Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1093580 | XP_003622205.1 | 95.383 | 758 | 22 | 1 | 1 | 758 | 1 | 745 | 0.0 | 1472 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1093580 | sp|P16157|ANK1_HUMAN | 25.215 | 698 | 412 | 25 | 15 | 649 | 9 | 659 | 4.36e-32 | 138 |
Msa1093580 | sp|P16157|ANK1_HUMAN | 24.789 | 593 | 351 | 15 | 81 | 633 | 240 | 777 | 1.79e-20 | 101 |
Msa1093580 | sp|P16157|ANK1_HUMAN | 24.253 | 569 | 363 | 21 | 79 | 637 | 205 | 715 | 1.66e-15 | 85.1 |
Msa1093580 | sp|P16157|ANK1_HUMAN | 24.346 | 382 | 253 | 13 | 311 | 682 | 39 | 394 | 2.35e-14 | 81.3 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1093580 | G7L3C3 | 95.383 | 758 | 22 | 1 | 1 | 758 | 1 | 745 | 0.0 | 1472 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa1013920 | Msa1093580 | 0.920082 | 2.005252e-87 | -8.615850e-47 |
Msa1055180 | Msa1093580 | 0.819371 | 1.203102e-52 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1093580 | MtrunA17_Chr7g0226271 | 95.383 | 758 | 22 | 1 | 1 | 758 | 1 | 745 | 0.0 | 1472 |
Msa1093580 | MtrunA17_Chr3g0122751 | 57.049 | 759 | 303 | 7 | 7 | 756 | 13 | 757 | 0.0 | 840 |
Msa1093580 | MtrunA17_Chr4g0073161 | 28.346 | 254 | 136 | 8 | 449 | 659 | 40 | 290 | 2.87e-13 | 73.2 |
Msa1093580 | MtrunA17_Chr6g0461061 | 24.430 | 307 | 165 | 7 | 379 | 627 | 170 | 467 | 5.55e-13 | 72.4 |
Msa1093580 | MtrunA17_Chr3g0082141 | 26.269 | 335 | 191 | 9 | 316 | 635 | 513 | 806 | 7.67e-13 | 72.8 |
Msa1093580 | MtrunA17_Chr1g0164551 | 25.956 | 366 | 212 | 10 | 316 | 667 | 76 | 396 | 1.97e-12 | 70.9 |
Msa1093580 | MtrunA17_Chr5g0418551 | 32.090 | 134 | 85 | 2 | 501 | 630 | 65 | 196 | 2.95e-11 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1093580 | AT5G14230.1 | 61.265 | 759 | 272 | 5 | 1 | 756 | 1 | 740 | 0.0 | 907 |
Msa1093580 | AT5G14230.2 | 60.100 | 599 | 217 | 5 | 161 | 756 | 1 | 580 | 0.0 | 699 |
Msa1093580 | AT5G13530.2 | 25.758 | 330 | 217 | 9 | 316 | 625 | 511 | 832 | 6.74e-13 | 73.2 |
Msa1093580 | AT5G13530.1 | 25.378 | 331 | 218 | 9 | 316 | 625 | 511 | 833 | 1.69e-12 | 72.0 |
Find 196 sgRNAs with CRISPR-Local
Find 360 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTCAATGCCTAATTGATTT+TGG | 0.159363 | 7_3:+13619395 | Msa1093580:CDS |
TCGAGTTTGTGTTGAGTTTC+AGG | 0.163089 | 7_3:+13616219 | Msa1093580:CDS |
ACAAGGGCTGGTGCTGATTT+TGG | 0.171693 | 7_3:+13619506 | Msa1093580:CDS |
CAAAGCCTCTGAAGAGCTTT+TGG | 0.229513 | 7_3:-13617838 | None:intergenic |
AGTAGAAGTATTGCTGGATT+TGG | 0.255545 | 7_3:-13619636 | None:intergenic |
CTGTGCTGCGAGGCAGTGTT+AGG | 0.267092 | 7_3:+13620373 | Msa1093580:CDS |
TTGAAAACTGTCATTGAATC+TGG | 0.269575 | 7_3:+13619704 | Msa1093580:CDS |
TGTTGTCAGTTTGCTCCTTC+AGG | 0.273672 | 7_3:+13618573 | Msa1093580:CDS |
CTCTTGTGGCTGCATGCTGC+AGG | 0.273850 | 7_3:+13618038 | Msa1093580:CDS |
CGAATTTCTTTGCAAGTAGA+AGG | 0.278442 | 7_3:-13620168 | None:intergenic |
GGTCAGAAGCTGCTAAGCTT+TGG | 0.287071 | 7_3:+13620509 | Msa1093580:CDS |
TTCTTCAGGTGTGCTTTGTT+GGG | 0.306841 | 7_3:+13620327 | Msa1093580:CDS |
ACTTCGGTTTCGTAGTTTAC+TGG | 0.311637 | 7_3:-13616046 | None:intergenic |
TTACGTATGTTGCGTTCTTC+AGG | 0.312789 | 7_3:+13620313 | Msa1093580:CDS |
GCTCAACATTGCGTAGAAAT+AGG | 0.324872 | 7_3:+13620401 | Msa1093580:CDS |
GTTCTTCAGGTGTGCTTTGT+TGG | 0.326228 | 7_3:+13620326 | Msa1093580:CDS |
CTGGAAATGCTGAGCTTGTT+AGG | 0.333522 | 7_3:+13616284 | Msa1093580:CDS |
CAGAAGAACCTGGATTGTTC+AGG | 0.339711 | 7_3:+13620440 | Msa1093580:CDS |
AATCACAACCAAAATCAATT+AGG | 0.356750 | 7_3:-13619403 | None:intergenic |
GAGTGCGGCGGTGGTGGTGA+AGG | 0.356795 | 7_3:-13615986 | None:intergenic |
GTAGAAGTATTGCTGGATTT+GGG | 0.356951 | 7_3:-13619635 | None:intergenic |
ACTTCGTGTGGGTGCTGGAC+TGG | 0.365888 | 7_3:+13619112 | Msa1093580:CDS |
ATTCACATCAAAACCTTTGC+TGG | 0.367833 | 7_3:-13620020 | None:intergenic |
TGAGCTTGTTAGGAAGTTAC+TGG | 0.376528 | 7_3:+13616294 | Msa1093580:CDS |
GGATGCCCCTGCATTAATTA+AGG | 0.378185 | 7_3:-13617906 | None:intergenic |
GTGGCAATGTCGAGGCTGTT+AGG | 0.384969 | 7_3:+13619267 | Msa1093580:CDS |
TGCAGCTCGTCGTGGTGATT+TGG | 0.389340 | 7_3:+13619979 | Msa1093580:CDS |
GAACTGTAATTTATTTGAAA+AGG | 0.390139 | 7_3:+13619892 | Msa1093580:CDS |
CTACACCATGCTATCCTTTG+TGG | 0.401877 | 7_3:+13619248 | Msa1093580:CDS |
CACCGCCTAGTACCAGTTTA+CGG | 0.403132 | 7_3:-13620237 | None:intergenic |
AGATGAACTTGCCCGTAAAC+TGG | 0.403528 | 7_3:+13620225 | Msa1093580:CDS |
GTCAGAAGCTGCTAAGCTTT+GGG | 0.405076 | 7_3:+13620510 | Msa1093580:CDS |
GAAAGGGGTAATCAAAATAC+TGG | 0.416275 | 7_3:+13619935 | Msa1093580:CDS |
AGCTTCTTCACAAGCTGGCT+GGG | 0.416665 | 7_3:-13617927 | None:intergenic |
AGCTTGTGAAGAAGCTCTTC+TGG | 0.417060 | 7_3:+13617934 | Msa1093580:CDS |
GGGTGCTTACTAATAAGAAT+AGG | 0.420256 | 7_3:+13620461 | Msa1093580:CDS |
AGGAAGGAACTCGGTCTTGC+TGG | 0.420463 | 7_3:-13619336 | None:intergenic |
GCTTGAATTTACACTTGAAA+GGG | 0.421021 | 7_3:+13619919 | Msa1093580:CDS |
CTTGAGACCTTAATTAATGC+AGG | 0.427693 | 7_3:+13617899 | Msa1093580:CDS |
CTTCGTGTGGGTGCTGGACT+GGG | 0.429796 | 7_3:+13619113 | Msa1093580:CDS |
GTAAAGTTATGCAATAAATC+TGG | 0.432261 | 7_3:+13619836 | Msa1093580:CDS |
TACCATGGGCAAGCAGGGTG+TGG | 0.435095 | 7_3:+13617965 | Msa1093580:CDS |
GGAGTGTAGTCCTCCCCATC+TGG | 0.437604 | 7_3:-13620046 | None:intergenic |
TTTGTTGGGGCCAGTCTAGC+AGG | 0.438563 | 7_3:+13620341 | Msa1093580:CDS |
TTTCGATTGCTTGTATATGC+TGG | 0.439274 | 7_3:+13619806 | Msa1093580:CDS |
GAGCTTCTTCACAAGCTGGC+TGG | 0.439752 | 7_3:-13617928 | None:intergenic |
GTTTACTGGGAAAATCTGTT+TGG | 0.447674 | 7_3:-13616032 | None:intergenic |
GGTGCTTACTAATAAGAATA+GGG | 0.450836 | 7_3:+13620462 | Msa1093580:CDS |
CTTGACTATCAAGATGATAG+TGG | 0.456936 | 7_3:+13619737 | Msa1093580:CDS |
AGGGAGTGGTGGTTAGAGAT+AGG | 0.457371 | 7_3:-13615966 | None:intergenic |
GCAAGTTACCATGGGCAAGC+AGG | 0.458287 | 7_3:+13617959 | Msa1093580:CDS |
CTTCGGTTTCGTAGTTTACT+GGG | 0.458349 | 7_3:-13616045 | None:intergenic |
TCTTGTGGCTGCATGCTGCA+GGG | 0.459877 | 7_3:+13618039 | Msa1093580:CDS |
ATTAGGCATTGAGATATTGC+AGG | 0.461712 | 7_3:-13619386 | None:intergenic |
GTGGTGGATGTAATTAGAAA+TGG | 0.462784 | 7_3:+13619605 | Msa1093580:CDS |
TAGTTGCAGCTGTAGTTCAT+AGG | 0.467183 | 7_3:+13618542 | Msa1093580:CDS |
GTGGAGAATACTGTCATTGT+TGG | 0.468123 | 7_3:-13616010 | None:intergenic |
GCACGTTTCTCCTGCTAGAC+TGG | 0.468551 | 7_3:-13620351 | None:intergenic |
GGTGCATTTCGTATGTGAGG+GGG | 0.470458 | 7_3:+13620486 | Msa1093580:CDS |
TTTCTACGCAATGTTGAGCT+TGG | 0.472003 | 7_3:-13620397 | None:intergenic |
GTTGGTGAGTGCGGCGGTGG+TGG | 0.472906 | 7_3:-13615992 | None:intergenic |
AGTGCGGCGGTGGTGGTGAA+GGG | 0.474019 | 7_3:-13615985 | None:intergenic |
AACTATTTGAGACATGTTGC+AGG | 0.474097 | 7_3:-13619205 | None:intergenic |
TTCTTGAAATGACAGAGTGT+TGG | 0.475631 | 7_3:+13617803 | Msa1093580:intron |
GAAGAACTTCGTGTGGGTGC+TGG | 0.484007 | 7_3:+13619107 | Msa1093580:CDS |
GCACACCAGGTGATGCCATA+TGG | 0.484590 | 7_3:-13619140 | None:intergenic |
TCTGTTGATGTCAACTTCGC+CGG | 0.484593 | 7_3:+13616139 | Msa1093580:CDS |
CGGAGTGGGAGGCTTGTAGA+AGG | 0.485146 | 7_3:-13616078 | None:intergenic |
TGCTTGAATTTACACTTGAA+AGG | 0.487179 | 7_3:+13619918 | Msa1093580:CDS |
TGAAATTAAAAGCTTACAAA+GGG | 0.488174 | 7_3:-13620101 | None:intergenic |
TGGTCATGGGATAATGCAAC+TGG | 0.491893 | 7_3:+13619083 | Msa1093580:CDS |
GTACACATGGCGTCTCGTCT+AGG | 0.493808 | 7_3:+13619359 | Msa1093580:CDS |
TACTGGGAAAATCTGTTTGG+TGG | 0.494305 | 7_3:-13616029 | None:intergenic |
TTGTGGCTGCATGCTGCAGG+GGG | 0.494761 | 7_3:+13618041 | Msa1093580:CDS |
GGCGGTGGTGGTGAAGGGAG+TGG | 0.496566 | 7_3:-13615980 | None:intergenic |
TCCACATTTGTGTGGAGAGA+AGG | 0.496788 | 7_3:-13618508 | None:intergenic |
ACCGCCTAGTACCAGTTTAC+GGG | 0.498041 | 7_3:-13620236 | None:intergenic |
ACCATGGGCAAGCAGGGTGT+GGG | 0.499453 | 7_3:+13617966 | Msa1093580:CDS |
AGACGAGACGCCATGTGTAC+AGG | 0.499544 | 7_3:-13619356 | None:intergenic |
AGCTGCTAAGCTTTGGGTGA+GGG | 0.505228 | 7_3:+13620516 | Msa1093580:CDS |
GGGTGTGGGGAATTGCTCAT+GGG | 0.506960 | 7_3:+13617980 | Msa1093580:CDS |
TACGTAATTGTTTCACATGT+GGG | 0.507409 | 7_3:-13620297 | None:intergenic |
TTTGGCTTGGTGAACAGTGC+AGG | 0.509382 | 7_3:+13619524 | Msa1093580:CDS |
ATTGTTGGTGAGTGCGGCGG+TGG | 0.511745 | 7_3:-13615995 | None:intergenic |
TGGATGCAAGTGCGACAGAC+CGG | 0.512269 | 7_3:+13618464 | Msa1093580:CDS |
CTTGCCCGTAAACTGGTACT+AGG | 0.513587 | 7_3:+13620232 | Msa1093580:CDS |
CTTGTGGCTGCATGCTGCAG+GGG | 0.513819 | 7_3:+13618040 | Msa1093580:CDS |
TAAGGCTTGGAGCATGGTCA+TGG | 0.514093 | 7_3:+13619069 | Msa1093580:CDS |
TTGAACTCTCGAACAGACTC+TGG | 0.514187 | 7_3:+13619425 | Msa1093580:CDS |
AGGGTGTGGGGAATTGCTCA+TGG | 0.515456 | 7_3:+13617979 | Msa1093580:CDS |
GCTGGACTGGGAGAACCATA+TGG | 0.517961 | 7_3:+13619125 | Msa1093580:CDS |
CTTAGAATGTGGTGCTAATG+TGG | 0.519561 | 7_3:+13619295 | Msa1093580:CDS |
TGCAGCTGTAGTTCATAGGC+AGG | 0.519700 | 7_3:+13618546 | Msa1093580:CDS |
GAGTCGTACAAGTGGTCCTA+TGG | 0.520238 | 7_3:+13619569 | Msa1093580:CDS |
ACAGGTGATGCAGAAGAACC+TGG | 0.523891 | 7_3:+13620430 | Msa1093580:CDS |
CTCAAAGTACTAACAAGGGC+TGG | 0.525330 | 7_3:+13619494 | Msa1093580:CDS |
TCTTCAGGTGTGCTTTGTTG+GGG | 0.526572 | 7_3:+13620328 | Msa1093580:CDS |
TGTGGTTGAGACACTCATAA+AGG | 0.527208 | 7_3:+13618072 | Msa1093580:CDS |
TAGAAGGCGTTGTGAGACTT+CGG | 0.532369 | 7_3:-13616062 | None:intergenic |
TCCACTCATGTTAGCAGCAA+GGG | 0.533090 | 7_3:+13620066 | Msa1093580:CDS |
GTAAGCACCCTGAACAATCC+AGG | 0.533602 | 7_3:-13620448 | None:intergenic |
TCCCTTGCTGCTAACATGAG+TGG | 0.534250 | 7_3:-13620067 | None:intergenic |
GTGCATTTCGTATGTGAGGG+GGG | 0.537706 | 7_3:+13620487 | Msa1093580:CDS |
AGGTGCATTTCGTATGTGAG+GGG | 0.539200 | 7_3:+13620485 | Msa1093580:CDS |
TTCTGGAGGCAAGTTACCAT+GGG | 0.540626 | 7_3:+13617951 | Msa1093580:CDS |
TGCAACTACTGCAGCAGTGA+GGG | 0.541071 | 7_3:+13617859 | Msa1093580:CDS |
GGATGCAAGTGCGACAGACC+GGG | 0.543220 | 7_3:+13618465 | Msa1093580:CDS |
AGAAGAGCTTCTTCACAAGC+TGG | 0.543401 | 7_3:-13617932 | None:intergenic |
GTTCAGAAGCACACAAAATG+TGG | 0.545439 | 7_3:+13620265 | Msa1093580:CDS |
AGAAGAACCTGGATTGTTCA+GGG | 0.545678 | 7_3:+13620441 | Msa1093580:CDS |
AAAATACTCAACTGCACACC+AGG | 0.552182 | 7_3:-13619153 | None:intergenic |
TGTGCTGCGAGGCAGTGTTA+GGG | 0.555069 | 7_3:+13620374 | Msa1093580:CDS |
GCCTTCTCTCCACACAAATG+TGG | 0.555992 | 7_3:+13618507 | Msa1093580:CDS |
CTTCTGGAGGCAAGTTACCA+TGG | 0.556076 | 7_3:+13617950 | Msa1093580:CDS |
TTGAGACCTTAATTAATGCA+GGG | 0.556601 | 7_3:+13617900 | Msa1093580:CDS |
AAGCTGCTAAGCTTTGGGTG+AGG | 0.556926 | 7_3:+13620515 | Msa1093580:CDS |
ATACGTAATTGTTTCACATG+TGG | 0.557480 | 7_3:-13620298 | None:intergenic |
TTGAAGTAAGGCTTGGAGCA+TGG | 0.558223 | 7_3:+13619063 | Msa1093580:CDS |
CCATGGGCAAGCAGGGTGTG+GGG | 0.560261 | 7_3:+13617967 | Msa1093580:CDS |
GCTGCTAAGCTTTGGGTGAG+GGG | 0.561273 | 7_3:+13620517 | Msa1093580:CDS |
GAGGTGCATTTCGTATGTGA+GGG | 0.563987 | 7_3:+13620484 | Msa1093580:CDS |
GTTACATTGCTGACCAGCAA+AGG | 0.569092 | 7_3:+13620007 | Msa1093580:CDS |
ACTCTTCAAACTAACAGCTC+CGG | 0.573075 | 7_3:-13616158 | None:intergenic |
CAAGTTACCATGGGCAAGCA+GGG | 0.574424 | 7_3:+13617960 | Msa1093580:CDS |
ATGAAATTAAAAGCTTACAA+AGG | 0.575942 | 7_3:-13620102 | None:intergenic |
GGACAGATCGCCGGAGTGGG+AGG | 0.577562 | 7_3:-13616089 | None:intergenic |
GTTGACATCAACAGAAGGAT+CGG | 0.578074 | 7_3:-13616131 | None:intergenic |
CCCCACACCCTGCTTGCCCA+TGG | 0.578239 | 7_3:-13617967 | None:intergenic |
CAGCCTCGACATTGCCACAA+AGG | 0.578878 | 7_3:-13619262 | None:intergenic |
TTGCAAAGAAATTCGCAGAA+GGG | 0.578951 | 7_3:+13620176 | Msa1093580:CDS |
GGAGATGCAGTGAAAGGCTA+AGG | 0.579580 | 7_3:-13616110 | None:intergenic |
TTGATGTGAATGTTCCAGAT+GGG | 0.580176 | 7_3:+13620032 | Msa1093580:CDS |
CTTGAATTTACACTTGAAAG+GGG | 0.580515 | 7_3:+13619920 | Msa1093580:CDS |
CGATTCTCGCGTTTCCTCCG+TGG | 0.581973 | 7_3:+13615933 | Msa1093580:five_prime_UTR |
TTCAGAAGCACACAAAATGT+GGG | 0.586232 | 7_3:+13620266 | Msa1093580:CDS |
AACTACTGCAGCAGTGAGGG+AGG | 0.586911 | 7_3:+13617862 | Msa1093580:CDS |
TTTATTGCATAACTTTACAT+CGG | 0.586946 | 7_3:-13619831 | None:intergenic |
AAGGCTTGGAGCATGGTCAT+GGG | 0.588256 | 7_3:+13619070 | Msa1093580:CDS |
CGAGTTCCTTCCTGTACACA+TGG | 0.588613 | 7_3:+13619346 | Msa1093580:CDS |
GGAGGTGCATTTCGTATGTG+AGG | 0.592475 | 7_3:+13620483 | Msa1093580:CDS |
GTCTCAAATAGTTGTCATTG+TGG | 0.592574 | 7_3:+13619215 | Msa1093580:CDS |
ACTGTCATTGTTGGTGAGTG+CGG | 0.596472 | 7_3:-13616001 | None:intergenic |
TGCATTTCGTATGTGAGGGG+GGG | 0.598096 | 7_3:+13620488 | Msa1093580:CDS |
GAAGCACACAAAATGTGGGA+AGG | 0.598612 | 7_3:+13620270 | Msa1093580:CDS |
AAAGCTTACAAAGGGATGCA+TGG | 0.599357 | 7_3:-13620093 | None:intergenic |
TTGTGCAAAATATAAACAAG+AGG | 0.605272 | 7_3:+13619466 | Msa1093580:CDS |
CTTGCAAAGAAATTCGCAGA+AGG | 0.611082 | 7_3:+13620175 | Msa1093580:CDS |
TGAGACCTTAATTAATGCAG+GGG | 0.611370 | 7_3:+13617901 | Msa1093580:CDS |
GAATTTCTTTGCAAGTAGAA+GGG | 0.611776 | 7_3:-13620167 | None:intergenic |
CATTACAATCCACATTTGTG+TGG | 0.611859 | 7_3:-13618516 | None:intergenic |
CATGTGTACAGGAAGGAACT+CGG | 0.612747 | 7_3:-13619345 | None:intergenic |
AAGCACACAAAATGTGGGAA+GGG | 0.613050 | 7_3:+13620271 | Msa1093580:CDS |
AGGATCGGAGATGCAGTGAA+AGG | 0.613374 | 7_3:-13616116 | None:intergenic |
CATTGCCACAAAGGATAGCA+TGG | 0.613821 | 7_3:-13619253 | None:intergenic |
AAAGGCTAAGGACAGATCGC+CGG | 0.614312 | 7_3:-13616098 | None:intergenic |
GGTGGTGGTGAAGGGAGTGG+TGG | 0.615978 | 7_3:-13615977 | None:intergenic |
GAGAACCATATGGCATCACC+TGG | 0.618277 | 7_3:+13619135 | Msa1093580:CDS |
ACTACTGCAGCAGTGAGGGA+GGG | 0.618729 | 7_3:+13617863 | Msa1093580:CDS |
CTCCACTCATGTTAGCAGCA+AGG | 0.618965 | 7_3:+13620065 | Msa1093580:CDS |
TGATGTGAATGTTCCAGATG+GGG | 0.620066 | 7_3:+13620033 | Msa1093580:CDS |
AGGTCTCAAGAATATCAAGA+TGG | 0.621096 | 7_3:-13617886 | None:intergenic |
AGTGTCTCAAAGTACTAACA+AGG | 0.623722 | 7_3:+13619489 | Msa1093580:CDS |
TTTGATGTGAATGTTCCAGA+TGG | 0.625886 | 7_3:+13620031 | Msa1093580:CDS |
GTAAACCAAAAGCTCTTCAG+AGG | 0.628315 | 7_3:+13617833 | Msa1093580:CDS |
TATTGCTGTACACGCTCTTG+TGG | 0.628876 | 7_3:+13618024 | Msa1093580:CDS |
GAGAAACGTGCTGTGCTGCG+AGG | 0.633297 | 7_3:+13620363 | Msa1093580:CDS |
GAAGGAGCAAACTGACAACA+TGG | 0.634842 | 7_3:-13618570 | None:intergenic |
TAAGTGACTGTAAAAGCACC+CGG | 0.636325 | 7_3:-13618483 | None:intergenic |
GCTATGCATACAGCTATGAA+AGG | 0.641849 | 7_3:+13619770 | Msa1093580:CDS |
AGGGGTAATCAAAATACTGG+TGG | 0.642235 | 7_3:+13619938 | Msa1093580:CDS |
GTTAGGATACTCTTAGAATG+TGG | 0.643303 | 7_3:+13619284 | Msa1093580:CDS |
CTCATGTTAGCAGCAAGGGA+AGG | 0.644540 | 7_3:+13620070 | Msa1093580:CDS |
GCGAAGTTGACATCAACAGA+AGG | 0.645408 | 7_3:-13616136 | None:intergenic |
CTTCTACAAGCCTCCCACTC+CGG | 0.650889 | 7_3:+13616079 | Msa1093580:CDS |
CAATTGCCGAGTCGTACAAG+TGG | 0.652112 | 7_3:+13619561 | Msa1093580:CDS |
CACTGCTTGTTGAAAACCAT+AGG | 0.653989 | 7_3:-13619585 | None:intergenic |
TATCCTTTGTGGCAATGTCG+AGG | 0.654180 | 7_3:+13619259 | Msa1093580:CDS |
GGTATTAAACTTGTAACGAG+AGG | 0.654806 | 7_3:+13620538 | Msa1093580:CDS |
TTACACTGTGCAGCTCGTCG+TGG | 0.660221 | 7_3:+13619971 | Msa1093580:CDS |
ACTACAGAATGGTGCTACGA+CGG | 0.661827 | 7_3:+13619037 | Msa1093580:intron |
GTCATTGTTGGTGAGTGCGG+CGG | 0.663572 | 7_3:-13615998 | None:intergenic |
ATAGGACCACTTGTACGACT+CGG | 0.667303 | 7_3:-13619567 | None:intergenic |
CGTAGAAATAGGCACAACAC+AGG | 0.667404 | 7_3:+13620412 | Msa1093580:CDS |
AACTGGCGAAGAACTTCGTG+TGG | 0.670473 | 7_3:+13619100 | Msa1093580:CDS |
AGATAGGTGAGCATGCGCCA+CGG | 0.671055 | 7_3:-13615950 | None:intergenic |
TTGTGAAGAAGCTCTTCTGG+AGG | 0.676266 | 7_3:+13617937 | Msa1093580:CDS |
CTAAGGACAGATCGCCGGAG+TGG | 0.676625 | 7_3:-13616093 | None:intergenic |
TTGCAACTACTGCAGCAGTG+AGG | 0.677688 | 7_3:+13617858 | Msa1093580:CDS |
GAGACGCCATGTGTACAGGA+AGG | 0.685160 | 7_3:-13619352 | None:intergenic |
GCTTACTAATAAGAATAGGG+AGG | 0.702981 | 7_3:+13620465 | Msa1093580:CDS |
TGTGAATGTTCCAGATGGGG+AGG | 0.702989 | 7_3:+13620036 | Msa1093580:CDS |
GTGTCTCAAAGTACTAACAA+GGG | 0.718421 | 7_3:+13619490 | Msa1093580:CDS |
AGATGATAGTGGTTTCTCAG+CGG | 0.723493 | 7_3:+13619748 | Msa1093580:CDS |
AGAGCGTGTACAGCAATATG+CGG | 0.731066 | 7_3:-13618019 | None:intergenic |
ACTGGCGAAGAACTTCGTGT+GGG | 0.731967 | 7_3:+13619101 | Msa1093580:CDS |
GCCCGTAAACTGGTACTAGG+CGG | 0.752401 | 7_3:+13620235 | Msa1093580:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTATTTTATATAAGTG+GGG | - | chr7_3:13617448-13617467 | None:intergenic | 10.0% |
!! | AATAAATAAAAAATCTTGTT+AGG | + | chr7_3:13617744-13617763 | Msa1093580:intron | 10.0% |
!! | ATAAATAAAAAATCTTGTTA+GGG | + | chr7_3:13617745-13617764 | Msa1093580:intron | 10.0% |
!! | ATATGTGATTACATTTAATT+AGG | + | chr7_3:13616710-13616729 | Msa1093580:intron | 15.0% |
!!! | TTTTAAGGAAAATTTCAAAA+TGG | + | chr7_3:13616844-13616863 | Msa1093580:intron | 15.0% |
!!! | AACCAAAAAAATTGTTATTT+TGG | - | chr7_3:13617297-13617316 | None:intergenic | 15.0% |
!! | AGTTTCATAATATTATTAGA+GGG | - | chr7_3:13618279-13618298 | None:intergenic | 15.0% |
!! | TAGTTTCATAATATTATTAG+AGG | - | chr7_3:13618280-13618299 | None:intergenic | 15.0% |
!!! | AATTTGAGATATTTTTTCAA+TGG | + | chr7_3:13618431-13618450 | Msa1093580:intron | 15.0% |
!!! | TTCAATTTCAACTGTTTTAT+TGG | + | chr7_3:13616357-13616376 | Msa1093580:intron | 20.0% |
!!! | CTATTTGTTTTGAAAAATGA+TGG | + | chr7_3:13616425-13616444 | Msa1093580:intron | 20.0% |
!!! | TGAATGAATATTTTCTGAAA+TGG | + | chr7_3:13616615-13616634 | Msa1093580:intron | 20.0% |
!!! | ACTTTTACTTTATGTTGATT+TGG | + | chr7_3:13616973-13616992 | Msa1093580:intron | 20.0% |
!!! | GAATTTTTTAGCCATAAAAA+AGG | - | chr7_3:13617018-13617037 | None:intergenic | 20.0% |
!! | AGAAAAATGTATTGTCAAAA+GGG | - | chr7_3:13617070-13617089 | None:intergenic | 20.0% |
!! | TAGAAAAATGTATTGTCAAA+AGG | - | chr7_3:13617071-13617090 | None:intergenic | 20.0% |
!! | AAAATGAATTGCAAAGAAAA+TGG | + | chr7_3:13617140-13617159 | Msa1093580:intron | 20.0% |
!!! | GTCCAAAATAACAATTTTTT+TGG | + | chr7_3:13617292-13617311 | Msa1093580:intron | 20.0% |
!! | CATTATATGTTTATGTTCAA+TGG | - | chr7_3:13617381-13617400 | None:intergenic | 20.0% |
!! | AATAAAGCTGAGATATAATA+AGG | - | chr7_3:13617537-13617556 | None:intergenic | 20.0% |
!!! | AGCTTTTACAAAAATTACAA+TGG | + | chr7_3:13617602-13617621 | Msa1093580:intron | 20.0% |
!! | TTTCAATACTTCAAACAAAT+TGG | + | chr7_3:13617713-13617732 | Msa1093580:intron | 20.0% |
!!! | TGATTATAGAGATTTTGTAA+TGG | + | chr7_3:13618117-13618136 | Msa1093580:intron | 20.0% |
!!! | ATTGTTTTTTCCCTATTATT+TGG | + | chr7_3:13618177-13618196 | Msa1093580:intron | 20.0% |
!! | GTTTCATAATATTATTAGAG+GGG | - | chr7_3:13618278-13618297 | None:intergenic | 20.0% |
!! | TAAAACTACAAATAATAAGC+TGG | - | chr7_3:13618373-13618392 | None:intergenic | 20.0% |
!!! | TTATTTGTAGTTTTAGCTTA+CGG | + | chr7_3:13618378-13618397 | Msa1093580:intron | 20.0% |
!! | TTTATTGCATAACTTTACAT+CGG | - | chr7_3:13619834-13619853 | None:intergenic | 20.0% |
!! | GAACTGTAATTTATTTGAAA+AGG | + | chr7_3:13619892-13619911 | Msa1093580:CDS | 20.0% |
!! | TGAAATTAAAAGCTTACAAA+GGG | - | chr7_3:13620104-13620123 | None:intergenic | 20.0% |
!! | ATGAAATTAAAAGCTTACAA+AGG | - | chr7_3:13620105-13620124 | None:intergenic | 20.0% |
!!! | TGTAAGCTTTTAATTTCATA+CGG | + | chr7_3:13620106-13620125 | Msa1093580:CDS | 20.0% |
! | ACATCTAATCGAAAATGTTT+CGG | + | chr7_3:13616676-13616695 | Msa1093580:intron | 25.0% |
!! | TCTGAGTGAATAGTTTTTAA+AGG | + | chr7_3:13616757-13616776 | Msa1093580:intron | 25.0% |
!! | CTGAGTGAATAGTTTTTAAA+GGG | + | chr7_3:13616758-13616777 | Msa1093580:intron | 25.0% |
!!! | TGAGTGAATAGTTTTTAAAG+GGG | + | chr7_3:13616759-13616778 | Msa1093580:intron | 25.0% |
! | GAATTTCATCTTCAAAGTAA+CGG | + | chr7_3:13616887-13616906 | Msa1093580:intron | 25.0% |
! | AATTTCATCTTCAAAGTAAC+GGG | + | chr7_3:13616888-13616907 | Msa1093580:intron | 25.0% |
!!! | TCACTTTTTCTCCTTTTTTA+TGG | + | chr7_3:13617004-13617023 | Msa1093580:intron | 25.0% |
! | GAAAAATGTATTGTCAAAAG+GGG | - | chr7_3:13617069-13617088 | None:intergenic | 25.0% |
! | AAATAATACACTCAACAATC+AGG | - | chr7_3:13617222-13617241 | None:intergenic | 25.0% |
!! | GATTGTTGAGTGTATTATTT+TGG | + | chr7_3:13617222-13617241 | Msa1093580:intron | 25.0% |
!!! | TGTATTATTTTGGTTGCATT+AGG | + | chr7_3:13617232-13617251 | Msa1093580:intron | 25.0% |
!! | GTTTGCTACTAAAAACAAAA+AGG | - | chr7_3:13617321-13617340 | None:intergenic | 25.0% |
! | ATATGTTTATGTTCAATGGT+CGG | - | chr7_3:13617377-13617396 | None:intergenic | 25.0% |
!!! | TCAGCTTTATTTTTGTATCA+CGG | + | chr7_3:13617546-13617565 | Msa1093580:intron | 25.0% |
! | TAAATGCATATTTGGTATCA+CGG | - | chr7_3:13617652-13617671 | None:intergenic | 25.0% |
! | TATCAGACTAAATGCATATT+TGG | - | chr7_3:13617660-13617679 | None:intergenic | 25.0% |
!!! | TGTTTGAAGTATTGAAAAGT+AGG | - | chr7_3:13617710-13617729 | None:intergenic | 25.0% |
!! | TTTTAACGTGCCAAATAATA+GGG | - | chr7_3:13618190-13618209 | None:intergenic | 25.0% |
!! | TTTTTAACGTGCCAAATAAT+AGG | - | chr7_3:13618191-13618210 | None:intergenic | 25.0% |
! | TGAAAGCTAAATAATACTCA+AGG | - | chr7_3:13618309-13618328 | None:intergenic | 25.0% |
!! | CATGTTTATTTAGAATCCTA+TGG | - | chr7_3:13618336-13618355 | None:intergenic | 25.0% |
!! | ATATATTGGCTATAACAACT+AGG | - | chr7_3:13618680-13618699 | None:intergenic | 25.0% |
! | TTAAACACTAACAATGAAGT+AGG | - | chr7_3:13618901-13618920 | None:intergenic | 25.0% |
! | TTTACAAATGAACTACAGAA+TGG | + | chr7_3:13619026-13619045 | Msa1093580:intron | 25.0% |
!!! | GTTGAGTATTTTGAAAAAAG+TGG | + | chr7_3:13619164-13619183 | Msa1093580:CDS | 25.0% |
! | AATCACAACCAAAATCAATT+AGG | - | chr7_3:13619406-13619425 | None:intergenic | 25.0% |
! | TTGTGCAAAATATAAACAAG+AGG | + | chr7_3:13619466-13619485 | Msa1093580:CDS | 25.0% |
! | CTTAGATACAAAAATCAAAG+GGG | - | chr7_3:13619666-13619685 | None:intergenic | 25.0% |
! | CCTTAGATACAAAAATCAAA+GGG | - | chr7_3:13619667-13619686 | None:intergenic | 25.0% |
! | GTAAAGTTATGCAATAAATC+TGG | + | chr7_3:13619836-13619855 | Msa1093580:CDS | 25.0% |
AAACAGTTGAAATTGAAGCA+CGG | - | chr7_3:13616354-13616373 | None:intergenic | 30.0% | |
! | TGCAATTCTTCTAATGCTTT+TGG | + | chr7_3:13616503-13616522 | Msa1093580:intron | 30.0% |
AATGTAATCACATATGTCAC+TGG | - | chr7_3:13616705-13616724 | None:intergenic | 30.0% | |
!!! | TTTTGAATTACCGATTCGTT+TGG | - | chr7_3:13616802-13616821 | None:intergenic | 30.0% |
!!! | GTGTGTGTGTGTTTTTTTTA+AGG | + | chr7_3:13616829-13616848 | Msa1093580:intron | 30.0% |
ATTTCATCTTCAAAGTAACG+GGG | + | chr7_3:13616889-13616908 | Msa1093580:intron | 30.0% | |
AAAAGGAGAAAAAGTGAAGT+GGG | - | chr7_3:13617001-13617020 | None:intergenic | 30.0% | |
AAAAAGGAGAAAAAGTGAAG+TGG | - | chr7_3:13617002-13617021 | None:intergenic | 30.0% | |
TATGTTTATGTTCAATGGTC+GGG | - | chr7_3:13617376-13617395 | None:intergenic | 30.0% | |
!!! | CTTTATTTTTGTATCACGGT+GGG | + | chr7_3:13617550-13617569 | Msa1093580:intron | 30.0% |
TTAGGGATATAAATTACTCC+AGG | + | chr7_3:13617762-13617781 | Msa1093580:intron | 30.0% | |
TTGAGACCTTAATTAATGCA+GGG | + | chr7_3:13617900-13617919 | Msa1093580:CDS | 30.0% | |
TATTTGGCACGTTAAAAAGT+AGG | + | chr7_3:13618193-13618212 | Msa1093580:intron | 30.0% | |
ATTTGGCACGTTAAAAAGTA+GGG | + | chr7_3:13618194-13618213 | Msa1093580:intron | 30.0% | |
ATATTATTAGAGGGGATGTT+GGG | - | chr7_3:13618270-13618289 | None:intergenic | 30.0% | |
AATATTATTAGAGGGGATGT+TGG | - | chr7_3:13618271-13618290 | None:intergenic | 30.0% | |
! | GTTTATTTAGAATCCTATGG+AGG | - | chr7_3:13618333-13618352 | None:intergenic | 30.0% |
!!! | TAGTTTTAGCTTACGGTTAT+TGG | + | chr7_3:13618385-13618404 | Msa1093580:intron | 30.0% |
TACGGTTATTGGTAAATACT+TGG | + | chr7_3:13618396-13618415 | Msa1093580:intron | 30.0% | |
!!! | ATATTTTTTCAATGGCAGTG+TGG | + | chr7_3:13618439-13618458 | Msa1093580:intron | 30.0% |
TAAGAGAAAAGTTTACCTGA+AGG | - | chr7_3:13618591-13618610 | None:intergenic | 30.0% | |
TTGCAAAAGCAAGGATATAT+TGG | - | chr7_3:13618694-13618713 | None:intergenic | 30.0% | |
TGACCTCAACTTATTAAAAC+TGG | + | chr7_3:13618818-13618837 | Msa1093580:intron | 30.0% | |
!! | TCTCCAGTTTTAATAAGTTG+AGG | - | chr7_3:13618824-13618843 | None:intergenic | 30.0% |
ACTAACAATGAAGTAGGAAT+CGG | - | chr7_3:13618895-13618914 | None:intergenic | 30.0% | |
AAGAAAAAAAAAACCTAGCG+AGG | - | chr7_3:13619007-13619026 | None:intergenic | 30.0% | |
!! | TCTCAATGCCTAATTGATTT+TGG | + | chr7_3:13619395-13619414 | Msa1093580:CDS | 30.0% |
! | TTTTGCACAAATCATCAAAG+CGG | - | chr7_3:13619456-13619475 | None:intergenic | 30.0% |
!! | CCCTTTGATTTTTGTATCTA+AGG | + | chr7_3:13619664-13619683 | Msa1093580:CDS | 30.0% |
GCCTTAGATACAAAAATCAA+AGG | - | chr7_3:13619668-13619687 | None:intergenic | 30.0% | |
!! | TTGATTTTTGTATCTAAGGC+AGG | + | chr7_3:13619668-13619687 | Msa1093580:CDS | 30.0% |
! | AATGACAGTTTTCAAAGCTT+CGG | - | chr7_3:13619699-13619718 | None:intergenic | 30.0% |
TTGAAAACTGTCATTGAATC+TGG | + | chr7_3:13619704-13619723 | Msa1093580:CDS | 30.0% | |
TGCTTGAATTTACACTTGAA+AGG | + | chr7_3:13619918-13619937 | Msa1093580:CDS | 30.0% | |
GCTTGAATTTACACTTGAAA+GGG | + | chr7_3:13619919-13619938 | Msa1093580:CDS | 30.0% | |
CTTGAATTTACACTTGAAAG+GGG | + | chr7_3:13619920-13619939 | Msa1093580:CDS | 30.0% | |
TGTAATGCTAAAAATGCAAG+AGG | + | chr7_3:13620136-13620155 | Msa1093580:CDS | 30.0% | |
GAATTTCTTTGCAAGTAGAA+GGG | - | chr7_3:13620170-13620189 | None:intergenic | 30.0% | |
TACGTAATTGTTTCACATGT+GGG | - | chr7_3:13620300-13620319 | None:intergenic | 30.0% | |
ATACGTAATTGTTTCACATG+TGG | - | chr7_3:13620301-13620320 | None:intergenic | 30.0% | |
GGTGCTTACTAATAAGAATA+GGG | + | chr7_3:13620462-13620481 | Msa1093580:CDS | 30.0% | |
GTTTACTGGGAAAATCTGTT+TGG | - | chr7_3:13616035-13616054 | None:intergenic | 35.0% | |
!!! | GCTTTTTGTTGTTGTTGTTG+TGG | + | chr7_3:13616379-13616398 | Msa1093580:intron | 35.0% |
TAATCTTAACCTCTGTAGCA+TGG | + | chr7_3:13616651-13616670 | Msa1093580:intron | 35.0% | |
TGTTAGAGATCCAAACGAAT+CGG | + | chr7_3:13616789-13616808 | Msa1093580:intron | 35.0% | |
AAATCCATCAATAAACGCGA+AGG | - | chr7_3:13616942-13616961 | None:intergenic | 35.0% | |
AAAGGAGAAAAAGTGAAGTG+GGG | - | chr7_3:13617000-13617019 | None:intergenic | 35.0% | |
GGGGACATATAATAATGTGA+AGG | - | chr7_3:13617050-13617069 | None:intergenic | 35.0% | |
! | CTCGCTTTAGATATAGAAGT+AGG | - | chr7_3:13617101-13617120 | None:intergenic | 35.0% |
! | CTACTTCTATATCTAAAGCG+AGG | + | chr7_3:13617099-13617118 | Msa1093580:intron | 35.0% |
!!! | GCTTTATTTTTGTATCACGG+TGG | + | chr7_3:13617549-13617568 | Msa1093580:intron | 35.0% |
! | TTTTTGTAAAAGCTACACGC+TGG | - | chr7_3:13617596-13617615 | None:intergenic | 35.0% |
GGTAAGTTTCCAAAATTCAC+GGG | - | chr7_3:13617631-13617650 | None:intergenic | 35.0% | |
CGGTAAGTTTCCAAAATTCA+CGG | - | chr7_3:13617632-13617651 | None:intergenic | 35.0% | |
AATTACTCCAGGCTATTAAC+AGG | + | chr7_3:13617773-13617792 | Msa1093580:intron | 35.0% | |
AAATCAACCTGTTAATAGCC+TGG | - | chr7_3:13617783-13617802 | None:intergenic | 35.0% | |
TTCTTGAAATGACAGAGTGT+TGG | + | chr7_3:13617803-13617822 | Msa1093580:intron | 35.0% | |
AGGTCTCAAGAATATCAAGA+TGG | - | chr7_3:13617889-13617908 | None:intergenic | 35.0% | |
CTTGAGACCTTAATTAATGC+AGG | + | chr7_3:13617899-13617918 | Msa1093580:CDS | 35.0% | |
TGAGACCTTAATTAATGCAG+GGG | + | chr7_3:13617901-13617920 | Msa1093580:CDS | 35.0% | |
AAAACAATTGCAGATGCTTC+AGG | - | chr7_3:13618165-13618184 | None:intergenic | 35.0% | |
CTAGGAAGAAGACAATATCA+TGG | - | chr7_3:13618221-13618240 | None:intergenic | 35.0% | |
TGATATTGTCTTCTTCCTAG+AGG | + | chr7_3:13618221-13618240 | Msa1093580:intron | 35.0% | |
TATTATTAGAGGGGATGTTG+GGG | - | chr7_3:13618269-13618288 | None:intergenic | 35.0% | |
!! | ATTTAGCTTTCATCCTCCAT+AGG | + | chr7_3:13618317-13618336 | Msa1093580:intron | 35.0% |
CATTACAATCCACATTTGTG+TGG | - | chr7_3:13618519-13618538 | None:intergenic | 35.0% | |
TGGTAATCAAAGGTTTGAAG+CGG | - | chr7_3:13618615-13618634 | None:intergenic | 35.0% | |
CTAACTGAACTGGTAATCAA+AGG | - | chr7_3:13618625-13618644 | None:intergenic | 35.0% | |
CTTTGATTACCAGTTCAGTT+AGG | + | chr7_3:13618623-13618642 | Msa1093580:intron | 35.0% | |
TCTTGTTAACCTAACTGAAC+TGG | - | chr7_3:13618635-13618654 | None:intergenic | 35.0% | |
GATGGAAAATTGCAAAAGCA+AGG | - | chr7_3:13618703-13618722 | None:intergenic | 35.0% | |
ATGTAACAGTAGTTCACAGA+TGG | - | chr7_3:13618721-13618740 | None:intergenic | 35.0% | |
GTGATTCAATATCGCTTGAT+GGG | - | chr7_3:13618779-13618798 | None:intergenic | 35.0% | |
!! | ATTTTGTTATCAGTCTGCCA+AGG | + | chr7_3:13618843-13618862 | Msa1093580:intron | 35.0% |
CCTAACATCATTAAAAGAGG+TGG | - | chr7_3:13618872-13618891 | None:intergenic | 35.0% | |
! | CCACCTCTTTTAATGATGTT+AGG | + | chr7_3:13618869-13618888 | Msa1093580:intron | 35.0% |
!! | TGATTAGTTAGCTCTGTTGA+TGG | + | chr7_3:13618925-13618944 | Msa1093580:intron | 35.0% |
!! | TCTGTTGATGGTCTCATAAT+TGG | + | chr7_3:13618937-13618956 | Msa1093580:intron | 35.0% |
! | CAACTAGAAATGATAGTGAG+AGG | - | chr7_3:13618969-13618988 | None:intergenic | 35.0% |
!!! | AATTTTAACTGATCCTCGCT+AGG | + | chr7_3:13618991-13619010 | Msa1093580:intron | 35.0% |
! | AACTATTTGAGACATGTTGC+AGG | - | chr7_3:13619208-13619227 | None:intergenic | 35.0% |
GTCTCAAATAGTTGTCATTG+TGG | + | chr7_3:13619215-13619234 | Msa1093580:CDS | 35.0% | |
GTTAGGATACTCTTAGAATG+TGG | + | chr7_3:13619284-13619303 | Msa1093580:CDS | 35.0% | |
!! | ATTAGGCATTGAGATATTGC+AGG | - | chr7_3:13619389-13619408 | None:intergenic | 35.0% |
! | AGTGTCTCAAAGTACTAACA+AGG | + | chr7_3:13619489-13619508 | Msa1093580:CDS | 35.0% |
! | GTGTCTCAAAGTACTAACAA+GGG | + | chr7_3:13619490-13619509 | Msa1093580:CDS | 35.0% |
!! | GTGGTGGATGTAATTAGAAA+TGG | + | chr7_3:13619605-13619624 | Msa1093580:CDS | 35.0% |
!! | GTAGAAGTATTGCTGGATTT+GGG | - | chr7_3:13619638-13619657 | None:intergenic | 35.0% |
!! | AGTAGAAGTATTGCTGGATT+TGG | - | chr7_3:13619639-13619658 | None:intergenic | 35.0% |
!! | GGAAAAAGTAGAAGTATTGC+TGG | - | chr7_3:13619645-13619664 | None:intergenic | 35.0% |
CTTGACTATCAAGATGATAG+TGG | + | chr7_3:13619737-13619756 | Msa1093580:CDS | 35.0% | |
TTTCGATTGCTTGTATATGC+TGG | + | chr7_3:13619806-13619825 | Msa1093580:CDS | 35.0% | |
GAAAGGGGTAATCAAAATAC+TGG | + | chr7_3:13619935-13619954 | Msa1093580:CDS | 35.0% | |
ATTCACATCAAAACCTTTGC+TGG | - | chr7_3:13620023-13620042 | None:intergenic | 35.0% | |
TTTGATGTGAATGTTCCAGA+TGG | + | chr7_3:13620031-13620050 | Msa1093580:CDS | 35.0% | |
TTGATGTGAATGTTCCAGAT+GGG | + | chr7_3:13620032-13620051 | Msa1093580:CDS | 35.0% | |
CGAATTTCTTTGCAAGTAGA+AGG | - | chr7_3:13620171-13620190 | None:intergenic | 35.0% | |
TTGCAAAGAAATTCGCAGAA+GGG | + | chr7_3:13620176-13620195 | Msa1093580:CDS | 35.0% | |
! | TTTTGTGTGCTTCTGAACAT+AGG | - | chr7_3:13620263-13620282 | None:intergenic | 35.0% |
! | TTCAGAAGCACACAAAATGT+GGG | + | chr7_3:13620266-13620285 | Msa1093580:CDS | 35.0% |
GGGTGCTTACTAATAAGAAT+AGG | + | chr7_3:13620461-13620480 | Msa1093580:CDS | 35.0% | |
GCTTACTAATAAGAATAGGG+AGG | + | chr7_3:13620465-13620484 | Msa1093580:CDS | 35.0% | |
GGTATTAAACTTGTAACGAG+AGG | + | chr7_3:13620538-13620557 | Msa1093580:CDS | 35.0% | |
GTGGAGAATACTGTCATTGT+TGG | - | chr7_3:13616013-13616032 | None:intergenic | 40.0% | |
TACTGGGAAAATCTGTTTGG+TGG | - | chr7_3:13616032-13616051 | None:intergenic | 40.0% | |
CTTCGGTTTCGTAGTTTACT+GGG | - | chr7_3:13616048-13616067 | None:intergenic | 40.0% | |
ACTTCGGTTTCGTAGTTTAC+TGG | - | chr7_3:13616049-13616068 | None:intergenic | 40.0% | |
GTTGACATCAACAGAAGGAT+CGG | - | chr7_3:13616134-13616153 | None:intergenic | 40.0% | |
ACTCTTCAAACTAACAGCTC+CGG | - | chr7_3:13616161-13616180 | None:intergenic | 40.0% | |
TCGAGTTTGTGTTGAGTTTC+AGG | + | chr7_3:13616219-13616238 | Msa1093580:CDS | 40.0% | |
GCATGAACAGCAAGAAAAAG+AGG | - | chr7_3:13616265-13616284 | None:intergenic | 40.0% | |
!!! | CTTTTTCTTGCTGTTCATGC+TGG | + | chr7_3:13616265-13616284 | Msa1093580:CDS | 40.0% |
!! | TGAGCTTGTTAGGAAGTTAC+TGG | + | chr7_3:13616294-13616313 | Msa1093580:CDS | 40.0% |
GTAATCACTTCGTCATTGCT+CGG | + | chr7_3:13616316-13616335 | Msa1093580:intron | 40.0% | |
GAAACCTTCGCGTTTATTGA+TGG | + | chr7_3:13616935-13616954 | Msa1093580:intron | 40.0% | |
ATTAGGCCATGATTGTTGAG+AGG | + | chr7_3:13617249-13617268 | Msa1093580:intron | 40.0% | |
ACTCATCCTCTCAACAATCA+TGG | - | chr7_3:13617258-13617277 | None:intergenic | 40.0% | |
GTAAACCAAAAGCTCTTCAG+AGG | + | chr7_3:13617833-13617852 | Msa1093580:CDS | 40.0% | |
TGTGGTTGAGACACTCATAA+AGG | + | chr7_3:13618072-13618091 | Msa1093580:CDS | 40.0% | |
ATTATTAGAGGGGATGTTGG+GGG | - | chr7_3:13618268-13618287 | None:intergenic | 40.0% | |
CAAATAATAAGCTGGAGCAC+TGG | - | chr7_3:13618365-13618384 | None:intergenic | 40.0% | |
!! | TAAGTGACTGTAAAAGCACC+CGG | - | chr7_3:13618486-13618505 | None:intergenic | 40.0% |
TAGTTGCAGCTGTAGTTCAT+AGG | + | chr7_3:13618542-13618561 | Msa1093580:CDS | 40.0% | |
CGTGATTCAATATCGCTTGA+TGG | - | chr7_3:13618780-13618799 | None:intergenic | 40.0% | |
CGGCCTAACATCATTAAAAG+AGG | - | chr7_3:13618875-13618894 | None:intergenic | 40.0% | |
!!! | CTACGACGGATTTTGAAGTA+AGG | + | chr7_3:13619051-13619070 | Msa1093580:CDS | 40.0% |
!!! | ACGGATTTTGAAGTAAGGCT+TGG | + | chr7_3:13619056-13619075 | Msa1093580:CDS | 40.0% |
AAAATACTCAACTGCACACC+AGG | - | chr7_3:13619156-13619175 | None:intergenic | 40.0% | |
! | CTTAGAATGTGGTGCTAATG+TGG | + | chr7_3:13619295-13619314 | Msa1093580:CDS | 40.0% |
!!! | CTTGCTGGTTGTTTTGACAA+GGG | - | chr7_3:13619324-13619343 | None:intergenic | 40.0% |
!!! | TCTTGCTGGTTGTTTTGACA+AGG | - | chr7_3:13619325-13619344 | None:intergenic | 40.0% |
! | CACTGCTTGTTGAAAACCAT+AGG | - | chr7_3:13619588-13619607 | None:intergenic | 40.0% |
! | CTATGGTTTTCAACAAGCAG+TGG | + | chr7_3:13619586-13619605 | Msa1093580:CDS | 40.0% |
!! | AGATGATAGTGGTTTCTCAG+CGG | + | chr7_3:13619748-13619767 | Msa1093580:CDS | 40.0% |
GCTATGCATACAGCTATGAA+AGG | + | chr7_3:13619770-13619789 | Msa1093580:CDS | 40.0% | |
AGGGGTAATCAAAATACTGG+TGG | + | chr7_3:13619938-13619957 | Msa1093580:CDS | 40.0% | |
TGATGTGAATGTTCCAGATG+GGG | + | chr7_3:13620033-13620052 | Msa1093580:CDS | 40.0% | |
AAAGCTTACAAAGGGATGCA+TGG | - | chr7_3:13620096-13620115 | None:intergenic | 40.0% | |
CTTGCAAAGAAATTCGCAGA+AGG | + | chr7_3:13620175-13620194 | Msa1093580:CDS | 40.0% | |
! | GTTCAGAAGCACACAAAATG+TGG | + | chr7_3:13620265-13620284 | Msa1093580:CDS | 40.0% |
AAGCACACAAAATGTGGGAA+GGG | + | chr7_3:13620271-13620290 | Msa1093580:CDS | 40.0% | |
TTACGTATGTTGCGTTCTTC+AGG | + | chr7_3:13620313-13620332 | Msa1093580:CDS | 40.0% | |
! | TTCTTCAGGTGTGCTTTGTT+GGG | + | chr7_3:13620327-13620346 | Msa1093580:CDS | 40.0% |
TTTCTACGCAATGTTGAGCT+TGG | - | chr7_3:13620400-13620419 | None:intergenic | 40.0% | |
GCTCAACATTGCGTAGAAAT+AGG | + | chr7_3:13620401-13620420 | Msa1093580:CDS | 40.0% | |
AGAAGAACCTGGATTGTTCA+GGG | + | chr7_3:13620441-13620460 | Msa1093580:CDS | 40.0% | |
! | ACTGTCATTGTTGGTGAGTG+CGG | - | chr7_3:13616004-13616023 | None:intergenic | 45.0% |
!! | TAGAAGGCGTTGTGAGACTT+CGG | - | chr7_3:13616065-13616084 | None:intergenic | 45.0% |
GCGAAGTTGACATCAACAGA+AGG | - | chr7_3:13616139-13616158 | None:intergenic | 45.0% | |
TCTGTTGATGTCAACTTCGC+CGG | + | chr7_3:13616139-13616158 | Msa1093580:CDS | 45.0% | |
! | CTGGAAATGCTGAGCTTGTT+AGG | + | chr7_3:13616284-13616303 | Msa1093580:CDS | 45.0% |
TAGATGTGTCCATGCTACAG+AGG | - | chr7_3:13616663-13616682 | None:intergenic | 45.0% | |
! | TCATCTTCAAAGTAACGGGG+TGG | + | chr7_3:13616892-13616911 | Msa1093580:intron | 45.0% |
ATATAAGTGGGGCCTGAAGA+GGG | - | chr7_3:13617437-13617456 | None:intergenic | 45.0% | |
TATATAAGTGGGGCCTGAAG+AGG | - | chr7_3:13617438-13617457 | None:intergenic | 45.0% | |
!! | CGGTGGGTTTGTTGAAATCA+CGG | + | chr7_3:13617566-13617585 | Msa1093580:intron | 45.0% |
! | CAATGGCTACCCGTGAATTT+TGG | + | chr7_3:13617619-13617638 | Msa1093580:intron | 45.0% |
!! | CAAAGCCTCTGAAGAGCTTT+TGG | - | chr7_3:13617841-13617860 | None:intergenic | 45.0% |
GGATGCCCCTGCATTAATTA+AGG | - | chr7_3:13617909-13617928 | None:intergenic | 45.0% | |
AGAAGAGCTTCTTCACAAGC+TGG | - | chr7_3:13617935-13617954 | None:intergenic | 45.0% | |
AGCTTGTGAAGAAGCTCTTC+TGG | + | chr7_3:13617934-13617953 | Msa1093580:CDS | 45.0% | |
TTGTGAAGAAGCTCTTCTGG+AGG | + | chr7_3:13617937-13617956 | Msa1093580:CDS | 45.0% | |
! | TTCTGGAGGCAAGTTACCAT+GGG | + | chr7_3:13617951-13617970 | Msa1093580:CDS | 45.0% |
AGAGCGTGTACAGCAATATG+CGG | - | chr7_3:13618022-13618041 | None:intergenic | 45.0% | |
TATTGCTGTACACGCTCTTG+TGG | + | chr7_3:13618024-13618043 | Msa1093580:CDS | 45.0% | |
TTGTCTTCTTCCTAGAGGCT+TGG | + | chr7_3:13618226-13618245 | Msa1093580:intron | 45.0% | |
TGTCTTCTTCCTAGAGGCTT+GGG | + | chr7_3:13618227-13618246 | Msa1093580:intron | 45.0% | |
TCCACATTTGTGTGGAGAGA+AGG | - | chr7_3:13618511-13618530 | None:intergenic | 45.0% | |
GAAGGAGCAAACTGACAACA+TGG | - | chr7_3:13618573-13618592 | None:intergenic | 45.0% | |
! | TGTTGTCAGTTTGCTCCTTC+AGG | + | chr7_3:13618573-13618592 | Msa1093580:CDS | 45.0% |
ATTAAAAGAGGTGGCTGCCT+TGG | - | chr7_3:13618863-13618882 | None:intergenic | 45.0% | |
!! | ACTACAGAATGGTGCTACGA+CGG | + | chr7_3:13619037-13619056 | Msa1093580:intron | 45.0% |
TTGAAGTAAGGCTTGGAGCA+TGG | + | chr7_3:13619063-13619082 | Msa1093580:CDS | 45.0% | |
TGGTCATGGGATAATGCAAC+TGG | + | chr7_3:13619083-13619102 | Msa1093580:CDS | 45.0% | |
CTACACCATGCTATCCTTTG+TGG | + | chr7_3:13619248-13619267 | Msa1093580:CDS | 45.0% | |
CATTGCCACAAAGGATAGCA+TGG | - | chr7_3:13619256-13619275 | None:intergenic | 45.0% | |
TATCCTTTGTGGCAATGTCG+AGG | + | chr7_3:13619259-13619278 | Msa1093580:CDS | 45.0% | |
CATGTGTACAGGAAGGAACT+CGG | - | chr7_3:13619348-13619367 | None:intergenic | 45.0% | |
TTGAACTCTCGAACAGACTC+TGG | + | chr7_3:13619425-13619444 | Msa1093580:CDS | 45.0% | |
! | CTCAAAGTACTAACAAGGGC+TGG | + | chr7_3:13619494-13619513 | Msa1093580:CDS | 45.0% |
ATAGGACCACTTGTACGACT+CGG | - | chr7_3:13619570-13619589 | None:intergenic | 45.0% | |
! | TGGTTTTCAACAAGCAGTGG+TGG | + | chr7_3:13619589-13619608 | Msa1093580:CDS | 45.0% |
GTTACATTGCTGACCAGCAA+AGG | + | chr7_3:13620007-13620026 | Msa1093580:CDS | 45.0% | |
TCCACTCATGTTAGCAGCAA+GGG | + | chr7_3:13620066-13620085 | Msa1093580:CDS | 45.0% | |
AGAAGGGAAAAACGAAGCAG+AGG | + | chr7_3:13620192-13620211 | Msa1093580:CDS | 45.0% | |
GAAGGGAAAAACGAAGCAGA+GGG | + | chr7_3:13620193-13620212 | Msa1093580:CDS | 45.0% | |
AGATGAACTTGCCCGTAAAC+TGG | + | chr7_3:13620225-13620244 | Msa1093580:CDS | 45.0% | |
GAAGCACACAAAATGTGGGA+AGG | + | chr7_3:13620270-13620289 | Msa1093580:CDS | 45.0% | |
GTTCTTCAGGTGTGCTTTGT+TGG | + | chr7_3:13620326-13620345 | Msa1093580:CDS | 45.0% | |
! | TCTTCAGGTGTGCTTTGTTG+GGG | + | chr7_3:13620328-13620347 | Msa1093580:CDS | 45.0% |
CGTAGAAATAGGCACAACAC+AGG | + | chr7_3:13620412-13620431 | Msa1093580:CDS | 45.0% | |
CAGAAGAACCTGGATTGTTC+AGG | + | chr7_3:13620440-13620459 | Msa1093580:CDS | 45.0% | |
GAGGTGCATTTCGTATGTGA+GGG | + | chr7_3:13620484-13620503 | Msa1093580:CDS | 45.0% | |
AGGTGCATTTCGTATGTGAG+GGG | + | chr7_3:13620485-13620504 | Msa1093580:CDS | 45.0% | |
GTCAGAAGCTGCTAAGCTTT+GGG | + | chr7_3:13620510-13620529 | Msa1093580:CDS | 45.0% | |
!!! | TTTTTTTATTTTATATAAGT+GGG | - | chr7_3:13617449-13617468 | None:intergenic | 5.0% |
!!! | ATTTTTTTATTTTATATAAG+TGG | - | chr7_3:13617450-13617469 | None:intergenic | 5.0% |
!!! | ATTTATAAAAAATCTATTTT+TGG | + | chr7_3:13617471-13617490 | Msa1093580:intron | 5.0% |
AGGGAGTGGTGGTTAGAGAT+AGG | - | chr7_3:13615969-13615988 | None:intergenic | 50.0% | |
AAAGGCTAAGGACAGATCGC+CGG | - | chr7_3:13616101-13616120 | None:intergenic | 50.0% | |
GGAGATGCAGTGAAAGGCTA+AGG | - | chr7_3:13616113-13616132 | None:intergenic | 50.0% | |
AGGATCGGAGATGCAGTGAA+AGG | - | chr7_3:13616119-13616138 | None:intergenic | 50.0% | |
TGGTCGGGACAACATGGTAT+GGG | - | chr7_3:13617361-13617380 | None:intergenic | 50.0% | |
ATGGTCGGGACAACATGGTA+TGG | - | chr7_3:13617362-13617381 | None:intergenic | 50.0% | |
GTTCAATGGTCGGGACAACA+TGG | - | chr7_3:13617367-13617386 | None:intergenic | 50.0% | |
TGCATGATGCATCCCTCTTC+AGG | + | chr7_3:13617422-13617441 | Msa1093580:intron | 50.0% | |
TTGCAACTACTGCAGCAGTG+AGG | + | chr7_3:13617858-13617877 | Msa1093580:CDS | 50.0% | |
TGCAACTACTGCAGCAGTGA+GGG | + | chr7_3:13617859-13617878 | Msa1093580:CDS | 50.0% | |
AGCTTCTTCACAAGCTGGCT+GGG | - | chr7_3:13617930-13617949 | None:intergenic | 50.0% | |
! | CTTCTGGAGGCAAGTTACCA+TGG | + | chr7_3:13617950-13617969 | Msa1093580:CDS | 50.0% |
CAAGTTACCATGGGCAAGCA+GGG | + | chr7_3:13617960-13617979 | Msa1093580:CDS | 50.0% | |
TCAGTTGTACCCAAGCCTCT+AGG | - | chr7_3:13618239-13618258 | None:intergenic | 50.0% | |
!! | TAATAAGCTGGAGCACTGGC+AGG | - | chr7_3:13618361-13618380 | None:intergenic | 50.0% |
! | TTTTCAATGGCAGTGTGGCG+TGG | + | chr7_3:13618444-13618463 | Msa1093580:intron | 50.0% |
GCCTTCTCTCCACACAAATG+TGG | + | chr7_3:13618507-13618526 | Msa1093580:CDS | 50.0% | |
TGCAGCTGTAGTTCATAGGC+AGG | + | chr7_3:13618546-13618565 | Msa1093580:CDS | 50.0% | |
TAAGGCTTGGAGCATGGTCA+TGG | + | chr7_3:13619069-13619088 | Msa1093580:CDS | 50.0% | |
AAGGCTTGGAGCATGGTCAT+GGG | + | chr7_3:13619070-13619089 | Msa1093580:CDS | 50.0% | |
AACTGGCGAAGAACTTCGTG+TGG | + | chr7_3:13619100-13619119 | Msa1093580:CDS | 50.0% | |
ACTGGCGAAGAACTTCGTGT+GGG | + | chr7_3:13619101-13619120 | Msa1093580:CDS | 50.0% | |
GAGAACCATATGGCATCACC+TGG | + | chr7_3:13619135-13619154 | Msa1093580:CDS | 50.0% | |
CGAGTTCCTTCCTGTACACA+TGG | + | chr7_3:13619346-13619365 | Msa1093580:CDS | 50.0% | |
!!! | ACAAGGGCTGGTGCTGATTT+TGG | + | chr7_3:13619506-13619525 | Msa1093580:CDS | 50.0% |
!! | TTTGGCTTGGTGAACAGTGC+AGG | + | chr7_3:13619524-13619543 | Msa1093580:CDS | 50.0% |
CAATTGCCGAGTCGTACAAG+TGG | + | chr7_3:13619561-13619580 | Msa1093580:CDS | 50.0% | |
GAGTCGTACAAGTGGTCCTA+TGG | + | chr7_3:13619569-13619588 | Msa1093580:CDS | 50.0% | |
TGTGAATGTTCCAGATGGGG+AGG | + | chr7_3:13620036-13620055 | Msa1093580:CDS | 50.0% | |
CTCCACTCATGTTAGCAGCA+AGG | + | chr7_3:13620065-13620084 | Msa1093580:CDS | 50.0% | |
TCCCTTGCTGCTAACATGAG+TGG | - | chr7_3:13620070-13620089 | None:intergenic | 50.0% | |
CTCATGTTAGCAGCAAGGGA+AGG | + | chr7_3:13620070-13620089 | Msa1093580:CDS | 50.0% | |
CTTGCCCGTAAACTGGTACT+AGG | + | chr7_3:13620232-13620251 | Msa1093580:CDS | 50.0% | |
ACCGCCTAGTACCAGTTTAC+GGG | - | chr7_3:13620239-13620258 | None:intergenic | 50.0% | |
CACCGCCTAGTACCAGTTTA+CGG | - | chr7_3:13620240-13620259 | None:intergenic | 50.0% | |
ACAGGTGATGCAGAAGAACC+TGG | + | chr7_3:13620430-13620449 | Msa1093580:CDS | 50.0% | |
GTAAGCACCCTGAACAATCC+AGG | - | chr7_3:13620451-13620470 | None:intergenic | 50.0% | |
! | GGAGGTGCATTTCGTATGTG+AGG | + | chr7_3:13620483-13620502 | Msa1093580:CDS | 50.0% |
GGTGCATTTCGTATGTGAGG+GGG | + | chr7_3:13620486-13620505 | Msa1093580:CDS | 50.0% | |
GTGCATTTCGTATGTGAGGG+GGG | + | chr7_3:13620487-13620506 | Msa1093580:CDS | 50.0% | |
TGCATTTCGTATGTGAGGGG+GGG | + | chr7_3:13620488-13620507 | Msa1093580:CDS | 50.0% | |
GGTCAGAAGCTGCTAAGCTT+TGG | + | chr7_3:13620509-13620528 | Msa1093580:CDS | 50.0% | |
!! | AAGCTGCTAAGCTTTGGGTG+AGG | + | chr7_3:13620515-13620534 | Msa1093580:CDS | 50.0% |
!! | AGCTGCTAAGCTTTGGGTGA+GGG | + | chr7_3:13620516-13620535 | Msa1093580:CDS | 50.0% |
AGATAGGTGAGCATGCGCCA+CGG | - | chr7_3:13615953-13615972 | None:intergenic | 55.0% | |
! | GTCATTGTTGGTGAGTGCGG+CGG | - | chr7_3:13616001-13616020 | None:intergenic | 55.0% |
CTTCTACAAGCCTCCCACTC+CGG | + | chr7_3:13616079-13616098 | Msa1093580:CDS | 55.0% | |
TAAGGACAGATCGCCGGAGT+GGG | - | chr7_3:13616095-13616114 | None:intergenic | 55.0% | |
CTTCGTCATTGCTCGGATCG+CGG | + | chr7_3:13616323-13616342 | Msa1093580:intron | 55.0% | |
GGTCGGGACAACATGGTATG+GGG | - | chr7_3:13617360-13617379 | None:intergenic | 55.0% | |
AACTACTGCAGCAGTGAGGG+AGG | + | chr7_3:13617862-13617881 | Msa1093580:CDS | 55.0% | |
ACTACTGCAGCAGTGAGGGA+GGG | + | chr7_3:13617863-13617882 | Msa1093580:CDS | 55.0% | |
GAGCTTCTTCACAAGCTGGC+TGG | - | chr7_3:13617931-13617950 | None:intergenic | 55.0% | |
GCAAGTTACCATGGGCAAGC+AGG | + | chr7_3:13617959-13617978 | Msa1093580:CDS | 55.0% | |
AGGGTGTGGGGAATTGCTCA+TGG | + | chr7_3:13617979-13617998 | Msa1093580:CDS | 55.0% | |
GGGTGTGGGGAATTGCTCAT+GGG | + | chr7_3:13617980-13617999 | Msa1093580:CDS | 55.0% | |
TCTTGTGGCTGCATGCTGCA+GGG | + | chr7_3:13618039-13618058 | Msa1093580:CDS | 55.0% | |
TGGATGCAAGTGCGACAGAC+CGG | + | chr7_3:13618464-13618483 | Msa1093580:CDS | 55.0% | |
GAAGAACTTCGTGTGGGTGC+TGG | + | chr7_3:13619107-13619126 | Msa1093580:CDS | 55.0% | |
! | GCTGGACTGGGAGAACCATA+TGG | + | chr7_3:13619125-13619144 | Msa1093580:CDS | 55.0% |
GCACACCAGGTGATGCCATA+TGG | - | chr7_3:13619143-13619162 | None:intergenic | 55.0% | |
CAGCCTCGACATTGCCACAA+AGG | - | chr7_3:13619265-13619284 | None:intergenic | 55.0% | |
GTGGCAATGTCGAGGCTGTT+AGG | + | chr7_3:13619267-13619286 | Msa1093580:CDS | 55.0% | |
AGGAAGGAACTCGGTCTTGC+TGG | - | chr7_3:13619339-13619358 | None:intergenic | 55.0% | |
GAGACGCCATGTGTACAGGA+AGG | - | chr7_3:13619355-13619374 | None:intergenic | 55.0% | |
AGACGAGACGCCATGTGTAC+AGG | - | chr7_3:13619359-13619378 | None:intergenic | 55.0% | |
GTACACATGGCGTCTCGTCT+AGG | + | chr7_3:13619359-13619378 | Msa1093580:CDS | 55.0% | |
!!! | GGCTGGTGCTGATTTTGGCT+TGG | + | chr7_3:13619511-13619530 | Msa1093580:CDS | 55.0% |
TTACACTGTGCAGCTCGTCG+TGG | + | chr7_3:13619971-13619990 | Msa1093580:CDS | 55.0% | |
TGCAGCTCGTCGTGGTGATT+TGG | + | chr7_3:13619979-13619998 | Msa1093580:CDS | 55.0% | |
GCCCGTAAACTGGTACTAGG+CGG | + | chr7_3:13620235-13620254 | Msa1093580:CDS | 55.0% | |
TTTGTTGGGGCCAGTCTAGC+AGG | + | chr7_3:13620341-13620360 | Msa1093580:CDS | 55.0% | |
GCACGTTTCTCCTGCTAGAC+TGG | - | chr7_3:13620354-13620373 | None:intergenic | 55.0% | |
TGTGCTGCGAGGCAGTGTTA+GGG | + | chr7_3:13620374-13620393 | Msa1093580:CDS | 55.0% | |
!! | GCTGCTAAGCTTTGGGTGAG+GGG | + | chr7_3:13620517-13620536 | Msa1093580:CDS | 55.0% |
CGATTCTCGCGTTTCCTCCG+TGG | + | chr7_3:13615933-13615952 | Msa1093580:five_prime_UTR | 60.0% | |
! | ATTGTTGGTGAGTGCGGCGG+TGG | - | chr7_3:13615998-13616017 | None:intergenic | 60.0% |
CGGAGTGGGAGGCTTGTAGA+AGG | - | chr7_3:13616081-13616100 | None:intergenic | 60.0% | |
CTAAGGACAGATCGCCGGAG+TGG | - | chr7_3:13616096-13616115 | None:intergenic | 60.0% | |
TACCATGGGCAAGCAGGGTG+TGG | + | chr7_3:13617965-13617984 | Msa1093580:CDS | 60.0% | |
ACCATGGGCAAGCAGGGTGT+GGG | + | chr7_3:13617966-13617985 | Msa1093580:CDS | 60.0% | |
CTCTTGTGGCTGCATGCTGC+AGG | + | chr7_3:13618038-13618057 | Msa1093580:CDS | 60.0% | |
CTTGTGGCTGCATGCTGCAG+GGG | + | chr7_3:13618040-13618059 | Msa1093580:CDS | 60.0% | |
TTGTGGCTGCATGCTGCAGG+GGG | + | chr7_3:13618041-13618060 | Msa1093580:CDS | 60.0% | |
CTGCAGGGGGTTTGTCGATG+TGG | + | chr7_3:13618054-13618073 | Msa1093580:CDS | 60.0% | |
GGATGCAAGTGCGACAGACC+GGG | + | chr7_3:13618465-13618484 | Msa1093580:CDS | 60.0% | |
!! | ACTTCGTGTGGGTGCTGGAC+TGG | + | chr7_3:13619112-13619131 | Msa1093580:CDS | 60.0% |
!! | CTTCGTGTGGGTGCTGGACT+GGG | + | chr7_3:13619113-13619132 | Msa1093580:CDS | 60.0% |
GGAGTGTAGTCCTCCCCATC+TGG | - | chr7_3:13620049-13620068 | None:intergenic | 60.0% | |
GAGAAACGTGCTGTGCTGCG+AGG | + | chr7_3:13620363-13620382 | Msa1093580:CDS | 60.0% | |
CTGTGCTGCGAGGCAGTGTT+AGG | + | chr7_3:13620373-13620392 | Msa1093580:CDS | 60.0% | |
TAGGTGAGCATGCGCCACGG+AGG | - | chr7_3:13615950-13615969 | None:intergenic | 65.0% | |
! | GGTGGTGGTGAAGGGAGTGG+TGG | - | chr7_3:13615980-13615999 | None:intergenic | 65.0% |
! | AGTGCGGCGGTGGTGGTGAA+GGG | - | chr7_3:13615988-13616007 | None:intergenic | 65.0% |
CCATGGGCAAGCAGGGTGTG+GGG | + | chr7_3:13617967-13617986 | Msa1093580:CDS | 65.0% | |
! | GGCGGTGGTGGTGAAGGGAG+TGG | - | chr7_3:13615983-13616002 | None:intergenic | 70.0% |
! | GAGTGCGGCGGTGGTGGTGA+AGG | - | chr7_3:13615989-13616008 | None:intergenic | 70.0% |
! | GTTGGTGAGTGCGGCGGTGG+TGG | - | chr7_3:13615995-13616014 | None:intergenic | 70.0% |
GGACAGATCGCCGGAGTGGG+AGG | - | chr7_3:13616092-13616111 | None:intergenic | 70.0% | |
CCCCACACCCTGCTTGCCCA+TGG | - | chr7_3:13617970-13617989 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_3 | gene | 13615931 | 13620567 | 13615931 | ID=Msa1093580;Name=Msa1093580 |
chr7_3 | mRNA | 13615931 | 13620567 | 13615931 | ID=Msa1093580-mRNA-1;Parent=Msa1093580;Name=Msa1093580-mRNA-1;_AED=0.02;_eAED=0.02;_QI=85|0.33|0.25|1|1|1|4|0|758 |
chr7_3 | exon | 13615931 | 13616315 | 13615931 | ID=Msa1093580-mRNA-1:exon:3249;Parent=Msa1093580-mRNA-1 |
chr7_3 | exon | 13617818 | 13618132 | 13617818 | ID=Msa1093580-mRNA-1:exon:3250;Parent=Msa1093580-mRNA-1 |
chr7_3 | exon | 13618457 | 13618594 | 13618457 | ID=Msa1093580-mRNA-1:exon:3251;Parent=Msa1093580-mRNA-1 |
chr7_3 | exon | 13619044 | 13620567 | 13619044 | ID=Msa1093580-mRNA-1:exon:3252;Parent=Msa1093580-mRNA-1 |
chr7_3 | five_prime_UTR | 13615931 | 13616015 | 13615931 | ID=Msa1093580-mRNA-1:five_prime_utr;Parent=Msa1093580-mRNA-1 |
chr7_3 | CDS | 13616016 | 13616315 | 13616016 | ID=Msa1093580-mRNA-1:cds;Parent=Msa1093580-mRNA-1 |
chr7_3 | CDS | 13617818 | 13618132 | 13617818 | ID=Msa1093580-mRNA-1:cds;Parent=Msa1093580-mRNA-1 |
chr7_3 | CDS | 13618457 | 13618594 | 13618457 | ID=Msa1093580-mRNA-1:cds;Parent=Msa1093580-mRNA-1 |
chr7_3 | CDS | 13619044 | 13620567 | 13619044 | ID=Msa1093580-mRNA-1:cds;Parent=Msa1093580-mRNA-1 |
Gene Sequence |
Protein sequence |