAGCTTCTTCACAAGCTGGC+TGG | 0.439752 | 7_3:-13617928 | None:intergenic |
| GTTTACTGGGAAAATCTGTT+TGG | 0.447674 | 7_3:-13616032 | None:intergenic |
| GGTGCTTACTAATAAGAATA+GGG | 0.450836 | 7_3:+13620462 | Msa1093580:CDS |
| CTTGACTATCAAGATGATAG+TGG | 0.456936 | 7_3:+13619737 | Msa1093580:CDS |
| AGGGAGTGGTGGTTAGAGAT+AGG | 0.457371 | 7_3:-13615966 | None:intergenic |
| GCAAGTTACCATGGGCAAGC+AGG | 0.458287 | 7_3:+13617959 | Msa1093580:CDS |
| CTTCGGTTTCGTAGTTTACT+GGG | 0.458349 | 7_3:-13616045 | None:intergenic |
| TCTTGTGGCTGCATGCTGCA+GGG | 0.459877 | 7_3:+13618039 | Msa1093580:CDS |
| ATTAGGCATTGAGATATTGC+AGG | 0.461712 | 7_3:-13619386 | None:intergenic |
| GTGGTGGATGTAATTAGAAA+TGG | 0.462784 | 7_3:+13619605 | Msa1093580:CDS |
| TAGTTGCAGCTGTAGTTCAT+AGG | 0.467183 | 7_3:+13618542 | Msa1093580:CDS |
| GTGGAGAATACTGTCATTGT+TGG | 0.468123 | 7_3:-13616010 | None:intergenic |
| GCACGTTTCTCCTGCTAGAC+TGG | 0.468551 | 7_3:-13620351 | None:intergenic |
| GGTGCATTTCGTATGTGAGG+GGG | 0.470458 | 7_3:+13620486 | Msa1093580:CDS |
| TTTCTACGCAATGTTGAGCT+TGG | 0.472003 | 7_3:-13620397 | None:intergenic |
| GTTGGTGAGTGCGGCGGTGG+TGG | 0.472906 | 7_3:-13615992 | None:intergenic |
| AGTGCGGCGGTGGTGGTGAA+GGG | 0.474019 | 7_3:-13615985 | None:intergenic |
| AACTATTTGAGACATGTTGC+AGG | 0.474097 | 7_3:-13619205 | None:intergenic |
| TTCTTGAAATGACAGAGTGT+TGG | 0.475631 | 7_3:+13617803 | Msa1093580:intron |
| GAAGAACTTCGTGTGGGTGC+TGG | 0.484007 | 7_3:+13619107 | Msa1093580:CDS |
| GCACACCAGGTGATGCCATA+TGG | 0.484590 | 7_3:-13619140 | None:intergenic |
| TCTGTTGATGTCAACTTCGC+CGG | 0.484593 | 7_3:+13616139 | Msa1093580:CDS |
| CGGAGTGGGAGGCTTGTAGA+AGG | 0.485146 | 7_3:-13616078 | None:intergenic |
| TGCTTGAATTTACACTTGAA+AGG | 0.487179 | 7_3:+13619918 | Msa1093580:CDS |
| TGAAATTAAAAGCTTACAAA+GGG | 0.488174 | 7_3:-13620101 | None:intergenic |
| TGGTCATGGGATAATGCAAC+TGG | 0.491893 | 7_3:+13619083 | Msa1093580:CDS |
| GTACACATGGCGTCTCGTCT+AGG | 0.493808 | 7_3:+13619359 | Msa1093580:CDS |
| TACTGGGAAAATCTGTTTGG+TGG | 0.494305 | 7_3:-13616029 | None:intergenic |
| TTGTGGCTGCATGCTGCAGG+GGG | 0.494761 | 7_3:+13618041 | Msa1093580:CDS |
| GGCGGTGGTGGTGAAGGGAG+TGG | 0.496566 | 7_3:-13615980 | None:intergenic |
| TCCACATTTGTGTGGAGAGA+AGG | 0.496788 | 7_3:-13618508 | None:intergenic |
| ACCGCCTAGTACCAGTTTAC+GGG | 0.498041 | 7_3:-13620236 | None:intergenic |
| ACCATGGGCAAGCAGGGTGT+GGG | 0.499453 | 7_3:+13617966 | Msa1093580:CDS |
| AGACGAGACGCCATGTGTAC+AGG | 0.499544 | 7_3:-13619356 | None:intergenic |
| AGCTGCTAAGCTTTGGGTGA+GGG | 0.505228 | 7_3:+13620516 | Msa1093580:CDS |
| GGGTGTGGGGAATTGCTCAT+GGG | 0.506960 | 7_3:+13617980 | Msa1093580:CDS |
| TACGTAATTGTTTCACATGT+GGG | 0.507409 | 7_3:-13620297 | None:intergenic |
| TTTGGCTTGGTGAACAGTGC+AGG | 0.509382 | 7_3:+13619524 | Msa1093580:CDS |
| ATTGTTGGTGAGTGCGGCGG+TGG | 0.511745 | 7_3:-13615995 | None:intergenic |
| TGGATGCAAGTGCGACAGAC+CGG | 0.512269 | 7_3:+13618464 | Msa1093580:CDS |
| CTTGCCCGTAAACTGGTACT+AGG | 0.513587 | 7_3:+13620232 | Msa1093580:CDS |
| CTTGTGGCTGCATGCTGCAG+GGG | 0.513819 | 7_3:+13618040 | Msa1093580:CDS |
| TAAGGCTTGGAGCATGGTCA+TGG | 0.514093 | 7_3:+13619069 | Msa1093580:CDS |
| TTGAACTCTCGAACAGACTC+TGG | 0.514187 | 7_3:+13619425 | Msa1093580:CDS |
| AGGGTGTGGGGAATTGCTCA+TGG | 0.515456 | 7_3:+13617979 | Msa1093580:CDS |
| GCTGGACTGGGAGAACCATA+TGG | 0.517961 | 7_3:+13619125 | Msa1093580:CDS |
| CTTAGAATGTGGTGCTAATG+TGG | 0.519561 | 7_3:+13619295 | Msa1093580:CDS |
| TGCAGCTGTAGTTCATAGGC+AGG | 0.519700 | 7_3:+13618546 | Msa1093580:CDS |
| GAGTCGTACAAGTGGTCCTA+TGG | 0.520238 | 7_3:+13619569 | Msa1093580:CDS |
| ACAGGTGATGCAGAAGAACC+TGG | 0.523891 | 7_3:+13620430 | Msa1093580:CDS |
| CTCAAAGTACTAACAAGGGC+TGG | 0.525330 | 7_3:+13619494 | Msa1093580:CDS |
| TCTTCAGGTGTGCTTTGTTG+GGG | 0.526572 | 7_3:+13620328 | Msa1093580:CDS |
| TGTGGTTGAGACACTCATAA+AGG | 0.527208 | 7_3:+13618072 | Msa1093580:CDS |
| TAGAAGGCGTTGTGAGACTT+CGG | 0.532369 | 7_3:-13616062 | None:intergenic |
| TCCACTCATGTTAGCAGCAA+GGG | 0.533090 | 7_3:+13620066 | Msa1093580:CDS |
| GTAAGCACCCTGAACAATCC+AGG | 0.533602 | 7_3:-13620448 | None:intergenic |
| TCCCTTGCTGCTAACATGAG+TGG | 0.534250 | 7_3:-13620067 | None:intergenic |
| GTGCATTTCGTATGTGAGGG+GGG | 0.537706 | 7_3:+13620487 | Msa1093580:CDS |
| AGGTGCATTTCGTATGTGAG+GGG | 0.539200 | 7_3:+13620485 | Msa1093580:CDS |
| TTCTGGAGGCAAGTTACCAT+GGG | 0.540626 | 7_3:+13617951 | Msa1093580:CDS |
| TGCAACTACTGCAGCAGTGA+GGG | 0.541071 | 7_3:+13617859 | Msa1093580:CDS |
| GGATGCAAGTGCGACAGACC+GGG | 0.543220 | 7_3:+13618465 | Msa1093580:CDS |
| AGAAGAGCTTCTTCACAAGC+TGG | 0.543401 | 7_3:-13617932 | None:intergenic |
| GTTCAGAAGCACACAAAATG+TGG | 0.545439 | 7_3:+13620265 | Msa1093580:CDS |
| AGAAGAACCTGGATTGTTCA+GGG | 0.545678 | 7_3:+13620441 | Msa1093580:CDS |
| AAAATACTCAACTGCACACC+AGG | 0.552182 | 7_3:-13619153 | None:intergenic |
| TGTGCTGCGAGGCAGTGTTA+GGG | 0.555069 | 7_3:+13620374 | Msa1093580:CDS |
| GCCTTCTCTCCACACAAATG+TGG | 0.555992 | 7_3:+13618507 | Msa1093580:CDS |
| CTTCTGGAGGCAAGTTACCA+TGG | 0.556076 | 7_3:+13617950 | Msa1093580:CDS |
| TTGAGACCTTAATTAATGCA+GGG | 0.556601 | 7_3:+13617900 | Msa1093580:CDS |
| AAGCTGCTAAGCTTTGGGTG+AGG | 0.556926 | 7_3:+13620515 | Msa1093580:CDS |
| ATACGTAATTGTTTCACATG+TGG | 0.557480 | 7_3:-13620298 | None:intergenic |
| TTGAAGTAAGGCTTGGAGCA+TGG | 0.558223 | 7_3:+13619063 | Msa1093580:CDS |
| CCATGGGCAAGCAGGGTGTG+GGG | 0.560261 | 7_3:+13617967 | Msa1093580:CDS |
| GCTGCTAAGCTTTGGGTGAG+GGG | 0.561273 | 7_3:+13620517 | Msa1093580:CDS |
| GAGGTGCATTTCGTATGTGA+GGG | 0.563987 | 7_3:+13620484 | Msa1093580:CDS |
| GTTACATTGCTGACCAGCAA+AGG | 0.569092 | 7_3:+13620007 | Msa1093580:CDS |
| ACTCTTCAAACTAACAGCTC+CGG | 0.573075 | 7_3:-13616158 | None:intergenic |
| CAAGTTACCATGGGCAAGCA+GGG | 0.574424 | 7_3:+13617960 | Msa1093580:CDS |
| ATGAAATTAAAAGCTTACAA+AGG | 0.575942 | 7_3:-13620102 | None:intergenic |
| GGACAGATCGCCGGAGTGGG+AGG | 0.577562 | 7_3:-13616089 | None:intergenic |
| GTTGACATCAACAGAAGGAT+CGG | 0.578074 | 7_3:-13616131 | None:intergenic |
| CCCCACACCCTGCTTGCCCA+TGG | 0.578239 | 7_3:-13617967 | None:intergenic |
| CAGCCTCGACATTGCCACAA+AGG | 0.578878 | 7_3:-13619262 | None:intergenic |
| TTGCAAAGAAATTCGCAGAA+GGG | 0.578951 | 7_3:+13620176 | Msa1093580:CDS |
| GGAGATGCAGTGAAAGGCTA+AGG | 0.579580 | 7_3:-13616110 | None:intergenic |
| TTGATGTGAATGTTCCAGAT+GGG | 0.580176 | 7_3:+13620032 | Msa1093580:CDS |
| CTTGAATTTACACTTGAAAG+GGG | 0.580515 | 7_3:+13619920 | Msa1093580:CDS |
| CGATTCTCGCGTTTCCTCCG+TGG | 0.581973 | 7_3:+13615933 | Msa1093580:five_prime_UTR |
| TTCAGAAGCACACAAAATGT+GGG | 0.586232 | 7_3:+13620266 | Msa1093580:CDS |
| AACTACTGCAGCAGTGAGGG+AGG | 0.586911 | 7_3:+13617862 | Msa1093580:CDS |
| TTTATTGCATAACTTTACAT+CGG | 0.586946 | 7_3:-13619831 | None:intergenic |
| AAGGCTTGGAGCATGGTCAT+GGG | 0.588256 | 7_3:+13619070 | Msa1093580:CDS |
| CGAGTTCCTTCCTGTACACA+TGG | 0.588613 | 7_3:+13619346 | Msa1093580:CDS |
| GGAGGTGCATTTCGTATGTG+AGG | 0.592475 | 7_3:+13620483 | Msa1093580:CDS |
| GTCTCAAATAGTTGTCATTG+TGG | 0.592574 | 7_3:+13619215 | Msa1093580:CDS |
| ACTGTCATTGTTGGTGAGTG+CGG | 0.596472 | 7_3:-13616001 | None:intergenic |
| TGCATTTCGTATGTGAGGGG+GGG | 0.598096 | 7_3:+13620488 | Msa1093580:CDS |
| GAAGCACACAAAATGTGGGA+AGG | 0.598612 | 7_3:+13620270 | Msa1093580:CDS |
| AAAGCTTACAAAGGGATGCA+TGG | 0.599357 | 7_3:-13620093 | None:intergenic |
| TTGTGCAAAATATAAACAAG+AGG | 0.605272 | 7_3:+13619466 | Msa1093580:CDS |
| CTTGCAAAGAAATTCGCAGA+AGG | 0.611082 | 7_3:+13620175 | Msa1093580:CDS |
| TGAGACCTTAATTAATGCAG+GGG | 0.611370 | 7_3:+13617901 | Msa1093580:CDS |
| GAATTTCTTTGCAAGTAGAA+GGG | 0.611776 | 7_3:-13620167 | None:intergenic |
| CATTACAATCCACATTTGTG+TGG | 0.611859 | 7_3:-13618516 | None:intergenic |
| CATGTGTACAGGAAGGAACT+CGG | 0.612747 | 7_3:-13619345 | None:intergenic |
| AAGCACACAAAATGTGGGAA+GGG | 0.613050 | 7_3:+13620271 | Msa1093580:CDS |
| AGGATCGGAGATGCAGTGAA+AGG | 0.613374 | 7_3:-13616116 | None:intergenic |
| CATTGCCACAAAGGATAGCA+TGG | 0.613821 | 7_3:-13619253 | None:intergenic |
| AAAGGCTAAGGACAGATCGC+CGG | 0.614312 | 7_3:-13616098 | None:intergenic |
| GGTGGTGGTGAAGGGAGTGG+TGG | 0.615978 | 7_3:-13615977 | None:intergenic |
| GAGAACCATATGGCATCACC+TGG | 0.618277 | 7_3:+13619135 | Msa1093580:CDS |
| ACTACTGCAGCAGTGAGGGA+GGG | 0.618729 | 7_3:+13617863 | Msa1093580:CDS |
| CTCCACTCATGTTAGCAGCA+AGG | 0.618965 | 7_3:+13620065 | Msa1093580:CDS |
| TGATGTGAATGTTCCAGATG+GGG | 0.620066 | 7_3:+13620033 | Msa1093580:CDS |
| AGGTCTCAAGAATATCAAGA+TGG | 0.621096 | 7_3:-13617886 | None:intergenic |
| AGTGTCTCAAAGTACTAACA+AGG | 0.623722 | 7_3:+13619489 | Msa1093580:CDS |
| TTTGATGTGAATGTTCCAGA+TGG | 0.625886 | 7_3:+13620031 | Msa1093580:CDS |
| GTAAACCAAAAGCTCTTCAG+AGG | 0.628315 | 7_3:+13617833 | Msa1093580:CDS |
| TATTGCTGTACACGCTCTTG+TGG | 0.628876 | 7_3:+13618024 | Msa1093580:CDS |
| GAGAAACGTGCTGTGCTGCG+AGG | 0.633297 | 7_3:+13620363 | Msa1093580:CDS |
| GAAGGAGCAAACTGACAACA+TGG | 0.634842 | 7_3:-13618570 | None:intergenic |
| TAAGTGACTGTAAAAGCACC+CGG | 0.636325 | 7_3:-13618483 | None:intergenic |
| GCTATGCATACAGCTATGAA+AGG | 0.641849 | 7_3:+13619770 | Msa1093580:CDS |
| AGGGGTAATCAAAATACTGG+TGG | 0.642235 | 7_3:+13619938 | Msa1093580:CDS |
| GTTAGGATACTCTTAGAATG+TGG | 0.643303 | 7_3:+13619284 | Msa1093580:CDS |
| CTCATGTTAGCAGCAAGGGA+AGG | 0.644540 | 7_3:+13620070 | Msa1093580:CDS |
| GCGAAGTTGACATCAACAGA+AGG | 0.645408 | 7_3:-13616136 | None:intergenic |
| CTTCTACAAGCCTCCCACTC+CGG | 0.650889 | 7_3:+13616079 | Msa1093580:CDS |
| CAATTGCCGAGTCGTACAAG+TGG | 0.652112 | 7_3:+13619561 | Msa1093580:CDS |
| CACTGCTTGTTGAAAACCAT+AGG | 0.653989 | 7_3:-13619585 | None:intergenic |
| TATCCTTTGTGGCAATGTCG+AGG | 0.654180 | 7_3:+13619259 | Msa1093580:CDS |
| GGTATTAAACTTGTAACGAG+AGG | 0.654806 | 7_3:+13620538 | Msa1093580:CDS |
| TTACACTGTGCAGCTCGTCG+TGG | 0.660221 | 7_3:+13619971 | Msa1093580:CDS |
| ACTACAGAATGGTGCTACGA+CGG | 0.661827 | 7_3:+13619037 | Msa1093580:intron |
| GTCATTGTTGGTGAGTGCGG+CGG | 0.663572 | 7_3:-13615998 | None:intergenic |
| ATAGGACCACTTGTACGACT+CGG | 0.667303 | 7_3:-13619567 | None:intergenic |
| CGTAGAAATAGGCACAACAC+AGG | 0.667404 | 7_3:+13620412 | Msa1093580:CDS |
| AACTGGCGAAGAACTTCGTG+TGG | 0.670473 | 7_3:+13619100 | Msa1093580:CDS |
| AGATAGGTGAGCATGCGCCA+CGG | 0.671055 | 7_3:-13615950 | None:intergenic |
| TTGTGAAGAAGCTCTTCTGG+AGG | 0.676266 | 7_3:+13617937 | Msa1093580:CDS |
| CTAAGGACAGATCGCCGGAG+TGG | 0.676625 | 7_3:-13616093 | None:intergenic |
| TTGCAACTACTGCAGCAGTG+AGG | 0.677688 | 7_3:+13617858 | Msa1093580:CDS |
| GAGACGCCATGTGTACAGGA+AGG | 0.685160 | 7_3:-13619352 | None:intergenic |
| GCTTACTAATAAGAATAGGG+AGG | 0.702981 | 7_3:+13620465 | Msa1093580:CDS |
| TGTGAATGTTCCAGATGGGG+AGG | 0.702989 | 7_3:+13620036 | Msa1093580:CDS |
| GTGTCTCAAAGTACTAACAA+GGG | 0.718421 | 7_3:+13619490 | Msa1093580:CDS |
| AGATGATAGTGGTTTCTCAG+CGG | 0.723493 | 7_3:+13619748 | Msa1093580:CDS |
| AGAGCGTGTACAGCAATATG+CGG | 0.731066 | 7_3:-13618019 | None:intergenic |
| ACTGGCGAAGAACTTCGTGT+GGG | 0.731967 | 7_3:+13619101 | Msa1093580:CDS |
| GCCCGTAAACTGGTACTAGG+CGG | 0.752401 | 7_3:+13620235 | Msa1093580:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTATTTTATATAAGTG+GGG | - | chr7_3:13617448-13617467 | None:intergenic | 10.0% |
| !! | AATAAATAAAAAATCTTGTT+AGG | + | chr7_3:13617744-13617763 | Msa1093580:intron | 10.0% |
| !! | ATAAATAAAAAATCTTGTTA+GGG | + | chr7_3:13617745-13617764 | Msa1093580:intron | 10.0% |
| !! | ATATGTGATTACATTTAATT+AGG | + | chr7_3:13616710-13616729 | Msa1093580:intron | 15.0% |
| !!! | TTTTAAGGAAAATTTCAAAA+TGG | + | chr7_3:13616844-13616863 | Msa1093580:intron | 15.0% |
| !!! | AACCAAAAAAATTGTTATTT+TGG | - | chr7_3:13617297-13617316 | None:intergenic | 15.0% |
| !! | AGTTTCATAATATTATTAGA+GGG | - | chr7_3:13618279-13618298 | None:intergenic | 15.0% |
| !! | TAGTTTCATAATATTATTAG+AGG | - | chr7_3:13618280-13618299 | None:intergenic | 15.0% |
| !!! | AATTTGAGATATTTTTTCAA+TGG | + | chr7_3:13618431-13618450 | Msa1093580:intron | 15.0% |
| !!! | TTCAATTTCAACTGTTTTAT+TGG | + | chr7_3:13616357-13616376 | Msa1093580:intron | 20.0% |
| !!! | CTATTTGTTTTGAAAAATGA+TGG | + | chr7_3:13616425-13616444 | Msa1093580:intron | 20.0% |
| !!! | TGAATGAATATTTTCTGAAA+TGG | + | chr7_3:13616615-13616634 | Msa1093580:intron | 20.0% |
| !!! | ACTTTTACTTTATGTTGATT+TGG | + | chr7_3:13616973-13616992 | Msa1093580:intron | 20.0% |
| !!! | GAATTTTTTAGCCATAAAAA+AGG | - | chr7_3:13617018-13617037 | None:intergenic | 20.0% |
| !! | AGAAAAATGTATTGTCAAAA+GGG | - | chr7_3:13617070-13617089 | None:intergenic | 20.0% |
| !! | TAGAAAAATGTATTGTCAAA+AGG | - | chr7_3:13617071-13617090 | None:intergenic | 20.0% |
| !! | AAAATGAATTGCAAAGAAAA+TGG | + | chr7_3:13617140-13617159 | Msa1093580:intron | 20.0% |
| !!! | GTCCAAAATAACAATTTTTT+TGG | + | chr7_3:13617292-13617311 | Msa1093580:intron | 20.0% |
| !! | CATTATATGTTTATGTTCAA+TGG | - | chr7_3:13617381-13617400 | None:intergenic | 20.0% |
| !! | AATAAAGCTGAGATATAATA+AGG | - | chr7_3:13617537-13617556 | None:intergenic | 20.0% |
| !!! | AGCTTTTACAAAAATTACAA+TGG | + | chr7_3:13617602-13617621 | Msa1093580:intron | 20.0% |
| !! | TTTCAATACTTCAAACAAAT+TGG | + | chr7_3:13617713-13617732 | Msa1093580:intron | 20.0% |
| !!! | TGATTATAGAGATTTTGTAA+TGG | + | chr7_3:13618117-13618136 | Msa1093580:intron | 20.0% |
| !!! | ATTGTTTTTTCCCTATTATT+TGG | + | chr7_3:13618177-13618196 | Msa1093580:intron | 20.0% |
| !! | GTTTCATAATATTATTAGAG+GGG | - | chr7_3:13618278-13618297 | None:intergenic | 20.0% |
| !! | TAAAACTACAAATAATAAGC+TGG | - | chr7_3:13618373-13618392 | None:intergenic | 20.0% |
| !!! | TTATTTGTAGTTTTAGCTTA+CGG | + | chr7_3:13618378-13618397 | Msa1093580:intron | 20.0% |
| !! | TTTATTGCATAACTTTACAT+CGG | - | chr7_3:13619834-13619853 | None:intergenic | 20.0% |
| !! | GAACTGTAATTTATTTGAAA+AGG | + | chr7_3:13619892-13619911 | Msa1093580:CDS | 20.0% |
| !! | TGAAATTAAAAGCTTACAAA+GGG | - | chr7_3:13620104-13620123 | None:intergenic | 20.0% |
| !! | ATGAAATTAAAAGCTTACAA+AGG | - | chr7_3:13620105-13620124 | None:intergenic | 20.0% |
| !!! | TGTAAGCTTTTAATTTCATA+CGG | + | chr7_3:13620106-13620125 | Msa1093580:CDS | 20.0% |
| ! | ACATCTAATCGAAAATGTTT+CGG | + | chr7_3:13616676-13616695 | Msa1093580:intron | 25.0% |
| !! | TCTGAGTGAATAGTTTTTAA+AGG | + | chr7_3:13616757-13616776 | Msa1093580:intron | 25.0% |
| !! | CTGAGTGAATAGTTTTTAAA+GGG | + | chr7_3:13616758-13616777 | Msa1093580:intron | 25.0% |
| !!! | TGAGTGAATAGTTTTTAAAG+GGG | + | chr7_3:13616759-13616778 | Msa1093580:intron | 25.0% |
| ! | GAATTTCATCTTCAAAGTAA+CGG | + | chr7_3:13616887-13616906 | Msa1093580:intron | 25.0% |
| ! | AATTTCATCTTCAAAGTAAC+GGG | + | chr7_3:13616888-13616907 | Msa1093580:intron | 25.0% |
| !!! | TCACTTTTTCTCCTTTTTTA+TGG | + | chr7_3:13617004-13617023 | Msa1093580:intron | 25.0% |
| ! | GAAAAATGTATTGTCAAAAG+GGG | - | chr7_3:13617069-13617088 | None:intergenic | 25.0% |
| ! | AAATAATACACTCAACAATC+AGG | - | chr7_3:13617222-13617241 | None:intergenic | 25.0% |
| !! | GATTGTTGAGTGTATTATTT+TGG | + | chr7_3:13617222-13617241 | Msa1093580:intron | 25.0% |
| !!! | TGTATTATTTTGGTTGCATT+AGG | + | chr7_3:13617232-13617251 | Msa1093580:intron | 25.0% |
| !! | GTTTGCTACTAAAAACAAAA+AGG | - | chr7_3:13617321-13617340 | None:intergenic | 25.0% |
| ! | ATATGTTTATGTTCAATGGT+CGG | - | chr7_3:13617377-13617396 | None:intergenic | 25.0% |
| !!! | TCAGCTTTATTTTTGTATCA+CGG | + | chr7_3:13617546-13617565 | Msa1093580:intron | 25.0% |
| ! | TAAATGCATATTTGGTATCA+CGG | - | chr7_3:13617652-13617671 | None:intergenic | 25.0% |
| ! | TATCAGACTAAATGCATATT+TGG | - | chr7_3:13617660-13617679 | None:intergenic | 25.0% |
| !!! | TGTTTGAAGTATTGAAAAGT+AGG | - | chr7_3:13617710-13617729 | None:intergenic | 25.0% |
| !! | TTTTAACGTGCCAAATAATA+GGG | - | chr7_3:13618190-13618209 | None:intergenic | 25.0% |
| !! | TTTTTAACGTGCCAAATAAT+AGG | - | chr7_3:13618191-13618210 | None:intergenic | 25.0% |
| ! | TGAAAGCTAAATAATACTCA+AGG | - | chr7_3:13618309-13618328 | None:intergenic | 25.0% |
| !! | CATGTTTATTTAGAATCCTA+TGG | - | chr7_3:13618336-13618355 | None:intergenic | 25.0% |
| !! | ATATATTGGCTATAACAACT+AGG | - | chr7_3:13618680-13618699 | None:intergenic | 25.0% |
| ! | TTAAACACTAACAATGAAGT+AGG | - | chr7_3:13618901-13618920 | None:intergenic | 25.0% |
| ! | TTTACAAATGAACTACAGAA+TGG | + | chr7_3:13619026-13619045 | Msa1093580:intron | 25.0% |
| !!! | GTTGAGTATTTTGAAAAAAG+TGG | + | chr7_3:13619164-13619183 | Msa1093580:CDS | 25.0% |
| ! | AATCACAACCAAAATCAATT+AGG | - | chr7_3:13619406-13619425 | None:intergenic | 25.0% |
| ! | TTGTGCAAAATATAAACAAG+AGG | + | chr7_3:13619466-13619485 | Msa1093580:CDS | 25.0% |
| ! | CTTAGATACAAAAATCAAAG+GGG | - | chr7_3:13619666-13619685 | None:intergenic | 25.0% |
| ! | CCTTAGATACAAAAATCAAA+GGG | - | chr7_3:13619667-13619686 | None:intergenic | 25.0% |
| ! | GTAAAGTTATGCAATAAATC+TGG | + | chr7_3:13619836-13619855 | Msa1093580:CDS | 25.0% |
| AAACAGTTGAAATTGAAGCA+CGG | - | chr7_3:13616354-13616373 | None:intergenic | 30.0% | |
| ! | TGCAATTCTTCTAATGCTTT+TGG | + | chr7_3:13616503-13616522 | Msa1093580:intron | 30.0% |
| AATGTAATCACATATGTCAC+TGG | - | chr7_3:13616705-13616724 | None:intergenic | 30.0% | |
| !!! | TTTTGAATTACCGATTCGTT+TGG | - | chr7_3:13616802-13616821 | None:intergenic | 30.0% |
| !!! | GTGTGTGTGTGTTTTTTTTA+AGG | + | chr7_3:13616829-13616848 | Msa1093580:intron | 30.0% |
| ATTTCATCTTCAAAGTAACG+GGG | + | chr7_3:13616889-13616908 | Msa1093580:intron | 30.0% | |
| AAAAGGAGAAAAAGTGAAGT+GGG | - | chr7_3:13617001-13617020 | None:intergenic | 30.0% | |
| AAAAAGGAGAAAAAGTGAAG+TGG | - | chr7_3:13617002-13617021 | None:intergenic | 30.0% | |
| TATGTTTATGTTCAATGGTC+GGG | - | chr7_3:13617376-13617395 | None:intergenic | 30.0% | |
| !!! | CTTTATTTTTGTATCACGGT+GGG | + | chr7_3:13617550-13617569 | Msa1093580:intron | 30.0% |
| TTAGGGATATAAATTACTCC+AGG | + | chr7_3:13617762-13617781 | Msa1093580:intron | 30.0% | |
| TTGAGACCTTAATTAATGCA+GGG | + | chr7_3:13617900-13617919 | Msa1093580:CDS | 30.0% | |
| TATTTGGCACGTTAAAAAGT+AGG | + | chr7_3:13618193-13618212 | Msa1093580:intron | 30.0% | |
| ATTTGGCACGTTAAAAAGTA+GGG | + | chr7_3:13618194-13618213 | Msa1093580:intron | 30.0% | |
| ATATTATTAGAGGGGATGTT+GGG | - | chr7_3:13618270-13618289 | None:intergenic | 30.0% | |
| AATATTATTAGAGGGGATGT+TGG | - | chr7_3:13618271-13618290 | None:intergenic | 30.0% | |
| ! | GTTTATTTAGAATCCTATGG+AGG | - | chr7_3:13618333-13618352 | None:intergenic | 30.0% |
| !!! | TAGTTTTAGCTTACGGTTAT+TGG | + | chr7_3:13618385-13618404 | Msa1093580:intron | 30.0% |
| TACGGTTATTGGTAAATACT+TGG | + | chr7_3:13618396-13618415 | Msa1093580:intron | 30.0% | |
| !!! | ATATTTTTTCAATGGCAGTG+TGG | + | chr7_3:13618439-13618458 | Msa1093580:intron | 30.0% |
| TAAGAGAAAAGTTTACCTGA+AGG | - | chr7_3:13618591-13618610 | None:intergenic | 30.0% | |
| TTGCAAAAGCAAGGATATAT+TGG | - | chr7_3:13618694-13618713 | None:intergenic | 30.0% | |
| TGACCTCAACTTATTAAAAC+TGG | + | chr7_3:13618818-13618837 | Msa1093580:intron | 30.0% | |
| !! | TCTCCAGTTTTAATAAGTTG+AGG | - | chr7_3:13618824-13618843 | None:intergenic | 30.0% |
| ACTAACAATGAAGTAGGAAT+CGG | - | chr7_3:13618895-13618914 | None:intergenic | 30.0% | |
| AAGAAAAAAAAAACCTAGCG+AGG | - | chr7_3:13619007-13619026 | None:intergenic | 30.0% | |
| !! | TCTCAATGCCTAATTGATTT+TGG | + | chr7_3:13619395-13619414 | Msa1093580:CDS | 30.0% |
| ! | TTTTGCACAAATCATCAAAG+CGG | - | chr7_3:13619456-13619475 | None:intergenic | 30.0% |
| !! | CCCTTTGATTTTTGTATCTA+AGG | + | chr7_3:13619664-13619683 | Msa1093580:CDS | 30.0% |
| GCCTTAGATACAAAAATCAA+AGG | - | chr7_3:13619668-13619687 | None:intergenic | 30.0% | |
| !! | TTGATTTTTGTATCTAAGGC+AGG | + | chr7_3:13619668-13619687 | Msa1093580:CDS | 30.0% |
| ! | AATGACAGTTTTCAAAGCTT+CGG | - | chr7_3:13619699-13619718 | None:intergenic | 30.0% |
| TTGAAAACTGTCATTGAATC+TGG | + | chr7_3:13619704-13619723 | Msa1093580:CDS | 30.0% | |
| TGCTTGAATTTACACTTGAA+AGG | + | chr7_3:13619918-13619937 | Msa1093580:CDS | 30.0% | |
| GCTTGAATTTACACTTGAAA+GGG | + | chr7_3:13619919-13619938 | Msa1093580:CDS | 30.0% | |
| CTTGAATTTACACTTGAAAG+GGG | + | chr7_3:13619920-13619939 | Msa1093580:CDS | 30.0% | |
| TGTAATGCTAAAAATGCAAG+AGG | + | chr7_3:13620136-13620155 | Msa1093580:CDS | 30.0% | |
| GAATTTCTTTGCAAGTAGAA+GGG | - | chr7_3:13620170-13620189 | None:intergenic | 30.0% | |
| TACGTAATTGTTTCACATGT+GGG | - | chr7_3:13620300-13620319 | None:intergenic | 30.0% | |
| ATACGTAATTGTTTCACATG+TGG | - | chr7_3:13620301-13620320 | None:intergenic | 30.0% | |
| GGTGCTTACTAATAAGAATA+GGG | + | chr7_3:13620462-13620481 | Msa1093580:CDS | 30.0% | |
| GTTTACTGGGAAAATCTGTT+TGG | - | chr7_3:13616035-13616054 | None:intergenic | 35.0% | |
| !!! | GCTTTTTGTTGTTGTTGTTG+TGG | + | chr7_3:13616379-13616398 | Msa1093580:intron | 35.0% |
| TAATCTTAACCTCTGTAGCA+TGG | + | chr7_3:13616651-13616670 | Msa1093580:intron | 35.0% | |
| TGTTAGAGATCCAAACGAAT+CGG | + | chr7_3:13616789-13616808 | Msa1093580:intron | 35.0% | |
| AAATCCATCAATAAACGCGA+AGG | - | chr7_3:13616942-13616961 | None:intergenic | 35.0% | |
| AAAGGAGAAAAAGTGAAGTG+GGG | - | chr7_3:13617000-13617019 | None:intergenic | 35.0% | |
| GGGGACATATAATAATGTGA+AGG | - | chr7_3:13617050-13617069 | None:intergenic | 35.0% | |
| ! | CTCGCTTTAGATATAGAAGT+AGG | - | chr7_3:13617101-13617120 | None:intergenic | 35.0% |
| ! | CTACTTCTATATCTAAAGCG+AGG | + | chr7_3:13617099-13617118 | Msa1093580:intron | 35.0% |
| !!! | GCTTTATTTTTGTATCACGG+TGG | + | chr7_3:13617549-13617568 | Msa1093580:intron | 35.0% |
| ! | TTTTTGTAAAAGCTACACGC+TGG | - | chr7_3:13617596-13617615 | None:intergenic | 35.0% |
| GGTAAGTTTCCAAAATTCAC+GGG | - | chr7_3:13617631-13617650 | None:intergenic | 35.0% | |
| CGGTAAGTTTCCAAAATTCA+CGG | - | chr7_3:13617632-13617651 | None:intergenic | 35.0% | |
| AATTACTCCAGGCTATTAAC+AGG | + | chr7_3:13617773-13617792 | Msa1093580:intron | 35.0% | |
| AAATCAACCTGTTAATAGCC+TGG | - | chr7_3:13617783-13617802 | None:intergenic | 35.0% | |
| TTCTTGAAATGACAGAGTGT+TGG | + | chr7_3:13617803-13617822 | Msa1093580:intron | 35.0% | |
| AGGTCTCAAGAATATCAAGA+TGG | - | chr7_3:13617889-13617908 | None:intergenic | 35.0% | |
| CTTGAGACCTTAATTAATGC+AGG | + | chr7_3:13617899-13617918 | Msa1093580:CDS | 35.0% | |
| TGAGACCTTAATTAATGCAG+GGG | + | chr7_3:13617901-13617920 | Msa1093580:CDS | 35.0% | |
| AAAACAATTGCAGATGCTTC+AGG | - | chr7_3:13618165-13618184 | None:intergenic | 35.0% | |
| CTAGGAAGAAGACAATATCA+TGG | - | chr7_3:13618221-13618240 | None:intergenic | 35.0% | |
| TGATATTGTCTTCTTCCTAG+AGG | + | chr7_3:13618221-13618240 | Msa1093580:intron | 35.0% | |
| TATTATTAGAGGGGATGTTG+GGG | - | chr7_3:13618269-13618288 | None:intergenic | 35.0% | |
| !! | ATTTAGCTTTCATCCTCCAT+AGG | + | chr7_3:13618317-13618336 | Msa1093580:intron | 35.0% |
| CATTACAATCCACATTTGTG+TGG | - | chr7_3:13618519-13618538 | None:intergenic | 35.0% | |
| TGGTAATCAAAGGTTTGAAG+CGG | - | chr7_3:13618615-13618634 | None:intergenic | 35.0% | |
| CTAACTGAACTGGTAATCAA+AGG | - | chr7_3:13618625-13618644 | None:intergenic | 35.0% | |
| CTTTGATTACCAGTTCAGTT+AGG | + | chr7_3:13618623-13618642 | Msa1093580:intron | 35.0% | |
| TCTTGTTAACCTAACTGAAC+TGG | - | chr7_3:13618635-13618654 | None:intergenic | 35.0% | |
| GATGGAAAATTGCAAAAGCA+AGG | - | chr7_3:13618703-13618722 | None:intergenic | 35.0% | |
| ATGTAACAGTAGTTCACAGA+TGG | - | chr7_3:13618721-13618740 | None:intergenic | 35.0% | |
| GTGATTCAATATCGCTTGAT+GGG | - | chr7_3:13618779-13618798 | None:intergenic | 35.0% | |
| !! | ATTTTGTTATCAGTCTGCCA+AGG | + | chr7_3:13618843-13618862 | Msa1093580:intron | 35.0% |
| CCTAACATCATTAAAAGAGG+TGG | - | chr7_3:13618872-13618891 | None:intergenic | 35.0% | |
| ! | CCACCTCTTTTAATGATGTT+AGG | + | chr7_3:13618869-13618888 | Msa1093580:intron | 35.0% |
| !! | TGATTAGTTAGCTCTGTTGA+TGG | + | chr7_3:13618925-13618944 | Msa1093580:intron | 35.0% |
| !! | TCTGTTGATGGTCTCATAAT+TGG | + | chr7_3:13618937-13618956 | Msa1093580:intron | 35.0% |
| ! | CAACTAGAAATGATAGTGAG+AGG | - | chr7_3:13618969-13618988 | None:intergenic | 35.0% |
| !!! | AATTTTAACTGATCCTCGCT+AGG | + | chr7_3:13618991-13619010 | Msa1093580:intron | 35.0% |
| ! | AACTATTTGAGACATGTTGC+AGG | - | chr7_3:13619208-13619227 | None:intergenic | 35.0% |
| GTCTCAAATAGTTGTCATTG+TGG | + | chr7_3:13619215-13619234 | Msa1093580:CDS | 35.0% | |
| GTTAGGATACTCTTAGAATG+TGG | + | chr7_3:13619284-13619303 | Msa1093580:CDS | 35.0% | |
| !! | ATTAGGCATTGAGATATTGC+AGG | - | chr7_3:13619389-13619408 | None:intergenic | 35.0% |
| ! | AGTGTCTCAAAGTACTAACA+AGG | + | chr7_3:13619489-13619508 | Msa1093580:CDS | 35.0% |
| ! | GTGTCTCAAAGTACTAACAA+GGG | + | chr7_3:13619490-13619509 | Msa1093580:CDS | 35.0% |
| !! | GTGGTGGATGTAATTAGAAA+TGG | + | chr7_3:13619605-13619624 | Msa1093580:CDS | 35.0% |
| !! | GTAGAAGTATTGCTGGATTT+GGG | - | chr7_3:13619638-13619657 | None:intergenic | 35.0% |
| !! | AGTAGAAGTATTGCTGGATT+TGG | - | chr7_3:13619639-13619658 | None:intergenic | 35.0% |
| !! | GGAAAAAGTAGAAGTATTGC+TGG | - | chr7_3:13619645-13619664 | None:intergenic | 35.0% |
| CTTGACTATCAAGATGATAG+TGG | + | chr7_3:13619737-13619756 | Msa1093580:CDS | 35.0% | |
| TTTCGATTGCTTGTATATGC+TGG | + | chr7_3:13619806-13619825 | Msa1093580:CDS | 35.0% | |
| GAAAGGGGTAATCAAAATAC+TGG | + | chr7_3:13619935-13619954 | Msa1093580:CDS | 35.0% | |
| ATTCACATCAAAACCTTTGC+TGG | - | chr7_3:13620023-13620042 | None:intergenic | 35.0% | |
| TTTGATGTGAATGTTCCAGA+TGG | + | chr7_3:13620031-13620050 | Msa1093580:CDS | 35.0% | |
| TTGATGTGAATGTTCCAGAT+GGG | + | chr7_3:13620032-13620051 | Msa1093580:CDS | 35.0% | |
| CGAATTTCTTTGCAAGTAGA+AGG | - | chr7_3:13620171-13620190 | None:intergenic | 35.0% | |
| TTGCAAAGAAATTCGCAGAA+GGG | + | chr7_3:13620176-13620195 | Msa1093580:CDS | 35.0% | |
| ! | TTTTGTGTGCTTCTGAACAT+AGG | - | chr7_3:13620263-13620282 | None:intergenic | 35.0% |
| ! | TTCAGAAGCACACAAAATGT+GGG | + | chr7_3:13620266-13620285 | Msa1093580:CDS | 35.0% |
| GGGTGCTTACTAATAAGAAT+AGG | + | chr7_3:13620461-13620480 | Msa1093580:CDS | 35.0% | |
| GCTTACTAATAAGAATAGGG+AGG | + | chr7_3:13620465-13620484 | Msa1093580:CDS | 35.0% | |
| GGTATTAAACTTGTAACGAG+AGG | + | chr7_3:13620538-13620557 | Msa1093580:CDS | 35.0% | |
| GTGGAGAATACTGTCATTGT+TGG | - | chr7_3:13616013-13616032 | None:intergenic | 40.0% | |
| TACTGGGAAAATCTGTTTGG+TGG | - | chr7_3:13616032-13616051 | None:intergenic | 40.0% | |
| CTTCGGTTTCGTAGTTTACT+GGG | - | chr7_3:13616048-13616067 | None:intergenic | 40.0% | |
| ACTTCGGTTTCGTAGTTTAC+TGG | - | chr7_3:13616049-13616068 | None:intergenic | 40.0% | |
| GTTGACATCAACAGAAGGAT+CGG | - | chr7_3:13616134-13616153 | None:intergenic | 40.0% | |
| ACTCTTCAAACTAACAGCTC+CGG | - | chr7_3:13616161-13616180 | None:intergenic | 40.0% | |
| TCGAGTTTGTGTTGAGTTTC+AGG | + | chr7_3:13616219-13616238 | Msa1093580:CDS | 40.0% | |
| GCATGAACAGCAAGAAAAAG+AGG | - | chr7_3:13616265-13616284 | None:intergenic | 40.0% | |
| !!! | CTTTTTCTTGCTGTTCATGC+TGG | + | chr7_3:13616265-13616284 | Msa1093580:CDS | 40.0% |
| !! | TGAGCTTGTTAGGAAGTTAC+TGG | + | chr7_3:13616294-13616313 | Msa1093580:CDS | 40.0% |
| GTAATCACTTCGTCATTGCT+CGG | + | chr7_3:13616316-13616335 | Msa1093580:intron | 40.0% | |
| GAAACCTTCGCGTTTATTGA+TGG | + | chr7_3:13616935-13616954 | Msa1093580:intron | 40.0% | |
| ATTAGGCCATGATTGTTGAG+AGG | + | chr7_3:13617249-13617268 | Msa1093580:intron | 40.0% | |
| ACTCATCCTCTCAACAATCA+TGG | - | chr7_3:13617258-13617277 | None:intergenic | 40.0% | |
| GTAAACCAAAAGCTCTTCAG+AGG | + | chr7_3:13617833-13617852 | Msa1093580:CDS | 40.0% | |
| TGTGGTTGAGACACTCATAA+AGG | + | chr7_3:13618072-13618091 | Msa1093580:CDS | 40.0% | |
| ATTATTAGAGGGGATGTTGG+GGG | - | chr7_3:13618268-13618287 | None:intergenic | 40.0% | |
| CAAATAATAAGCTGGAGCAC+TGG | - | chr7_3:13618365-13618384 | None:intergenic | 40.0% | |
| !! | TAAGTGACTGTAAAAGCACC+CGG | - | chr7_3:13618486-13618505 | None:intergenic | 40.0% |
| TAGTTGCAGCTGTAGTTCAT+AGG | + | chr7_3:13618542-13618561 | Msa1093580:CDS | 40.0% | |
| CGTGATTCAATATCGCTTGA+TGG | - | chr7_3:13618780-13618799 | None:intergenic | 40.0% | |
| CGGCCTAACATCATTAAAAG+AGG | - | chr7_3:13618875-13618894 | None:intergenic | 40.0% | |
| !!! | CTACGACGGATTTTGAAGTA+AGG | + | chr7_3:13619051-13619070 | Msa1093580:CDS | 40.0% |
| !!! | ACGGATTTTGAAGTAAGGCT+TGG | + | chr7_3:13619056-13619075 | Msa1093580:CDS | 40.0% |
| AAAATACTCAACTGCACACC+AGG | - | chr7_3:13619156-13619175 | None:intergenic | 40.0% | |
| ! | CTTAGAATGTGGTGCTAATG+TGG | + | chr7_3:13619295-13619314 | Msa1093580:CDS | 40.0% |
| !!! | CTTGCTGGTTGTTTTGACAA+GGG | - | chr7_3:13619324-13619343 | None:intergenic | 40.0% |
| !!! | TCTTGCTGGTTGTTTTGACA+AGG | - | chr7_3:13619325-13619344 | None:intergenic | 40.0% |
| ! | CACTGCTTGTTGAAAACCAT+AGG | - | chr7_3:13619588-13619607 | None:intergenic | 40.0% |
| ! | CTATGGTTTTCAACAAGCAG+TGG | + | chr7_3:13619586-13619605 | Msa1093580:CDS | 40.0% |
| !! | AGATGATAGTGGTTTCTCAG+CGG | + | chr7_3:13619748-13619767 | Msa1093580:CDS | 40.0% |
| GCTATGCATACAGCTATGAA+AGG | + | chr7_3:13619770-13619789 | Msa1093580:CDS | 40.0% | |
| AGGGGTAATCAAAATACTGG+TGG | + | chr7_3:13619938-13619957 | Msa1093580:CDS | 40.0% | |
| TGATGTGAATGTTCCAGATG+GGG | + | chr7_3:13620033-13620052 | Msa1093580:CDS | 40.0% | |
| AAAGCTTACAAAGGGATGCA+TGG | - | chr7_3:13620096-13620115 | None:intergenic | 40.0% | |
| CTTGCAAAGAAATTCGCAGA+AGG | + | chr7_3:13620175-13620194 | Msa1093580:CDS | 40.0% | |
| ! | GTTCAGAAGCACACAAAATG+TGG | + | chr7_3:13620265-13620284 | Msa1093580:CDS | 40.0% |
| AAGCACACAAAATGTGGGAA+GGG | + | chr7_3:13620271-13620290 | Msa1093580:CDS | 40.0% | |
| TTACGTATGTTGCGTTCTTC+AGG | + | chr7_3:13620313-13620332 | Msa1093580:CDS | 40.0% | |
| ! | TTCTTCAGGTGTGCTTTGTT+GGG | + | chr7_3:13620327-13620346 | Msa1093580:CDS | 40.0% |
| TTTCTACGCAATGTTGAGCT+TGG | - | chr7_3:13620400-13620419 | None:intergenic | 40.0% | |
| GCTCAACATTGCGTAGAAAT+AGG | + | chr7_3:13620401-13620420 | Msa1093580:CDS | 40.0% | |
| AGAAGAACCTGGATTGTTCA+GGG | + | chr7_3:13620441-13620460 | Msa1093580:CDS | 40.0% | |
| ! | ACTGTCATTGTTGGTGAGTG+CGG | - | chr7_3:13616004-13616023 | None:intergenic | 45.0% |
| !! | TAGAAGGCGTTGTGAGACTT+CGG | - | chr7_3:13616065-13616084 | None:intergenic | 45.0% |
| GCGAAGTTGACATCAACAGA+AGG | - | chr7_3:13616139-13616158 | None:intergenic | 45.0% | |
| TCTGTTGATGTCAACTTCGC+CGG | + | chr7_3:13616139-13616158 | Msa1093580:CDS | 45.0% | |
| ! | CTGGAAATGCTGAGCTTGTT+AGG | + | chr7_3:13616284-13616303 | Msa1093580:CDS | 45.0% |
| TAGATGTGTCCATGCTACAG+AGG | - | chr7_3:13616663-13616682 | None:intergenic | 45.0% | |
| ! | TCATCTTCAAAGTAACGGGG+TGG | + | chr7_3:13616892-13616911 | Msa1093580:intron | 45.0% |
| ATATAAGTGGGGCCTGAAGA+GGG | - | chr7_3:13617437-13617456 | None:intergenic | 45.0% | |
| TATATAAGTGGGGCCTGAAG+AGG | - | chr7_3:13617438-13617457 | None:intergenic | 45.0% | |
| !! | CGGTGGGTTTGTTGAAATCA+CGG | + | chr7_3:13617566-13617585 | Msa1093580:intron | 45.0% |
| ! | CAATGGCTACCCGTGAATTT+TGG | + | chr7_3:13617619-13617638 | Msa1093580:intron | 45.0% |
| !! | CAAAGCCTCTGAAGAGCTTT+TGG | - | chr7_3:13617841-13617860 | None:intergenic | 45.0% |
| GGATGCCCCTGCATTAATTA+AGG | - | chr7_3:13617909-13617928 | None:intergenic | 45.0% | |
| AGAAGAGCTTCTTCACAAGC+TGG | - | chr7_3:13617935-13617954 | None:intergenic | 45.0% | |
| AGCTTGTGAAGAAGCTCTTC+TGG | + | chr7_3:13617934-13617953 | Msa1093580:CDS | 45.0% | |
| TTGTGAAGAAGCTCTTCTGG+AGG | + | chr7_3:13617937-13617956 | Msa1093580:CDS | 45.0% | |
| ! | TTCTGGAGGCAAGTTACCAT+GGG | + | chr7_3:13617951-13617970 | Msa1093580:CDS | 45.0% |
| AGAGCGTGTACAGCAATATG+CGG | - | chr7_3:13618022-13618041 | None:intergenic | 45.0% | |
| TATTGCTGTACACGCTCTTG+TGG | + | chr7_3:13618024-13618043 | Msa1093580:CDS | 45.0% | |
| TTGTCTTCTTCCTAGAGGCT+TGG | + | chr7_3:13618226-13618245 | Msa1093580:intron | 45.0% | |
| TGTCTTCTTCCTAGAGGCTT+GGG | + | chr7_3:13618227-13618246 | Msa1093580:intron | 45.0% | |
| TCCACATTTGTGTGGAGAGA+AGG | - | chr7_3:13618511-13618530 | None:intergenic | 45.0% | |
| GAAGGAGCAAACTGACAACA+TGG | - | chr7_3:13618573-13618592 | None:intergenic | 45.0% | |
| ! | TGTTGTCAGTTTGCTCCTTC+AGG | + | chr7_3:13618573-13618592 | Msa1093580:CDS | 45.0% |
| ATTAAAAGAGGTGGCTGCCT+TGG | - | chr7_3:13618863-13618882 | None:intergenic | 45.0% | |
| !! | ACTACAGAATGGTGCTACGA+CGG | + | chr7_3:13619037-13619056 | Msa1093580:intron | 45.0% |
| TTGAAGTAAGGCTTGGAGCA+TGG | + | chr7_3:13619063-13619082 | Msa1093580:CDS | 45.0% | |
| TGGTCATGGGATAATGCAAC+TGG | + | chr7_3:13619083-13619102 | Msa1093580:CDS | 45.0% | |
| CTACACCATGCTATCCTTTG+TGG | + | chr7_3:13619248-13619267 | Msa1093580:CDS | 45.0% | |
| CATTGCCACAAAGGATAGCA+TGG | - | chr7_3:13619256-13619275 | None:intergenic | 45.0% | |
| TATCCTTTGTGGCAATGTCG+AGG | + | chr7_3:13619259-13619278 | Msa1093580:CDS | 45.0% | |
| CATGTGTACAGGAAGGAACT+CGG | - | chr7_3:13619348-13619367 | None:intergenic | 45.0% | |
| TTGAACTCTCGAACAGACTC+TGG | + | chr7_3:13619425-13619444 | Msa1093580:CDS | 45.0% | |
| ! | CTCAAAGTACTAACAAGGGC+TGG | + | chr7_3:13619494-13619513 | Msa1093580:CDS | 45.0% |
| ATAGGACCACTTGTACGACT+CGG | - | chr7_3:13619570-13619589 | None:intergenic | 45.0% | |
| ! | TGGTTTTCAACAAGCAGTGG+TGG | + | chr7_3:13619589-13619608 | Msa1093580:CDS | 45.0% |
| GTTACATTGCTGACCAGCAA+AGG | + | chr7_3:13620007-13620026 | Msa1093580:CDS | 45.0% | |
| TCCACTCATGTTAGCAGCAA+GGG | + | chr7_3:13620066-13620085 | Msa1093580:CDS | 45.0% | |
| AGAAGGGAAAAACGAAGCAG+AGG | + | chr7_3:13620192-13620211 | Msa1093580:CDS | 45.0% | |
| GAAGGGAAAAACGAAGCAGA+GGG | + | chr7_3:13620193-13620212 | Msa1093580:CDS | 45.0% | |
| AGATGAACTTGCCCGTAAAC+TGG | + | chr7_3:13620225-13620244 | Msa1093580:CDS | 45.0% | |
| GAAGCACACAAAATGTGGGA+AGG | + | chr7_3:13620270-13620289 | Msa1093580:CDS | 45.0% | |
| GTTCTTCAGGTGTGCTTTGT+TGG | + | chr7_3:13620326-13620345 | Msa1093580:CDS | 45.0% | |
| ! | TCTTCAGGTGTGCTTTGTTG+GGG | + | chr7_3:13620328-13620347 | Msa1093580:CDS | 45.0% |
| CGTAGAAATAGGCACAACAC+AGG | + | chr7_3:13620412-13620431 | Msa1093580:CDS | 45.0% | |
| CAGAAGAACCTGGATTGTTC+AGG | + | chr7_3:13620440-13620459 | Msa1093580:CDS | 45.0% | |
| GAGGTGCATTTCGTATGTGA+GGG | + | chr7_3:13620484-13620503 | Msa1093580:CDS | 45.0% | |
| AGGTGCATTTCGTATGTGAG+GGG | + | chr7_3:13620485-13620504 | Msa1093580:CDS | 45.0% | |
| GTCAGAAGCTGCTAAGCTTT+GGG | + | chr7_3:13620510-13620529 | Msa1093580:CDS | 45.0% | |
| !!! | TTTTTTTATTTTATATAAGT+GGG | - | chr7_3:13617449-13617468 | None:intergenic | 5.0% |
| !!! | ATTTTTTTATTTTATATAAG+TGG | - | chr7_3:13617450-13617469 | None:intergenic | 5.0% |
| !!! | ATTTATAAAAAATCTATTTT+TGG | + | chr7_3:13617471-13617490 | Msa1093580:intron | 5.0% |
| AGGGAGTGGTGGTTAGAGAT+AGG | - | chr7_3:13615969-13615988 | None:intergenic | 50.0% | |
| AAAGGCTAAGGACAGATCGC+CGG | - | chr7_3:13616101-13616120 | None:intergenic | 50.0% | |
| GGAGATGCAGTGAAAGGCTA+AGG | - | chr7_3:13616113-13616132 | None:intergenic | 50.0% | |
| AGGATCGGAGATGCAGTGAA+AGG | - | chr7_3:13616119-13616138 | None:intergenic | 50.0% | |
| TGGTCGGGACAACATGGTAT+GGG | - | chr7_3:13617361-13617380 | None:intergenic | 50.0% | |
| ATGGTCGGGACAACATGGTA+TGG | - | chr7_3:13617362-13617381 | None:intergenic | 50.0% | |
| GTTCAATGGTCGGGACAACA+TGG | - | chr7_3:13617367-13617386 | None:intergenic | 50.0% | |
| TGCATGATGCATCCCTCTTC+AGG | + | chr7_3:13617422-13617441 | Msa1093580:intron | 50.0% | |
| TTGCAACTACTGCAGCAGTG+AGG | + | chr7_3:13617858-13617877 | Msa1093580:CDS | 50.0% | |
| TGCAACTACTGCAGCAGTGA+GGG | + | chr7_3:13617859-13617878 | Msa1093580:CDS | 50.0% | |
| AGCTTCTTCACAAGCTGGCT+GGG | - | chr7_3:13617930-13617949 | None:intergenic | 50.0% | |
| ! | CTTCTGGAGGCAAGTTACCA+TGG | + | chr7_3:13617950-13617969 | Msa1093580:CDS | 50.0% |
| CAAGTTACCATGGGCAAGCA+GGG | + | chr7_3:13617960-13617979 | Msa1093580:CDS | 50.0% | |
| TCAGTTGTACCCAAGCCTCT+AGG | - | chr7_3:13618239-13618258 | None:intergenic | 50.0% | |
| !! | TAATAAGCTGGAGCACTGGC+AGG | - | chr7_3:13618361-13618380 | None:intergenic | 50.0% |
| ! | TTTTCAATGGCAGTGTGGCG+TGG | + | chr7_3:13618444-13618463 | Msa1093580:intron | 50.0% |
| GCCTTCTCTCCACACAAATG+TGG | + | chr7_3:13618507-13618526 | Msa1093580:CDS | 50.0% | |
| TGCAGCTGTAGTTCATAGGC+AGG | + | chr7_3:13618546-13618565 | Msa1093580:CDS | 50.0% | |
| TAAGGCTTGGAGCATGGTCA+TGG | + | chr7_3:13619069-13619088 | Msa1093580:CDS | 50.0% | |
| AAGGCTTGGAGCATGGTCAT+GGG | + | chr7_3:13619070-13619089 | Msa1093580:CDS | 50.0% | |
| AACTGGCGAAGAACTTCGTG+TGG | + | chr7_3:13619100-13619119 | Msa1093580:CDS | 50.0% | |
| ACTGGCGAAGAACTTCGTGT+GGG | + | chr7_3:13619101-13619120 | Msa1093580:CDS | 50.0% | |
| GAGAACCATATGGCATCACC+TGG | + | chr7_3:13619135-13619154 | Msa1093580:CDS | 50.0% | |
| CGAGTTCCTTCCTGTACACA+TGG | + | chr7_3:13619346-13619365 | Msa1093580:CDS | 50.0% | |
| !!! | ACAAGGGCTGGTGCTGATTT+TGG | + | chr7_3:13619506-13619525 | Msa1093580:CDS | 50.0% |
| !! | TTTGGCTTGGTGAACAGTGC+AGG | + | chr7_3:13619524-13619543 | Msa1093580:CDS | 50.0% |
| CAATTGCCGAGTCGTACAAG+TGG | + | chr7_3:13619561-13619580 | Msa1093580:CDS | 50.0% | |
| GAGTCGTACAAGTGGTCCTA+TGG | + | chr7_3:13619569-13619588 | Msa1093580:CDS | 50.0% | |
| TGTGAATGTTCCAGATGGGG+AGG | + | chr7_3:13620036-13620055 | Msa1093580:CDS | 50.0% | |
| CTCCACTCATGTTAGCAGCA+AGG | + | chr7_3:13620065-13620084 | Msa1093580:CDS | 50.0% | |
| TCCCTTGCTGCTAACATGAG+TGG | - | chr7_3:13620070-13620089 | None:intergenic | 50.0% | |
| CTCATGTTAGCAGCAAGGGA+AGG | + | chr7_3:13620070-13620089 | Msa1093580:CDS | 50.0% | |
| CTTGCCCGTAAACTGGTACT+AGG | + | chr7_3:13620232-13620251 | Msa1093580:CDS | 50.0% | |
| ACCGCCTAGTACCAGTTTAC+GGG | - | chr7_3:13620239-13620258 | None:intergenic | 50.0% | |
| CACCGCCTAGTACCAGTTTA+CGG | - | chr7_3:13620240-13620259 | None:intergenic | 50.0% | |
| ACAGGTGATGCAGAAGAACC+TGG | + | chr7_3:13620430-13620449 | Msa1093580:CDS | 50.0% | |
| GTAAGCACCCTGAACAATCC+AGG | - | chr7_3:13620451-13620470 | None:intergenic | 50.0% | |
| ! | GGAGGTGCATTTCGTATGTG+AGG | + | chr7_3:13620483-13620502 | Msa1093580:CDS | 50.0% |
| GGTGCATTTCGTATGTGAGG+GGG | + | chr7_3:13620486-13620505 | Msa1093580:CDS | 50.0% | |
| GTGCATTTCGTATGTGAGGG+GGG | + | chr7_3:13620487-13620506 | Msa1093580:CDS | 50.0% | |
| TGCATTTCGTATGTGAGGGG+GGG | + | chr7_3:13620488-13620507 | Msa1093580:CDS | 50.0% | |
| GGTCAGAAGCTGCTAAGCTT+TGG | + | chr7_3:13620509-13620528 | Msa1093580:CDS | 50.0% | |
| !! | AAGCTGCTAAGCTTTGGGTG+AGG | + | chr7_3:13620515-13620534 | Msa1093580:CDS | 50.0% |
| !! | AGCTGCTAAGCTTTGGGTGA+GGG | + | chr7_3:13620516-13620535 | Msa1093580:CDS | 50.0% |
| AGATAGGTGAGCATGCGCCA+CGG | - | chr7_3:13615953-13615972 | None:intergenic | 55.0% | |
| ! | GTCATTGTTGGTGAGTGCGG+CGG | - | chr7_3:13616001-13616020 | None:intergenic | 55.0% |
| CTTCTACAAGCCTCCCACTC+CGG | + | chr7_3:13616079-13616098 | Msa1093580:CDS | 55.0% | |
| TAAGGACAGATCGCCGGAGT+GGG | - | chr7_3:13616095-13616114 | None:intergenic | 55.0% | |
| CTTCGTCATTGCTCGGATCG+CGG | + | chr7_3:13616323-13616342 | Msa1093580:intron | 55.0% | |
| GGTCGGGACAACATGGTATG+GGG | - | chr7_3:13617360-13617379 | None:intergenic | 55.0% | |
| AACTACTGCAGCAGTGAGGG+AGG | + | chr7_3:13617862-13617881 | Msa1093580:CDS | 55.0% | |
| ACTACTGCAGCAGTGAGGGA+GGG | + | chr7_3:13617863-13617882 | Msa1093580:CDS | 55.0% | |
| GAGCTTCTTCACAAGCTGGC+TGG | - | chr7_3:13617931-13617950 | None:intergenic | 55.0% | |
| GCAAGTTACCATGGGCAAGC+AGG | + | chr7_3:13617959-13617978 | Msa1093580:CDS | 55.0% | |
| AGGGTGTGGGGAATTGCTCA+TGG | + | chr7_3:13617979-13617998 | Msa1093580:CDS | 55.0% | |
| GGGTGTGGGGAATTGCTCAT+GGG | + | chr7_3:13617980-13617999 | Msa1093580:CDS | 55.0% | |
| TCTTGTGGCTGCATGCTGCA+GGG | + | chr7_3:13618039-13618058 | Msa1093580:CDS | 55.0% | |
| TGGATGCAAGTGCGACAGAC+CGG | + | chr7_3:13618464-13618483 | Msa1093580:CDS | 55.0% | |
| GAAGAACTTCGTGTGGGTGC+TGG | + | chr7_3:13619107-13619126 | Msa1093580:CDS | 55.0% | |
| ! | GCTGGACTGGGAGAACCATA+TGG | + | chr7_3:13619125-13619144 | Msa1093580:CDS | 55.0% |
| GCACACCAGGTGATGCCATA+TGG | - | chr7_3:13619143-13619162 | None:intergenic | 55.0% | |
| CAGCCTCGACATTGCCACAA+AGG | - | chr7_3:13619265-13619284 | None:intergenic | 55.0% | |
| GTGGCAATGTCGAGGCTGTT+AGG | + | chr7_3:13619267-13619286 | Msa1093580:CDS | 55.0% | |
| AGGAAGGAACTCGGTCTTGC+TGG | - | chr7_3:13619339-13619358 | None:intergenic | 55.0% | |
| GAGACGCCATGTGTACAGGA+AGG | - | chr7_3:13619355-13619374 | None:intergenic | 55.0% | |
| AGACGAGACGCCATGTGTAC+AGG | - | chr7_3:13619359-13619378 | None:intergenic | 55.0% | |
| GTACACATGGCGTCTCGTCT+AGG | + | chr7_3:13619359-13619378 | Msa1093580:CDS | 55.0% | |
| !!! | GGCTGGTGCTGATTTTGGCT+TGG | + | chr7_3:13619511-13619530 | Msa1093580:CDS | 55.0% |
| TTACACTGTGCAGCTCGTCG+TGG | + | chr7_3:13619971-13619990 | Msa1093580:CDS | 55.0% | |
| TGCAGCTCGTCGTGGTGATT+TGG | + | chr7_3:13619979-13619998 | Msa1093580:CDS | 55.0% | |
| GCCCGTAAACTGGTACTAGG+CGG | + | chr7_3:13620235-13620254 | Msa1093580:CDS | 55.0% | |
| TTTGTTGGGGCCAGTCTAGC+AGG | + | chr7_3:13620341-13620360 | Msa1093580:CDS | 55.0% | |
| GCACGTTTCTCCTGCTAGAC+TGG | - | chr7_3:13620354-13620373 | None:intergenic | 55.0% | |
| TGTGCTGCGAGGCAGTGTTA+GGG | + | chr7_3:13620374-13620393 | Msa1093580:CDS | 55.0% | |
| !! | GCTGCTAAGCTTTGGGTGAG+GGG | + | chr7_3:13620517-13620536 | Msa1093580:CDS | 55.0% |
| CGATTCTCGCGTTTCCTCCG+TGG | + | chr7_3:13615933-13615952 | Msa1093580:five_prime_UTR | 60.0% | |
| ! | ATTGTTGGTGAGTGCGGCGG+TGG | - | chr7_3:13615998-13616017 | None:intergenic | 60.0% |
| CGGAGTGGGAGGCTTGTAGA+AGG | - | chr7_3:13616081-13616100 | None:intergenic | 60.0% | |
| CTAAGGACAGATCGCCGGAG+TGG | - | chr7_3:13616096-13616115 | None:intergenic | 60.0% | |
| TACCATGGGCAAGCAGGGTG+TGG | + | chr7_3:13617965-13617984 | Msa1093580:CDS | 60.0% | |
| ACCATGGGCAAGCAGGGTGT+GGG | + | chr7_3:13617966-13617985 | Msa1093580:CDS | 60.0% | |
| CTCTTGTGGCTGCATGCTGC+AGG | + | chr7_3:13618038-13618057 | Msa1093580:CDS | 60.0% | |
| CTTGTGGCTGCATGCTGCAG+GGG | + | chr7_3:13618040-13618059 | Msa1093580:CDS | 60.0% | |
| TTGTGGCTGCATGCTGCAGG+GGG | + | chr7_3:13618041-13618060 | Msa1093580:CDS | 60.0% | |
| CTGCAGGGGGTTTGTCGATG+TGG | + | chr7_3:13618054-13618073 | Msa1093580:CDS | 60.0% | |
| GGATGCAAGTGCGACAGACC+GGG | + | chr7_3:13618465-13618484 | Msa1093580:CDS | 60.0% | |
| !! | ACTTCGTGTGGGTGCTGGAC+TGG | + | chr7_3:13619112-13619131 | Msa1093580:CDS | 60.0% |
| !! | CTTCGTGTGGGTGCTGGACT+GGG | + | chr7_3:13619113-13619132 | Msa1093580:CDS | 60.0% |
| GGAGTGTAGTCCTCCCCATC+TGG | - | chr7_3:13620049-13620068 | None:intergenic | 60.0% | |
| GAGAAACGTGCTGTGCTGCG+AGG | + | chr7_3:13620363-13620382 | Msa1093580:CDS | 60.0% | |
| CTGTGCTGCGAGGCAGTGTT+AGG | + | chr7_3:13620373-13620392 | Msa1093580:CDS | 60.0% | |
| TAGGTGAGCATGCGCCACGG+AGG | - | chr7_3:13615950-13615969 | None:intergenic | 65.0% | |
| ! | GGTGGTGGTGAAGGGAGTGG+TGG | - | chr7_3:13615980-13615999 | None:intergenic | 65.0% |
| ! | AGTGCGGCGGTGGTGGTGAA+GGG | - | chr7_3:13615988-13616007 | None:intergenic | 65.0% |
| CCATGGGCAAGCAGGGTGTG+GGG | + | chr7_3:13617967-13617986 | Msa1093580:CDS | 65.0% | |
| ! | GGCGGTGGTGGTGAAGGGAG+TGG | - | chr7_3:13615983-13616002 | None:intergenic | 70.0% |
| ! | GAGTGCGGCGGTGGTGGTGA+AGG | - | chr7_3:13615989-13616008 | None:intergenic | 70.0% |
| ! | GTTGGTGAGTGCGGCGGTGG+TGG | - | chr7_3:13615995-13616014 | None:intergenic | 70.0% |
| GGACAGATCGCCGGAGTGGG+AGG | - | chr7_3:13616092-13616111 | None:intergenic | 70.0% | |
| CCCCACACCCTGCTTGCCCA+TGG | - | chr7_3:13617970-13617989 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 13615931 | 13620567 | 13615931 | ID=Msa1093580;Name=Msa1093580 |
| chr7_3 | mRNA | 13615931 | 13620567 | 13615931 | ID=Msa1093580-mRNA-1;Parent=Msa1093580;Name=Msa1093580-mRNA-1;_AED=0.02;_eAED=0.02;_QI=85|0.33|0.25|1|1|1|4|0|758 |
| chr7_3 | exon | 13615931 | 13616315 | 13615931 | ID=Msa1093580-mRNA-1:exon:3249;Parent=Msa1093580-mRNA-1 |
| chr7_3 | exon | 13617818 | 13618132 | 13617818 | ID=Msa1093580-mRNA-1:exon:3250;Parent=Msa1093580-mRNA-1 |
| chr7_3 | exon | 13618457 | 13618594 | 13618457 | ID=Msa1093580-mRNA-1:exon:3251;Parent=Msa1093580-mRNA-1 |
| chr7_3 | exon | 13619044 | 13620567 | 13619044 | ID=Msa1093580-mRNA-1:exon:3252;Parent=Msa1093580-mRNA-1 |
| chr7_3 | five_prime_UTR | 13615931 | 13616015 | 13615931 | ID=Msa1093580-mRNA-1:five_prime_utr;Parent=Msa1093580-mRNA-1 |
| chr7_3 | CDS | 13616016 | 13616315 | 13616016 | ID=Msa1093580-mRNA-1:cds;Parent=Msa1093580-mRNA-1 |
| chr7_3 | CDS | 13617818 | 13618132 | 13617818 | ID=Msa1093580-mRNA-1:cds;Parent=Msa1093580-mRNA-1 |
| chr7_3 | CDS | 13618457 | 13618594 | 13618457 | ID=Msa1093580-mRNA-1:cds;Parent=Msa1093580-mRNA-1 |
| chr7_3 | CDS | 13619044 | 13620567 | 13619044 | ID=Msa1093580-mRNA-1:cds;Parent=Msa1093580-mRNA-1 |
| Gene Sequence |
| Protein sequence |