AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1019800

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1019800 MtrunA17_Chr7g0236121 90.315 444 41 1 1 442 1 444 0.0 838
Msa1019800 MtrunA17_Chr7g0236201 94.118 425 19 1 1 425 1 419 0.0 834
Msa1019800 MtrunA17_Chr7g0236161 94.118 425 19 1 1 425 1 419 0.0 833
Msa1019800 MtrunA17_Chr7g0236651 59.165 431 167 6 11 438 7 431 4.21e-177 519
Msa1019800 MtrunA17_Chr7g0236641 57.576 429 174 6 11 436 9 432 9.09e-176 517
Msa1019800 MtrunA17_Chr4g0055021 58.911 404 158 6 11 412 9 406 1.15e-172 494
Msa1019800 MtrunA17_Chr7g0236511 58.161 435 171 7 1 432 7 433 3.45e-172 506
Msa1019800 MtrunA17_Chr7g0236551 57.075 424 168 6 10 430 8 420 4.89e-165 488
Msa1019800 MtrunA17_Chr7g0236691 58.118 425 169 6 11 432 9 427 3.99e-161 479
Msa1019800 MtrunA17_Chr7g0236561 57.213 409 166 6 27 432 5 407 5.31e-161 479
Msa1019800 MtrunA17_Chr7g0236521 58.015 393 156 6 42 431 20 406 8.93e-157 454
Msa1019800 MtrunA17_Chr7g0236341 56.161 422 169 8 22 439 20 429 1.92e-155 464
Msa1019800 MtrunA17_Chr7g0236231 52.278 417 179 9 1 412 11 412 1.49e-140 426
Msa1019800 MtrunA17_Chr2g0280841 46.437 435 215 9 8 431 9 436 7.46e-134 396
Msa1019800 MtrunA17_Chr2g0280791 48.456 421 196 9 1 412 1 409 1.45e-130 400
Msa1019800 MtrunA17_Chr2g0280801 45.475 453 209 10 8 437 9 446 7.60e-122 378
Msa1019800 MtrunA17_Chr2g0280781 44.977 438 218 10 9 434 5 431 1.24e-115 361
Msa1019800 MtrunA17_Chr2g0280771 46.860 414 199 8 11 412 4 408 7.66e-115 354
Msa1019800 MtrunA17_Chr8g0340061 42.217 424 235 6 11 431 11 427 4.97e-104 322
Msa1019800 MtrunA17_Chr8g0340071 41.727 417 232 7 11 423 11 420 7.43e-102 325
Msa1019800 MtrunA17_Chr8g0340081 41.827 416 232 6 11 423 13 421 5.67e-101 323
Msa1019800 MtrunA17_Chr7g0236471 54.110 292 122 7 160 444 1 287 5.29e-99 313
Msa1019800 MtrunA17_Chr7g0236571 54.093 281 121 5 160 437 9 284 2.45e-96 306
Msa1019800 MtrunA17_Chr8g0340111 43.000 400 215 8 30 423 31 423 5.96e-95 307
Msa1019800 MtrunA17_Chr7g0236591 56.790 243 101 3 10 249 35 276 2.13e-87 271
Msa1019800 MtrunA17_Chr8g0340091 39.329 417 216 10 12 423 63 447 2.45e-84 279
Msa1019800 MtrunA17_Chr4g0048581 37.532 389 232 6 28 412 31 412 7.07e-83 275
Msa1019800 MtrunA17_Chr2g0318831 33.621 464 281 10 9 459 6 455 1.72e-75 254
Msa1019800 MtrunA17_Chr2g0280681 35.650 446 251 13 7 434 3 430 4.75e-75 254
Msa1019800 MtrunA17_Chr4g0023071 35.211 426 253 14 7 419 4 419 7.22e-75 253
Msa1019800 MtrunA17_Chr4g0048741 35.011 457 253 13 3 433 13 451 1.16e-74 253
Msa1019800 MtrunA17_Chr3g0084621 32.667 450 273 10 1 436 1 434 5.75e-74 246
Msa1019800 MtrunA17_Chr3g0084451 32.886 447 273 9 1 436 1 431 1.23e-73 250
Msa1019800 MtrunA17_Chr3g0084491 34.240 441 258 12 13 436 21 446 1.98e-73 249
Msa1019800 MtrunA17_Chr4g0048761 34.267 464 249 14 3 434 13 452 1.40e-72 243
Msa1019800 MtrunA17_Chr2g0280691 34.014 441 251 14 11 434 11 428 1.57e-72 247
Msa1019800 MtrunA17_Chr3g0084681 33.624 458 268 15 3 444 1 438 4.83e-72 244
Msa1019800 MtrunA17_Chr4g0048691 32.787 427 252 11 26 431 43 455 5.47e-72 238
Msa1019800 MtrunA17_Chr2g0323301 36.409 401 231 14 31 419 29 417 6.26e-72 245
Msa1019800 MtrunA17_Chr2g0318811 33.257 436 265 10 10 434 4 424 4.67e-71 243
Msa1019800 MtrunA17_Chr4g0048721 33.408 449 261 14 7 433 10 442 5.55e-71 235
Msa1019800 MtrunA17_Chr8g0361261 35.024 414 244 10 10 412 37 436 6.45e-71 243
Msa1019800 MtrunA17_Chr3g0084411 33.258 442 266 11 8 436 5 430 1.23e-70 241
Msa1019800 MtrunA17_Chr2g0318841 33.894 416 247 12 13 416 7 406 1.25e-70 241
Msa1019800 MtrunA17_Chr2g0280751 36.842 399 216 14 31 415 35 411 1.97e-70 241
Msa1019800 MtrunA17_Chr3g0084441 34.043 423 246 11 31 436 31 437 5.10e-70 240
Msa1019800 MtrunA17_Chr8g0361301 34.300 414 247 10 10 412 6 405 3.04e-69 238
Msa1019800 MtrunA17_Chr3g0098791 32.965 452 266 12 3 436 1 433 5.78e-69 233
Msa1019800 MtrunA17_Chr3g0084691 33.409 443 265 11 3 431 1 427 6.24e-69 237
Msa1019800 MtrunA17_Chr4g0020081 34.783 414 227 15 15 412 13 399 9.51e-69 236
Msa1019800 MtrunA17_Chr4g0042351 33.494 415 244 8 10 412 6 400 9.84e-69 236
Msa1019800 MtrunA17_Chr4g0042441 34.419 430 246 12 11 425 6 414 1.22e-68 236
Msa1019800 MtrunA17_Chr3g0084651 33.485 439 256 12 13 431 7 429 4.38e-68 226
Msa1019800 MtrunA17_Chr3g0078551 33.800 429 245 11 9 413 7 420 1.69e-67 233
Msa1019800 MtrunA17_Chr2g0280731 34.261 467 263 18 1 448 1 442 2.37e-67 233
Msa1019800 MtrunA17_Chr8g0361311 34.048 420 243 13 7 412 6 405 2.94e-67 224
Msa1019800 MtrunA17_Chr8g0361441 33.787 441 256 13 10 434 8 428 3.96e-67 232
Msa1019800 MtrunA17_Chr4g0048651 33.560 441 254 14 13 431 32 455 1.18e-66 224
Msa1019800 MtrunA17_Chr3g0078521 33.114 456 262 13 3 434 1 437 2.49e-66 230
Msa1019800 MtrunA17_Chr2g0280701 35.294 442 239 15 11 432 4 418 4.34e-66 229
Msa1019800 MtrunA17_Chr4g0042391 32.265 437 260 10 10 431 6 421 8.68e-66 228
Msa1019800 MtrunA17_Chr8g0361431 35.523 411 219 10 11 412 20 393 2.57e-65 227
Msa1019800 MtrunA17_Chr5g0422921 35.629 421 234 12 11 412 1 403 4.14e-65 226
Msa1019800 MtrunA17_Chr4g0042421 32.458 419 253 14 9 412 5 408 1.31e-64 223
Msa1019800 MtrunA17_Chr4g0042361 33.500 400 242 10 27 412 57 446 1.85e-64 225
Msa1019800 MtrunA17_Chr4g0048631 32.710 428 253 12 3 412 1 411 2.00e-64 225
Msa1019800 MtrunA17_Chr3g0084431 32.842 475 264 15 3 458 1 439 2.35e-64 224
Msa1019800 MtrunA17_Chr4g0042401 32.045 440 271 12 9 433 5 431 7.82e-64 223
Msa1019800 MtrunA17_Chr8g0361251 34.186 430 229 14 7 412 6 405 8.14e-64 223
Msa1019800 MtrunA17_Chr3g0093161 36.077 413 235 11 12 412 7 402 1.02e-63 223
Msa1019800 MtrunA17_Chr5g0428101 33.898 413 250 8 11 412 10 410 2.74e-63 221
Msa1019800 MtrunA17_Chr2g0280711 32.779 421 250 13 32 434 30 435 5.97e-63 221
Msa1019800 MtrunA17_Chr3g0084421 33.586 396 233 11 55 436 14 393 1.83e-62 219
Msa1019800 MtrunA17_Chr4g0048641 33.333 423 221 11 38 442 57 436 5.86e-62 217
Msa1019800 MtrunA17_Chr4g0048801 33.661 407 229 14 28 411 20 408 3.09e-61 216
Msa1019800 MtrunA17_Chr3g0078531 31.696 448 267 12 9 434 18 448 3.49e-61 216
Msa1019800 MtrunA17_Chr4g0042341 33.333 432 242 15 8 412 2 414 1.10e-60 214
Msa1019800 MtrunA17_Chr3g0078541 32.794 433 245 13 28 434 36 448 1.71e-60 214
Msa1019800 MtrunA17_Chr4g0048791 31.702 429 261 10 26 435 37 452 2.78e-60 213
Msa1019800 MtrunA17_Chr4g0042381 33.420 386 224 9 40 412 35 400 8.37e-60 211
Msa1019800 MtrunA17_Chr8g0361281 34.426 427 242 15 11 417 7 415 3.20e-59 210
Msa1019800 MtrunA17_Chr5g0428111 33.000 400 242 8 25 412 26 411 4.47e-58 207
Msa1019800 MtrunA17_Chr2g0323341 37.319 276 160 9 148 419 62 328 2.69e-51 186
Msa1019800 MtrunA17_Chr4g0023221 30.667 450 243 15 8 420 24 441 2.68e-50 186
Msa1019800 MtrunA17_Chr2g0278161 64.706 136 38 4 414 544 37 167 1.44e-47 163
Msa1019800 MtrunA17_Chr7g0274221 70.000 120 22 4 288 396 1 117 2.34e-44 154
Msa1019800 MtrunA17_Chr2g0278121 61.029 136 47 2 414 543 288 423 6.09e-44 161
Msa1019800 MtrunA17_Chr2g0323241 32.414 435 231 25 7 411 2 403 3.36e-42 157
Msa1019800 MtrunA17_Chr8g0361151 28.169 426 255 14 11 425 15 400 4.27e-41 153
Msa1019800 MtrunA17_Chr4g0055001 54.015 137 56 4 299 433 15 146 2.00e-39 140
Msa1019800 MtrunA17_Chr8g0361141 29.854 412 243 15 9 407 7 385 1.60e-37 147
Msa1019800 MtrunA17_Chr3g0087391 61.481 135 42 4 414 543 269 398 1.47e-36 140
Msa1019800 MtrunA17_Chr8g0348661 28.365 416 248 16 31 430 14 395 2.78e-35 141
Msa1019800 MtrunA17_Chr7g0251931 52.555 137 55 2 414 540 61 197 2.62e-34 128
Msa1019800 MtrunA17_Chr8g0360201 30.667 300 168 7 114 407 8 273 3.25e-33 134
Msa1019800 MtrunA17_Chr1g0207991 51.145 131 54 2 419 539 140 270 1.02e-31 123
Msa1019800 MtrunA17_Chr2g0278221 50.000 146 65 2 402 539 5 150 4.30e-31 118
Msa1019800 MtrunA17_Chr7g0236661 68.675 83 25 1 25 107 1 82 1.13e-30 114
Msa1019800 MtrunA17_Chr4g0023111 29.694 458 203 27 4 398 3 404 1.70e-28 120
Msa1019800 MtrunA17_Chr1g0162031 29.365 252 135 6 160 402 1 218 3.20e-28 113
Msa1019800 MtrunA17_Chr7g0236411 55.172 87 39 0 191 277 25 111 1.97e-27 106
Msa1019800 MtrunA17_Chr7g0227241 46.715 137 60 3 420 543 133 269 6.38e-27 110
Msa1019800 MtrunA17_Chr3g0137721 42.763 152 56 4 416 541 253 399 1.46e-26 112
Msa1019800 MtrunA17_Chr2g0277281 46.617 133 58 3 418 537 265 397 2.63e-26 110
Msa1019800 MtrunA17_Chr6g0453571 31.801 261 150 9 160 412 4 244 9.63e-26 109
Msa1019800 MtrunA17_Chr3g0137701 44.961 129 63 3 418 539 263 390 2.27e-25 108
Msa1019800 MtrunA17_Chr7g0246351 45.038 131 57 3 419 539 268 393 6.45e-25 107
Msa1019800 MtrunA17_Chr6g0453581 37.423 163 90 6 9 160 1 162 2.11e-24 100
Msa1019800 MtrunA17_Chr6g0461431 48.031 127 60 4 422 543 74 199 2.31e-24 101
Msa1019800 MtrunA17_Chr2g0278791 43.200 125 68 2 416 537 244 368 3.68e-24 104
Msa1019800 MtrunA17_Chr3g0086131 44.361 133 61 3 417 537 23 154 1.13e-23 98.2
Msa1019800 MtrunA17_Chr3g0132631 44.056 143 59 5 414 537 230 370 1.97e-23 102
Msa1019800 MtrunA17_Chr3g0106131 24.260 507 311 19 8 496 6 457 3.06e-23 104
Msa1019800 MtrunA17_Chr7g0227651 38.514 148 80 3 404 540 236 383 3.56e-23 101
Msa1019800 MtrunA17_Chr2g0278091 42.754 138 60 4 419 537 234 371 7.25e-23 100
Msa1019800 MtrunA17_Chr7g0227851 43.443 122 62 2 423 537 257 378 8.34e-23 100
Msa1019800 MtrunA17_Chr5g0438051 42.105 133 65 2 419 539 269 401 1.35e-22 100
Msa1019800 MtrunA17_Chr7g0227781 43.077 130 60 4 420 537 20 147 1.89e-22 94.0
Msa1019800 MtrunA17_Chr7g0227831 43.243 111 56 4 432 537 10 118 1.26e-21 90.5
Msa1019800 MtrunA17_Chr3g0106211 23.741 417 247 17 11 398 9 383 2.14e-21 98.6
Msa1019800 MtrunA17_Chr7g0235841 41.353 133 64 3 420 539 22 153 2.87e-21 90.9
Msa1019800 MtrunA17_Chr7g0215331 44.444 135 63 4 417 541 196 328 5.93e-21 94.4
Msa1019800 MtrunA17_Chr4g0053161 24.062 453 288 18 9 440 29 446 6.15e-21 97.1
Msa1019800 MtrunA17_Chr7g0227631 38.519 135 72 3 417 540 175 309 1.29e-20 92.8
Msa1019800 MtrunA17_Chr3g0137681 41.860 129 67 3 418 539 255 382 7.15e-20 91.7
Msa1019800 MtrunA17_Chr7g0227641 38.235 136 73 3 417 541 231 366 7.30e-20 91.7
Msa1019800 MtrunA17_Chr7g0226471 38.519 135 67 5 419 537 10 144 7.85e-20 86.3
Msa1019800 MtrunA17_Chr3g0106141 25.654 382 228 18 40 398 31 379 3.28e-19 91.7
Msa1019800 MtrunA17_Chr4g0023261 58.904 73 30 0 467 539 97 169 1.18e-18 83.6
Msa1019800 MtrunA17_Chr0c04g0492001 24.533 375 245 13 39 398 36 387 1.28e-18 89.7
Msa1019800 MtrunA17_Chr3g0137671 40.000 130 69 3 422 543 73 201 1.64e-18 84.3
Msa1019800 MtrunA17_Chr4g0048681 27.642 246 123 9 202 435 1 203 1.66e-18 89.0
Msa1019800 MtrunA17_Chr3g0124051 38.971 136 66 3 422 540 161 296 1.92e-18 86.3
Msa1019800 MtrunA17_Chr3g0106121 24.510 408 257 15 8 398 6 379 2.39e-18 89.0
Msa1019800 MtrunA17_Chr1g0202331 24.937 397 231 21 46 398 42 415 2.46e-18 89.0
Msa1019800 MtrunA17_Chr5g0394381 25.743 404 259 18 9 400 5 379 3.06e-18 88.6
Msa1019800 MtrunA17_Chr3g0106151 24.074 378 229 17 40 398 34 372 3.07e-18 88.6
Msa1019800 MtrunA17_Chr0c04g0492031 24.194 372 250 12 39 398 36 387 4.09e-18 88.2
Msa1019800 MtrunA17_Chr7g0236211 34.815 135 75 3 417 538 253 387 5.45e-18 86.3
Msa1019800 MtrunA17_Chr3g0134291 24.129 373 249 14 39 398 36 387 7.42e-18 87.4
Msa1019800 MtrunA17_Chr7g0227841 37.500 128 65 4 420 532 45 172 8.40e-18 81.3
Msa1019800 MtrunA17_Chr1g0181601 39.231 130 65 4 420 537 257 384 1.52e-17 84.7
Msa1019800 MtrunA17_Chr3g0093361 36.806 144 76 5 405 538 263 401 2.08e-17 84.3
Msa1019800 MtrunA17_Chr7g0226481 36.567 134 70 5 419 537 214 347 2.43e-17 83.6
Msa1019800 MtrunA17_Chr5g0416501 34.109 129 72 3 417 538 93 215 2.91e-17 80.9
Msa1019800 MtrunA17_Chr4g0063691 23.575 386 235 17 46 398 54 412 3.90e-17 85.1
Msa1019800 MtrunA17_Chr7g0236601 62.963 54 20 0 257 310 1 54 4.41e-17 75.5
Msa1019800 MtrunA17_Chr7g0255101 35.616 146 75 6 411 538 335 479 4.99e-17 84.0
Msa1019800 MtrunA17_Chr3g0091171 37.984 129 69 5 420 537 235 363 5.86e-17 82.8
Msa1019800 MtrunA17_Chr1g0167231 34.815 135 72 4 422 540 1 135 8.38e-17 77.4
Msa1019800 MtrunA17_Chr5g0423901 37.692 130 67 4 420 537 254 381 1.06e-16 82.0
Msa1019800 MtrunA17_Chr5g0406891 38.211 123 67 3 419 532 56 178 1.20e-16 79.0
Msa1019800 MtrunA17_Chr3g0114151 36.842 133 70 3 422 540 277 409 1.30e-16 82.0
Msa1019800 MtrunA17_Chr5g0395311 36.029 136 75 3 420 543 276 411 1.59e-16 82.0
Msa1019800 MtrunA17_Chr7g0236611 50.667 75 33 2 364 436 1 73 1.83e-16 77.4
Msa1019800 MtrunA17_Chr2g0297931 37.681 138 67 4 421 540 264 400 1.89e-16 81.6
Msa1019800 MtrunA17_Chr5g0419701 36.842 133 72 2 420 540 257 389 2.25e-16 81.3
Msa1019800 MtrunA17_Chr7g0237351 23.831 449 290 19 10 437 7 424 3.24e-16 82.0
Msa1019800 MtrunA17_Chr7g0257821 22.738 409 261 16 10 403 10 378 3.37e-16 82.0
Msa1019800 MtrunA17_Chr6g0471031 37.313 134 70 4 421 540 313 446 5.35e-16 80.5
Msa1019800 MtrunA17_Chr7g0237391 24.879 414 269 16 42 440 40 426 6.01e-16 81.3
Msa1019800 MtrunA17_Chr8g0357691 30.319 188 126 4 30 213 37 223 7.65e-16 80.9
Msa1019800 MtrunA17_Chr1g0208801 36.806 144 71 6 413 539 245 385 9.06e-16 79.3
Msa1019800 MtrunA17_Chr5g0419431 35.878 131 73 3 422 541 262 392 1.13e-15 79.3
Msa1019800 MtrunA17_Chr3g0106221 23.747 459 290 22 11 441 8 434 1.15e-15 80.5
Msa1019800 MtrunA17_Chr3g0138571 34.783 138 75 3 418 540 250 387 2.70e-15 77.8
Msa1019800 MtrunA17_Chr6g0467281 24.713 348 212 14 88 421 82 393 3.46e-15 79.0
Msa1019800 MtrunA17_Chr5g0396401 35.385 130 71 3 421 537 245 374 5.43e-15 77.0
Msa1019800 MtrunA17_Chr4g0054751 60.000 60 24 0 467 526 13 72 7.63e-15 69.7
Msa1019800 MtrunA17_Chr8g0357931 26.991 226 160 3 25 246 27 251 8.55e-15 77.4
Msa1019800 MtrunA17_Chr1g0166251 33.088 136 73 4 417 535 247 381 1.08e-14 75.9
Msa1019800 MtrunA17_Chr6g0465731 35.338 133 66 4 421 537 250 378 1.22e-14 75.9
Msa1019800 MtrunA17_Chr5g0422791 38.614 101 55 2 419 512 77 177 1.22e-14 72.8
Msa1019800 MtrunA17_Chr6g0458601 34.109 129 74 2 420 537 308 436 1.53e-14 75.9
Msa1019800 MtrunA17_Chr6g0458611 32.558 129 76 2 420 537 182 310 1.88e-14 74.7
Msa1019800 MtrunA17_Chr8g0358031 29.524 210 139 6 43 246 46 252 2.52e-14 76.3
Msa1019800 MtrunA17_Chr7g0237331 23.810 378 241 15 38 398 37 384 3.26e-14 75.9
Msa1019800 MtrunA17_Chr1g0191111 29.570 186 107 6 75 246 84 259 3.56e-14 72.8
Msa1019800 MtrunA17_Chr5g0399361 43.878 98 48 2 424 514 103 200 3.95e-14 72.0
Msa1019800 MtrunA17_Chr6g0465671 35.385 130 70 4 421 537 248 376 4.00e-14 74.3
Msa1019800 MtrunA17_Chr5g0431711 33.835 133 72 4 420 538 248 378 4.84e-14 73.9
Msa1019800 MtrunA17_Chr3g0129731 36.585 123 64 4 420 530 70 190 5.19e-14 71.2
Msa1019800 MtrunA17_Chr7g0262091 34.586 133 73 4 420 538 257 389 5.63e-14 73.9
Msa1019800 MtrunA17_Chr3g0107721 31.902 163 68 5 419 538 256 418 7.07e-14 73.9
Msa1019800 MtrunA17_Chr7g0250281 32.558 129 71 4 419 531 9 137 7.45e-14 68.9
Msa1019800 MtrunA17_Chr7g0236401 51.613 62 26 2 342 403 2 59 7.68e-14 66.2
Msa1019800 MtrunA17_Chr3g0138371 33.333 135 74 3 422 540 255 389 8.48e-14 73.2
Msa1019800 MtrunA17_Chr7g0224001 31.538 130 79 3 419 538 264 393 8.55e-14 73.6
Msa1019800 MtrunA17_Chr6g0466481 34.351 131 72 4 420 537 247 376 9.67e-14 73.2
Msa1019800 MtrunA17_Chr8g0357801 25.110 227 162 5 25 246 28 251 9.76e-14 73.9
Msa1019800 MtrunA17_Chr8g0357631 30.319 188 126 4 29 213 36 221 1.31e-13 73.9
Msa1019800 MtrunA17_Chr3g0139601 37.681 138 67 7 422 540 340 477 1.39e-13 73.2
Msa1019800 MtrunA17_Chr8g0357651 32.000 175 114 5 43 213 50 223 1.39e-13 73.9
Msa1019800 MtrunA17_Chr7g0246331 35.417 144 70 5 419 539 281 424 1.51e-13 72.8
Msa1019800 MtrunA17_Chr1g0208781 37.984 129 62 6 421 537 33 155 1.71e-13 68.6
Msa1019800 MtrunA17_Chr7g0262081 36.090 133 71 5 420 538 267 399 2.83e-13 71.6
Msa1019800 MtrunA17_Chr3g0138391 37.624 101 52 2 422 511 11 111 2.99e-13 70.1
Msa1019800 MtrunA17_Chr6g0467301 25.714 315 181 15 88 388 87 362 3.60e-13 72.4
Msa1019800 MtrunA17_Chr8g0358071 27.957 186 127 5 44 224 46 229 3.66e-13 72.4
Msa1019800 MtrunA17_Chr5g0399841 30.435 161 96 6 387 538 28 181 4.40e-13 67.8
Msa1019800 MtrunA17_Chr2g0278151 66.038 53 16 1 414 464 223 275 7.26e-13 69.3
Msa1019800 MtrunA17_Chr5g0423851 33.129 163 82 6 395 537 217 372 7.68e-13 70.1
Msa1019800 MtrunA17_Chr8g0338511 22.762 391 244 16 44 404 50 412 9.20e-13 70.5
Msa1019800 MtrunA17_Chr7g0235431 36.232 138 69 4 422 540 237 374 1.17e-12 69.7
Msa1019800 MtrunA17_Chr7g0262121 35.606 132 71 5 421 538 260 391 1.19e-12 69.7
Msa1019800 MtrunA17_Chr5g0426151 31.944 144 79 4 415 539 171 314 1.36e-12 68.9
Msa1019800 MtrunA17_Chr4g0048671 45.714 70 36 1 26 93 21 90 1.37e-12 63.9
Msa1019800 MtrunA17_Chr2g0318941 35.922 103 50 4 313 410 1 92 1.40e-12 67.8
Msa1019800 MtrunA17_Chr7g0236111 32.174 115 67 3 435 538 13 127 1.55e-12 64.7
Msa1019800 MtrunA17_Chr4g0041551 34.161 161 70 8 405 541 210 358 1.85e-12 68.9
Msa1019800 MtrunA17_Chr8g0362021 35.461 141 67 5 416 537 315 450 1.94e-12 69.3
Msa1019800 MtrunA17_Chr2g0277901 47.945 73 35 1 468 537 178 250 2.15e-12 67.4
Msa1019800 MtrunA17_Chr3g0080781 30.921 152 78 5 405 538 41 183 2.46e-12 65.9
Msa1019800 MtrunA17_Chr3g0080241 33.835 133 72 4 420 538 11 141 2.82e-12 64.7
Msa1019800 MtrunA17_Chr3g0106191 25.301 332 193 15 81 398 3 293 4.66e-12 68.9
Msa1019800 MtrunA17_Chr8g0358151 27.568 185 112 6 75 246 72 247 9.17e-12 67.0
Msa1019800 MtrunA17_Chr8g0357681 31.285 179 110 6 43 213 52 225 1.07e-11 67.0
Msa1019800 MtrunA17_Chr4g0019511 32.576 132 75 2 420 537 184 315 1.49e-11 65.9
Msa1019800 MtrunA17_Chr8g0357881 25.359 209 148 5 44 246 52 258 1.54e-11 67.4
Msa1019800 MtrunA17_Chr8g0357761 31.285 179 110 6 43 213 53 226 2.37e-11 66.6
Msa1019800 MtrunA17_Chr7g0234561 23.944 355 223 12 98 437 42 364 2.69e-11 66.2
Msa1019800 MtrunA17_Chr1g0193401 31.783 129 77 2 420 537 427 555 2.73e-11 66.2
Msa1019800 MtrunA17_Chr8g0357711 28.571 217 138 8 9 213 12 223 3.40e-11 66.2
Msa1019800 MtrunA17_Chr3g0114141 33.333 135 73 4 422 540 86 219 3.64e-11 63.2
Msa1019800 MtrunA17_Chr3g0138561 39.241 79 43 1 467 540 92 170 4.51e-11 62.4
Msa1019800 MtrunA17_Chr6g0458501 35.294 136 71 4 420 540 275 408 7.68e-11 64.3
Msa1019800 MtrunA17_Chr2g0315841 23.944 355 205 16 74 401 90 406 7.84e-11 64.3
Msa1019800 MtrunA17_Chr3g0120901 29.577 142 75 5 405 528 156 290 8.46e-11 63.2
Msa1019800 MtrunA17_Chr5g0416511 34.021 97 59 1 417 508 185 281 8.77e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1019800 AT1G11330.3 41.176 425 231 14 30 441 31 449 3.53e-98 314
Msa1019800 AT1G11330.1 41.176 425 231 14 30 441 31 449 1.90e-97 314
Msa1019800 AT1G11330.2 41.176 425 231 14 30 441 31 449 2.15e-97 314
Msa1019800 AT1G11350.1 42.822 404 211 13 19 412 13 406 1.88e-96 311
Msa1019800 AT1G11300.2 40.732 437 234 13 14 439 13 435 1.03e-95 309
Msa1019800 AT1G11300.1 40.559 429 232 12 14 431 13 429 1.28e-95 309
Msa1019800 AT1G11303.1 40.686 408 221 12 14 412 13 408 1.57e-91 298
Msa1019800 AT4G21390.2 39.573 422 225 13 6 412 4 410 4.62e-84 277
Msa1019800 AT4G21390.1 39.573 422 225 13 6 412 4 410 1.24e-83 278
Msa1019800 AT1G61440.1 36.842 399 233 10 22 415 9 393 1.63e-81 271
Msa1019800 AT1G61440.3 36.842 399 233 10 22 415 9 393 1.88e-81 271
Msa1019800 AT1G61610.2 36.277 419 244 10 8 412 5 414 2.01e-81 270
Msa1019800 AT1G61440.2 36.842 399 233 10 22 415 9 393 2.26e-81 271
Msa1019800 AT1G61610.1 36.277 419 244 10 8 412 5 414 6.57e-81 270
Msa1019800 AT1G61420.1 38.462 377 217 8 42 415 36 400 2.05e-79 265
Msa1019800 AT1G61420.2 38.462 377 217 8 42 415 36 400 2.37e-79 265
Msa1019800 AT1G61420.4 38.462 377 217 8 42 415 36 400 2.37e-79 265
Msa1019800 AT1G61430.2 36.725 403 239 8 13 412 7 396 3.65e-79 259
Msa1019800 AT1G61430.6 36.725 403 239 8 13 412 7 396 3.65e-79 259
Msa1019800 AT1G61380.1 36.919 409 244 9 8 412 2 400 9.40e-79 264
Msa1019800 AT1G61400.1 36.983 411 240 10 7 412 11 407 1.12e-78 264
Msa1019800 AT1G61400.2 36.983 411 240 10 7 412 11 407 1.52e-78 263
Msa1019800 AT1G61430.5 36.725 403 239 8 13 412 7 396 3.85e-78 260
Msa1019800 AT1G61430.8 36.725 403 239 8 13 412 7 396 4.12e-78 260
Msa1019800 AT1G61430.7 36.725 403 239 8 13 412 7 396 4.12e-78 260
Msa1019800 AT1G61430.4 38.235 374 215 8 42 412 13 373 4.43e-78 256
Msa1019800 AT1G61390.1 36.253 411 248 9 7 412 20 421 5.43e-78 262
Msa1019800 AT1G61480.1 36.232 414 243 10 7 415 3 400 8.14e-78 261
Msa1019800 AT1G61430.3 38.235 374 215 8 42 412 45 405 1.34e-77 256
Msa1019800 AT1G61430.9 36.725 403 239 8 13 412 7 396 2.15e-77 260
Msa1019800 AT1G61430.1 36.725 403 239 8 13 412 7 396 2.69e-77 260
Msa1019800 AT1G61490.4 38.060 402 233 10 17 415 12 400 3.37e-77 259
Msa1019800 AT1G61490.1 38.060 402 233 10 17 415 12 400 3.37e-77 259
Msa1019800 AT1G61490.2 38.060 402 233 10 17 415 12 400 3.37e-77 259
Msa1019800 AT1G61490.5 38.060 402 233 10 17 415 12 400 3.37e-77 259
Msa1019800 AT1G61430.10 38.235 374 215 8 42 412 13 373 3.94e-77 257
Msa1019800 AT1G61370.1 36.430 409 244 10 11 412 6 405 7.66e-77 259
Msa1019800 AT1G61500.1 36.207 406 241 10 14 415 10 401 1.12e-76 258
Msa1019800 AT1G61500.3 36.207 406 241 10 14 415 15 406 1.21e-76 258
Msa1019800 AT1G61430.11 38.235 374 215 8 42 412 13 373 1.86e-76 257
Msa1019800 AT1G61430.12 38.235 374 215 8 42 412 13 373 1.86e-76 257
Msa1019800 AT1G61430.13 38.235 374 215 8 42 412 13 373 1.86e-76 257
Msa1019800 AT1G61550.1 37.374 396 233 7 20 412 9 392 1.17e-75 255
Msa1019800 AT1G61500.2 36.598 388 229 9 32 415 9 383 5.97e-75 253
Msa1019800 AT1G11280.5 35.589 399 241 9 23 415 21 409 1.46e-74 249
Msa1019800 AT1G61360.1 35.714 406 250 8 11 412 1 399 3.44e-74 252
Msa1019800 AT1G11340.2 34.750 400 235 8 27 412 85 472 5.16e-74 250
Msa1019800 AT1G11280.4 35.589 399 241 9 23 415 31 419 9.14e-74 250
Msa1019800 AT1G11280.3 35.589 399 241 9 23 415 21 409 1.15e-73 250
Msa1019800 AT1G11280.2 35.589 399 241 9 23 415 21 409 1.28e-73 250
Msa1019800 AT1G11340.3 34.750 400 235 8 27 412 85 472 1.32e-73 249
Msa1019800 AT1G11280.1 35.589 399 241 9 23 415 31 419 1.42e-73 250
Msa1019800 AT1G11340.1 34.750 400 235 8 27 412 17 404 2.64e-73 249
Msa1019800 AT1G11410.1 34.171 398 234 9 30 412 23 407 1.14e-72 248
Msa1019800 AT1G11410.4 34.171 398 234 9 30 412 30 414 1.48e-72 248
Msa1019800 AT1G61490.6 35.922 412 221 9 7 415 3 374 8.93e-72 244
Msa1019800 AT1G61490.7 35.922 412 221 9 7 415 3 374 8.93e-72 244
Msa1019800 AT1G11410.3 34.103 390 229 9 38 412 7 383 5.02e-71 243
Msa1019800 AT2G19130.1 34.812 451 242 19 9 434 1 424 1.07e-68 237
Msa1019800 AT4G21380.2 32.071 449 272 12 26 457 26 458 1.86e-68 232
Msa1019800 AT4G27290.1 33.254 418 251 10 8 412 5 407 2.26e-68 235
Msa1019800 AT4G27290.2 33.254 418 251 10 8 412 5 407 2.90e-68 236
Msa1019800 AT4G21380.1 32.071 449 272 12 26 457 26 458 5.05e-67 233
Msa1019800 AT1G61460.1 33.012 415 223 10 1 412 1 363 1.27e-66 230
Msa1019800 AT1G65790.3 35.250 400 228 13 26 412 24 405 3.74e-64 220
Msa1019800 AT1G65790.2 35.250 400 228 13 26 412 24 405 3.74e-64 220
Msa1019800 AT1G65790.1 35.250 400 228 13 26 412 24 405 9.05e-63 221
Msa1019800 AT3G12000.1 32.678 407 229 15 28 409 31 417 2.18e-61 209
Msa1019800 AT1G65800.2 33.418 395 232 12 31 411 31 408 3.16e-60 210
Msa1019800 AT1G65800.1 33.418 395 232 12 31 411 31 408 4.66e-59 210
Msa1019800 AT4G27300.1 33.495 412 229 14 25 412 21 411 1.04e-57 206
Msa1019800 AT1G61360.2 35.514 321 200 6 93 412 4 318 7.58e-57 203
Msa1019800 AT1G61360.3 35.514 321 200 6 93 412 4 318 7.58e-57 203
Msa1019800 AT1G61360.4 35.514 321 200 6 93 412 4 318 7.58e-57 203
Msa1019800 AT4G03230.8 31.144 411 249 15 1 399 1 389 5.12e-50 185
Msa1019800 AT4G03230.4 31.144 411 249 15 1 399 1 389 1.03e-49 184
Msa1019800 AT4G03230.1 31.144 411 249 15 1 399 1 389 1.03e-49 184
Msa1019800 AT1G11410.2 32.323 297 178 6 126 412 9 292 2.91e-49 181
Msa1019800 AT1G61420.3 36.923 260 154 5 156 415 1 250 1.30e-45 170
Msa1019800 AT1G61420.5 36.923 260 154 5 156 415 1 250 1.59e-45 170
Msa1019800 AT1G61380.2 37.984 258 154 5 156 412 1 253 1.79e-45 170
Msa1019800 AT1G61390.2 37.066 259 155 6 156 412 1 253 2.10e-45 170
Msa1019800 AT4G00340.2 30.239 377 232 11 31 398 20 374 2.44e-45 171
Msa1019800 AT4G00340.1 30.239 377 232 11 31 398 20 374 3.32e-45 171
Msa1019800 AT1G61490.3 37.692 260 152 6 156 415 1 250 4.72e-44 166
Msa1019800 AT1G61370.2 38.843 242 137 7 175 412 20 254 5.91e-44 166
Msa1019800 AT4G11900.10 29.505 444 247 19 7 408 6 425 1.88e-38 149
Msa1019800 AT4G11900.5 29.505 444 247 19 7 408 6 425 1.88e-38 149
Msa1019800 AT4G11900.2 29.505 444 247 19 7 408 6 425 2.38e-38 150
Msa1019800 AT4G11900.3 29.505 444 247 19 7 408 6 425 2.38e-38 150
Msa1019800 AT4G11900.6 29.505 444 247 19 7 408 6 425 2.40e-38 150
Msa1019800 AT4G11900.4 29.505 444 247 19 7 408 6 425 2.40e-38 150
Msa1019800 AT4G11900.1 29.505 444 247 19 7 408 6 425 2.78e-38 150
Msa1019800 AT4G11900.7 29.505 444 247 19 7 408 6 425 4.09e-38 149
Msa1019800 AT4G03230.5 29.697 330 207 10 76 399 7 317 6.76e-36 143
Msa1019800 AT3G16030.1 29.120 443 247 18 30 442 25 430 2.72e-31 129
Msa1019800 AT3G16030.3 28.670 436 235 17 11 407 6 404 4.92e-30 125
Msa1019800 AT3G16030.8 28.670 436 235 17 11 407 6 404 4.92e-30 125
Msa1019800 AT3G16030.5 28.670 436 235 17 11 407 6 404 4.92e-30 125
Msa1019800 AT3G16030.4 29.257 417 219 17 30 407 25 404 5.07e-30 125
Msa1019800 AT3G16030.6 29.257 417 219 17 30 407 25 404 5.70e-30 125
Msa1019800 AT3G16030.7 29.257 417 219 17 30 407 25 404 6.39e-30 125
Msa1019800 AT4G11900.9 28.496 379 210 17 68 408 1 356 2.99e-29 123
Msa1019800 AT4G11900.8 28.496 379 210 17 68 408 1 356 3.07e-29 122
Msa1019800 AT4G03230.2 29.455 275 175 10 130 399 29 289 1.01e-25 112
Msa1019800 AT4G03230.6 29.455 275 175 10 130 399 29 289 1.01e-25 112
Msa1019800 AT5G18470.1 26.256 438 224 18 10 407 10 388 2.38e-24 105
Msa1019800 AT1G67520.1 30.279 251 148 6 30 257 25 271 2.91e-24 107
Msa1019800 AT1G67520.2 30.279 251 148 6 30 257 25 271 5.36e-24 106
Msa1019800 AT1G67520.6 30.556 252 146 8 30 257 32 278 5.43e-24 107
Msa1019800 AT1G67520.3 30.556 252 146 8 30 257 25 271 5.79e-24 107
Msa1019800 AT1G67520.4 33.824 204 120 6 30 221 25 225 1.93e-23 105
Msa1019800 AT4G03230.7 29.508 244 155 8 160 399 2 232 3.43e-23 104
Msa1019800 AT4G03230.3 29.614 233 148 7 170 399 5 224 3.92e-23 104
Msa1019800 AT2G41890.1 26.075 372 229 15 46 401 42 383 8.60e-16 81.3
Msa1019800 AT3G16030.2 27.740 292 154 13 138 407 4 260 2.41e-13 73.6
Msa1019800 AT1G34300.1 24.324 333 176 14 88 395 81 362 4.91e-12 69.3
Msa1019800 AT5G39370.1 32.231 121 75 3 76 191 10 128 2.36e-11 62.0
Msa1019800 AT1G34015.1 34.694 98 46 3 303 397 4 86 4.15e-11 62.4

Find 106 sgRNAs with CRISPR-Local

Find 272 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTTAGAGCTTAGAGTTTC+AGG 0.074866 7_1:-41927830 None:intergenic
CTCTGCAAAATGTCAAATTT+TGG 0.148700 7_1:+41929725 Msa1019800:CDS
CCTTAGAACTTGCACTATTC+AGG 0.255341 7_1:+41929566 Msa1019800:CDS
AGACATTGTGGAACAAATTC+TGG 0.268902 7_1:-41929534 None:intergenic
CGAATCGCTATGTCGGAATT+TGG 0.272175 7_1:+41927894 Msa1019800:CDS
CTTTCATAATTTGACCTACT+TGG 0.277238 7_1:+41929322 Msa1019800:CDS
AGGAATGGAATAAACAAAAT+TGG 0.287882 7_1:+41928674 Msa1019800:CDS
TTCCATTCCTCTTTGTTCCT+TGG 0.291948 7_1:-41928661 None:intergenic
CTAGCATAAATTCACTTTGT+AGG 0.294485 7_1:-41929599 None:intergenic
ATGGAAAGAAAGAGGTGATT+TGG 0.310562 7_1:+41928026 Msa1019800:CDS
TAAAAGTTTCGAACTTGAAT+TGG 0.321703 7_1:-41928074 None:intergenic
GCATAACAGAAAGAACTATA+TGG 0.329419 7_1:+41928125 Msa1019800:CDS
AGATGATCCGTCTGCAAAAT+CGG 0.337461 7_1:-41928812 None:intergenic
AGATAATGAGTTGTCATATA+TGG 0.356213 7_1:-41928379 None:intergenic
TATATACAGTATGTGGCATT+GGG 0.361518 7_1:+41929489 Msa1019800:intron
TCATTCCATATGAACACTTC+AGG 0.364500 7_1:-41928301 None:intergenic
CCTGAATAGTGCAAGTTCTA+AGG 0.366441 7_1:-41929566 None:intergenic
GAAATGGAATGTGATGTTTA+TGG 0.375089 7_1:+41928568 Msa1019800:CDS
ATTGGACTGAAGGGTGTGTT+AGG 0.381908 7_1:+41928692 Msa1019800:CDS
CTTGAATTGGTTGCAACATT+CGG 0.397503 7_1:-41928061 None:intergenic
TTGCTTGTAAGTTTCATGTT+TGG 0.400776 7_1:-41928181 None:intergenic
CTATACCTGAAGTGTTCATA+TGG 0.404879 7_1:+41928296 Msa1019800:CDS
AACATGGAATAGTCATGAAA+TGG 0.405106 7_1:+41928552 Msa1019800:CDS
CTTACAAGCAACAAAATAAC+AGG 0.405748 7_1:+41928193 Msa1019800:CDS
TTTGGCAACATTACATTTGA+AGG 0.409920 7_1:-41928163 None:intergenic
CAACCTCTCAGAGATTCTTC+TGG 0.417837 7_1:+41927959 Msa1019800:CDS
CTGACATTGGTTGTATGTCT+TGG 0.420794 7_1:+41928908 Msa1019800:CDS
AGTTGATGTAATGGTGTCTA+TGG 0.421796 7_1:-41927792 None:intergenic
ACTCAACCGTATTGGCGAAC+TGG 0.423741 7_1:+41928325 Msa1019800:CDS
AACATGCAGAAGTCGATGTC+TGG 0.430389 7_1:+41928852 Msa1019800:CDS
AGCCTCAATTCACAATCCTA+TGG 0.431051 7_1:+41927921 Msa1019800:CDS
GGTTTACATGTTGGTGATGA+TGG 0.439023 7_1:+41928406 Msa1019800:CDS
AAGATAGGAATATCATCGTC+TGG 0.440075 7_1:-41929302 None:intergenic
TTATATACAGTATGTGGCAT+TGG 0.442502 7_1:+41929488 Msa1019800:intron
TCTTAGAGCTTAGAGTTTCA+GGG 0.445174 7_1:-41927829 None:intergenic
GGGAACCTTGTACTACTTGA+AGG 0.452115 7_1:+41928103 Msa1019800:CDS
TAGGTCAAATTATGAAAGAT+AGG 0.460086 7_1:-41929317 None:intergenic
ACATTACATTTGAAGGATGC+TGG 0.469330 7_1:-41928156 None:intergenic
CTTCCAATGGATGGATCATA+AGG 0.469504 7_1:-41928247 None:intergenic
CACGGACCAGTTCGCCAATA+CGG 0.474635 7_1:-41928331 None:intergenic
ACTTGGAGCTCGACAATAGT+TGG 0.478250 7_1:+41929339 Msa1019800:CDS
GGGATGAAAAGAAGAAAGAA+TGG 0.480079 7_1:+41928524 Msa1019800:CDS
AAGAGTGGTAACTTCACCTT+AGG 0.482485 7_1:+41927848 Msa1019800:CDS
TATCTCGGTGGTTTACATGT+TGG 0.482791 7_1:+41928397 Msa1019800:CDS
AATGATCTTGTGGTATTGAA+TGG 0.483224 7_1:+41928007 Msa1019800:CDS
CCTTTCAAACAGCTACATAT+CGG 0.483741 7_1:-41928631 None:intergenic
AAGGAAACTGTGAAGAGAAA+TGG 0.486215 7_1:+41928500 Msa1019800:CDS
TACATCAACTCAGTTTATCA+AGG 0.488608 7_1:+41927805 Msa1019800:CDS
CAAATAACATCGGATACAGT+TGG 0.492986 7_1:+41928451 Msa1019800:CDS
GTTGTTAAAATATCTGATAA+TGG 0.494516 7_1:+41927983 Msa1019800:CDS
GATGATCCGTCTGCAAAATC+GGG 0.494875 7_1:-41928811 None:intergenic
CCGATATGTAGCTGTTTGAA+AGG 0.494879 7_1:+41928631 Msa1019800:CDS
GGAATGAAACTCAACCGTAT+TGG 0.496818 7_1:+41928317 Msa1019800:CDS
CGATATGTAGCTGTTTGAAA+GGG 0.499672 7_1:+41928632 Msa1019800:CDS
CATAACAGAAAGAACTATAT+GGG 0.505626 7_1:+41928126 Msa1019800:CDS
CAGAAGAATCTCTGAGAGGT+TGG 0.512780 7_1:-41927958 None:intergenic
AAAGAGAAGCTTCCAATGGA+TGG 0.513517 7_1:-41928256 None:intergenic
GCCTCAATTCACAATCCTAT+GGG 0.517170 7_1:+41927922 Msa1019800:CDS
GTTTGAAAGGGTTTGAGCCA+AGG 0.519905 7_1:+41928644 Msa1019800:CDS
AATTCTACGAATCGCTATGT+CGG 0.520515 7_1:+41927887 Msa1019800:CDS
GCTTCTCTTTGAGTGTTGAA+AGG 0.522812 7_1:+41928269 Msa1019800:CDS
AGAAAGTAAAACAAACATCA+TGG 0.525875 7_1:+41928218 Msa1019800:CDS
ATCTATAATCTGAGTTCAGA+AGG 0.527630 7_1:+41928481 Msa1019800:CDS
ACACCTTATGATCCATCCAT+TGG 0.528123 7_1:+41928244 Msa1019800:CDS
TGTGATGTTTATGGTGTATG+TGG 0.532063 7_1:+41928577 Msa1019800:CDS
AATAAACAAAATTGGACTGA+AGG 0.535352 7_1:+41928682 Msa1019800:CDS
TGGCGAACTGGTCCGTGGAA+TGG 0.536417 7_1:+41928337 Msa1019800:CDS
ATTGGTTGTATGTCTTGGAC+TGG 0.540255 7_1:+41928913 Msa1019800:CDS
TATCTTTCACACTGTTGAAG+AGG 0.546374 7_1:-41928721 None:intergenic
TGCAGAGGCCTTCGGGCATG+AGG 0.548069 7_1:-41929709 None:intergenic
GAAACTGTGAAGAGAAATGG+TGG 0.550984 7_1:+41928503 Msa1019800:CDS
TTATGCCTTCAAGTAGTACA+AGG 0.552455 7_1:-41928108 None:intergenic
GGTTGCAACATTCGGTGCGT+TGG 0.554193 7_1:-41928053 None:intergenic
TATTCTTATGATGCTGACAT+TGG 0.555019 7_1:+41928895 Msa1019800:CDS
AGCCAAGGAACAAAGAGGAA+TGG 0.559258 7_1:+41928659 Msa1019800:CDS
TTCATTCTTTCAAATAACAT+CGG 0.572167 7_1:+41928441 Msa1019800:CDS
ATAAACAAAATTGGACTGAA+GGG 0.572441 7_1:+41928683 Msa1019800:CDS
AATTTCACTCGAGATTGTCA+TGG 0.576316 7_1:-41929658 None:intergenic
TATATGACAACTCATTATCT+CGG 0.580831 7_1:+41928382 Msa1019800:CDS
TAGAATATTAAAACACAGCA+TGG 0.585742 7_1:-41927756 None:intergenic
AGATAGGAATATCATCGTCT+GGG 0.589965 7_1:-41929301 None:intergenic
GGTCTCTGTTAAGCACCCAT+AGG 0.590887 7_1:-41927937 None:intergenic
AGAAAGAATGGAAAGTAACA+TGG 0.595843 7_1:+41928536 Msa1019800:CDS
ACCCATAGGATTGTGAATTG+AGG 0.601047 7_1:-41927923 None:intergenic
GATAAACTGAGTTGATGTAA+TGG 0.602031 7_1:-41927801 None:intergenic
GGACTGAAGGGTGTGTTAGG+AGG 0.607592 7_1:+41928695 Msa1019800:CDS
AAATCGGGAACTTTGACCAT+CGG 0.609834 7_1:-41928796 None:intergenic
ACTCAAAGAGAAGCTTCCAA+TGG 0.609942 7_1:-41928260 None:intergenic
AGGTGTGATAAAAGACATTG+TGG 0.610230 7_1:-41929546 None:intergenic
ATCGCTATGTCGGAATTTGG+TGG 0.612476 7_1:+41927897 Msa1019800:CDS
ACTATTGTCGAGCTCCAAGT+AGG 0.613460 7_1:-41929336 None:intergenic
TGATAATGGTAATGATCTTG+TGG 0.621215 7_1:+41927997 Msa1019800:CDS
CATGTTGGTGATGATGGAGA+AGG 0.625827 7_1:+41928412 Msa1019800:CDS
GGTATTGAATGGAAAGAAAG+AGG 0.631723 7_1:+41928018 Msa1019800:CDS
AAAATTCTCCTCATGCCCGA+AGG 0.631887 7_1:+41929701 Msa1019800:CDS
CGTATTGGCGAACTGGTCCG+TGG 0.635773 7_1:+41928332 Msa1019800:CDS
GGGGAATGTAGAAGATTGCG+TGG 0.648208 7_1:+41929509 Msa1019800:CDS
ACTTGCACTATTCAGGACAA+AGG 0.648793 7_1:+41929573 Msa1019800:CDS
ATATACAGTATGTGGCATTG+GGG 0.656270 7_1:+41929490 Msa1019800:intron
ATGACAACTCATTATCTCGG+TGG 0.661261 7_1:+41928385 Msa1019800:CDS
GAAACTCTAAGCTCTAAGAG+TGG 0.665608 7_1:+41927833 Msa1019800:CDS
TGCACTATTCAGGACAAAGG+AGG 0.667085 7_1:+41929576 Msa1019800:CDS
AGTGAAGACAGTAACACTGA+TGG 0.669058 7_1:+41928760 Msa1019800:CDS
GTTTGAGCCAAGGAACAAAG+AGG 0.677041 7_1:+41928654 Msa1019800:CDS
ACACCAGAAGAATCTCTGAG+AGG 0.755754 7_1:-41927962 None:intergenic
AAACTGTGAAGAGAAATGGT+GGG 0.768406 7_1:+41928504 Msa1019800:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AACTTTTCTAATATTATTAT+TGG + chr7_1:41929090-41929109 Msa1019800:intron 10.0%
!!! AACTTTTCTAATATTATTAT+TGG + chr7_1:41929090-41929109 Msa1019800:intron 10.0%
!! AGAAAGAAACAAAAAAATTA+GGG - chr7_1:41929259-41929278 None:intergenic 15.0%
!! TAGAAAGAAACAAAAAAATT+AGG - chr7_1:41929260-41929279 None:intergenic 15.0%
!! TGTTTCTTTCTATATAATAT+AGG + chr7_1:41929268-41929287 Msa1019800:intron 15.0%
!! AGAAAGAAACAAAAAAATTA+GGG - chr7_1:41929259-41929278 None:intergenic 15.0%
!! TAGAAAGAAACAAAAAAATT+AGG - chr7_1:41929260-41929279 None:intergenic 15.0%
!! TGTTTCTTTCTATATAATAT+AGG + chr7_1:41929268-41929287 Msa1019800:intron 15.0%
!! GTTGTTAAAATATCTGATAA+TGG + chr7_1:41927983-41928002 Msa1019800:CDS 20.0%
!! TTCATTCTTTCAAATAACAT+CGG + chr7_1:41928441-41928460 Msa1019800:CDS 20.0%
!! NNNNNNNTTGTATGTCAACT+AGG - chr7_1:41928942-41928961 None:intergenic 20.0%
!! TTAAGTTTAAGAGTCATATT+TGG + chr7_1:41929427-41929446 Msa1019800:intron 20.0%
!!! TTCATTTTATATACAGTATG+TGG + chr7_1:41929482-41929501 Msa1019800:intron 20.0%
!! GTTGTTAAAATATCTGATAA+TGG + chr7_1:41927983-41928002 Msa1019800:CDS 20.0%
!! TTCATTCTTTCAAATAACAT+CGG + chr7_1:41928441-41928460 Msa1019800:CDS 20.0%
!! NNNNNNNTTGTATGTCAACT+AGG - chr7_1:41928942-41928961 None:intergenic 20.0%
!! TTAAGTTTAAGAGTCATATT+TGG + chr7_1:41929427-41929446 Msa1019800:intron 20.0%
!!! TTCATTTTATATACAGTATG+TGG + chr7_1:41929482-41929501 Msa1019800:intron 20.0%
! TAGAATATTAAAACACAGCA+TGG - chr7_1:41927759-41927778 None:intergenic 25.0%
! TAAAAGTTTCGAACTTGAAT+TGG - chr7_1:41928077-41928096 None:intergenic 25.0%
! CATAACAGAAAGAACTATAT+GGG + chr7_1:41928126-41928145 Msa1019800:CDS 25.0%
! AGAAAGTAAAACAAACATCA+TGG + chr7_1:41928218-41928237 Msa1019800:CDS 25.0%
! AGATAATGAGTTGTCATATA+TGG - chr7_1:41928382-41928401 None:intergenic 25.0%
! TATATGACAACTCATTATCT+CGG + chr7_1:41928382-41928401 Msa1019800:CDS 25.0%
! AGGAATGGAATAAACAAAAT+TGG + chr7_1:41928674-41928693 Msa1019800:CDS 25.0%
! AATAAACAAAATTGGACTGA+AGG + chr7_1:41928682-41928701 Msa1019800:CDS 25.0%
! ATAAACAAAATTGGACTGAA+GGG + chr7_1:41928683-41928702 Msa1019800:CDS 25.0%
! ATTGAAAGTAATCAGATGAT+TGG - chr7_1:41929065-41929084 None:intergenic 25.0%
! TTTCCATGACAAAAAAATTG+AGG - chr7_1:41929187-41929206 None:intergenic 25.0%
! TAGGTCAAATTATGAAAGAT+AGG - chr7_1:41929320-41929339 None:intergenic 25.0%
!! TCAAAATCTCAAACTTTTAG+AGG + chr7_1:41929400-41929419 Msa1019800:CDS 25.0%
! TAGAATATTAAAACACAGCA+TGG - chr7_1:41927759-41927778 None:intergenic 25.0%
! TAAAAGTTTCGAACTTGAAT+TGG - chr7_1:41928077-41928096 None:intergenic 25.0%
! CATAACAGAAAGAACTATAT+GGG + chr7_1:41928126-41928145 Msa1019800:CDS 25.0%
! AGAAAGTAAAACAAACATCA+TGG + chr7_1:41928218-41928237 Msa1019800:CDS 25.0%
! AGATAATGAGTTGTCATATA+TGG - chr7_1:41928382-41928401 None:intergenic 25.0%
! TATATGACAACTCATTATCT+CGG + chr7_1:41928382-41928401 Msa1019800:CDS 25.0%
! AGGAATGGAATAAACAAAAT+TGG + chr7_1:41928674-41928693 Msa1019800:CDS 25.0%
! AATAAACAAAATTGGACTGA+AGG + chr7_1:41928682-41928701 Msa1019800:CDS 25.0%
! ATAAACAAAATTGGACTGAA+GGG + chr7_1:41928683-41928702 Msa1019800:CDS 25.0%
! ATTGAAAGTAATCAGATGAT+TGG - chr7_1:41929065-41929084 None:intergenic 25.0%
! TTTCCATGACAAAAAAATTG+AGG - chr7_1:41929187-41929206 None:intergenic 25.0%
! TAGGTCAAATTATGAAAGAT+AGG - chr7_1:41929320-41929339 None:intergenic 25.0%
!! TCAAAATCTCAAACTTTTAG+AGG + chr7_1:41929400-41929419 Msa1019800:CDS 25.0%
!! GATAAACTGAGTTGATGTAA+TGG - chr7_1:41927804-41927823 None:intergenic 30.0%
TACATCAACTCAGTTTATCA+AGG + chr7_1:41927805-41927824 Msa1019800:CDS 30.0%
TTCAAGACTAAAAAAGCCTA+AGG - chr7_1:41927867-41927886 None:intergenic 30.0%
!! TGATAATGGTAATGATCTTG+TGG + chr7_1:41927997-41928016 Msa1019800:CDS 30.0%
! AATGATCTTGTGGTATTGAA+TGG + chr7_1:41928007-41928026 Msa1019800:CDS 30.0%
! AGTTCGAAACTTTTAGATTC+AGG + chr7_1:41928082-41928101 Msa1019800:CDS 30.0%
! GTTCGAAACTTTTAGATTCA+GGG + chr7_1:41928083-41928102 Msa1019800:CDS 30.0%
GCATAACAGAAAGAACTATA+TGG + chr7_1:41928125-41928144 Msa1019800:CDS 30.0%
TTTGGCAACATTACATTTGA+AGG - chr7_1:41928166-41928185 None:intergenic 30.0%
TTGCTTGTAAGTTTCATGTT+TGG - chr7_1:41928184-41928203 None:intergenic 30.0%
CTTACAAGCAACAAAATAAC+AGG + chr7_1:41928193-41928212 Msa1019800:CDS 30.0%
GTAAAAATCTTACCATTCCA+CGG - chr7_1:41928352-41928371 None:intergenic 30.0%
! TGGAATGGTAAGATTTTTAC+AGG + chr7_1:41928352-41928371 Msa1019800:CDS 30.0%
! GGAATGGTAAGATTTTTACA+GGG + chr7_1:41928353-41928372 Msa1019800:CDS 30.0%
ATCTATAATCTGAGTTCAGA+AGG + chr7_1:41928481-41928500 Msa1019800:CDS 30.0%
AGAAAGAATGGAAAGTAACA+TGG + chr7_1:41928536-41928555 Msa1019800:CDS 30.0%
AACATGGAATAGTCATGAAA+TGG + chr7_1:41928552-41928571 Msa1019800:CDS 30.0%
GAAATGGAATGTGATGTTTA+TGG + chr7_1:41928568-41928587 Msa1019800:CDS 30.0%
TATTCTTATGATGCTGACAT+TGG + chr7_1:41928895-41928914 Msa1019800:CDS 30.0%
CAGTTTAGTGTATTCAATTG+AGG - chr7_1:41929159-41929178 None:intergenic 30.0%
TCATGGAAAAACAAAAGCAA+AGG + chr7_1:41929198-41929217 Msa1019800:intron 30.0%
CTTTCATAATTTGACCTACT+TGG + chr7_1:41929322-41929341 Msa1019800:CDS 30.0%
!!! GTTTGAGATTTTGAAGCATA+GGG - chr7_1:41929394-41929413 None:intergenic 30.0%
!!! AGTTTGAGATTTTGAAGCAT+AGG - chr7_1:41929395-41929414 None:intergenic 30.0%
TTATATACAGTATGTGGCAT+TGG + chr7_1:41929488-41929507 Msa1019800:intron 30.0%
TATATACAGTATGTGGCATT+GGG + chr7_1:41929489-41929508 Msa1019800:intron 30.0%
CTAGCATAAATTCACTTTGT+AGG - chr7_1:41929602-41929621 None:intergenic 30.0%
! CAAAATTTGACATTTTGCAG+AGG - chr7_1:41929727-41929746 None:intergenic 30.0%
! CTCTGCAAAATGTCAAATTT+TGG + chr7_1:41929725-41929744 Msa1019800:CDS 30.0%
!! GATAAACTGAGTTGATGTAA+TGG - chr7_1:41927804-41927823 None:intergenic 30.0%
TACATCAACTCAGTTTATCA+AGG + chr7_1:41927805-41927824 Msa1019800:CDS 30.0%
TTCAAGACTAAAAAAGCCTA+AGG - chr7_1:41927867-41927886 None:intergenic 30.0%
!! TGATAATGGTAATGATCTTG+TGG + chr7_1:41927997-41928016 Msa1019800:CDS 30.0%
! AATGATCTTGTGGTATTGAA+TGG + chr7_1:41928007-41928026 Msa1019800:CDS 30.0%
! AGTTCGAAACTTTTAGATTC+AGG + chr7_1:41928082-41928101 Msa1019800:CDS 30.0%
! GTTCGAAACTTTTAGATTCA+GGG + chr7_1:41928083-41928102 Msa1019800:CDS 30.0%
GCATAACAGAAAGAACTATA+TGG + chr7_1:41928125-41928144 Msa1019800:CDS 30.0%
TTTGGCAACATTACATTTGA+AGG - chr7_1:41928166-41928185 None:intergenic 30.0%
TTGCTTGTAAGTTTCATGTT+TGG - chr7_1:41928184-41928203 None:intergenic 30.0%
CTTACAAGCAACAAAATAAC+AGG + chr7_1:41928193-41928212 Msa1019800:CDS 30.0%
GTAAAAATCTTACCATTCCA+CGG - chr7_1:41928352-41928371 None:intergenic 30.0%
! TGGAATGGTAAGATTTTTAC+AGG + chr7_1:41928352-41928371 Msa1019800:CDS 30.0%
! GGAATGGTAAGATTTTTACA+GGG + chr7_1:41928353-41928372 Msa1019800:CDS 30.0%
ATCTATAATCTGAGTTCAGA+AGG + chr7_1:41928481-41928500 Msa1019800:CDS 30.0%
AGAAAGAATGGAAAGTAACA+TGG + chr7_1:41928536-41928555 Msa1019800:CDS 30.0%
AACATGGAATAGTCATGAAA+TGG + chr7_1:41928552-41928571 Msa1019800:CDS 30.0%
GAAATGGAATGTGATGTTTA+TGG + chr7_1:41928568-41928587 Msa1019800:CDS 30.0%
TATTCTTATGATGCTGACAT+TGG + chr7_1:41928895-41928914 Msa1019800:CDS 30.0%
CAGTTTAGTGTATTCAATTG+AGG - chr7_1:41929159-41929178 None:intergenic 30.0%
TCATGGAAAAACAAAAGCAA+AGG + chr7_1:41929198-41929217 Msa1019800:intron 30.0%
CTTTCATAATTTGACCTACT+TGG + chr7_1:41929322-41929341 Msa1019800:CDS 30.0%
!!! GTTTGAGATTTTGAAGCATA+GGG - chr7_1:41929394-41929413 None:intergenic 30.0%
!!! AGTTTGAGATTTTGAAGCAT+AGG - chr7_1:41929395-41929414 None:intergenic 30.0%
TTATATACAGTATGTGGCAT+TGG + chr7_1:41929488-41929507 Msa1019800:intron 30.0%
TATATACAGTATGTGGCATT+GGG + chr7_1:41929489-41929508 Msa1019800:intron 30.0%
CTAGCATAAATTCACTTTGT+AGG - chr7_1:41929602-41929621 None:intergenic 30.0%
! CAAAATTTGACATTTTGCAG+AGG - chr7_1:41929727-41929746 None:intergenic 30.0%
! CTCTGCAAAATGTCAAATTT+TGG + chr7_1:41929725-41929744 Msa1019800:CDS 30.0%
! AGTTGATGTAATGGTGTCTA+TGG - chr7_1:41927795-41927814 None:intergenic 35.0%
TCTTAGAGCTTAGAGTTTCA+GGG - chr7_1:41927832-41927851 None:intergenic 35.0%
AATTCTACGAATCGCTATGT+CGG + chr7_1:41927887-41927906 Msa1019800:CDS 35.0%
! GGTATTGAATGGAAAGAAAG+AGG + chr7_1:41928018-41928037 Msa1019800:CDS 35.0%
ATGGAAAGAAAGAGGTGATT+TGG + chr7_1:41928026-41928045 Msa1019800:CDS 35.0%
CTTGAATTGGTTGCAACATT+CGG - chr7_1:41928064-41928083 None:intergenic 35.0%
TTATGCCTTCAAGTAGTACA+AGG - chr7_1:41928111-41928130 None:intergenic 35.0%
ACATTACATTTGAAGGATGC+TGG - chr7_1:41928159-41928178 None:intergenic 35.0%
! CTATACCTGAAGTGTTCATA+TGG + chr7_1:41928296-41928315 Msa1019800:CDS 35.0%
TCATTCCATATGAACACTTC+AGG - chr7_1:41928304-41928323 None:intergenic 35.0%
CAAATAACATCGGATACAGT+TGG + chr7_1:41928451-41928470 Msa1019800:CDS 35.0%
AAGGAAACTGTGAAGAGAAA+TGG + chr7_1:41928500-41928519 Msa1019800:CDS 35.0%
AAACTGTGAAGAGAAATGGT+GGG + chr7_1:41928504-41928523 Msa1019800:CDS 35.0%
GGGATGAAAAGAAGAAAGAA+TGG + chr7_1:41928524-41928543 Msa1019800:CDS 35.0%
TGTGATGTTTATGGTGTATG+TGG + chr7_1:41928577-41928596 Msa1019800:CDS 35.0%
CCTTTCAAACAGCTACATAT+CGG - chr7_1:41928634-41928653 None:intergenic 35.0%
CGATATGTAGCTGTTTGAAA+GGG + chr7_1:41928632-41928651 Msa1019800:CDS 35.0%
TATCTTTCACACTGTTGAAG+AGG - chr7_1:41928724-41928743 None:intergenic 35.0%
TGATATGTTTGTGTTGTGTC+TGG + chr7_1:41929116-41929135 Msa1019800:intron 35.0%
CCATGACAAAAAAATTGAGG+TGG - chr7_1:41929184-41929203 None:intergenic 35.0%
!!! CCACCTCAATTTTTTTGTCA+TGG + chr7_1:41929181-41929200 Msa1019800:intron 35.0%
AGATAGGAATATCATCGTCT+GGG - chr7_1:41929304-41929323 None:intergenic 35.0%
AAGATAGGAATATCATCGTC+TGG - chr7_1:41929305-41929324 None:intergenic 35.0%
ATATACAGTATGTGGCATTG+GGG + chr7_1:41929490-41929509 Msa1019800:intron 35.0%
AGACATTGTGGAACAAATTC+TGG - chr7_1:41929537-41929556 None:intergenic 35.0%
AGGTGTGATAAAAGACATTG+TGG - chr7_1:41929549-41929568 None:intergenic 35.0%
AATTTCACTCGAGATTGTCA+TGG - chr7_1:41929661-41929680 None:intergenic 35.0%
! AGTTGATGTAATGGTGTCTA+TGG - chr7_1:41927795-41927814 None:intergenic 35.0%
TCTTAGAGCTTAGAGTTTCA+GGG - chr7_1:41927832-41927851 None:intergenic 35.0%
AATTCTACGAATCGCTATGT+CGG + chr7_1:41927887-41927906 Msa1019800:CDS 35.0%
! GGTATTGAATGGAAAGAAAG+AGG + chr7_1:41928018-41928037 Msa1019800:CDS 35.0%
ATGGAAAGAAAGAGGTGATT+TGG + chr7_1:41928026-41928045 Msa1019800:CDS 35.0%
CTTGAATTGGTTGCAACATT+CGG - chr7_1:41928064-41928083 None:intergenic 35.0%
TTATGCCTTCAAGTAGTACA+AGG - chr7_1:41928111-41928130 None:intergenic 35.0%
ACATTACATTTGAAGGATGC+TGG - chr7_1:41928159-41928178 None:intergenic 35.0%
! CTATACCTGAAGTGTTCATA+TGG + chr7_1:41928296-41928315 Msa1019800:CDS 35.0%
TCATTCCATATGAACACTTC+AGG - chr7_1:41928304-41928323 None:intergenic 35.0%
CAAATAACATCGGATACAGT+TGG + chr7_1:41928451-41928470 Msa1019800:CDS 35.0%
AAGGAAACTGTGAAGAGAAA+TGG + chr7_1:41928500-41928519 Msa1019800:CDS 35.0%
AAACTGTGAAGAGAAATGGT+GGG + chr7_1:41928504-41928523 Msa1019800:CDS 35.0%
GGGATGAAAAGAAGAAAGAA+TGG + chr7_1:41928524-41928543 Msa1019800:CDS 35.0%
TGTGATGTTTATGGTGTATG+TGG + chr7_1:41928577-41928596 Msa1019800:CDS 35.0%
CCTTTCAAACAGCTACATAT+CGG - chr7_1:41928634-41928653 None:intergenic 35.0%
CGATATGTAGCTGTTTGAAA+GGG + chr7_1:41928632-41928651 Msa1019800:CDS 35.0%
TATCTTTCACACTGTTGAAG+AGG - chr7_1:41928724-41928743 None:intergenic 35.0%
TGATATGTTTGTGTTGTGTC+TGG + chr7_1:41929116-41929135 Msa1019800:intron 35.0%
CCATGACAAAAAAATTGAGG+TGG - chr7_1:41929184-41929203 None:intergenic 35.0%
!!! CCACCTCAATTTTTTTGTCA+TGG + chr7_1:41929181-41929200 Msa1019800:intron 35.0%
AGATAGGAATATCATCGTCT+GGG - chr7_1:41929304-41929323 None:intergenic 35.0%
AAGATAGGAATATCATCGTC+TGG - chr7_1:41929305-41929324 None:intergenic 35.0%
ATATACAGTATGTGGCATTG+GGG + chr7_1:41929490-41929509 Msa1019800:intron 35.0%
AGACATTGTGGAACAAATTC+TGG - chr7_1:41929537-41929556 None:intergenic 35.0%
AGGTGTGATAAAAGACATTG+TGG - chr7_1:41929549-41929568 None:intergenic 35.0%
AATTTCACTCGAGATTGTCA+TGG - chr7_1:41929661-41929680 None:intergenic 35.0%
CTCTTAGAGCTTAGAGTTTC+AGG - chr7_1:41927833-41927852 None:intergenic 40.0%
!! GAAACTCTAAGCTCTAAGAG+TGG + chr7_1:41927833-41927852 Msa1019800:CDS 40.0%
AAGAGTGGTAACTTCACCTT+AGG + chr7_1:41927848-41927867 Msa1019800:CDS 40.0%
AGCCTCAATTCACAATCCTA+TGG + chr7_1:41927921-41927940 Msa1019800:CDS 40.0%
GCCTCAATTCACAATCCTAT+GGG + chr7_1:41927922-41927941 Msa1019800:CDS 40.0%
ACCCATAGGATTGTGAATTG+AGG - chr7_1:41927926-41927945 None:intergenic 40.0%
ACACCTTATGATCCATCCAT+TGG + chr7_1:41928244-41928263 Msa1019800:CDS 40.0%
CTTCCAATGGATGGATCATA+AGG - chr7_1:41928250-41928269 None:intergenic 40.0%
AAAGAGAAGCTTCCAATGGA+TGG - chr7_1:41928259-41928278 None:intergenic 40.0%
ACTCAAAGAGAAGCTTCCAA+TGG - chr7_1:41928263-41928282 None:intergenic 40.0%
!! GCTTCTCTTTGAGTGTTGAA+AGG + chr7_1:41928269-41928288 Msa1019800:CDS 40.0%
GGAATGAAACTCAACCGTAT+TGG + chr7_1:41928317-41928336 Msa1019800:CDS 40.0%
ATGACAACTCATTATCTCGG+TGG + chr7_1:41928385-41928404 Msa1019800:CDS 40.0%
TATCTCGGTGGTTTACATGT+TGG + chr7_1:41928397-41928416 Msa1019800:CDS 40.0%
!! GGTTTACATGTTGGTGATGA+TGG + chr7_1:41928406-41928425 Msa1019800:CDS 40.0%
GAAACTGTGAAGAGAAATGG+TGG + chr7_1:41928503-41928522 Msa1019800:CDS 40.0%
CCGATATGTAGCTGTTTGAA+AGG + chr7_1:41928631-41928650 Msa1019800:CDS 40.0%
TTCCATTCCTCTTTGTTCCT+TGG - chr7_1:41928664-41928683 None:intergenic 40.0%
AGTGAAGACAGTAACACTGA+TGG + chr7_1:41928760-41928779 Msa1019800:CDS 40.0%
!!! TGGTTTTTTGAAACTGCCGA+TGG + chr7_1:41928780-41928799 Msa1019800:CDS 40.0%
AAATCGGGAACTTTGACCAT+CGG - chr7_1:41928799-41928818 None:intergenic 40.0%
! AAAGTTCCCGATTTTGCAGA+CGG + chr7_1:41928805-41928824 Msa1019800:CDS 40.0%
AGATGATCCGTCTGCAAAAT+CGG - chr7_1:41928815-41928834 None:intergenic 40.0%
! CTGACATTGGTTGTATGTCT+TGG + chr7_1:41928908-41928927 Msa1019800:CDS 40.0%
ATTGGTTGTATGTCTTGGAC+TGG + chr7_1:41928913-41928932 Msa1019800:CDS 40.0%
CCTGAATAGTGCAAGTTCTA+AGG - chr7_1:41929569-41929588 None:intergenic 40.0%
CCTTAGAACTTGCACTATTC+AGG + chr7_1:41929566-41929585 Msa1019800:CDS 40.0%
ACTTGCACTATTCAGGACAA+AGG + chr7_1:41929573-41929592 Msa1019800:CDS 40.0%
CTCTTAGAGCTTAGAGTTTC+AGG - chr7_1:41927833-41927852 None:intergenic 40.0%
!! GAAACTCTAAGCTCTAAGAG+TGG + chr7_1:41927833-41927852 Msa1019800:CDS 40.0%
AAGAGTGGTAACTTCACCTT+AGG + chr7_1:41927848-41927867 Msa1019800:CDS 40.0%
AGCCTCAATTCACAATCCTA+TGG + chr7_1:41927921-41927940 Msa1019800:CDS 40.0%
GCCTCAATTCACAATCCTAT+GGG + chr7_1:41927922-41927941 Msa1019800:CDS 40.0%
ACCCATAGGATTGTGAATTG+AGG - chr7_1:41927926-41927945 None:intergenic 40.0%
ACACCTTATGATCCATCCAT+TGG + chr7_1:41928244-41928263 Msa1019800:CDS 40.0%
CTTCCAATGGATGGATCATA+AGG - chr7_1:41928250-41928269 None:intergenic 40.0%
AAAGAGAAGCTTCCAATGGA+TGG - chr7_1:41928259-41928278 None:intergenic 40.0%
ACTCAAAGAGAAGCTTCCAA+TGG - chr7_1:41928263-41928282 None:intergenic 40.0%
!! GCTTCTCTTTGAGTGTTGAA+AGG + chr7_1:41928269-41928288 Msa1019800:CDS 40.0%
GGAATGAAACTCAACCGTAT+TGG + chr7_1:41928317-41928336 Msa1019800:CDS 40.0%
ATGACAACTCATTATCTCGG+TGG + chr7_1:41928385-41928404 Msa1019800:CDS 40.0%
TATCTCGGTGGTTTACATGT+TGG + chr7_1:41928397-41928416 Msa1019800:CDS 40.0%
!! GGTTTACATGTTGGTGATGA+TGG + chr7_1:41928406-41928425 Msa1019800:CDS 40.0%
GAAACTGTGAAGAGAAATGG+TGG + chr7_1:41928503-41928522 Msa1019800:CDS 40.0%
CCGATATGTAGCTGTTTGAA+AGG + chr7_1:41928631-41928650 Msa1019800:CDS 40.0%
TTCCATTCCTCTTTGTTCCT+TGG - chr7_1:41928664-41928683 None:intergenic 40.0%
AGTGAAGACAGTAACACTGA+TGG + chr7_1:41928760-41928779 Msa1019800:CDS 40.0%
!!! TGGTTTTTTGAAACTGCCGA+TGG + chr7_1:41928780-41928799 Msa1019800:CDS 40.0%
AAATCGGGAACTTTGACCAT+CGG - chr7_1:41928799-41928818 None:intergenic 40.0%
! AAAGTTCCCGATTTTGCAGA+CGG + chr7_1:41928805-41928824 Msa1019800:CDS 40.0%
AGATGATCCGTCTGCAAAAT+CGG - chr7_1:41928815-41928834 None:intergenic 40.0%
! CTGACATTGGTTGTATGTCT+TGG + chr7_1:41928908-41928927 Msa1019800:CDS 40.0%
ATTGGTTGTATGTCTTGGAC+TGG + chr7_1:41928913-41928932 Msa1019800:CDS 40.0%
CCTGAATAGTGCAAGTTCTA+AGG - chr7_1:41929569-41929588 None:intergenic 40.0%
CCTTAGAACTTGCACTATTC+AGG + chr7_1:41929566-41929585 Msa1019800:CDS 40.0%
ACTTGCACTATTCAGGACAA+AGG + chr7_1:41929573-41929592 Msa1019800:CDS 40.0%
CGAATCGCTATGTCGGAATT+TGG + chr7_1:41927894-41927913 Msa1019800:CDS 45.0%
ATCGCTATGTCGGAATTTGG+TGG + chr7_1:41927897-41927916 Msa1019800:CDS 45.0%
! CAGAAGAATCTCTGAGAGGT+TGG - chr7_1:41927961-41927980 None:intergenic 45.0%
CAACCTCTCAGAGATTCTTC+TGG + chr7_1:41927959-41927978 Msa1019800:CDS 45.0%
ACACCAGAAGAATCTCTGAG+AGG - chr7_1:41927965-41927984 None:intergenic 45.0%
GGGAACCTTGTACTACTTGA+AGG + chr7_1:41928103-41928122 Msa1019800:CDS 45.0%
!! CATGTTGGTGATGATGGAGA+AGG + chr7_1:41928412-41928431 Msa1019800:CDS 45.0%
GTTTGAAAGGGTTTGAGCCA+AGG + chr7_1:41928644-41928663 Msa1019800:CDS 45.0%
GTTTGAGCCAAGGAACAAAG+AGG + chr7_1:41928654-41928673 Msa1019800:CDS 45.0%
AGCCAAGGAACAAAGAGGAA+TGG + chr7_1:41928659-41928678 Msa1019800:CDS 45.0%
! ATTGGACTGAAGGGTGTGTT+AGG + chr7_1:41928692-41928711 Msa1019800:CDS 45.0%
GATGATCCGTCTGCAAAATC+GGG - chr7_1:41928814-41928833 None:intergenic 45.0%
AACATGCAGAAGTCGATGTC+TGG + chr7_1:41928852-41928871 Msa1019800:CDS 45.0%
GTTTGTGTTGTGTCTGGTGT+CGG + chr7_1:41929122-41929141 Msa1019800:intron 45.0%
ACTATTGTCGAGCTCCAAGT+AGG - chr7_1:41929339-41929358 None:intergenic 45.0%
ACTTGGAGCTCGACAATAGT+TGG + chr7_1:41929339-41929358 Msa1019800:CDS 45.0%
!!! GATTTTGAAGCATAGGGCAG+TGG - chr7_1:41929388-41929407 None:intergenic 45.0%
TGCACTATTCAGGACAAAGG+AGG + chr7_1:41929576-41929595 Msa1019800:CDS 45.0%
AAAATTCTCCTCATGCCCGA+AGG + chr7_1:41929701-41929720 Msa1019800:CDS 45.0%
! TGACATTTTGCAGAGGCCTT+CGG - chr7_1:41929720-41929739 None:intergenic 45.0%
CGAATCGCTATGTCGGAATT+TGG + chr7_1:41927894-41927913 Msa1019800:CDS 45.0%
ATCGCTATGTCGGAATTTGG+TGG + chr7_1:41927897-41927916 Msa1019800:CDS 45.0%
! CAGAAGAATCTCTGAGAGGT+TGG - chr7_1:41927961-41927980 None:intergenic 45.0%
CAACCTCTCAGAGATTCTTC+TGG + chr7_1:41927959-41927978 Msa1019800:CDS 45.0%
ACACCAGAAGAATCTCTGAG+AGG - chr7_1:41927965-41927984 None:intergenic 45.0%
GGGAACCTTGTACTACTTGA+AGG + chr7_1:41928103-41928122 Msa1019800:CDS 45.0%
!! CATGTTGGTGATGATGGAGA+AGG + chr7_1:41928412-41928431 Msa1019800:CDS 45.0%
GTTTGAAAGGGTTTGAGCCA+AGG + chr7_1:41928644-41928663 Msa1019800:CDS 45.0%
GTTTGAGCCAAGGAACAAAG+AGG + chr7_1:41928654-41928673 Msa1019800:CDS 45.0%
AGCCAAGGAACAAAGAGGAA+TGG + chr7_1:41928659-41928678 Msa1019800:CDS 45.0%
! ATTGGACTGAAGGGTGTGTT+AGG + chr7_1:41928692-41928711 Msa1019800:CDS 45.0%
GATGATCCGTCTGCAAAATC+GGG - chr7_1:41928814-41928833 None:intergenic 45.0%
AACATGCAGAAGTCGATGTC+TGG + chr7_1:41928852-41928871 Msa1019800:CDS 45.0%
GTTTGTGTTGTGTCTGGTGT+CGG + chr7_1:41929122-41929141 Msa1019800:intron 45.0%
ACTATTGTCGAGCTCCAAGT+AGG - chr7_1:41929339-41929358 None:intergenic 45.0%
ACTTGGAGCTCGACAATAGT+TGG + chr7_1:41929339-41929358 Msa1019800:CDS 45.0%
!!! GATTTTGAAGCATAGGGCAG+TGG - chr7_1:41929388-41929407 None:intergenic 45.0%
TGCACTATTCAGGACAAAGG+AGG + chr7_1:41929576-41929595 Msa1019800:CDS 45.0%
AAAATTCTCCTCATGCCCGA+AGG + chr7_1:41929701-41929720 Msa1019800:CDS 45.0%
! TGACATTTTGCAGAGGCCTT+CGG - chr7_1:41929720-41929739 None:intergenic 45.0%
GGTCTCTGTTAAGCACCCAT+AGG - chr7_1:41927940-41927959 None:intergenic 50.0%
! ACTCAACCGTATTGGCGAAC+TGG + chr7_1:41928325-41928344 Msa1019800:CDS 50.0%
GGGGAATGTAGAAGATTGCG+TGG + chr7_1:41929509-41929528 Msa1019800:CDS 50.0%
! GACATTTTGCAGAGGCCTTC+GGG - chr7_1:41929719-41929738 None:intergenic 50.0%
GGTCTCTGTTAAGCACCCAT+AGG - chr7_1:41927940-41927959 None:intergenic 50.0%
! ACTCAACCGTATTGGCGAAC+TGG + chr7_1:41928325-41928344 Msa1019800:CDS 50.0%
GGGGAATGTAGAAGATTGCG+TGG + chr7_1:41929509-41929528 Msa1019800:CDS 50.0%
! GACATTTTGCAGAGGCCTTC+GGG - chr7_1:41929719-41929738 None:intergenic 50.0%
!! GGTTGCAACATTCGGTGCGT+TGG - chr7_1:41928056-41928075 None:intergenic 55.0%
CACGGACCAGTTCGCCAATA+CGG - chr7_1:41928334-41928353 None:intergenic 55.0%
! GGACTGAAGGGTGTGTTAGG+AGG + chr7_1:41928695-41928714 Msa1019800:CDS 55.0%
!! GGTTGCAACATTCGGTGCGT+TGG - chr7_1:41928056-41928075 None:intergenic 55.0%
CACGGACCAGTTCGCCAATA+CGG - chr7_1:41928334-41928353 None:intergenic 55.0%
! GGACTGAAGGGTGTGTTAGG+AGG + chr7_1:41928695-41928714 Msa1019800:CDS 55.0%
! CGTATTGGCGAACTGGTCCG+TGG + chr7_1:41928332-41928351 Msa1019800:CDS 60.0%
TGGCGAACTGGTCCGTGGAA+TGG + chr7_1:41928337-41928356 Msa1019800:CDS 60.0%
! CGTATTGGCGAACTGGTCCG+TGG + chr7_1:41928332-41928351 Msa1019800:CDS 60.0%
TGGCGAACTGGTCCGTGGAA+TGG + chr7_1:41928337-41928356 Msa1019800:CDS 60.0%
TGCAGAGGCCTTCGGGCATG+AGG - chr7_1:41929712-41929731 None:intergenic 65.0%
TGCAGAGGCCTTCGGGCATG+AGG - chr7_1:41929712-41929731 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 41927710 41929767 41927710 ID=Msa1019800;Name=Msa1019800
chr7_1 mRNA 41927710 41929767 41927710 ID=Msa1019800-mRNA-1;Parent=Msa1019800;Name=Msa1019800-mRNA-1;_AED=0.30;_eAED=0.30;_QI=0|0|0|0.33|1|1|3|0|544
chr7_1 exon 41927710 41928942 41927710 ID=Msa1019800-mRNA-1:exon:8166;Parent=Msa1019800-mRNA-1
chr7_1 exon 41929290 41929421 41929290 ID=Msa1019800-mRNA-1:exon:8167;Parent=Msa1019800-mRNA-1
chr7_1 exon 41929498 41929767 41929498 ID=Msa1019800-mRNA-1:exon:8168;Parent=Msa1019800-mRNA-1
chr7_1 CDS 41927710 41928942 41927710 ID=Msa1019800-mRNA-1:cds;Parent=Msa1019800-mRNA-1
chr7_1 CDS 41929290 41929421 41929290 ID=Msa1019800-mRNA-1:cds;Parent=Msa1019800-mRNA-1
chr7_1 CDS 41929498 41929767 41929498 ID=Msa1019800-mRNA-1:cds;Parent=Msa1019800-mRNA-1
Gene Sequence

>Msa1019800

ATGGATATCAACAATTACAAAAATATGTTCATGTTCTTGATTTTGACCATGCTGTGTTTTAATATTCTAGATGTTAGTGTTGCCATAGACACCATTACATCAACTCAGTTTATCAAGGACCCTGAAACTCTAAGCTCTAAGAGTGGTAACTTCACCTTAGGCTTTTTTAGTCTTGAAAATTCTACGAATCGCTATGTCGGAATTTGGTGGCAGCCTCAATTCACAATCCTATGGGTGCTTAACAGAGACCAACCTCTCAGAGATTCTTCTGGTGTTGTTAAAATATCTGATAATGGTAATGATCTTGTGGTATTGAATGGAAAGAAAGAGGTGATTTGGACATCCAACGCACCGAATGTTGCAACCAATTCAAGTTCGAAACTTTTAGATTCAGGGAACCTTGTACTACTTGAAGGCATAACAGAAAGAACTATATGGGAGAGTTTCCAGCATCCTTCAAATGTAATGTTGCCAAACATGAAACTTACAAGCAACAAAATAACAGGTGAGAAAGTAAAACAAACATCATGGAAAACACCTTATGATCCATCCATTGGAAGCTTCTCTTTGAGTGTTGAAAGGCTTACTATACCTGAAGTGTTCATATGGAATGAAACTCAACCGTATTGGCGAACTGGTCCGTGGAATGGTAAGATTTTTACAGGGCTTCCATATATGACAACTCATTATCTCGGTGGTTTACATGTTGGTGATGATGGAGAAGGAAATGTTTCATTCTTTCAAATAACATCGGATACAGTTGGTCTCATAATCTATAATCTGAGTTCAGAAGGAAACTGTGAAGAGAAATGGTGGGATGAAAAGAAGAAAGAATGGAAAGTAACATGGAATAGTCATGAAATGGAATGTGATGTTTATGGTGTATGTGGACATTTTGCAAGTTGTAATTCACAAAGCTCACCGATATGTAGCTGTTTGAAAGGGTTTGAGCCAAGGAACAAAGAGGAATGGAATAAACAAAATTGGACTGAAGGGTGTGTTAGGAGGACACCTCTTCAACAGTGTGAAAGATACATAAATCAAAACACAAGTGAAGACAGTAACACTGATGGTTTTTTGAAACTGCCGATGGTCAAAGTTCCCGATTTTGCAGACGGATCATCTCTCACACTATCATCAGAAACATGCAGAAGTCGATGTCTGGAGAATTGCTCTTGTGCTGCATATTCTTATGATGCTGACATTGGTTGTATGTCTTGGACTGGAAACCTAGTGAGTCAGCTCCCAGACGATGATATTCCTATCTTTCATAATTTGACCTACTTGGAGCTCGACAATAGTTGGAATTTTGTAGTACAAATGCTTCACCACTGCCCTATGCTTCAAAATCTCAAACTTTTAGAGTATGTGGCATTGGGGAATGTAGAAGATTGCGTGGAACCAGAATTTGTTCCACAATGTCTTTTATCACACCTTAGAACTTGCACTATTCAGGACAAAGGAGGCCTACAAAGTGAATTTATGCTAGCAAAATATATTTTGAAGAATGCAAAACTTCTACAAACCATGACAATCTCGAGTGAAATTGAACAACATGAACTAGAAAGAAAATTCTCCTCATGCCCGAAGGCCTCTGCAAAATGTCAAATTTTGGTTATTAATAACATCATATAG
Protein sequence

>Msa1019800

MDINNYKNMFMFLILTMLCFNILDVSVAIDTITSTQFIKDPETLSSKSGNFTLGFFSLENSTNRYVGIWWQPQFTILWVLNRDQPLRDSSGVVKISDNGNDLVVLNGKKEVIWTSNAPNVATNSSSKLLDSGNLVLLEGITERTIWESFQHPSNVMLPNMKLTSNKITGEKVKQTSWKTPYDPSIGSFSLSVERLTIPEVFIWNETQPYWRTGPWNGKIFTGLPYMTTHYLGGLHVGDDGEGNVSFFQITSDTVGLIIYNLSSEGNCEEKWWDEKKKEWKVTWNSHEMECDVYGVCGHFASCNSQSSPICSCLKGFEPRNKEEWNKQNWTEGCVRRTPLQQCERYINQNTSEDSNTDGFLKLPMVKVPDFADGSSLTLSSETCRSRCLENCSCAAYSYDADIGCMSWTGNLVSQLPDDDIPIFHNLTYLELDNSWNFVVQMLHHCPMLQNLKLLEYVALGNVEDCVEPEFVPQCLLSHLRTCTIQDKGGLQSEFMLAKYILKNAKLLQTMTISSEIEQHELERKFSSCPKASAKCQILVINNII*