Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1019680 | XP_013448594.1 | 97.209 | 215 | 6 | 0 | 1 | 215 | 376 | 590 | 2.51e-149 | 437 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1019680 | sp|Q5XI31|PIGS_RAT | 30.729 | 192 | 124 | 4 | 2 | 192 | 356 | 539 | 3.43e-17 | 82.8 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1019680 | A0A072TZI8 | 97.209 | 215 | 6 | 0 | 1 | 215 | 376 | 590 | 1.20e-149 | 437 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0137840 | Msa1019680 | 0.807966 | 3.904914e-50 | -8.615850e-47 |
Msa0184040 | Msa1019680 | 0.802395 | 5.725751e-49 | -8.615850e-47 |
Msa1019680 | Msa1244600 | 0.804997 | 1.650838e-49 | -8.615850e-47 |
Msa1019680 | Msa1356140 | 0.812425 | 4.267491e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1019680 | MtrunA17_Chr7g0235571 | 97.209 | 215 | 6 | 0 | 1 | 215 | 376 | 590 | 2.31e-153 | 437 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1019680 | AT3G07180.3 | 67.757 | 214 | 67 | 1 | 1 | 214 | 380 | 591 | 1.91e-96 | 293 |
Msa1019680 | AT3G07180.1 | 67.757 | 214 | 67 | 1 | 1 | 214 | 388 | 599 | 3.16e-96 | 292 |
Msa1019680 | AT3G07180.2 | 68.041 | 97 | 31 | 0 | 118 | 214 | 358 | 454 | 2.68e-36 | 132 |
Find 95 sgRNAs with CRISPR-Local
Find 384 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAAATCCTTTATACAGCTTT+GGG | 0.223453 | 7_1:+41702399 | None:intergenic |
TGATCTTATTGTAGGGATTT+TGG | 0.238739 | 7_1:-41704106 | Msa1019680:five_prime_UTR |
CCAAATCCTTTATACAGCTT+TGG | 0.289879 | 7_1:+41702398 | None:intergenic |
ATGATTATAATGGATGAAAT+TGG | 0.297476 | 7_1:-41699760 | Msa1019680:CDS |
CCAAAGCTGTATAAAGGATT+TGG | 0.306450 | 7_1:-41702398 | Msa1019680:CDS |
ATAAAATTAGAAATGGCATT+TGG | 0.318636 | 7_1:+41698232 | None:intergenic |
AATGGATGAAATTGGAAAAC+AGG | 0.337157 | 7_1:-41699752 | Msa1019680:intron |
AAAGATACAAGCAAGAAAAT+AGG | 0.352639 | 7_1:-41698365 | Msa1019680:CDS |
GGGCAGTTACGGCAACTTCT+TGG | 0.359643 | 7_1:-41701990 | Msa1019680:CDS |
ATTACCAAGGATGATTATAA+TGG | 0.365327 | 7_1:-41699770 | Msa1019680:CDS |
GACCTTTATGTTGGTGAGTC+TGG | 0.368121 | 7_1:-41701954 | Msa1019680:CDS |
TAAAATTAGAAATGGCATTT+GGG | 0.368826 | 7_1:+41698233 | None:intergenic |
GCTTGGATCTCTTTCTAGAT+TGG | 0.374672 | 7_1:-41699888 | Msa1019680:intron |
GGATGCAAAGCCTCAATAAC+AGG | 0.383148 | 7_1:+41704067 | None:intergenic |
ACAGGTTGAAGCTAGTTTCC+AGG | 0.386519 | 7_1:-41698284 | Msa1019680:three_prime_UTR |
CTTTCATGTGCCACAACGCT+TGG | 0.397509 | 7_1:-41699905 | Msa1019680:CDS |
GTAGTGCTGACACGGTCCTT+AGG | 0.401407 | 7_1:-41698198 | Msa1019680:three_prime_UTR |
CAGACATATGATTTCTCCTC+AGG | 0.412813 | 7_1:-41702359 | Msa1019680:intron |
GCTGACTGTGTGTAGGGAAT+TGG | 0.420206 | 7_1:-41699963 | Msa1019680:intron |
ATTCTCTTATCGCAGCTAGA+AGG | 0.425827 | 7_1:+41698391 | None:intergenic |
GACATTGATGCGGCGGCTCT+TGG | 0.429053 | 7_1:-41698152 | Msa1019680:three_prime_UTR |
TATAAAGGATTTGGAAAGTA+AGG | 0.431090 | 7_1:-41702389 | Msa1019680:CDS |
AAGTTCTCATGGGGCAGTTA+CGG | 0.431363 | 7_1:-41702001 | Msa1019680:CDS |
AGAAGGATATGCATTGTAAC+TGG | 0.441608 | 7_1:+41698408 | None:intergenic |
ATGGATGATGATCTTATTGT+AGG | 0.443136 | 7_1:-41704114 | Msa1019680:five_prime_UTR |
TCAACAGTGACATCGGCTAT+AGG | 0.447116 | 7_1:+41704046 | None:intergenic |
TAGTGCTGACACGGTCCTTA+GGG | 0.455119 | 7_1:-41698197 | Msa1019680:three_prime_UTR |
TCATCCATTATAATCATCCT+TGG | 0.457874 | 7_1:+41699766 | None:intergenic |
TAGGAAGTACTTGGCTTGGA+AGG | 0.460900 | 7_1:-41698346 | Msa1019680:CDS |
CTCCATTCGCAAGCTCTAGT+TGG | 0.461662 | 7_1:+41702586 | None:intergenic |
CGATGTCACTGTTGAAAGCC+AGG | 0.476162 | 7_1:-41704038 | Msa1019680:intron |
AGACTTGAAACCTGTTATTG+AGG | 0.481362 | 7_1:-41704077 | Msa1019680:five_prime_UTR |
TTCTAGCTGCGATAAGAGAA+TGG | 0.489632 | 7_1:-41698389 | Msa1019680:CDS |
CAACCACCTTTCAAGTGAAA+GGG | 0.490455 | 7_1:+41698104 | None:intergenic |
AAAATAGGAAGTACTTGGCT+TGG | 0.491213 | 7_1:-41698350 | Msa1019680:CDS |
GGAGAGATCTCTAAGACTAA+TGG | 0.491895 | 7_1:-41702567 | Msa1019680:five_prime_UTR |
CTCACAAGACCTCGACTACC+TGG | 0.492055 | 7_1:+41698266 | None:intergenic |
GCTCAAAATAATGCAACTGT+TGG | 0.492447 | 7_1:-41699204 | Msa1019680:CDS |
TGTGGGGAGGTGTTGTGGTA+TGG | 0.493358 | 7_1:-41702426 | Msa1019680:CDS |
TCTTTCGCTCCCTAGGAGAA+TGG | 0.497516 | 7_1:+41701926 | None:intergenic |
TGAAACCTCTTTCGCTCCCT+AGG | 0.497597 | 7_1:+41701919 | None:intergenic |
TCTGGCACATCCATTCTCCT+AGG | 0.497958 | 7_1:-41701936 | Msa1019680:CDS |
CAGGAAGAAAATGAAGACTT+TGG | 0.498770 | 7_1:+41703917 | None:intergenic |
AATTATCGATCAACAGTGAC+AGG | 0.499321 | 7_1:-41698302 | Msa1019680:three_prime_UTR |
TGCCAGACTCACCAACATAA+AGG | 0.499380 | 7_1:+41701952 | None:intergenic |
GATACTTCAGTTGCAGCTGG+TGG | 0.501022 | 7_1:-41703436 | Msa1019680:five_prime_UTR |
GCGAAAGAGGTTTCACAGAA+TGG | 0.508016 | 7_1:-41701911 | Msa1019680:intron |
TTAGATACTTCAGTTGCAGC+TGG | 0.514652 | 7_1:-41703439 | Msa1019680:five_prime_UTR |
GCAGATGTGGGGAGGTGTTG+TGG | 0.516431 | 7_1:-41702431 | Msa1019680:intron |
CATTGTTACGAGCAAATTGA+GGG | 0.522170 | 7_1:-41698078 | Msa1019680:three_prime_UTR |
ACAACCACCTTTCAAGTGAA+AGG | 0.527200 | 7_1:+41698103 | None:intergenic |
GGAATGTATGATGCTTCTGC+TGG | 0.530664 | 7_1:-41699183 | Msa1019680:intron |
TAGCTGATGGACATAATTGA+AGG | 0.531966 | 7_1:+41699005 | None:intergenic |
CTCAAATGAATAGTAGCTGA+TGG | 0.534091 | 7_1:+41698992 | None:intergenic |
TTCCCCTTTCACTTGAAAGG+TGG | 0.535543 | 7_1:-41698107 | Msa1019680:three_prime_UTR |
GCAAGAAAATAGGAAGTACT+TGG | 0.537006 | 7_1:-41698355 | Msa1019680:CDS |
CAAGCGTTGTGGCACATGAA+AGG | 0.543032 | 7_1:+41699906 | None:intergenic |
CCATTGTTACGAGCAAATTG+AGG | 0.548440 | 7_1:-41698079 | Msa1019680:three_prime_UTR |
GGAGAAATCATATGTCTGAC+TGG | 0.549427 | 7_1:+41702364 | None:intergenic |
TAAGTTTGAAGTCTGTGTGA+TGG | 0.550235 | 7_1:-41704133 | Msa1019680:five_prime_UTR |
GATCTTGAGTACTGAATATG+TGG | 0.556061 | 7_1:+41703876 | None:intergenic |
ATTCTCCTAGGGAGCGAAAG+AGG | 0.562499 | 7_1:-41701924 | Msa1019680:CDS |
ACAATAGAACATACAAAGAA+CGG | 0.567002 | 7_1:+41703851 | None:intergenic |
ATACTTCAGTTGCAGCTGGT+GGG | 0.567698 | 7_1:-41703435 | Msa1019680:five_prime_UTR |
AAGTCAGATGACCTTTATGT+TGG | 0.569066 | 7_1:-41701963 | Msa1019680:CDS |
AGAGGACACTCCTTTGCAGA+TGG | 0.569090 | 7_1:+41702609 | None:intergenic |
TGGATGATGATCTTATTGTA+GGG | 0.575734 | 7_1:-41704113 | Msa1019680:five_prime_UTR |
GTCAAAAGTATTGCAACTTG+TGG | 0.578476 | 7_1:-41703410 | Msa1019680:five_prime_UTR |
TGTCACTGTCATTCTAAACA+AGG | 0.581077 | 7_1:+41697957 | None:intergenic |
CTCCAACTAGAGCTTGCGAA+TGG | 0.584338 | 7_1:-41702588 | Msa1019680:five_prime_UTR |
AGGAAGTACTTGGCTTGGAA+GGG | 0.584866 | 7_1:-41698345 | Msa1019680:CDS |
AAATCCTTTATACAGCTTTG+GGG | 0.588176 | 7_1:+41702400 | None:intergenic |
CAGATATATTCCATCTGCAA+AGG | 0.589184 | 7_1:-41702619 | Msa1019680:five_prime_UTR |
ACGTATACTAGTTGTCCCTA+AGG | 0.591985 | 7_1:+41698182 | None:intergenic |
AATCCTTTATACAGCTTTGG+GGG | 0.592811 | 7_1:+41702401 | None:intergenic |
CTGGCACATCCATTCTCCTA+GGG | 0.593812 | 7_1:-41701935 | Msa1019680:CDS |
CCTCAATTTGCTCGTAACAA+TGG | 0.601661 | 7_1:+41698079 | None:intergenic |
TCTTCCTGGGATGACGAGCA+TGG | 0.604602 | 7_1:-41703902 | Msa1019680:five_prime_UTR |
AGCTAGTTTCCAGGTAGTCG+AGG | 0.606107 | 7_1:-41698275 | Msa1019680:three_prime_UTR |
CTGGCTTTCAACAGTGACAT+CGG | 0.614755 | 7_1:+41704039 | None:intergenic |
CTTCAGTTGCAGCTGGTGGG+AGG | 0.616847 | 7_1:-41703432 | Msa1019680:five_prime_UTR |
AAATGACAGTAGTGCTGACA+CGG | 0.617382 | 7_1:-41698206 | Msa1019680:three_prime_UTR |
AACCACCTTTCAAGTGAAAG+GGG | 0.617954 | 7_1:+41698105 | None:intergenic |
TTCGCAAGCTCTAGTTGGAG+AGG | 0.620379 | 7_1:+41702591 | None:intergenic |
AACAGGTGAATTCTAATGAG+TGG | 0.622364 | 7_1:-41703465 | Msa1019680:intron |
TGCAGGTACAATCATTACCA+AGG | 0.629331 | 7_1:-41699783 | Msa1019680:intron |
AAGGCAATCAAGATCTCTTG+CGG | 0.631831 | 7_1:-41699045 | Msa1019680:CDS |
AGAAAGAGATCCAAGCGTTG+TGG | 0.636450 | 7_1:+41699895 | None:intergenic |
GGGAATTGGATGTCTTGTCA+AGG | 0.639791 | 7_1:-41699949 | Msa1019680:CDS |
ATACTATTGCAGATGTGGGG+AGG | 0.641438 | 7_1:-41702439 | Msa1019680:intron |
GCAACAAGACATTGATGCGG+CGG | 0.653634 | 7_1:-41698159 | Msa1019680:three_prime_UTR |
GCAATCAAGATCTCTTGCGG+AGG | 0.670297 | 7_1:-41699042 | Msa1019680:CDS |
TCTATACTATTGCAGATGTG+GGG | 0.681956 | 7_1:-41702442 | Msa1019680:intron |
AAAATGAAGACTTTGGTGTG+TGG | 0.709097 | 7_1:+41703924 | None:intergenic |
CGTGCAACAAGACATTGATG+CGG | 0.753447 | 7_1:-41698162 | Msa1019680:three_prime_UTR |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TGTACTTATTTTTATTTTTT+TGG | - | chr7_1:41699617-41699636 | Msa1019680:intron | 10.0% |
!! | GATTTACTTTAAATAAATAA+TGG | - | chr7_1:41699908-41699927 | Msa1019680:CDS | 10.0% |
!!! | AATTATTATTTTTTAAACAC+AGG | - | chr7_1:41700691-41700710 | Msa1019680:intron | 10.0% |
!! | AAGATATAAATATAACAATT+CGG | - | chr7_1:41700955-41700974 | Msa1019680:intron | 10.0% |
!! | TAATTAAAATATTCAATTAG+CGG | - | chr7_1:41701150-41701169 | Msa1019680:intron | 10.0% |
!!! | TTTTTTTTTTAAATGTTGTT+GGG | + | chr7_1:41701785-41701804 | None:intergenic | 10.0% |
!!! | TTTTTTTTTTTAAATGTTGT+TGG | + | chr7_1:41701786-41701805 | None:intergenic | 10.0% |
!! | TTTATTGTTATGAATAATAT+AGG | + | chr7_1:41701811-41701830 | None:intergenic | 10.0% |
!! | TCTAAAAAAAATTATTATGA+TGG | + | chr7_1:41702628-41702647 | None:intergenic | 10.0% |
!!! | ATTTTTTATATCAATTAATC+AGG | + | chr7_1:41702793-41702812 | None:intergenic | 10.0% |
!! | AAAATCTTATCAAAATAAAT+AGG | + | chr7_1:41703352-41703371 | None:intergenic | 10.0% |
!! | ATTATTAAGTATTAATGAAT+TGG | - | chr7_1:41703402-41703421 | Msa1019680:intron | 10.0% |
!!! | ATTTTCAATAAAATTAGAAA+TGG | + | chr7_1:41703900-41703919 | None:intergenic | 10.0% |
!! | ATAAGTATAACATAGTTAAA+AGG | + | chr7_1:41699481-41699500 | None:intergenic | 15.0% |
!!! | TTTTACTTTTTCTCATTAAT+TGG | - | chr7_1:41699786-41699805 | Msa1019680:intron | 15.0% |
!! | ATATGTGAGTATAAAAATAA+TGG | + | chr7_1:41700314-41700333 | None:intergenic | 15.0% |
!! | TTGCTAAATATATATCTTTA+AGG | - | chr7_1:41700345-41700364 | Msa1019680:intron | 15.0% |
!! | TGCTAAATATATATCTTTAA+GGG | - | chr7_1:41700346-41700365 | Msa1019680:intron | 15.0% |
!!! | TATATTTTTTATATTCCACA+TGG | - | chr7_1:41700395-41700414 | Msa1019680:intron | 15.0% |
!! | ATCCTATTCTATTATTATTT+AGG | + | chr7_1:41700428-41700447 | None:intergenic | 15.0% |
!! | ATACAATAACATTTAATGTA+GGG | - | chr7_1:41700797-41700816 | Msa1019680:intron | 15.0% |
!!! | AATTTTGTAATACAATTATG+TGG | - | chr7_1:41701647-41701666 | Msa1019680:intron | 15.0% |
!!! | AAATGAAACAATTTTCAATT+AGG | + | chr7_1:41701759-41701778 | None:intergenic | 15.0% |
!!! | CTTTGAAAATTATATAGAAT+TGG | - | chr7_1:41701840-41701859 | Msa1019680:intron | 15.0% |
!!! | AAAAAACTATTCTTTCATTT+TGG | + | chr7_1:41701958-41701977 | None:intergenic | 15.0% |
!!! | TGTTTTAAATGTTTATTGTT+GGG | - | chr7_1:41702290-41702309 | Msa1019680:intron | 15.0% |
!!! | ATGATATTCATTTTCTAATT+TGG | - | chr7_1:41702693-41702712 | Msa1019680:intron | 15.0% |
!!! | TGATATTCATTTTCTAATTT+GGG | - | chr7_1:41702694-41702713 | Msa1019680:intron | 15.0% |
!! | GAATATATTTCTTGTATTTA+TGG | + | chr7_1:41703202-41703221 | None:intergenic | 15.0% |
!! | TTATGAATATCAAAATGTAA+TGG | + | chr7_1:41703284-41703303 | None:intergenic | 15.0% |
!! | TTTCACATATACAACAAAAA+AGG | + | chr7_1:41698527-41698546 | None:intergenic | 20.0% |
!! | AAATATGAAAAGGAAAGAAA+AGG | + | chr7_1:41698563-41698582 | None:intergenic | 20.0% |
!!! | TCAGTTTATATTTTTAGCAT+CGG | - | chr7_1:41698793-41698812 | Msa1019680:intron | 20.0% |
!!! | ATAATGGATATACTTTTGTT+TGG | - | chr7_1:41699924-41699943 | Msa1019680:CDS | 20.0% |
!! | TGTATAACTGTAGAAATAAA+TGG | + | chr7_1:41700013-41700032 | None:intergenic | 20.0% |
!! | TCATATGTTTACACAATAAT+GGG | - | chr7_1:41700276-41700295 | Msa1019680:intron | 20.0% |
!! | GCTAAATATATATCTTTAAG+GGG | - | chr7_1:41700347-41700366 | Msa1019680:intron | 20.0% |
!! | GTCCTAAATAATAATAGAAT+AGG | - | chr7_1:41700423-41700442 | Msa1019680:intron | 20.0% |
!! | GATACAATAACATTTAATGT+AGG | - | chr7_1:41700796-41700815 | Msa1019680:intron | 20.0% |
!! | AAAAATCGAATTCTTTAACT+AGG | + | chr7_1:41700834-41700853 | None:intergenic | 20.0% |
!! | TTCATGAACTTTGAATTATT+TGG | - | chr7_1:41701096-41701115 | Msa1019680:intron | 20.0% |
!! | CATATTTATTACTACTAAGT+TGG | - | chr7_1:41701242-41701261 | Msa1019680:intron | 20.0% |
!! | ATTATGTGGTACAAAAATTA+CGG | + | chr7_1:41701390-41701409 | None:intergenic | 20.0% |
!!! | GATTTTGTAATACAATTATG+TGG | + | chr7_1:41701404-41701423 | None:intergenic | 20.0% |
!!! | TTAATTTTGATGTAACTCAT+TGG | + | chr7_1:41701502-41701521 | None:intergenic | 20.0% |
!! | CAACAAAATTTGACATTAAT+TGG | + | chr7_1:41701589-41701608 | None:intergenic | 20.0% |
!!! | TTATTTTGTTTTTTCAGCAA+AGG | - | chr7_1:41701694-41701713 | Msa1019680:intron | 20.0% |
!! | TTCATGAAGTTATCAAATAA+GGG | + | chr7_1:41701876-41701895 | None:intergenic | 20.0% |
!! | ATTCATGAAGTTATCAAATA+AGG | + | chr7_1:41701877-41701896 | None:intergenic | 20.0% |
!! | GTTTAAATGATTATGTTTCA+TGG | + | chr7_1:41702044-41702063 | None:intergenic | 20.0% |
!! | ACTTCAAAAATAATTCTTGT+GGG | - | chr7_1:41702137-41702156 | Msa1019680:intron | 20.0% |
!!! | CTGTTTTAAATGTTTATTGT+TGG | - | chr7_1:41702289-41702308 | Msa1019680:intron | 20.0% |
!!! | GTTTTAAATGTTTATTGTTG+GGG | - | chr7_1:41702291-41702310 | Msa1019680:intron | 20.0% |
!!! | ATGATTATAATGGATGAAAT+TGG | - | chr7_1:41702362-41702381 | Msa1019680:CDS | 20.0% |
!!! | ATTTTAGTTAAGAGTTTGTT+AGG | - | chr7_1:41702444-41702463 | Msa1019680:intron | 20.0% |
!!! | GTTACTAATAGTATTGAATA+TGG | - | chr7_1:41702599-41702618 | Msa1019680:five_prime_UTR | 20.0% |
!! | AAAAGATAAACATCATAAGT+TGG | + | chr7_1:41703042-41703061 | None:intergenic | 20.0% |
!! | TATATTCTTGCTTATATTGA+TGG | - | chr7_1:41703215-41703234 | Msa1019680:intron | 20.0% |
!! | TAAAATTAGAAATGGCATTT+GGG | + | chr7_1:41703892-41703911 | None:intergenic | 20.0% |
!! | ATAAAATTAGAAATGGCATT+TGG | + | chr7_1:41703893-41703912 | None:intergenic | 20.0% |
! | ACAATAGAACATACAAAGAA+CGG | + | chr7_1:41698274-41698293 | None:intergenic | 25.0% |
!! | TGTTGCAAACTTTTATCAAT+TGG | - | chr7_1:41698360-41698379 | Msa1019680:CDS | 25.0% |
!! | ACTTTTATCAATTGGATAGT+TGG | - | chr7_1:41698368-41698387 | Msa1019680:CDS | 25.0% |
! | ACGTCAAATGAAATATGAAA+AGG | + | chr7_1:41698573-41698592 | None:intergenic | 25.0% |
! | TGAATGTTTAAATCTTGAAC+AGG | - | chr7_1:41698640-41698659 | Msa1019680:intron | 25.0% |
! | AGCATAATCAGAAATTTAGA+TGG | + | chr7_1:41699023-41699042 | None:intergenic | 25.0% |
! | ATCTAAATTTCTGATTATGC+TGG | - | chr7_1:41699022-41699041 | Msa1019680:CDS | 25.0% |
!!! | TCTAGAATAAATTTTGCTCT+TGG | - | chr7_1:41699321-41699340 | Msa1019680:intron | 25.0% |
!! | CTAGAATAAATTTTGCTCTT+GGG | - | chr7_1:41699322-41699341 | Msa1019680:intron | 25.0% |
!!! | AATAAGTACAGAAGTTTTGA+AGG | + | chr7_1:41699607-41699626 | None:intergenic | 25.0% |
! | TATAAAGGATTTGGAAAGTA+AGG | - | chr7_1:41699733-41699752 | Msa1019680:intron | 25.0% |
! | TTAATGACATCAACAATAGA+GGG | + | chr7_1:41700042-41700061 | None:intergenic | 25.0% |
! | ATTAATGACATCAACAATAG+AGG | + | chr7_1:41700043-41700062 | None:intergenic | 25.0% |
! | CATCATGATTTCAAAACTAT+AGG | + | chr7_1:41700250-41700269 | None:intergenic | 25.0% |
! | GTCATATGTTTACACAATAA+TGG | - | chr7_1:41700275-41700294 | Msa1019680:intron | 25.0% |
!! | GGCATATTTTTCATTTAACT+CGG | - | chr7_1:41700736-41700755 | Msa1019680:intron | 25.0% |
!!! | TCTGTTTTTTCATGAAAGTT+GGG | + | chr7_1:41700778-41700797 | None:intergenic | 25.0% |
!!! | ATCTGTTTTTTCATGAAAGT+TGG | + | chr7_1:41700779-41700798 | None:intergenic | 25.0% |
! | AAAGATTTGTGATTATTGAC+GGG | + | chr7_1:41700917-41700936 | None:intergenic | 25.0% |
! | GAAAGATTTGTGATTATTGA+CGG | + | chr7_1:41700918-41700937 | None:intergenic | 25.0% |
! | AGTTATAATTCAAGTCTTAG+AGG | - | chr7_1:41700982-41701001 | Msa1019680:intron | 25.0% |
!! | TTTGTTTCCTTGATTTTTGT+TGG | - | chr7_1:41701015-41701034 | Msa1019680:intron | 25.0% |
! | ATAACAAAATAATGTGGACA+GGG | + | chr7_1:41701180-41701199 | None:intergenic | 25.0% |
! | GCAATATATATATATCACCA+TGG | - | chr7_1:41701340-41701359 | Msa1019680:intron | 25.0% |
! | ATTTATTAAGTTTGACACCA+TGG | + | chr7_1:41701360-41701379 | None:intergenic | 25.0% |
!!! | GATAATAGCTTTAAATCCAA+AGG | + | chr7_1:41701429-41701448 | None:intergenic | 25.0% |
!! | GATAATAGTTTTCAATCCAA+CGG | - | chr7_1:41701622-41701641 | Msa1019680:intron | 25.0% |
!!! | TATTGTTTAATTTGACACCA+TGG | - | chr7_1:41701722-41701741 | Msa1019680:intron | 25.0% |
!!! | TATCGACAGTTTTATACATT+TGG | + | chr7_1:41702001-41702020 | None:intergenic | 25.0% |
! | ATAATCATTTAAACCATGCT+GGG | - | chr7_1:41702050-41702069 | Msa1019680:intron | 25.0% |
! | CACTTCAAAAATAATTCTTG+TGG | - | chr7_1:41702136-41702155 | Msa1019680:intron | 25.0% |
! | ATTACCAAGGATGATTATAA+TGG | - | chr7_1:41702352-41702371 | Msa1019680:intron | 25.0% |
! | ATGAATATAACAATTCCGTT+TGG | - | chr7_1:41702749-41702768 | Msa1019680:intron | 25.0% |
! | TCGTTTACTAACTAAATATG+AGG | + | chr7_1:41702822-41702841 | None:intergenic | 25.0% |
! | CATAATTGAAGGATGAAAAA+AGG | + | chr7_1:41703109-41703128 | None:intergenic | 25.0% |
!!! | TCAAAATGTAATGGATAATC+TGG | + | chr7_1:41703275-41703294 | None:intergenic | 25.0% |
!! | AAATAGGAATTACGTTTTCA+TGG | + | chr7_1:41703336-41703355 | None:intergenic | 25.0% |
! | AGAATAAATACAAGGCTAAA+AGG | + | chr7_1:41703481-41703500 | None:intergenic | 25.0% |
! | ACAACGAAAGAATAAATACA+AGG | + | chr7_1:41703489-41703508 | None:intergenic | 25.0% |
!! | TCTGAAATTGTACCAATATT+AGG | - | chr7_1:41703594-41703613 | Msa1019680:intron | 25.0% |
! | AATTCTCATGAACCTAATAT+TGG | + | chr7_1:41703609-41703628 | None:intergenic | 25.0% |
! | AAAGATACAAGCAAGAAAAT+AGG | - | chr7_1:41703757-41703776 | Msa1019680:intron | 25.0% |
ATGGATGATGATCTTATTGT+AGG | - | chr7_1:41698008-41698027 | Msa1019680:three_prime_UTR | 30.0% | |
TGGATGATGATCTTATTGTA+GGG | - | chr7_1:41698009-41698028 | Msa1019680:three_prime_UTR | 30.0% | |
! | TGATCTTATTGTAGGGATTT+TGG | - | chr7_1:41698016-41698035 | Msa1019680:three_prime_UTR | 30.0% |
! | ATTGCTCTTATTTGATTGTC+AGG | - | chr7_1:41698168-41698187 | Msa1019680:three_prime_UTR | 30.0% |
! | AAAGTCTTCATTTTCTTCCT+GGG | - | chr7_1:41698207-41698226 | Msa1019680:three_prime_UTR | 30.0% |
ACATCACAAGATAAGATACA+TGG | + | chr7_1:41698343-41698362 | None:intergenic | 30.0% | |
AAAAAAGGACTCGCATAAAT+TGG | + | chr7_1:41698512-41698531 | None:intergenic | 30.0% | |
!!! | ACTGCTTAAAGACTAGTTTT+AGG | - | chr7_1:41699250-41699269 | Msa1019680:intron | 30.0% |
CATCTGCAATAGTATAGAAT+AGG | + | chr7_1:41699678-41699697 | None:intergenic | 30.0% | |
ATTCTATACTATTGCAGATG+TGG | - | chr7_1:41699678-41699697 | Msa1019680:intron | 30.0% | |
TTCTATACTATTGCAGATGT+GGG | - | chr7_1:41699679-41699698 | Msa1019680:intron | 30.0% | |
AAATCCTTTATACAGCTTTG+GGG | + | chr7_1:41699725-41699744 | None:intergenic | 30.0% | |
CAAATCCTTTATACAGCTTT+GGG | + | chr7_1:41699726-41699745 | None:intergenic | 30.0% | |
ATGAGAAAAAGTAAAACCTG+AGG | + | chr7_1:41699782-41699801 | None:intergenic | 30.0% | |
!! | ATGGATATACTTTTGTTTGG+AGG | - | chr7_1:41699927-41699946 | Msa1019680:CDS | 30.0% |
TAGCATTCATATACTGAAAC+AGG | - | chr7_1:41700080-41700099 | Msa1019680:intron | 30.0% | |
!!! | AAGCTTTTTGAAGTTCTCAT+GGG | - | chr7_1:41700111-41700130 | Msa1019680:intron | 30.0% |
!!! | TAGTTTTGAAATCATGATGC+TGG | - | chr7_1:41700251-41700270 | Msa1019680:intron | 30.0% |
ATGGAATACAAAGCTTGATT+GGG | - | chr7_1:41700480-41700499 | Msa1019680:intron | 30.0% | |
TCATGAAAGTTGGGATAAAA+AGG | + | chr7_1:41700769-41700788 | None:intergenic | 30.0% | |
AAGATTTGTGATTATTGACG+GGG | + | chr7_1:41700916-41700935 | None:intergenic | 30.0% | |
GTAAGTACCAACAAAAATCA+AGG | + | chr7_1:41701025-41701044 | None:intergenic | 30.0% | |
GATAACAAAATAATGTGGAC+AGG | + | chr7_1:41701181-41701200 | None:intergenic | 30.0% | |
ACTGGGATAACAAAATAATG+TGG | + | chr7_1:41701186-41701205 | None:intergenic | 30.0% | |
!! | TTATTTTGTTATCCCAGTTC+TGG | - | chr7_1:41701188-41701207 | Msa1019680:intron | 30.0% |
!! | TATTTTGTTATCCCAGTTCT+GGG | - | chr7_1:41701189-41701208 | Msa1019680:intron | 30.0% |
TGTATTACAAAATCCACCTT+TGG | - | chr7_1:41701410-41701429 | Msa1019680:intron | 30.0% | |
!! | AATAGCTTTAAATCCAAAGG+TGG | + | chr7_1:41701426-41701445 | None:intergenic | 30.0% |
TGTATTACAAAATTCACCGT+TGG | + | chr7_1:41701641-41701660 | None:intergenic | 30.0% | |
CATAATCATTTAAACCATGC+TGG | - | chr7_1:41702049-41702068 | Msa1019680:intron | 30.0% | |
! | GTTTAACTCTTATTTCTTGC+AGG | - | chr7_1:41702322-41702341 | Msa1019680:intron | 30.0% |
TCATCCATTATAATCATCCT+TGG | + | chr7_1:41702359-41702378 | None:intergenic | 30.0% | |
AATGGATGAAATTGGAAAAC+AGG | - | chr7_1:41702370-41702389 | Msa1019680:CDS | 30.0% | |
AGGAATTAGTTAGTTGCATA+TGG | - | chr7_1:41702464-41702483 | Msa1019680:intron | 30.0% | |
!! | TCCAATATAAGTGTTGGAAA+GGG | + | chr7_1:41702578-41702597 | None:intergenic | 30.0% |
!! | ATCCAATATAAGTGTTGGAA+AGG | + | chr7_1:41702579-41702598 | None:intergenic | 30.0% |
GTAACATCCAATATAAGTGT+TGG | + | chr7_1:41702584-41702603 | None:intergenic | 30.0% | |
ATGTAATTGTACACACCAAA+CGG | + | chr7_1:41702767-41702786 | None:intergenic | 30.0% | |
TTAGCGATAAGTCTCAAAAA+AGG | + | chr7_1:41702969-41702988 | None:intergenic | 30.0% | |
! | TTTTCTTGTCAGTATCATCA+AGG | - | chr7_1:41703058-41703077 | Msa1019680:intron | 30.0% |
!! | GCATTGTTTTGCTATCTATT+CGG | - | chr7_1:41703152-41703171 | Msa1019680:intron | 30.0% |
! | TCCATCATGACATCTTTTAT+GGG | + | chr7_1:41703441-41703460 | None:intergenic | 30.0% |
! | TTCCATCATGACATCTTTTA+TGG | + | chr7_1:41703442-41703461 | None:intergenic | 30.0% |
! | AAGATGTCATGATGGAAAAT+TGG | - | chr7_1:41703445-41703464 | Msa1019680:five_prime_UTR | 30.0% |
CCATAAAAACAGAACTTACA+CGG | + | chr7_1:41703556-41703575 | None:intergenic | 30.0% | |
!!! | GTTCTGTTTTTATGGACTTA+CGG | - | chr7_1:41703561-41703580 | Msa1019680:intron | 30.0% |
ATTGTAACTGGCAGAAAAAA+TGG | + | chr7_1:41703705-41703724 | None:intergenic | 30.0% | |
! | TAAGTTTGAAGTCTGTGTGA+TGG | - | chr7_1:41697989-41698008 | Msa1019680:intron | 35.0% |
AGACTTGAAACCTGTTATTG+AGG | - | chr7_1:41698045-41698064 | Msa1019680:three_prime_UTR | 35.0% | |
GTCTTGCAACTTCTACAATT+AGG | + | chr7_1:41698118-41698137 | None:intergenic | 35.0% | |
! | AAAATGAAGACTTTGGTGTG+TGG | + | chr7_1:41698201-41698220 | None:intergenic | 35.0% |
CAGGAAGAAAATGAAGACTT+TGG | + | chr7_1:41698208-41698227 | None:intergenic | 35.0% | |
! | CAAAGTCTTCATTTTCTTCC+TGG | - | chr7_1:41698206-41698225 | Msa1019680:three_prime_UTR | 35.0% |
!! | GATCTTGAGTACTGAATATG+TGG | + | chr7_1:41698249-41698268 | None:intergenic | 35.0% |
GCTAATATGTCAGATGATCT+GGG | + | chr7_1:41698406-41698425 | None:intergenic | 35.0% | |
TGCTAATATGTCAGATGATC+TGG | + | chr7_1:41698407-41698426 | None:intergenic | 35.0% | |
AGATCATCTGACATATTAGC+AGG | - | chr7_1:41698406-41698425 | Msa1019680:CDS | 35.0% | |
TGTATGTGTCTCTGTTTCAT+TGG | - | chr7_1:41698485-41698504 | Msa1019680:intron | 35.0% | |
TCATTTGACGTCTCTTGTAA+TGG | - | chr7_1:41698582-41698601 | Msa1019680:intron | 35.0% | |
AACAGGTGAATTCTAATGAG+TGG | - | chr7_1:41698657-41698676 | Msa1019680:intron | 35.0% | |
!! | GTCAAAAGTATTGCAACTTG+TGG | - | chr7_1:41698712-41698731 | Msa1019680:intron | 35.0% |
AACTTTATCCAGAGATCACA+CGG | + | chr7_1:41698853-41698872 | None:intergenic | 35.0% | |
TGTGATTCTACAAAAGGACA+TGG | + | chr7_1:41698947-41698966 | None:intergenic | 35.0% | |
GTAGGATGTGATTCTACAAA+AGG | + | chr7_1:41698953-41698972 | None:intergenic | 35.0% | |
ACCCAAATTAGTTAAGCCTA+GGG | + | chr7_1:41699000-41699019 | None:intergenic | 35.0% | |
CTAACATCAGTATGGTTACT+TGG | + | chr7_1:41699054-41699073 | None:intergenic | 35.0% | |
TTAGACCTGTTCCTATAGTA+GGG | - | chr7_1:41699070-41699089 | Msa1019680:intron | 35.0% | |
AATGTCATACTCCAAAGAAG+TGG | - | chr7_1:41699119-41699138 | Msa1019680:intron | 35.0% | |
GATAAGATAACAGTAGTAGC+AGG | - | chr7_1:41699291-41699310 | Msa1019680:intron | 35.0% | |
TTCGTGAGAATCACAAAGAT+AGG | + | chr7_1:41699444-41699463 | None:intergenic | 35.0% | |
CAGATATATTCCATCTGCAA+AGG | - | chr7_1:41699503-41699522 | Msa1019680:intron | 35.0% | |
TTGAAGGTCAGAGAAATAAC+TGG | + | chr7_1:41699591-41699610 | None:intergenic | 35.0% | |
TCTTCGTAAGTTAACTGCTT+AGG | + | chr7_1:41699654-41699673 | None:intergenic | 35.0% | |
TCTATACTATTGCAGATGTG+GGG | - | chr7_1:41699680-41699699 | Msa1019680:intron | 35.0% | |
! | AATCCTTTATACAGCTTTGG+GGG | + | chr7_1:41699724-41699743 | None:intergenic | 35.0% |
CCAAATCCTTTATACAGCTT+TGG | + | chr7_1:41699727-41699746 | None:intergenic | 35.0% | |
CCAAAGCTGTATAAAGGATT+TGG | - | chr7_1:41699724-41699743 | Msa1019680:intron | 35.0% | |
ACAAAGTTGCTTCTCATTGT+TGG | - | chr7_1:41699836-41699855 | Msa1019680:intron | 35.0% | |
TCATTGTTGGATCAGTACTT+TGG | - | chr7_1:41699849-41699868 | Msa1019680:intron | 35.0% | |
GTTCCATGTATGATACACTT+AGG | - | chr7_1:41699880-41699899 | Msa1019680:intron | 35.0% | |
TGTCCTAAGTGTATCATACA+TGG | + | chr7_1:41699886-41699905 | None:intergenic | 35.0% | |
TGAGAACTTCAAAAAGCTTC+TGG | + | chr7_1:41700110-41700129 | None:intergenic | 35.0% | |
!!! | GAAGCTTTTTGAAGTTCTCA+TGG | - | chr7_1:41700110-41700129 | Msa1019680:intron | 35.0% |
!!! | AGCTTTTTGAAGTTCTCATG+GGG | - | chr7_1:41700112-41700131 | Msa1019680:intron | 35.0% |
AAGTCAGATGACCTTTATGT+TGG | - | chr7_1:41700159-41700178 | Msa1019680:intron | 35.0% | |
! | TATTTAGGACACATTCCATG+TGG | + | chr7_1:41700413-41700432 | None:intergenic | 35.0% |
CATGGAATACAAAGCTTGAT+TGG | - | chr7_1:41700479-41700498 | Msa1019680:intron | 35.0% | |
! | ACGTCTGTTTTACAGTTTCA+GGG | - | chr7_1:41700659-41700678 | Msa1019680:intron | 35.0% |
TATCTGTGTTCGGATTTAGA+AGG | + | chr7_1:41700861-41700880 | None:intergenic | 35.0% | |
!! | ATTTTGTTATCCCAGTTCTG+GGG | - | chr7_1:41701190-41701209 | Msa1019680:intron | 35.0% |
AAGTTGGAAGCAATTTAGAG+TGG | - | chr7_1:41701258-41701277 | Msa1019680:intron | 35.0% | |
CACAAAACAGCAGAAAATGT+AGG | + | chr7_1:41701319-41701338 | None:intergenic | 35.0% | |
ATGTGGTACAAAAATTACGG+AGG | + | chr7_1:41701387-41701406 | None:intergenic | 35.0% | |
ATGTGGTACAGAATTATCGT+AGG | - | chr7_1:41701664-41701683 | Msa1019680:intron | 35.0% | |
ATTAGGATCAATTGACACCA+TGG | + | chr7_1:41701742-41701761 | None:intergenic | 35.0% | |
ATCCATTAAAGTTACCGTTG+TGG | - | chr7_1:41702077-41702096 | Msa1019680:intron | 35.0% | |
TCCATTAAAGTTACCGTTGT+GGG | - | chr7_1:41702078-41702097 | Msa1019680:intron | 35.0% | |
AATGAATAACCATCCCACAA+CGG | + | chr7_1:41702094-41702113 | None:intergenic | 35.0% | |
TCCCTTTCCAACACTTATAT+TGG | - | chr7_1:41702574-41702593 | Msa1019680:five_prime_UTR | 35.0% | |
!! | GATGTTTTCCTCTTGCTTTT+AGG | - | chr7_1:41702652-41702671 | Msa1019680:intron | 35.0% |
TCTTCATACCTAAAAGCAAG+AGG | + | chr7_1:41702663-41702682 | None:intergenic | 35.0% | |
GCTCAAAATAATGCAACTGT+TGG | - | chr7_1:41702918-41702937 | Msa1019680:intron | 35.0% | |
TTAACTCGACGATGATTTAG+AGG | - | chr7_1:41703003-41703022 | Msa1019680:intron | 35.0% | |
! | TAGCTGATGGACATAATTGA+AGG | + | chr7_1:41703120-41703139 | None:intergenic | 35.0% |
CTCAAATGAATAGTAGCTGA+TGG | + | chr7_1:41703133-41703152 | None:intergenic | 35.0% | |
ATGGCAGAGAGAAAAGTTAA+AGG | + | chr7_1:41703183-41703202 | None:intergenic | 35.0% | |
GGATAATCTGGTCAATATGA+AGG | + | chr7_1:41703263-41703282 | None:intergenic | 35.0% | |
TTAATGAATTGGAAGAGCCA+TGG | - | chr7_1:41703413-41703432 | Msa1019680:five_prime_UTR | 35.0% | |
ACACGGTTGGCAAAAAAAAA+AGG | + | chr7_1:41703539-41703558 | None:intergenic | 35.0% | |
AAAAACAGAACTTACACGGT+TGG | + | chr7_1:41703552-41703571 | None:intergenic | 35.0% | |
!!! | CCGTGTAAGTTCTGTTTTTA+TGG | - | chr7_1:41703553-41703572 | Msa1019680:intron | 35.0% |
AGAAGGATATGCATTGTAAC+TGG | + | chr7_1:41703717-41703736 | None:intergenic | 35.0% | |
!! | GCAAGAAAATAGGAAGTACT+TGG | - | chr7_1:41703767-41703786 | Msa1019680:intron | 35.0% |
!! | AAAATAGGAAGTACTTGGCT+TGG | - | chr7_1:41703772-41703791 | Msa1019680:intron | 35.0% |
AATTATCGATCAACAGTGAC+AGG | - | chr7_1:41703820-41703839 | Msa1019680:intron | 35.0% | |
! | TTTTTCCCCTTTCACTTGAA+AGG | - | chr7_1:41704012-41704031 | Msa1019680:intron | 35.0% |
CATTGTTACGAGCAAATTGA+GGG | - | chr7_1:41704044-41704063 | Msa1019680:five_prime_UTR | 35.0% | |
TGTCATTCTAAACAAGGCTT+TGG | + | chr7_1:41704162-41704181 | None:intergenic | 35.0% | |
TGTCACTGTCATTCTAAACA+AGG | + | chr7_1:41704168-41704187 | None:intergenic | 35.0% | |
TACAATTAGGAGACTTCACC+TGG | + | chr7_1:41698105-41698124 | None:intergenic | 40.0% | |
GCAAGACTCATTGTATGCTT+TGG | - | chr7_1:41698131-41698150 | Msa1019680:three_prime_UTR | 40.0% | |
AATATGTCAGATGATCTGGG+TGG | + | chr7_1:41698403-41698422 | None:intergenic | 40.0% | |
CAGAGACACATACATAACTC+AGG | + | chr7_1:41698479-41698498 | None:intergenic | 40.0% | |
TTAGATACTTCAGTTGCAGC+TGG | - | chr7_1:41698683-41698702 | Msa1019680:intron | 40.0% | |
GTGTGATCTCTGGATAAAGT+TGG | - | chr7_1:41698852-41698871 | Msa1019680:intron | 40.0% | |
TATATAAACTGCAGCACCAC+TGG | - | chr7_1:41698875-41698894 | Msa1019680:intron | 40.0% | |
TGGAACCTATGAGGTACATT+GGG | + | chr7_1:41698927-41698946 | None:intergenic | 40.0% | |
ATGGAACCTATGAGGTACAT+TGG | + | chr7_1:41698928-41698947 | None:intergenic | 40.0% | |
AAAAGGACATGGAACCTATG+AGG | + | chr7_1:41698936-41698955 | None:intergenic | 40.0% | |
TGCCCTAGGCTTAACTAATT+TGG | - | chr7_1:41698995-41699014 | Msa1019680:CDS | 40.0% | |
GCCCTAGGCTTAACTAATTT+GGG | - | chr7_1:41698996-41699015 | Msa1019680:CDS | 40.0% | |
GACCCAAATTAGTTAAGCCT+AGG | + | chr7_1:41699001-41699020 | None:intergenic | 40.0% | |
GAACAGGTCTAACATCAGTA+TGG | + | chr7_1:41699062-41699081 | None:intergenic | 40.0% | |
GTTAGACCTGTTCCTATAGT+AGG | - | chr7_1:41699069-41699088 | Msa1019680:intron | 40.0% | |
ATCACAATCAGCATGATCTC+TGG | + | chr7_1:41699171-41699190 | None:intergenic | 40.0% | |
AGACAGACACAAACTACAAG+TGG | + | chr7_1:41699201-41699220 | None:intergenic | 40.0% | |
!! | GGAGAGATCTCTAAGACTAA+TGG | - | chr7_1:41699555-41699574 | Msa1019680:intron | 40.0% |
GGAGAAATCATATGTCTGAC+TGG | + | chr7_1:41699761-41699780 | None:intergenic | 40.0% | |
CAGACATATGATTTCTCCTC+AGG | - | chr7_1:41699763-41699782 | Msa1019680:CDS | 40.0% | |
GAATAGGATTAAGACCCACT+TGG | - | chr7_1:41700439-41700458 | Msa1019680:intron | 40.0% | |
ACAACTACCACTACTACCTT+AGG | - | chr7_1:41700508-41700527 | Msa1019680:intron | 40.0% | |
TTGACAACCTAAGGTAGTAG+TGG | + | chr7_1:41700518-41700537 | None:intergenic | 40.0% | |
! | GTGCTACTATTGACAACCTA+AGG | + | chr7_1:41700527-41700546 | None:intergenic | 40.0% |
GCTACTATTCCGTAACACAT+CGG | + | chr7_1:41700573-41700592 | None:intergenic | 40.0% | |
CTGGTTGAACATTATCAGAC+CGG | - | chr7_1:41700622-41700641 | Msa1019680:intron | 40.0% | |
AAACTGTAAAACAGACGTGC+GGG | + | chr7_1:41700657-41700676 | None:intergenic | 40.0% | |
GAAACTGTAAAACAGACGTG+CGG | + | chr7_1:41700658-41700677 | None:intergenic | 40.0% | |
! | CACGTCTGTTTTACAGTTTC+AGG | - | chr7_1:41700658-41700677 | Msa1019680:intron | 40.0% |
CAAAATAATGTGGACAGGGA+TGG | + | chr7_1:41701176-41701195 | None:intergenic | 40.0% | |
TTGTCAATCCCAAATAGCTG+CGG | + | chr7_1:41701222-41701241 | None:intergenic | 40.0% | |
!! | TTAATGGATTCAACCCAGCA+TGG | + | chr7_1:41702066-41702085 | None:intergenic | 40.0% |
TCCCACAACGGTAACTTTAA+TGG | + | chr7_1:41702082-41702101 | None:intergenic | 40.0% | |
TTAAAGTTACCGTTGTGGGA+TGG | - | chr7_1:41702082-41702101 | Msa1019680:intron | 40.0% | |
GCTTGGATCTCTTTCTAGAT+TGG | - | chr7_1:41702234-41702253 | Msa1019680:intron | 40.0% | |
AGATTGGTATGCTTATCGAC+TGG | - | chr7_1:41702250-41702269 | Msa1019680:intron | 40.0% | |
! | GATTGGTATGCTTATCGACT+GGG | - | chr7_1:41702251-41702270 | Msa1019680:intron | 40.0% |
TGCAGGTACAATCATTACCA+AGG | - | chr7_1:41702339-41702358 | Msa1019680:intron | 40.0% | |
ATTGAGAGAAAGTCTCGTAG+AGG | + | chr7_1:41702537-41702556 | None:intergenic | 40.0% | |
GGCAGCAAAATATTGAGGAA+AGG | + | chr7_1:41702859-41702878 | None:intergenic | 40.0% | |
TCGAAGGCAGCAAAATATTG+AGG | + | chr7_1:41702864-41702883 | None:intergenic | 40.0% | |
AAGGCAATCAAGATCTCTTG+CGG | - | chr7_1:41703077-41703096 | Msa1019680:intron | 40.0% | |
GCCCATAAAAGATGTCATGA+TGG | - | chr7_1:41703437-41703456 | Msa1019680:five_prime_UTR | 40.0% | |
TGGTACAATTTCAGAGCTAG+AGG | + | chr7_1:41703589-41703608 | None:intergenic | 40.0% | |
! | CGTGAGATGCACAGTTTTTA+AGG | - | chr7_1:41703630-41703649 | Msa1019680:intron | 40.0% |
AAAATGGCTGATAGCACACA+AGG | + | chr7_1:41703689-41703708 | None:intergenic | 40.0% | |
ATTCTCTTATCGCAGCTAGA+AGG | + | chr7_1:41703734-41703753 | None:intergenic | 40.0% | |
! | TTCTAGCTGCGATAAGAGAA+TGG | - | chr7_1:41703733-41703752 | Msa1019680:intron | 40.0% |
!! | AAATGACAGTAGTGCTGACA+CGG | - | chr7_1:41703916-41703935 | Msa1019680:five_prime_UTR | 40.0% |
ACGTATACTAGTTGTCCCTA+AGG | + | chr7_1:41703943-41703962 | None:intergenic | 40.0% | |
! | AACCACCTTTCAAGTGAAAG+GGG | + | chr7_1:41704020-41704039 | None:intergenic | 40.0% |
! | CAACCACCTTTCAAGTGAAA+GGG | + | chr7_1:41704021-41704040 | None:intergenic | 40.0% |
! | ACAACCACCTTTCAAGTGAA+AGG | + | chr7_1:41704022-41704041 | None:intergenic | 40.0% |
! | CCTCAATTTGCTCGTAACAA+TGG | + | chr7_1:41704046-41704065 | None:intergenic | 40.0% |
CCATTGTTACGAGCAAATTG+AGG | - | chr7_1:41704043-41704062 | Msa1019680:five_prime_UTR | 40.0% | |
! | TAAACAAGGCTTTGGTGAAC+AGG | + | chr7_1:41704154-41704173 | None:intergenic | 40.0% |
GGATGCAAAGCCTCAATAAC+AGG | + | chr7_1:41698058-41698077 | None:intergenic | 45.0% | |
! | TCAACAGTGACATCGGCTAT+AGG | + | chr7_1:41698079-41698098 | None:intergenic | 45.0% |
! | CTGGCTTTCAACAGTGACAT+CGG | + | chr7_1:41698086-41698105 | None:intergenic | 45.0% |
ATACTTCAGTTGCAGCTGGT+GGG | - | chr7_1:41698687-41698706 | Msa1019680:intron | 45.0% | |
CTAACAATCCGTGTGATCTC+TGG | - | chr7_1:41698842-41698861 | Msa1019680:intron | 45.0% | |
AGTCATGCCATGACATACAC+AGG | + | chr7_1:41698902-41698921 | None:intergenic | 45.0% | |
ACTCACCCAATGTACCTCAT+AGG | - | chr7_1:41698919-41698938 | Msa1019680:intron | 45.0% | |
! | CCAGACACAAATGGTGATGT+AGG | + | chr7_1:41698971-41698990 | None:intergenic | 45.0% |
CCTACATCACCATTTGTGTC+TGG | - | chr7_1:41698968-41698987 | Msa1019680:intron | 45.0% | |
CATGTCCCTACTATAGGAAC+AGG | + | chr7_1:41699078-41699097 | None:intergenic | 45.0% | |
CTGTTCCTATAGTAGGGACA+TGG | - | chr7_1:41699076-41699095 | Msa1019680:intron | 45.0% | |
AAGCTCCATGTCCCTACTAT+AGG | + | chr7_1:41699084-41699103 | None:intergenic | 45.0% | |
AATCTGCAGCACCACTTCTT+TGG | + | chr7_1:41699133-41699152 | None:intergenic | 45.0% | |
AGCAGTAGTCTTCCCAATGT+GGG | + | chr7_1:41699236-41699255 | None:intergenic | 45.0% | |
AAGCAGTAGTCTTCCCAATG+TGG | + | chr7_1:41699237-41699256 | None:intergenic | 45.0% | |
TTGTGATTCTCACGAAGTGC+TGG | - | chr7_1:41699448-41699467 | Msa1019680:intron | 45.0% | |
ATACTATTGCAGATGTGGGG+AGG | - | chr7_1:41699683-41699702 | Msa1019680:intron | 45.0% | |
GAACCCCCAAAGCTGTATAA+AGG | - | chr7_1:41699718-41699737 | Msa1019680:intron | 45.0% | |
AAGTTCTCATGGGGCAGTTA+CGG | - | chr7_1:41700121-41700140 | Msa1019680:intron | 45.0% | |
! | GACCTTTATGTTGGTGAGTC+TGG | - | chr7_1:41700168-41700187 | Msa1019680:intron | 45.0% |
TGCCAGACTCACCAACATAA+AGG | + | chr7_1:41700173-41700192 | None:intergenic | 45.0% | |
GCGAAAGAGGTTTCACAGAA+TGG | - | chr7_1:41700211-41700230 | Msa1019680:intron | 45.0% | |
TAAGACCCACTTGGAACACA+TGG | - | chr7_1:41700448-41700467 | Msa1019680:intron | 45.0% | |
AAGACCCACTTGGAACACAT+GGG | - | chr7_1:41700449-41700468 | Msa1019680:intron | 45.0% | |
AGGTTGTCAATAGTAGCACC+AGG | - | chr7_1:41700528-41700547 | Msa1019680:intron | 45.0% | |
AGGATCACTCCGATGTGTTA+CGG | - | chr7_1:41700561-41700580 | Msa1019680:intron | 45.0% | |
AAATATGCCACGTGACCCAA+CGG | + | chr7_1:41700725-41700744 | None:intergenic | 45.0% | |
GGGAATTGGATGTCTTGTCA+AGG | - | chr7_1:41702173-41702192 | Msa1019680:intron | 45.0% | |
! | AGAAAGAGATCCAAGCGTTG+TGG | + | chr7_1:41702230-41702249 | None:intergenic | 45.0% |
! | ATATTTTGCTGCCTTCGAGC+AGG | - | chr7_1:41702866-41702885 | Msa1019680:intron | 45.0% |
TGAAAACTTCACCTGCTCGA+AGG | + | chr7_1:41702880-41702899 | None:intergenic | 45.0% | |
! | GCAGGTGAAGTTTTCACTTG+AGG | - | chr7_1:41702884-41702903 | Msa1019680:intron | 45.0% |
GGAATGTATGATGCTTCTGC+TGG | - | chr7_1:41702939-41702958 | Msa1019680:intron | 45.0% | |
! | GACATCTTTTATGGGCACCA+TGG | + | chr7_1:41703433-41703452 | None:intergenic | 45.0% |
!! | TAGGAAGTACTTGGCTTGGA+AGG | - | chr7_1:41703776-41703795 | Msa1019680:intron | 45.0% |
!! | AGGAAGTACTTGGCTTGGAA+GGG | - | chr7_1:41703777-41703796 | Msa1019680:intron | 45.0% |
! | ACAGGTTGAAGCTAGTTTCC+AGG | - | chr7_1:41703838-41703857 | Msa1019680:intron | 45.0% |
CGTGCAACAAGACATTGATG+CGG | - | chr7_1:41703960-41703979 | Msa1019680:intron | 45.0% | |
TTCCCCTTTCACTTGAAAGG+TGG | - | chr7_1:41704015-41704034 | Msa1019680:intron | 45.0% | |
CGATGTCACTGTTGAAAGCC+AGG | - | chr7_1:41698084-41698103 | Msa1019680:three_prime_UTR | 50.0% | |
GATACTTCAGTTGCAGCTGG+TGG | - | chr7_1:41698686-41698705 | Msa1019680:intron | 50.0% | |
CATGACATACACAGGACCAG+TGG | + | chr7_1:41698894-41698913 | None:intergenic | 50.0% | |
CACTGGTCCTGTGTATGTCA+TGG | - | chr7_1:41698892-41698911 | Msa1019680:intron | 50.0% | |
GTAGGGACATGGAGCTTATG+AGG | - | chr7_1:41699087-41699106 | Msa1019680:intron | 50.0% | |
! | TTGTGCCACTATCCCCACAT+TGG | - | chr7_1:41699220-41699239 | Msa1019680:CDS | 50.0% |
! | TGTGCCACTATCCCCACATT+GGG | - | chr7_1:41699221-41699240 | Msa1019680:CDS | 50.0% |
TCTTCCCAATGTGGGGATAG+TGG | + | chr7_1:41699228-41699247 | None:intergenic | 50.0% | |
GCAGTAGTCTTCCCAATGTG+GGG | + | chr7_1:41699235-41699254 | None:intergenic | 50.0% | |
AGAGGACACTCCTTTGCAGA+TGG | + | chr7_1:41699516-41699535 | None:intergenic | 50.0% | |
! | TTCGCAAGCTCTAGTTGGAG+AGG | + | chr7_1:41699534-41699553 | None:intergenic | 50.0% |
CTCCAACTAGAGCTTGCGAA+TGG | - | chr7_1:41699534-41699553 | Msa1019680:intron | 50.0% | |
! | CTCCATTCGCAAGCTCTAGT+TGG | + | chr7_1:41699539-41699558 | None:intergenic | 50.0% |
TCTGGCACATCCATTCTCCT+AGG | - | chr7_1:41700186-41700205 | Msa1019680:intron | 50.0% | |
CTGGCACATCCATTCTCCTA+GGG | - | chr7_1:41700187-41700206 | Msa1019680:intron | 50.0% | |
TCTTTCGCTCCCTAGGAGAA+TGG | + | chr7_1:41700199-41700218 | None:intergenic | 50.0% | |
ATTCTCCTAGGGAGCGAAAG+AGG | - | chr7_1:41700198-41700217 | Msa1019680:intron | 50.0% | |
TGAAACCTCTTTCGCTCCCT+AGG | + | chr7_1:41700206-41700225 | None:intergenic | 50.0% | |
AGACCCACTTGGAACACATG+GGG | - | chr7_1:41700450-41700469 | Msa1019680:intron | 50.0% | |
CTTCCCCATGTGTTCCAAGT+GGG | + | chr7_1:41700456-41700475 | None:intergenic | 50.0% | |
TCTTCCCCATGTGTTCCAAG+TGG | + | chr7_1:41700457-41700476 | None:intergenic | 50.0% | |
GAACACATGGGGAAGAGTCA+TGG | - | chr7_1:41700461-41700480 | Msa1019680:intron | 50.0% | |
GTCAATAGTAGCACCAGGAC+AGG | - | chr7_1:41700533-41700552 | Msa1019680:intron | 50.0% | |
TAGCACCAGGACAGGATAAC+AGG | - | chr7_1:41700541-41700560 | Msa1019680:intron | 50.0% | |
GTGATCCTGTTATCCTGTCC+TGG | + | chr7_1:41700549-41700568 | None:intergenic | 50.0% | |
! | AACACAGGTTGAGACACCGT+TGG | - | chr7_1:41700706-41700725 | Msa1019680:intron | 50.0% |
! | ACACAGGTTGAGACACCGTT+GGG | - | chr7_1:41700707-41700726 | Msa1019680:intron | 50.0% |
GGTGAACTCCGCAGCTATTT+GGG | - | chr7_1:41701211-41701230 | Msa1019680:intron | 50.0% | |
! | TTGTGGGCTGACTGTGTGTA+GGG | - | chr7_1:41702153-41702172 | Msa1019680:intron | 50.0% |
GCTGACTGTGTGTAGGGAAT+TGG | - | chr7_1:41702159-41702178 | Msa1019680:intron | 50.0% | |
! | CAAGCGTTGTGGCACATGAA+AGG | + | chr7_1:41702219-41702238 | None:intergenic | 50.0% |
CTTTCATGTGCCACAACGCT+TGG | - | chr7_1:41702217-41702236 | Msa1019680:intron | 50.0% | |
GAGAGAAAGTCTCGTAGAGG+TGG | + | chr7_1:41702534-41702553 | None:intergenic | 50.0% | |
GCAATCAAGATCTCTTGCGG+AGG | - | chr7_1:41703080-41703099 | Msa1019680:intron | 50.0% | |
! | AGCTAGTTTCCAGGTAGTCG+AGG | - | chr7_1:41703847-41703866 | Msa1019680:intron | 50.0% |
!! | TAGTGCTGACACGGTCCTTA+GGG | - | chr7_1:41703925-41703944 | Msa1019680:five_prime_UTR | 50.0% |
GCAACAAGACATTGATGCGG+CGG | - | chr7_1:41703963-41703982 | Msa1019680:intron | 50.0% | |
TCTTCCTGGGATGACGAGCA+TGG | - | chr7_1:41698220-41698239 | Msa1019680:three_prime_UTR | 55.0% | |
GGGCAAGCACCAGACACAAA+TGG | + | chr7_1:41698980-41698999 | None:intergenic | 55.0% | |
TTGTGTCTGGTGCTTGCCCT+AGG | - | chr7_1:41698981-41699000 | Msa1019680:CDS | 55.0% | |
!! | TGTGGGGAGGTGTTGTGGTA+TGG | - | chr7_1:41699696-41699715 | Msa1019680:intron | 55.0% |
GGGCAGTTACGGCAACTTCT+TGG | - | chr7_1:41700132-41700151 | Msa1019680:intron | 55.0% | |
CTTGTCGCCACTGTGAAGCT+AGG | - | chr7_1:41700592-41700611 | Msa1019680:intron | 55.0% | |
GCGGGGGAGTTATCTGTGTT+CGG | + | chr7_1:41700871-41700890 | None:intergenic | 55.0% | |
TAGCTTCCCACTTTCCCTCG+AGG | + | chr7_1:41700893-41700912 | None:intergenic | 55.0% | |
GGGTGAACTCCGCAGCTATT+TGG | - | chr7_1:41701210-41701229 | Msa1019680:intron | 55.0% | |
! | CTTGTGGGCTGACTGTGTGT+AGG | - | chr7_1:41702152-41702171 | Msa1019680:intron | 55.0% |
CTCACAAGACCTCGACTACC+TGG | + | chr7_1:41703859-41703878 | None:intergenic | 55.0% | |
!! | GTAGTGCTGACACGGTCCTT+AGG | - | chr7_1:41703924-41703943 | Msa1019680:five_prime_UTR | 55.0% |
CTTCAGTTGCAGCTGGTGGG+AGG | - | chr7_1:41698690-41698709 | Msa1019680:intron | 60.0% | |
!! | GCAGATGTGGGGAGGTGTTG+TGG | - | chr7_1:41699691-41699710 | Msa1019680:intron | 60.0% |
CGCCACTGTGAAGCTAGGTG+CGG | - | chr7_1:41700597-41700616 | Msa1019680:intron | 60.0% | |
GACGTGCGGGTCTCGTATTC+CGG | + | chr7_1:41700644-41700663 | None:intergenic | 60.0% | |
TGAGACACCGTTGGGTCACG+TGG | - | chr7_1:41700715-41700734 | Msa1019680:intron | 60.0% | |
AGATAACTCCCCCGCCTCGA+GGG | - | chr7_1:41700876-41700895 | Msa1019680:intron | 60.0% | |
TTCCCACTTTCCCTCGAGGC+GGG | + | chr7_1:41700889-41700908 | None:intergenic | 60.0% | |
CTTCCCACTTTCCCTCGAGG+CGG | + | chr7_1:41700890-41700909 | None:intergenic | 60.0% | |
GCGGAGTTCACCCCAGAACT+GGG | + | chr7_1:41701203-41701222 | None:intergenic | 60.0% | |
TGCGGAGTTCACCCCAGAAC+TGG | + | chr7_1:41701204-41701223 | None:intergenic | 60.0% | |
GACATTGATGCGGCGGCTCT+TGG | - | chr7_1:41703970-41703989 | Msa1019680:intron | 60.0% | |
GCTGCCATGCTCGTCATCCC+AGG | + | chr7_1:41698227-41698246 | None:intergenic | 65.0% | |
CGCCGCACCTAGCTTCACAG+TGG | + | chr7_1:41700602-41700621 | None:intergenic | 65.0% | |
TGTGAAGCTAGGTGCGGCGC+TGG | - | chr7_1:41700603-41700622 | Msa1019680:intron | 65.0% | |
CAGATAACTCCCCCGCCTCG+AGG | - | chr7_1:41700875-41700894 | Msa1019680:intron | 65.0% | |
TCCCACTTTCCCTCGAGGCG+GGG | + | chr7_1:41700888-41700907 | None:intergenic | 65.0% | |
TCCCCCGCCTCGAGGGAAAG+TGG | - | chr7_1:41700883-41700902 | Msa1019680:intron | 70.0% | |
CCCACTTTCCCTCGAGGCGG+GGG | + | chr7_1:41700887-41700906 | None:intergenic | 70.0% | |
CCCCCGCCTCGAGGGAAAGT+GGG | - | chr7_1:41700884-41700903 | Msa1019680:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_1 | gene | 41697954 | 41704190 | 41697954 | ID=Msa1019680;Name=Msa1019680 |
chr7_1 | mRNA | 41697954 | 41704190 | 41697954 | ID=Msa1019680-mRNA-1;Parent=Msa1019680;Name=Msa1019680-mRNA-1;_AED=0.18;_eAED=0.18;_QI=401|1|1|1|0.90|0.83|12|347|215 |
chr7_1 | exon | 41697954 | 41697981 | 41697954 | ID=Msa1019680-mRNA-1:exon:8142;Parent=Msa1019680-mRNA-1 |
chr7_1 | exon | 41698004 | 41698442 | 41698004 | ID=Msa1019680-mRNA-1:exon:8141;Parent=Msa1019680-mRNA-1 |
chr7_1 | exon | 41698971 | 41699074 | 41698971 | ID=Msa1019680-mRNA-1:exon:8140;Parent=Msa1019680-mRNA-1 |
chr7_1 | exon | 41699184 | 41699256 | 41699184 | ID=Msa1019680-mRNA-1:exon:8139;Parent=Msa1019680-mRNA-1 |
chr7_1 | exon | 41699753 | 41699800 | 41699753 | ID=Msa1019680-mRNA-1:exon:8138;Parent=Msa1019680-mRNA-1 |
chr7_1 | exon | 41699889 | 41699970 | 41699889 | ID=Msa1019680-mRNA-1:exon:8137;Parent=Msa1019680-mRNA-1 |
chr7_1 | exon | 41701912 | 41702042 | 41701912 | ID=Msa1019680-mRNA-1:exon:8136;Parent=Msa1019680-mRNA-1 |
chr7_1 | exon | 41702360 | 41702449 | 41702360 | ID=Msa1019680-mRNA-1:exon:8135;Parent=Msa1019680-mRNA-1 |
chr7_1 | exon | 41702554 | 41702638 | 41702554 | ID=Msa1019680-mRNA-1:exon:8134;Parent=Msa1019680-mRNA-1 |
chr7_1 | exon | 41703409 | 41703482 | 41703409 | ID=Msa1019680-mRNA-1:exon:8133;Parent=Msa1019680-mRNA-1 |
chr7_1 | exon | 41703865 | 41703954 | 41703865 | ID=Msa1019680-mRNA-1:exon:8132;Parent=Msa1019680-mRNA-1 |
chr7_1 | exon | 41704039 | 41704190 | 41704039 | ID=Msa1019680-mRNA-1:exon:8131;Parent=Msa1019680-mRNA-1 |
chr7_1 | five_prime_UTR | 41704039 | 41704190 | 41704039 | ID=Msa1019680-mRNA-1:five_prime_utr;Parent=Msa1019680-mRNA-1 |
chr7_1 | five_prime_UTR | 41703865 | 41703954 | 41703865 | ID=Msa1019680-mRNA-1:five_prime_utr;Parent=Msa1019680-mRNA-1 |
chr7_1 | five_prime_UTR | 41703409 | 41703482 | 41703409 | ID=Msa1019680-mRNA-1:five_prime_utr;Parent=Msa1019680-mRNA-1 |
chr7_1 | five_prime_UTR | 41702554 | 41702638 | 41702554 | ID=Msa1019680-mRNA-1:five_prime_utr;Parent=Msa1019680-mRNA-1 |
chr7_1 | CDS | 41702360 | 41702449 | 41702360 | ID=Msa1019680-mRNA-1:cds;Parent=Msa1019680-mRNA-1 |
chr7_1 | CDS | 41701912 | 41702042 | 41701912 | ID=Msa1019680-mRNA-1:cds;Parent=Msa1019680-mRNA-1 |
chr7_1 | CDS | 41699889 | 41699970 | 41699889 | ID=Msa1019680-mRNA-1:cds;Parent=Msa1019680-mRNA-1 |
chr7_1 | CDS | 41699753 | 41699800 | 41699753 | ID=Msa1019680-mRNA-1:cds;Parent=Msa1019680-mRNA-1 |
chr7_1 | CDS | 41699184 | 41699256 | 41699184 | ID=Msa1019680-mRNA-1:cds;Parent=Msa1019680-mRNA-1 |
chr7_1 | CDS | 41698971 | 41699074 | 41698971 | ID=Msa1019680-mRNA-1:cds;Parent=Msa1019680-mRNA-1 |
chr7_1 | CDS | 41698323 | 41698442 | 41698323 | ID=Msa1019680-mRNA-1:cds;Parent=Msa1019680-mRNA-1 |
chr7_1 | three_prime_UTR | 41698004 | 41698322 | 41698004 | ID=Msa1019680-mRNA-1:three_prime_utr;Parent=Msa1019680-mRNA-1 |
chr7_1 | three_prime_UTR | 41697954 | 41697981 | 41697954 | ID=Msa1019680-mRNA-1:three_prime_utr;Parent=Msa1019680-mRNA-1 |
Gene Sequence |
Protein sequence |