AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1020680

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1020680 MtrunA17_Chr7g0221441 98.678 832 11 0 1 832 1 832 0.0 1721
Msa1020680 MtrunA17_Chr8g0385781 58.486 819 302 6 1 818 1 782 0.0 976
Msa1020680 MtrunA17_Chr3g0131671 58.223 833 302 9 1 825 1 795 0.0 936
Msa1020680 MtrunA17_Chr4g0037651 47.619 819 363 11 3 818 5 760 0.0 738
Msa1020680 MtrunA17_Chr2g0318391 41.259 143 53 3 500 642 14 125 1.94e-25 110
Msa1020680 MtrunA17_Chr8g0360731 41.259 143 53 3 500 642 14 125 1.24e-24 108
Msa1020680 MtrunA17_Chr8g0352731 34.857 175 84 4 513 686 5 150 2.63e-23 98.6
Msa1020680 MtrunA17_Chr6g0481511 37.908 153 59 4 491 637 17 139 9.38e-23 99.0
Msa1020680 MtrunA17_Chr2g0292461 39.535 129 53 4 514 641 30 134 3.98e-19 89.7
Msa1020680 MtrunA17_Chr3g0083541 38.686 137 59 3 505 640 54 166 1.61e-18 89.0
Msa1020680 MtrunA17_Chr8g0380371 68.293 41 13 0 514 554 21 61 5.57e-15 70.5
Msa1020680 MtrunA17_Chr8g0366731 49.254 67 32 1 514 580 22 86 3.71e-14 75.5
Msa1020680 MtrunA17_Chr8g0366741 47.761 67 33 1 514 580 22 86 1.58e-13 73.6
Msa1020680 MtrunA17_Chr1g0182571 45.333 75 39 1 508 582 10 82 1.72e-13 73.9
Msa1020680 MtrunA17_Chr7g0262921 47.826 69 34 1 514 582 16 82 1.72e-12 70.5
Msa1020680 MtrunA17_Chr5g0405451 38.554 83 51 0 739 821 334 416 9.93e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1020680 AT5G13300.1 77.043 832 180 3 1 832 1 821 0.0 1279
Msa1020680 AT5G61980.1 66.626 827 258 9 1 820 1 816 0.0 1085
Msa1020680 AT1G10870.2 44.676 817 397 15 3 818 4 766 0.0 672
Msa1020680 AT1G10870.1 44.798 817 391 16 3 818 4 761 0.0 669
Msa1020680 AT1G60860.1 43.985 823 390 14 3 818 4 762 0.0 662
Msa1020680 AT1G60860.2 42.517 715 340 14 111 818 1 651 0.0 537
Msa1020680 AT1G60860.3 41.140 649 319 13 173 818 3 591 5.13e-153 461
Msa1020680 AT5G54310.1 43.411 129 42 3 514 642 28 125 9.14e-25 109
Msa1020680 AT3G17660.4 35.294 153 63 3 488 640 7 123 2.83e-22 95.5
Msa1020680 AT3G17660.1 36.170 141 59 2 500 640 14 123 7.83e-22 95.5
Msa1020680 AT3G17660.2 35.294 153 63 3 488 640 7 123 1.79e-21 95.1
Msa1020680 AT4G21160.2 42.636 129 49 5 514 641 27 131 9.64e-21 95.1
Msa1020680 AT4G21160.3 42.636 129 49 5 514 641 27 131 9.64e-21 95.1
Msa1020680 AT4G21160.1 42.636 129 49 5 514 641 27 131 9.64e-21 95.1
Msa1020680 AT4G21160.4 42.636 129 49 5 514 641 27 131 9.64e-21 95.1
Msa1020680 AT3G07940.2 40.940 149 59 7 501 645 43 166 5.68e-19 88.2
Msa1020680 AT4G05330.3 39.535 129 53 4 514 641 27 131 2.56e-18 87.8
Msa1020680 AT4G05330.1 39.535 129 53 4 514 641 27 131 2.56e-18 87.8
Msa1020680 AT3G07940.1 40.940 149 59 7 501 645 43 166 3.80e-18 87.8
Msa1020680 AT3G17660.3 30.719 153 60 3 488 640 7 113 1.81e-14 73.9
Msa1020680 AT4G17890.2 45.205 73 38 1 514 586 25 95 2.66e-13 73.2
Msa1020680 AT4G17890.1 45.205 73 38 1 514 586 25 95 2.85e-13 73.2
Msa1020680 AT5G46750.1 45.205 73 38 1 514 586 22 92 5.50e-13 72.4
Msa1020680 AT3G53710.1 48.438 64 31 1 514 577 16 77 9.83e-13 71.6
Msa1020680 AT3G53710.3 48.438 64 31 1 514 577 16 77 9.83e-13 71.6
Msa1020680 AT3G53710.2 48.438 64 31 1 514 577 16 77 9.83e-13 71.6
Msa1020680 AT2G35210.2 39.796 98 51 2 489 586 3 92 1.28e-12 70.9
Msa1020680 AT2G35210.1 48.611 72 31 1 489 560 3 68 1.71e-12 70.5
Msa1020680 AT2G37550.2 48.438 64 31 1 514 577 16 77 2.76e-12 70.5
Msa1020680 AT2G37550.1 48.438 64 31 1 514 577 16 77 2.76e-12 70.5
Msa1020680 AT5G66055.1 47.297 74 39 0 739 812 325 398 8.90e-12 68.6

Find 203 sgRNAs with CRISPR-Local

Find 657 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCGCTGCTGGTTCAAATTTC+TGG 0.132441 7_1:+44427953 None:intergenic
TTCTAATTGCTCTATGAATT+TGG 0.168012 7_1:-44426081 Msa1020680:CDS
GCAATCAAGAAGTGCCTTTC+AGG 0.187884 7_1:-44427027 Msa1020680:CDS
TATACGAAAGTTACCCTTTC+AGG 0.190867 7_1:+44428182 None:intergenic
AATGCGTTCCCTGCCAAATT+AGG 0.193423 7_1:+44426113 None:intergenic
TCTTAATGCTATAGTGAATT+TGG 0.197605 7_1:+44432127 None:intergenic
GAGAGCTGCTTGCTCATAAT+TGG 0.206301 7_1:+44429105 None:intergenic
CAATGATCACGGCCCTAATT+TGG 0.249954 7_1:-44426126 Msa1020680:CDS
AATAGTTCGGAGCTTGGTTC+TGG 0.296829 7_1:-44428556 Msa1020680:CDS
ACTAGTATGAAGAGTTAAAA+AGG 0.299923 7_1:-44425117 Msa1020680:three_prime_UTR
ATTAACAATGTAGCGGTATA+CGG 0.302643 7_1:+44426238 None:intergenic
TACAAAAGCCTACCTCTTCT+AGG 0.303309 7_1:+44429714 None:intergenic
GATTCTGCAGCAAGCTCAAT+AGG 0.316009 7_1:+44425317 None:intergenic
CAGGTTGATCTTGTCCCTAC+AGG 0.324179 7_1:-44427008 Msa1020680:CDS
CTACACTGATGGGGTCATTA+TGG 0.324472 7_1:+44432542 None:intergenic
GACCCCATCAGTGTAGCTTT+TGG 0.325584 7_1:-44432535 Msa1020680:CDS
ATAGTGAATTTGGTCATAAC+AGG 0.328216 7_1:+44432137 None:intergenic
AGTGATGCCCAATCTGGTTC+AGG 0.336427 7_1:+44427852 None:intergenic
GCTCCATCAAATGATTATAA+TGG 0.339590 7_1:-44425269 Msa1020680:CDS
ATAACTTTATTTCAGTCTCT+TGG 0.340949 7_1:-44427086 Msa1020680:CDS
AACAAAGAACTACACTTTGC+AGG 0.344247 7_1:-44428377 Msa1020680:intron
TAATATTTGCGCCATATTGC+AGG 0.345337 7_1:+44425961 None:intergenic
ACTATAGCATTAAGAGAAAT+CGG 0.349793 7_1:-44432119 Msa1020680:CDS
CATCCATTATAATCATTTGA+TGG 0.353462 7_1:+44425266 None:intergenic
CTCTCTTACATTGGACGTTA+AGG 0.354608 7_1:-44427126 Msa1020680:CDS
CCAAGCGTTCGTCAAACTTA+AGG 0.354634 7_1:-44428798 Msa1020680:CDS
GCAAGTGCCCTAGAAACTTT+TGG 0.355212 7_1:-44432571 Msa1020680:CDS
CCACTTCCCATTGGACTTGC+CGG 0.360900 7_1:+44428092 None:intergenic
TGAGCAAACTCGATTTAATC+TGG 0.361409 7_1:-44429593 Msa1020680:intron
ATACGTTTGCCAACTCTGTC+TGG 0.361533 7_1:-44427061 Msa1020680:CDS
TCTTAGTAGCACAACAGATC+TGG 0.365114 7_1:-44426289 Msa1020680:CDS
TGGGCTTCTAATGGTTCTAA+TGG 0.365499 7_1:-44429034 Msa1020680:CDS
GCAAATCAATATTGACAAAC+TGG 0.370026 7_1:+44431385 None:intergenic
ATGCGTTCCCTGCCAAATTA+GGG 0.379799 7_1:+44426114 None:intergenic
TTGCAAGATTGCTACTTTCA+AGG 0.380878 7_1:-44425875 Msa1020680:intron
GAAAACTGTTTGTGGCTTAT+CGG 0.383032 7_1:+44426873 None:intergenic
ACTCTTCGCAACACATCAAT+TGG 0.383417 7_1:+44427909 None:intergenic
GGCTCTAGCAGTCAACATTC+TGG 0.387411 7_1:-44428586 Msa1020680:CDS
AACATTACTAAATTGTTGCT+TGG 0.390803 7_1:+44424979 None:intergenic
TTCTCCCATGTTCCGCAAAC+AGG 0.394746 7_1:-44435155 Msa1020680:intron
GATGTGTTGCGAAGAGTTAT+TGG 0.395797 7_1:-44427903 Msa1020680:CDS
GTGGAGCTCCTCCTGCAATA+TGG 0.396075 7_1:-44425972 Msa1020680:CDS
CTTGTTTGCATTGAATGTTC+CGG 0.396172 7_1:-44427816 Msa1020680:CDS
GGTTCTAATGGATCTCCTAA+TGG 0.402471 7_1:-44429022 Msa1020680:CDS
AGATTTAGTGATGCCCAATC+TGG 0.407169 7_1:+44427846 None:intergenic
TAACTTTATTTCAGTCTCTT+GGG 0.409140 7_1:-44427085 Msa1020680:CDS
CAAGCGTTCGTCAAACTTAA+GGG 0.412490 7_1:-44428797 Msa1020680:CDS
AGTAATGCTATTACAAGAAC+AGG 0.412893 7_1:-44426153 Msa1020680:CDS
TGTTGAAGATGTGATACATT+AGG 0.414458 7_1:-44424926 Msa1020680:three_prime_UTR
AGAATCATATTGACCAGGTT+TGG 0.417148 7_1:+44426846 None:intergenic
ATTCTGCAGCAAGCTCAATA+GGG 0.419208 7_1:+44425318 None:intergenic
ATGGTTTGCTGCATTGTTTA+CGG 0.421371 7_1:+44428719 None:intergenic
ATACCGCTACATTGTTAATT+CGG 0.421557 7_1:-44426234 Msa1020680:CDS
TTCTTGTAATAGCATTACTT+TGG 0.424670 7_1:+44426157 None:intergenic
ATGCTGACCAATCAGATTTG+AGG 0.438644 7_1:-44428423 Msa1020680:CDS
TTACTGGATTATTACTTGGC+AGG 0.444030 7_1:-44424829 Msa1020680:three_prime_UTR
CCAAACCTGTTTGCGGAACA+TGG 0.444352 7_1:+44435150 None:intergenic
ATGTGTTGCGAAGAGTTATT+GGG 0.448370 7_1:-44427902 Msa1020680:CDS
CTTTGATTGTTGATGTAAGC+AGG 0.452904 7_1:+44428449 None:intergenic
CCATTTCTATCAGTTGTTGC+CGG 0.453353 7_1:-44428111 Msa1020680:intron
GTATGAACTATTACATCAAA+TGG 0.454227 7_1:-44429311 Msa1020680:CDS
GTGGGGCCCCTGAACCAGAT+TGG 0.454280 7_1:-44427860 Msa1020680:CDS
TGCAAAGTGTAGTTCTTTGT+TGG 0.456177 7_1:+44428379 None:intergenic
GTAGGTTCGCTCTCTTACAT+TGG 0.459438 7_1:-44427135 Msa1020680:intron
TGGGGCCCCTGAACCAGATT+GGG 0.460177 7_1:-44427859 Msa1020680:CDS
GTGATGCCCAATCTGGTTCA+GGG 0.462999 7_1:+44427853 None:intergenic
TGTATTACTGGATTATTACT+TGG 0.464472 7_1:-44424833 Msa1020680:three_prime_UTR
ACATCTTCGTTACTTCAAAC+AGG 0.464760 7_1:-44429412 Msa1020680:intron
TGTAAAAGAATACCTTTGCC+TGG 0.465933 7_1:+44426800 None:intergenic
TTACTTTCCAGGGAAGGACT+TGG 0.469478 7_1:-44432622 Msa1020680:intron
GCTTGTATACCATCTCCATT+AGG 0.473433 7_1:+44429007 None:intergenic
CAATGGGAAGTGGTCATCTC+AGG 0.473521 7_1:-44428082 Msa1020680:CDS
GAAAGTAGGTGGGCTTCTAA+TGG 0.481638 7_1:-44429043 Msa1020680:CDS
GATCACGGCCCTAATTTGGC+AGG 0.483100 7_1:-44426122 Msa1020680:CDS
CCTTAAGTTTGACGAACGCT+TGG 0.488106 7_1:+44428798 None:intergenic
CAGAGGAATAGTTCGGAGCT+TGG 0.490071 7_1:-44428562 Msa1020680:CDS
GATTGGGCATCACTAAATCT+TGG 0.493255 7_1:-44427843 Msa1020680:CDS
TGGCAGGGAACGCATTGGAC+TGG 0.495152 7_1:-44426106 Msa1020680:CDS
GTTCTGGACTTCTTAGTCGA+TGG 0.495196 7_1:-44428540 Msa1020680:CDS
ACTTCTCTCTCTCAAAGATT+CGG 0.496519 7_1:+44433493 None:intergenic
AAGTTTCTTTCACTGAGAAA+AGG 0.500366 7_1:-44429761 Msa1020680:CDS
AGCAAAACCTCAAATCTGAT+TGG 0.500595 7_1:+44428416 None:intergenic
CCTCCAAAAGCTACACTGAT+GGG 0.501052 7_1:+44432532 None:intergenic
TATAATCATTTGATGGAGCA+TGG 0.505963 7_1:+44425273 None:intergenic
TATCTTATATATAATATACT+TGG 0.506547 7_1:+44425216 None:intergenic
ACACTAATAAGAAAACTCTC+TGG 0.507040 7_1:-44425243 Msa1020680:three_prime_UTR
GTAATAGCATTACTTTGGCA+AGG 0.507209 7_1:+44426162 None:intergenic
GTTGTTGCCGGCAAGTCCAA+TGG 0.509510 7_1:-44428099 Msa1020680:CDS
AATTTCTGGACGTACGCTCC+AGG 0.514396 7_1:+44427967 None:intergenic
ATGATAAATGTGCTGATTGT+GGG 0.515223 7_1:-44427878 Msa1020680:CDS
GGGTTGTAATGTCTGCCCTT+TGG 0.517354 7_1:-44425086 Msa1020680:three_prime_UTR
CTTAGTAGCACAACAGATCT+GGG 0.517392 7_1:-44426288 Msa1020680:CDS
TTTGTGCATCCTATGTACAT+TGG 0.519372 7_1:-44424896 Msa1020680:three_prime_UTR
GGACTTGGAGAGGCATATGA+TGG 0.521668 7_1:-44432607 Msa1020680:CDS
AAGATGTGATACATTAGGCT+AGG 0.521762 7_1:-44424921 Msa1020680:three_prime_UTR
GAGCTCTCAGATTCCTGAAA+GGG 0.521977 7_1:-44428195 Msa1020680:intron
CAAGGAAGTCCTTCGATCAC+AGG 0.522285 7_1:-44432090 Msa1020680:intron
GTGCGCTGGACCAAATGGAT+TGG 0.524874 7_1:-44428253 Msa1020680:CDS
AGAGAGTGCGCTGGACCAAA+TGG 0.525588 7_1:-44428258 Msa1020680:CDS
TACTGGATTATTACTTGGCA+GGG 0.526366 7_1:-44424828 Msa1020680:three_prime_UTR
TTCTGGTCAGAGGAATAGTT+CGG 0.526551 7_1:-44428569 Msa1020680:CDS
CCTCGAGCTGTGGATGAGGA+TGG 0.527146 7_1:-44425347 Msa1020680:CDS
TTCAAAAGAACTACTCTCAC+TGG 0.527595 7_1:+44428055 None:intergenic
AGTCGGTACTGATTGTCCTT+CGG 0.529976 7_1:+44426311 None:intergenic
TGGGGATTATTTACCCTGTA+GGG 0.530167 7_1:+44426994 None:intergenic
AATTGCTCTATGAATTTGGT+GGG 0.530259 7_1:-44426077 Msa1020680:CDS
CTGAGATGACCACTTCCCAT+TGG 0.531493 7_1:+44428083 None:intergenic
TTGAGAATACAACGATGTAA+AGG 0.532368 7_1:+44425912 None:intergenic
AGATGTGATACATTAGGCTA+GGG 0.535612 7_1:-44424920 Msa1020680:three_prime_UTR
GTGGGGATTATTTACCCTGT+AGG 0.542017 7_1:+44426993 None:intergenic
ATGCTCAGCAATCAAGAGAA+AGG 0.542125 7_1:-44429129 Msa1020680:CDS
AATTTGGTGGGTACTAAAGA+AGG 0.543440 7_1:-44426065 Msa1020680:CDS
TTGTTGCCGGCAAGTCCAAT+GGG 0.543876 7_1:-44428098 Msa1020680:CDS
TAATAGCATTACTTTGGCAA+GGG 0.544635 7_1:+44426163 None:intergenic
TACGTTTGCCAACTCTGTCT+GGG 0.545380 7_1:-44427060 Msa1020680:CDS
CTTCGAGATTGACCATCGGC+TGG 0.546237 7_1:+44426042 None:intergenic
TAATTTGGCAGGGAACGCAT+TGG 0.547365 7_1:-44426111 Msa1020680:CDS
ATATGATTCTCTAGCAGTGA+AGG 0.549569 7_1:-44426833 Msa1020680:CDS
GGGAGGCGATCCTCGAGCTG+TGG 0.550478 7_1:-44425357 Msa1020680:CDS
TAATTGCTCTATGAATTTGG+TGG 0.550506 7_1:-44426078 Msa1020680:CDS
TCCGGTGTTCATCGAAACCT+TGG 0.552972 7_1:-44427798 Msa1020680:CDS
TTACATCGTTGTATTCTCAA+AGG 0.553175 7_1:-44425909 Msa1020680:CDS
CTTATGTGAACTTCTACCAA+TGG 0.555656 7_1:+44428985 None:intergenic
TACATTGGACGTTAAGGTGT+GGG 0.556800 7_1:-44427120 Msa1020680:CDS
TGAAATAAAGTTATCACAGA+AGG 0.557098 7_1:+44427095 None:intergenic
ACAAAAGCCTACCTCTTCTA+GGG 0.557197 7_1:+44429715 None:intergenic
AATGATAAATGTGCTGATTG+TGG 0.559781 7_1:-44427879 Msa1020680:CDS
AAGAGAAATCGGGACATACA+AGG 0.560937 7_1:-44432108 Msa1020680:CDS
TATTGATTTGCAAGAAGTCA+AGG 0.561136 7_1:-44431373 Msa1020680:intron
CTATAGCATTAAGAGAAATC+GGG 0.563886 7_1:-44432118 Msa1020680:CDS
ACCTCCAAAAGCTACACTGA+TGG 0.564755 7_1:+44432531 None:intergenic
AATGGATCTCCTAATGGAGA+TGG 0.565937 7_1:-44429016 Msa1020680:CDS
AATGCACCTGGTCATAGATA+AGG 0.569583 7_1:+44430137 None:intergenic
TGTTAAATTGACATAAACCT+AGG 0.570433 7_1:-44435229 Msa1020680:five_prime_UTR
GGAGATGGTATACAAGCCAT+TGG 0.574707 7_1:-44429001 Msa1020680:CDS
AGTGCAGGCAGAGAGTGCGC+TGG 0.574995 7_1:-44428267 Msa1020680:intron
CCGGCAAGTCCAATGGGAAG+TGG 0.575473 7_1:-44428092 Msa1020680:CDS
AGGTTGATCTTGTCCCTACA+GGG 0.575707 7_1:-44427007 Msa1020680:intron
GTAACGAAGATGTGCATCCA+TGG 0.575869 7_1:+44429422 None:intergenic
TTGGTGATGAAAACTGTTTG+TGG 0.577029 7_1:+44426865 None:intergenic
CCTTGGTGTGCACATATCAA+AGG 0.577329 7_1:-44427781 Msa1020680:intron
GCTTGTGAAACTGCAGACAT+TGG 0.580822 7_1:-44425999 Msa1020680:CDS
CAGCCGATGGTCAATCTCGA+AGG 0.583979 7_1:-44426041 Msa1020680:CDS
TGAGTAACCAAACCTGTTTG+CGG 0.587231 7_1:+44435143 None:intergenic
GGAAGCAGTCAGTGGGACCA+TGG 0.589203 7_1:-44429439 Msa1020680:CDS
ATCTTGTACAAGATTACCAA+AGG 0.589586 7_1:+44425070 None:intergenic
ATTAATGCAACTGATTTGAG+AGG 0.591119 7_1:-44425942 Msa1020680:CDS
AGCCAGCCTTATCTATGACC+AGG 0.594107 7_1:-44430143 Msa1020680:intron
GCAGAATGCTGCCAAAGGAA+AGG 0.595017 7_1:-44428945 Msa1020680:intron
TTCTGCAGCAAGCTCAATAG+GGG 0.596919 7_1:+44425319 None:intergenic
AGATTGATCGAGAAAGTAGG+TGG 0.598984 7_1:-44429054 Msa1020680:CDS
AGTGAAGGAAAAGTTCATCC+AGG 0.603171 7_1:-44426818 Msa1020680:CDS
TTGGTCTGAGTCAAGAGCAC+TGG 0.603439 7_1:-44425015 Msa1020680:three_prime_UTR
AAGCGTTCGTCAAACTTAAG+GGG 0.604023 7_1:-44428796 Msa1020680:CDS
GGAAAAGTTCATCCAGGCAA+AGG 0.607228 7_1:-44426812 Msa1020680:intron
CACCCTTCGAGATTGACCAT+CGG 0.607292 7_1:+44426038 None:intergenic
TGATGCCCAATCTGGTTCAG+GGG 0.609198 7_1:+44427854 None:intergenic
TGAGCTCTCAGATTCCTGAA+AGG 0.609711 7_1:-44428196 Msa1020680:CDS
CCATCCTCATCCACAGCTCG+AGG 0.615689 7_1:+44425347 None:intergenic
CACCTGGTCATAGATAAGGC+TGG 0.616998 7_1:+44430141 None:intergenic
GCTAGAGAATCATATTGACC+AGG 0.617472 7_1:+44426841 None:intergenic
TGTAGCTACTGCCCTAGAAG+AGG 0.617795 7_1:-44429726 Msa1020680:intron
AGCCGATGGTCAATCTCGAA+GGG 0.620302 7_1:-44426040 Msa1020680:CDS
AGCGTTCGTCAAACTTAAGG+GGG 0.621606 7_1:-44428795 Msa1020680:CDS
TCTTGTACAAGATTACCAAA+GGG 0.622439 7_1:+44425071 None:intergenic
GCAGTCAACATTCTGGTCAG+AGG 0.624182 7_1:-44428579 Msa1020680:CDS
CAAACCTGTTTGCGGAACAT+GGG 0.624633 7_1:+44435151 None:intergenic
TACTAAAGAAGGCCAGCCGA+TGG 0.624826 7_1:-44426054 Msa1020680:CDS
AATGGAGCCGTACATTAACC+AGG 0.628214 7_1:-44429293 Msa1020680:intron
GAACAGGCAAACAATGATCA+CGG 0.629231 7_1:-44426137 Msa1020680:CDS
TTCCAGGGAAGGACTTGGAG+AGG 0.629726 7_1:-44432617 Msa1020680:intron
GTAATAATCCAGTAATACAA+AGG 0.630092 7_1:+44424837 None:intergenic
TTACATTGGACGTTAAGGTG+TGG 0.632129 7_1:-44427121 Msa1020680:CDS
GTTCACAGTGTGATGAGCAA+CGG 0.632589 7_1:+44428471 None:intergenic
AACTGCAGACATTGGAATGG+TGG 0.635357 7_1:-44425991 Msa1020680:CDS
TATTTGCGCCATATTGCAGG+AGG 0.636613 7_1:+44425964 None:intergenic
AAGAGACAGAGAAACAACGT+TGG 0.636811 7_1:+44435390 None:intergenic
TCTTTGGTGAAACAGATACA+GGG 0.637338 7_1:-44433530 Msa1020680:intron
AAGTTCCTCCCAGACAGAGT+TGG 0.637874 7_1:+44427052 None:intergenic
ATCACGGCCCTAATTTGGCA+GGG 0.637982 7_1:-44426121 Msa1020680:CDS
GTAATGTAAAATGACTGCAT+TGG 0.638084 7_1:-44425034 Msa1020680:three_prime_UTR
GGTGAAACAGATACAGGGCA+TGG 0.643702 7_1:-44433525 Msa1020680:intron
TCTGTTGTGCTACTAAGAGT+CGG 0.644075 7_1:+44426294 None:intergenic
CTCCAAAAGCTACACTGATG+GGG 0.644943 7_1:+44432533 None:intergenic
AATAGTTTACCTGTGATCGA+AGG 0.645214 7_1:+44432081 None:intergenic
TGATAAATGTGCTGATTGTG+GGG 0.646145 7_1:-44427877 Msa1020680:CDS
ACCAAGGTTTCGATGAACAC+CGG 0.647700 7_1:+44427797 None:intergenic
GTAATGCAGAATGCTGCCAA+AGG 0.649977 7_1:-44428950 Msa1020680:CDS
GACAGATTGATCGAGAAAGT+AGG 0.661266 7_1:-44429057 Msa1020680:CDS
TGAAACTGCAGACATTGGAA+TGG 0.673767 7_1:-44425994 Msa1020680:CDS
CATCCGAATTAACAATGTAG+CGG 0.674705 7_1:+44426231 None:intergenic
CCTTTGATATGTGCACACCA+AGG 0.680873 7_1:+44427781 None:intergenic
AGGGACAAGATCAACCTGAA+AGG 0.685935 7_1:+44427013 None:intergenic
AATCTGAGAGCTCAGCAATG+AGG 0.686046 7_1:+44428205 None:intergenic
TCTTTGTTGGTGAAATGATG+CGG 0.687553 7_1:+44428392 None:intergenic
TAGGTTCAGACTATTCGACA+AGG 0.690633 7_1:-44428829 Msa1020680:CDS
GATTGATCGAGAAAGTAGGT+GGG 0.696174 7_1:-44429053 Msa1020680:CDS
GCGTTCGTCAAACTTAAGGG+GGG 0.699525 7_1:-44428794 Msa1020680:CDS
TAGTGAATTTGGTCATAACA+GGG 0.703666 7_1:+44432138 None:intergenic
GTTTGCCAACTCTGTCTGGG+AGG 0.706516 7_1:-44427057 Msa1020680:CDS
GAAACAGATACAGGGCATGG+AGG 0.706928 7_1:-44433522 Msa1020680:intron
TACTTTCTTCAACAGCACAG+TGG 0.722434 7_1:+44428018 None:intergenic
AGTAGCACAACAGATCTGGG+AGG 0.753828 7_1:-44426285 Msa1020680:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTTTAAAAATTAATTT+TGG - chr7_1:44425236-44425255 Msa1020680:three_prime_UTR 0.0%
!! AATATGAATTTACATATATT+TGG + chr7_1:44426155-44426174 None:intergenic 10.0%
!!! TTTTTAGTTAAAACTTAAAA+GGG + chr7_1:44427099-44427118 None:intergenic 10.0%
!!! ATTTTTAGTTAAAACTTAAA+AGG + chr7_1:44427100-44427119 None:intergenic 10.0%
!!! ATATATTATATTTCTATGTT+TGG + chr7_1:44428540-44428559 None:intergenic 10.0%
!! TAATATTAGTAAACATTATT+AGG + chr7_1:44428832-44428851 None:intergenic 10.0%
!! TTCTATAAAAAATAATATCA+TGG - chr7_1:44429215-44429234 Msa1020680:intron 10.0%
!! TCTATAAAAAATAATATCAT+GGG - chr7_1:44429216-44429235 Msa1020680:intron 10.0%
!! TAAGTTTCATAATTTATATA+TGG - chr7_1:44430079-44430098 Msa1020680:intron 10.0%
!!! TTATTTTTCTTTATCATTTT+AGG - chr7_1:44431451-44431470 Msa1020680:intron 10.0%
!!! TTTTTTAATATTAACTTTAG+TGG - chr7_1:44432853-44432872 Msa1020680:intron 10.0%
!! TAAAATATAACAACAATAAT+GGG + chr7_1:44433354-44433373 None:intergenic 10.0%
!! TTAAAATATAACAACAATAA+TGG + chr7_1:44433355-44433374 None:intergenic 10.0%
!! TTAATATATGTGAAAATATA+AGG - chr7_1:44434857-44434876 Msa1020680:intron 10.0%
!! TATCTTATATATAATATACT+TGG + chr7_1:44435086-44435105 None:intergenic 10.0%
!! AAAAAAAAACCTTAAATCAA+GGG + chr7_1:44425358-44425377 None:intergenic 15.0%
!! AAAAAAAAAACCTTAAATCA+AGG + chr7_1:44425359-44425378 None:intergenic 15.0%
!! CTAATAAAATTATTTGTGAA+TGG - chr7_1:44426539-44426558 Msa1020680:intron 15.0%
!!! ATCAATAAATTTTGATAATG+AGG + chr7_1:44426884-44426903 None:intergenic 15.0%
!! ATATTATTTGTTTATCTTTC+AGG - chr7_1:44427335-44427354 Msa1020680:intron 15.0%
!!! TAGCAGTTTTTAATAAAAAA+TGG + chr7_1:44427926-44427945 None:intergenic 15.0%
!!! TCTATTTTAAATGCATTATT+GGG + chr7_1:44428287-44428306 None:intergenic 15.0%
!! AAATTTCTATTAAAGTTTGT+AGG + chr7_1:44429000-44429019 None:intergenic 15.0%
!! TAAGTAAATTAATTCTTCAT+CGG - chr7_1:44429697-44429716 Msa1020680:intron 15.0%
!!! TATATATGGATTTGTTATAA+TGG - chr7_1:44430093-44430112 Msa1020680:intron 15.0%
!! TTAAAAAAATAAATGCTTCA+AGG + chr7_1:44430399-44430418 None:intergenic 15.0%
!!! ATTTTTTAACAATCTTGTTT+TGG - chr7_1:44430440-44430459 Msa1020680:intron 15.0%
!! AAAGATTAAAATAAACCAAT+GGG + chr7_1:44431433-44431452 None:intergenic 15.0%
!! TAAAGATTAAAATAAACCAA+TGG + chr7_1:44431434-44431453 None:intergenic 15.0%
!! ATAACATATACAATGATAAA+GGG + chr7_1:44432563-44432582 None:intergenic 15.0%
!! TATAACATATACAATGATAA+AGG + chr7_1:44432564-44432583 None:intergenic 15.0%
!! TAGTATCAAATAAGATATTT+CGG + chr7_1:44433074-44433093 None:intergenic 15.0%
!! TAGACATTTAAAAAATATGT+TGG + chr7_1:44433840-44433859 None:intergenic 15.0%
!! TTAAGAAGAAAAATTCAAAT+GGG + chr7_1:44434610-44434629 None:intergenic 15.0%
!! TTTAAGAAGAAAAATTCAAA+TGG + chr7_1:44434611-44434630 None:intergenic 15.0%
!!! ATGTTTTTTTGTTTTGTTTA+AGG - chr7_1:44435152-44435171 Msa1020680:intron 15.0%
!!! TCATATTTTCAAACTATGAT+AGG - chr7_1:44425476-44425495 Msa1020680:intron 20.0%
!!! TTAGTGTTTATTTTGTTCTA+AGG - chr7_1:44425574-44425593 Msa1020680:intron 20.0%
!!! TAAGGAAAATTTGAAATTGA+TGG - chr7_1:44425592-44425611 Msa1020680:intron 20.0%
!! TATGTAAATTCATATTTCAC+AGG - chr7_1:44426159-44426178 Msa1020680:CDS 20.0%
!!! ATAACAGCATGTTTTATATA+AGG + chr7_1:44426211-44426230 None:intergenic 20.0%
!! AAATAAAGTGTAAGATAAAC+AGG + chr7_1:44426236-44426255 None:intergenic 20.0%
!!! AGATTTTATTTACCAAAAGT+GGG + chr7_1:44426360-44426379 None:intergenic 20.0%
!!! TAGATTTTATTTACCAAAAG+TGG + chr7_1:44426361-44426380 None:intergenic 20.0%
!! AAATAAAATCTAACACAGAT+AGG - chr7_1:44426369-44426388 Msa1020680:intron 20.0%
!!! AAATAATTTTATTAGCCTAC+AGG + chr7_1:44426534-44426553 None:intergenic 20.0%
!! ATAAAATTATTTGTGAATGG+TGG - chr7_1:44426542-44426561 Msa1020680:intron 20.0%
!! ATAAAATCTCAAACAATTAG+GGG + chr7_1:44426662-44426681 None:intergenic 20.0%
!! CATAAAATCTCAAACAATTA+GGG + chr7_1:44426663-44426682 None:intergenic 20.0%
!! ACATAAAATCTCAAACAATT+AGG + chr7_1:44426664-44426683 None:intergenic 20.0%
!!! AGAAGTTTGAAATTTTACAA+GGG - chr7_1:44426823-44426842 Msa1020680:CDS 20.0%
!! TTAAGAAAGTTAAAACACTA+AGG + chr7_1:44427142-44427161 None:intergenic 20.0%
!! TAAGTAGTTTCAAAATTCAA+AGG + chr7_1:44427175-44427194 None:intergenic 20.0%
!!! CTCTATTTTAAATGCATTAT+TGG + chr7_1:44428288-44428307 None:intergenic 20.0%
!! AAAATAGAGAGAAATTGAAA+AGG - chr7_1:44428299-44428318 Msa1020680:intron 20.0%
!! ATATTTAGCAGTAAACTATT+TGG - chr7_1:44428468-44428487 Msa1020680:CDS 20.0%
!! ATAGAATATGATTACACAAT+AGG - chr7_1:44428580-44428599 Msa1020680:CDS 20.0%
!! AATAAGTTACTAGATAAATG+GGG + chr7_1:44428719-44428738 None:intergenic 20.0%
!! GAATAAGTTACTAGATAAAT+GGG + chr7_1:44428720-44428739 None:intergenic 20.0%
!! AGAATAAGTTACTAGATAAA+TGG + chr7_1:44428721-44428740 None:intergenic 20.0%
!!! TTGTATATTTCTAAAGTAGT+AGG - chr7_1:44429036-44429055 Msa1020680:CDS 20.0%
!!! TTGTTTCTTTGTTTAGATTT+AGG - chr7_1:44429109-44429128 Msa1020680:CDS 20.0%
!!! TGTTTCTTTGTTTAGATTTA+GGG - chr7_1:44429110-44429129 Msa1020680:CDS 20.0%
!! ATAAAAAATAATATCATGGG+TGG - chr7_1:44429219-44429238 Msa1020680:intron 20.0%
!! TGCTAATAGTTTATTAGTAA+AGG + chr7_1:44429650-44429669 None:intergenic 20.0%
!! TAAACATGACACTTAATATT+AGG - chr7_1:44429754-44429773 Msa1020680:CDS 20.0%
!! CAAAACATTGAAGAAATTAT+TGG - chr7_1:44429876-44429895 Msa1020680:intron 20.0%
!! TGGAAGTTTATGTTATATTA+AGG - chr7_1:44431066-44431085 Msa1020680:intron 20.0%
!! GGAAGTTTATGTTATATTAA+GGG - chr7_1:44431067-44431086 Msa1020680:intron 20.0%
!!! AAATTTGTTACAAAGAAACA+TGG + chr7_1:44431658-44431677 None:intergenic 20.0%
!! AATTTCATCTGATATTATTG+TGG - chr7_1:44431673-44431692 Msa1020680:intron 20.0%
!!! TTTTAGTTCATTGTAAAAGT+TGG + chr7_1:44432782-44432801 None:intergenic 20.0%
!! AAAATTATGCATGTTCAAAT+TGG - chr7_1:44432956-44432975 Msa1020680:intron 20.0%
!! AAAAAATATACCAATTGAGA+GGG + chr7_1:44433131-44433150 None:intergenic 20.0%
!! AAAAAAATATACCAATTGAG+AGG + chr7_1:44433132-44433151 None:intergenic 20.0%
!!! TCATAAAAGTAACTTTTTAC+AGG + chr7_1:44433568-44433587 None:intergenic 20.0%
!!! TAACTTTATGTAATGGTTTT+TGG - chr7_1:44434456-44434475 Msa1020680:intron 20.0%
!! AAAAATAAACCAATGTACAT+AGG + chr7_1:44435415-44435434 None:intergenic 20.0%
! TGTTAAATTGACATAAACCT+AGG - chr7_1:44425070-44425089 Msa1020680:three_prime_UTR 25.0%
! TTGTATGTGTAATGAATGTA+AGG - chr7_1:44425261-44425280 Msa1020680:exon 25.0%
! AATGTAAGGTGAATTTCATT+GGG - chr7_1:44425275-44425294 Msa1020680:CDS 25.0%
! TTAAGTTTACCCTTGATTTA+AGG - chr7_1:44425346-44425365 Msa1020680:CDS 25.0%
!! ATTTATGCCTATAGCTTTTA+CGG - chr7_1:44425784-44425803 Msa1020680:intron 25.0%
!! AAATAAGTACTGTCAAATAG+CGG - chr7_1:44425936-44425955 Msa1020680:CDS 25.0%
! CTTTGAACTAAATAACCTAT+CGG + chr7_1:44426000-44426019 None:intergenic 25.0%
!! ACATATATTTGGTTCAGAAT+TGG + chr7_1:44426144-44426163 None:intergenic 25.0%
! ATAAGGATAAGTTCAGTTAT+AGG + chr7_1:44426194-44426213 None:intergenic 25.0%
! TCGTTGAAATGATAAAATCT+TGG - chr7_1:44426293-44426312 Msa1020680:CDS 25.0%
! CGTTGAAATGATAAAATCTT+GGG - chr7_1:44426294-44426313 Msa1020680:CDS 25.0%
! TGTCAGAATATTGTATTTGT+AGG - chr7_1:44426694-44426713 Msa1020680:intron 25.0%
!!! TTGTCTGTCTTTTAATTCTT+TGG - chr7_1:44426753-44426772 Msa1020680:intron 25.0%
!!! GAGAAGTTTGAAATTTTACA+AGG - chr7_1:44426822-44426841 Msa1020680:CDS 25.0%
! AGTTTCAAAATTCAAAGGTT+TGG + chr7_1:44427170-44427189 None:intergenic 25.0%
!!! ATTTATTTTCAACTTCACTG+AGG - chr7_1:44427360-44427379 Msa1020680:intron 25.0%
!! CTTGATTTTTACTCAAGATT+TGG + chr7_1:44427396-44427415 None:intergenic 25.0%
! AATCTTGAGTAAAAATCAAG+AGG - chr7_1:44427396-44427415 Msa1020680:intron 25.0%
!!! AATCAAGAGGTTTTTTTATG+AGG - chr7_1:44427409-44427428 Msa1020680:intron 25.0%
!! AAAATTTTCCTTTCGATGAT+GGG + chr7_1:44427528-44427547 None:intergenic 25.0%
!! TAAAATTTTCCTTTCGATGA+TGG + chr7_1:44427529-44427548 None:intergenic 25.0%
!!! ATCGAAAGGAAAATTTTAGT+GGG - chr7_1:44427531-44427550 Msa1020680:intron 25.0%
! AAAGTAAAATGACAGCATTT+AGG + chr7_1:44427664-44427683 None:intergenic 25.0%
! ATGATGTTGAAGAAAAGAAA+AGG + chr7_1:44427797-44427816 None:intergenic 25.0%
! ATCTATTAAGAAAGACATTG+AGG + chr7_1:44427903-44427922 None:intergenic 25.0%
! ACATCATGATAATCAAATCA+TGG + chr7_1:44428073-44428092 None:intergenic 25.0%
! TCTTAATGCTATAGTGAATT+TGG + chr7_1:44428175-44428194 None:intergenic 25.0%
! ACTATAGCATTAAGAGAAAT+CGG - chr7_1:44428180-44428199 Msa1020680:intron 25.0%
! TCTTCATTCATCCAAAAAAA+AGG - chr7_1:44428352-44428371 Msa1020680:intron 25.0%
! TTCATCCAAAAAAAAGGAAA+AGG - chr7_1:44428358-44428377 Msa1020680:intron 25.0%
! CTAAATATTGTAATGTGGTT+CGG + chr7_1:44428456-44428475 None:intergenic 25.0%
! TACTGCTAAATATTGTAATG+TGG + chr7_1:44428461-44428480 None:intergenic 25.0%
!! TATATTTCTATGTTTGGTAC+CGG + chr7_1:44428534-44428553 None:intergenic 25.0%
! CACATTACTATAATAATTGC+TGG - chr7_1:44428788-44428807 Msa1020680:CDS 25.0%
!!! TTGTTTAGATTTAGGGTTTT+AGG - chr7_1:44429117-44429136 Msa1020680:CDS 25.0%
! TTCTTGTGATCTTAACAAAT+AGG - chr7_1:44429419-44429438 Msa1020680:CDS 25.0%
! GAGAGAATATATTCTGATAT+GGG + chr7_1:44429468-44429487 None:intergenic 25.0%
! AGAGAGAATATATTCTGATA+TGG + chr7_1:44429469-44429488 None:intergenic 25.0%
! AAACTATTAGCAGAATAGTT+AGG - chr7_1:44429658-44429677 Msa1020680:intron 25.0%
!!! TTTTCCATTTCTGAAGTTTT+TGG - chr7_1:44429969-44429988 Msa1020680:intron 25.0%
!!! TTTCCATTTCTGAAGTTTTT+GGG - chr7_1:44429970-44429989 Msa1020680:intron 25.0%
!! TTGATAGTCTATAGAAACTT+TGG + chr7_1:44430003-44430022 None:intergenic 25.0%
! TTCTATAGACTATCAAAACT+AGG - chr7_1:44430007-44430026 Msa1020680:intron 25.0%
! ACACTTACAAAATCTTAACA+TGG + chr7_1:44430043-44430062 None:intergenic 25.0%
!! ATTATAAAGCATTTGGAGAT+AGG + chr7_1:44430188-44430207 None:intergenic 25.0%
!! CGACAAAATTATAAAGCATT+TGG + chr7_1:44430195-44430214 None:intergenic 25.0%
!! CAAATCCAAATTTTAAACTC+AGG + chr7_1:44430236-44430255 None:intergenic 25.0%
!!! TTTTTTAACAATTTACCCCT+TGG - chr7_1:44430411-44430430 Msa1020680:intron 25.0%
! TTAAAAAATCCAATACCAAG+GGG + chr7_1:44430429-44430448 None:intergenic 25.0%
! GTTAAAAAATCCAATACCAA+GGG + chr7_1:44430430-44430449 None:intergenic 25.0%
! TGTTAAAAAATCCAATACCA+AGG + chr7_1:44430431-44430450 None:intergenic 25.0%
!!! TTTGCAGTTTTGAATATTGT+AGG + chr7_1:44430466-44430485 None:intergenic 25.0%
!!! AAAGAAGAGATTTGAGTTTT+TGG - chr7_1:44430839-44430858 Msa1020680:intron 25.0%
! TTTGATTCATTTCACTTGTA+GGG - chr7_1:44430965-44430984 Msa1020680:intron 25.0%
! GTATGAACTATTACATCAAA+TGG - chr7_1:44430988-44431007 Msa1020680:intron 25.0%
!! TTTTAAACCTGGTTAATGTA+CGG + chr7_1:44431016-44431035 None:intergenic 25.0%
!! TTTTAAACCCTTTAATTACG+TGG - chr7_1:44431046-44431065 Msa1020680:intron 25.0%
! TAAACTTCCACGTAATTAAA+GGG + chr7_1:44431056-44431075 None:intergenic 25.0%
! ATAAACTTCCACGTAATTAA+AGG + chr7_1:44431057-44431076 None:intergenic 25.0%
! AGTTTATGTTATATTAAGGG+TGG - chr7_1:44431070-44431089 Msa1020680:intron 25.0%
!! ATCATTTGCATTTTCACTAT+GGG + chr7_1:44431115-44431134 None:intergenic 25.0%
!! AATCATTTGCATTTTCACTA+TGG + chr7_1:44431116-44431135 None:intergenic 25.0%
! GTTTAATGTGAACAATAAGT+TGG - chr7_1:44431612-44431631 Msa1020680:intron 25.0%
!! AATAGTGTTTTATCCGTATA+AGG - chr7_1:44431964-44431983 Msa1020680:intron 25.0%
! CTTTAATCACAATCCTTATA+CGG + chr7_1:44431980-44431999 None:intergenic 25.0%
!!! TTTTTTCAATCCAATCCATT+TGG + chr7_1:44432059-44432078 None:intergenic 25.0%
!!! TGGTTTTTCACTTTTATTAC+AGG + chr7_1:44432373-44432392 None:intergenic 25.0%
! TTTAGTGGTTAAAACTGTAA+TGG - chr7_1:44432868-44432887 Msa1020680:intron 25.0%
! TGTTCAAATTGGTTGTTTAT+AGG - chr7_1:44432967-44432986 Msa1020680:intron 25.0%
! GTTCAAATTGGTTGTTTATA+GGG - chr7_1:44432968-44432987 Msa1020680:intron 25.0%
! TGAAATAAAGTTATCACAGA+AGG + chr7_1:44433207-44433226 None:intergenic 25.0%
!! ATAACTTTATTTCAGTCTCT+TGG - chr7_1:44433213-44433232 Msa1020680:intron 25.0%
!! TAACTTTATTTCAGTCTCTT+GGG - chr7_1:44433214-44433233 Msa1020680:intron 25.0%
! AGTAATGCAAAGATAATAGT+GGG + chr7_1:44433327-44433346 None:intergenic 25.0%
! AAGTAATGCAAAGATAATAG+TGG + chr7_1:44433328-44433347 None:intergenic 25.0%
!!! GTTACTTTTATGATTCTGAT+TGG - chr7_1:44433575-44433594 Msa1020680:intron 25.0%
!!! TATGATTCTGATTGGTTTTT+TGG - chr7_1:44433583-44433602 Msa1020680:intron 25.0%
!!! ATTGGTTTTTTGGAAAATGA+TGG - chr7_1:44433593-44433612 Msa1020680:intron 25.0%
! GAAACTGAAGAAAATGATAT+AGG - chr7_1:44433677-44433696 Msa1020680:intron 25.0%
! TTAAAAAATATGTTGGCAGA+GGG + chr7_1:44433833-44433852 None:intergenic 25.0%
! TTTAAAAAATATGTTGGCAG+AGG + chr7_1:44433834-44433853 None:intergenic 25.0%
!!! TTCTGTTTTTTTAAATCCCT+TGG - chr7_1:44433935-44433954 Msa1020680:intron 25.0%
! TTCTTGTAATAGCATTACTT+TGG + chr7_1:44434145-44434164 None:intergenic 25.0%
! TTCTAATTGCTCTATGAATT+TGG - chr7_1:44434218-44434237 Msa1020680:intron 25.0%
!! TGACCATTTCAAGTATTAAT+GGG - chr7_1:44434523-44434542 Msa1020680:intron 25.0%
! TCAAATGGGACTTATATTTA+GGG + chr7_1:44434596-44434615 None:intergenic 25.0%
! TTCAAATGGGACTTATATTT+AGG + chr7_1:44434597-44434616 None:intergenic 25.0%
! AACACATCTATATACATGAA+AGG - chr7_1:44434731-44434750 Msa1020680:intron 25.0%
! ACACATCTATATACATGAAA+GGG - chr7_1:44434732-44434751 Msa1020680:intron 25.0%
!!! ATATACATGAAAGGGTATTT+TGG - chr7_1:44434740-44434759 Msa1020680:intron 25.0%
! CATCCATTATAATCATTTGA+TGG + chr7_1:44435036-44435055 None:intergenic 25.0%
!!! TTTTTAACTCTTCATACTAG+TGG + chr7_1:44435183-44435202 None:intergenic 25.0%
! ACTAGTATGAAGAGTTAAAA+AGG - chr7_1:44435182-44435201 Msa1020680:exon 25.0%
! AACATTACTAAATTGTTGCT+TGG + chr7_1:44435323-44435342 None:intergenic 25.0%
!!! CATTGGTTTATTTTTGTGAA+AGG - chr7_1:44435420-44435439 Msa1020680:five_prime_UTR 25.0%
!!! TATTTTTGTGAAAGGTTTTG+TGG - chr7_1:44435428-44435447 Msa1020680:five_prime_UTR 25.0%
!!! TTTTTTCACCTTTGTATTAC+TGG - chr7_1:44435454-44435473 Msa1020680:five_prime_UTR 25.0%
! GTAATAATCCAGTAATACAA+AGG + chr7_1:44435465-44435484 None:intergenic 25.0%
! TGTATTACTGGATTATTACT+TGG - chr7_1:44435466-44435485 Msa1020680:five_prime_UTR 25.0%
!!! ACTTTCACTGGTTTTGAATT+TGG + chr7_1:44424984-44425003 None:intergenic 30.0%
!!! TTCACTTTTTTCACTTTCAC+TGG + chr7_1:44424996-44425015 None:intergenic 30.0%
CACAAAAAACGATAATTCCT+AGG + chr7_1:44425090-44425109 None:intergenic 30.0%
!!! CTAGGAATTATCGTTTTTTG+TGG - chr7_1:44425088-44425107 Msa1020680:three_prime_UTR 30.0%
GAATGTAAGGTGAATTTCAT+TGG - chr7_1:44425274-44425293 Msa1020680:CDS 30.0%
! ATTGATGGCTTGATGATAAA+TGG - chr7_1:44425607-44425626 Msa1020680:intron 30.0%
AAAGTAACCGTAAAAGCTAT+AGG + chr7_1:44425794-44425813 None:intergenic 30.0%
! TACTTATTTCTCCTTGTTCA+GGG + chr7_1:44425925-44425944 None:intergenic 30.0%
! TATTTGGTTCAGAATTGGAA+GGG + chr7_1:44426139-44426158 None:intergenic 30.0%
! ATATTTGGTTCAGAATTGGA+AGG + chr7_1:44426140-44426159 None:intergenic 30.0%
!! AGCAGTATTTTTGCAGTTTA+GGG + chr7_1:44426260-44426279 None:intergenic 30.0%
!! AAGCAGTATTTTTGCAGTTT+AGG + chr7_1:44426261-44426280 None:intergenic 30.0%
!! TTTTGAAGATTATTCCTTGC+TGG - chr7_1:44426486-44426505 Msa1020680:intron 30.0%
TGGTAGAACAATATGATAAC+TGG - chr7_1:44426506-44426525 Msa1020680:intron 30.0%
! TAAATAGCCATGAACTTTTG+TGG - chr7_1:44426903-44426922 Msa1020680:intron 30.0%
AAACTTCAATTTGCATGACA+TGG + chr7_1:44426935-44426954 None:intergenic 30.0%
! TATGCTATCTTTTCAACTGT+TGG - chr7_1:44426995-44427014 Msa1020680:intron 30.0%
!!! GGAAAGAATTTTGGAATTTG+TGG + chr7_1:44427295-44427314 None:intergenic 30.0%
! CATCTGAAAGGAAAGAATTT+TGG + chr7_1:44427304-44427323 None:intergenic 30.0%
! AAAGCATTAATACTGCTTAG+TGG - chr7_1:44427439-44427458 Msa1020680:intron 30.0%
TTTGTGTATTCTATTCTCCA+TGG - chr7_1:44427463-44427482 Msa1020680:intron 30.0%
! CATCGAAAGGAAAATTTTAG+TGG - chr7_1:44427530-44427549 Msa1020680:intron 30.0%
!!! GGAAAATTTTAGTGGGTTAA+TGG - chr7_1:44427538-44427557 Msa1020680:intron 30.0%
ATGCTTAAGATGGTTAATGA+AGG - chr7_1:44427815-44427834 Msa1020680:CDS 30.0%
TGCTTAAGATGGTTAATGAA+GGG - chr7_1:44427816-44427835 Msa1020680:CDS 30.0%
TTGACTAATGTTATCTGTCA+AGG - chr7_1:44427973-44427992 Msa1020680:CDS 30.0%
TAGTGAATTTGGTCATAACA+GGG + chr7_1:44428164-44428183 None:intergenic 30.0%
ATAGTGAATTTGGTCATAAC+AGG + chr7_1:44428165-44428184 None:intergenic 30.0%
CTATAGCATTAAGAGAAATC+GGG - chr7_1:44428181-44428200 Msa1020680:intron 30.0%
AATGAAGAATAGAGAGTGAT+TGG + chr7_1:44428340-44428359 None:intergenic 30.0%
! GACTACCTTTTCCTTTTTTT+TGG + chr7_1:44428366-44428385 None:intergenic 30.0%
ACTGTCAAAGCATAATACTT+AGG - chr7_1:44428428-44428447 Msa1020680:CDS 30.0%
CTGTCAAAGCATAATACTTA+GGG - chr7_1:44428429-44428448 Msa1020680:CDS 30.0%
TGTCAAAGCATAATACTTAG+GGG - chr7_1:44428430-44428449 Msa1020680:CDS 30.0%
! TTTGGAAATGGATATTGGTT+GGG + chr7_1:44428666-44428685 None:intergenic 30.0%
TTTCGTTTGGAAATGGATAT+TGG + chr7_1:44428671-44428690 None:intergenic 30.0%
ATGTGCAAGAGTTATGTATT+AGG + chr7_1:44428773-44428792 None:intergenic 30.0%
AAGAAAGCAAACTATGTGTT+AGG + chr7_1:44428857-44428876 None:intergenic 30.0%
GCAAATCAATATTGACAAAC+TGG + chr7_1:44428917-44428936 None:intergenic 30.0%
!! TATTGATTTGCAAGAAGTCA+AGG - chr7_1:44428926-44428945 Msa1020680:intron 30.0%
TATATTATCCCAACAGCTAT+TGG - chr7_1:44429276-44429295 Msa1020680:intron 30.0%
ATATTATCCCAACAGCTATT+GGG - chr7_1:44429277-44429296 Msa1020680:intron 30.0%
! CAACAAAGCTCATTTTATGA+TGG + chr7_1:44429617-44429636 None:intergenic 30.0%
TATTAGCAGAATAGTTAGGA+GGG - chr7_1:44429662-44429681 Msa1020680:intron 30.0%
!! GATGTATTTGAGAAGTATCA+AGG - chr7_1:44429842-44429861 Msa1020680:intron 30.0%
! TTCCTCCTGAGTTTAAAATT+TGG - chr7_1:44430228-44430247 Msa1020680:intron 30.0%
! ATCCAAATTTTAAACTCAGG+AGG + chr7_1:44430233-44430252 None:intergenic 30.0%
GGCAATCATTAGAGAAAAAA+CGG + chr7_1:44430490-44430509 None:intergenic 30.0%
AAGTTTCTTTCACTGAGAAA+AGG - chr7_1:44430538-44430557 Msa1020680:intron 30.0%
! ACATGTTTTGTGCATGATAT+AGG - chr7_1:44430658-44430677 Msa1020680:intron 30.0%
! GAGACTCTTCAAGTTTATTT+GGG + chr7_1:44430786-44430805 None:intergenic 30.0%
! AGAGACTCTTCAAGTTTATT+TGG + chr7_1:44430787-44430806 None:intergenic 30.0%
AATGTTGTGACAAAGACTAT+GGG + chr7_1:44430939-44430958 None:intergenic 30.0%
CTTTGATTCATTTCACTTGT+AGG - chr7_1:44430964-44430983 Msa1020680:intron 30.0%
TTGATTCATTTCACTTGTAG+GGG - chr7_1:44430966-44430985 Msa1020680:intron 30.0%
AGACCTGCAAAATAATTAAC+CGG + chr7_1:44431144-44431163 None:intergenic 30.0%
!! GTTATTTTACTTTCTCCCAT+TGG - chr7_1:44431415-44431434 Msa1020680:CDS 30.0%
!! GATTTTTCGTTCTTGATAGT+CGG - chr7_1:44431540-44431559 Msa1020680:intron 30.0%
!! ATTTTTCGTTCTTGATAGTC+GGG - chr7_1:44431541-44431560 Msa1020680:intron 30.0%
CACATTAAACTTCTTACAGA+TGG + chr7_1:44431602-44431621 None:intergenic 30.0%
TTTGTTACAAAGAAACATGG+CGG + chr7_1:44431655-44431674 None:intergenic 30.0%
GATTGGATTGAAAAAATCAC+AGG - chr7_1:44432063-44432082 Msa1020680:intron 30.0%
CTGACTAATTCATTGTTGTA+TGG + chr7_1:44432153-44432172 None:intergenic 30.0%
!! AATGATAAATGTGCTGATTG+TGG - chr7_1:44432420-44432439 Msa1020680:intron 30.0%
!! ATGATAAATGTGCTGATTGT+GGG - chr7_1:44432421-44432440 Msa1020680:intron 30.0%
ACATGTGAATATCATTTGTG+AGG - chr7_1:44432602-44432621 Msa1020680:CDS 30.0%
GTTAAGACAAGATACATACA+TGG + chr7_1:44432691-44432710 None:intergenic 30.0%
TGTATGTATCTTGTCTTAAC+TGG - chr7_1:44432691-44432710 Msa1020680:intron 30.0%
GTATGTATCTTGTCTTAACT+GGG - chr7_1:44432692-44432711 Msa1020680:intron 30.0%
TATGTATCTTGTCTTAACTG+GGG - chr7_1:44432693-44432712 Msa1020680:intron 30.0%
!!! TTTTTTCTCCATTCTGTTGT+AGG - chr7_1:44433146-44433165 Msa1020680:intron 30.0%
GTAATGCAAAGATAATAGTG+GGG + chr7_1:44433326-44433345 None:intergenic 30.0%
ATGTGTATATCAGGAATACT+TGG + chr7_1:44433378-44433397 None:intergenic 30.0%
TTAGCGAAAATGTGTATATC+AGG + chr7_1:44433387-44433406 None:intergenic 30.0%
TTTACATAAGCTCTTGCTAA+TGG - chr7_1:44433516-44433535 Msa1020680:CDS 30.0%
TGTTGATGTTACACTGAAAA+TGG - chr7_1:44433893-44433912 Msa1020680:intron 30.0%
AAAAACAGAAATATGACTCG+TGG + chr7_1:44433925-44433944 None:intergenic 30.0%
ATTAACAATGTAGCGGTATA+CGG + chr7_1:44434064-44434083 None:intergenic 30.0%
ATACCGCTACATTGTTAATT+CGG - chr7_1:44434065-44434084 Msa1020680:intron 30.0%
TAATAGCATTACTTTGGCAA+GGG + chr7_1:44434139-44434158 None:intergenic 30.0%
AGTAATGCTATTACAAGAAC+AGG - chr7_1:44434146-44434165 Msa1020680:intron 30.0%
TAATTGCTCTATGAATTTGG+TGG - chr7_1:44434221-44434240 Msa1020680:intron 30.0%
AATTGCTCTATGAATTTGGT+GGG - chr7_1:44434222-44434241 Msa1020680:intron 30.0%
!! ATTAATGCAACTGATTTGAG+AGG - chr7_1:44434357-44434376 Msa1020680:intron 30.0%
TTGAGAATACAACGATGTAA+AGG + chr7_1:44434390-44434409 None:intergenic 30.0%
TTACATCGTTGTATTCTCAA+AGG - chr7_1:44434390-44434409 Msa1020680:intron 30.0%
AGTGTGGTAACTTTATGTAA+TGG - chr7_1:44434449-44434468 Msa1020680:intron 30.0%
! GTGACCATTTCAAGTATTAA+TGG - chr7_1:44434522-44434541 Msa1020680:intron 30.0%
TAGCCCATTAATACTTGAAA+TGG + chr7_1:44434529-44434548 None:intergenic 30.0%
CACTTTGTAGCATTAATTAG+AGG + chr7_1:44434685-44434704 None:intergenic 30.0%
! ATTAATGCTACAAAGTGTCT+TGG - chr7_1:44434688-44434707 Msa1020680:intron 30.0%
AATATAAGGAGTTCTATCCA+TGG - chr7_1:44434871-44434890 Msa1020680:intron 30.0%
! TTTTCACAATTCATGAACCA+TGG + chr7_1:44434891-44434910 None:intergenic 30.0%
TATAATCATTTGATGGAGCA+TGG + chr7_1:44435029-44435048 None:intergenic 30.0%
GCTCCATCAAATGATTATAA+TGG - chr7_1:44435030-44435049 Msa1020680:intron 30.0%
ACACTAATAAGAAAACTCTC+TGG - chr7_1:44435056-44435075 Msa1020680:intron 30.0%
TCTTGTACAAGATTACCAAA+GGG + chr7_1:44435231-44435250 None:intergenic 30.0%
ATCTTGTACAAGATTACCAA+AGG + chr7_1:44435232-44435251 None:intergenic 30.0%
GTAATGTAAAATGACTGCAT+TGG - chr7_1:44435265-44435284 Msa1020680:five_prime_UTR 30.0%
TGTTGAAGATGTGATACATT+AGG - chr7_1:44435373-44435392 Msa1020680:five_prime_UTR 30.0%
TAAGGTGAATTTCATTGGGT+AGG - chr7_1:44425279-44425298 Msa1020680:CDS 35.0%
AAGGTGAATTTCATTGGGTA+GGG - chr7_1:44425280-44425299 Msa1020680:CDS 35.0%
!! ATTGATGTGTTGGTGATAGT+TGG - chr7_1:44425309-44425328 Msa1020680:CDS 35.0%
TTCAACCTAATCACATGTGT+CGG + chr7_1:44425451-44425470 None:intergenic 35.0%
ACTGACATATACAAGAACAC+CGG + chr7_1:44425540-44425559 None:intergenic 35.0%
TTGTATATGTCAGTGTTTCG+TGG - chr7_1:44425546-44425565 Msa1020680:intron 35.0%
TGTATATGTCAGTGTTTCGT+GGG - chr7_1:44425547-44425566 Msa1020680:intron 35.0%
! CACTAAAGTACTTTGCATAG+CGG - chr7_1:44425672-44425691 Msa1020680:intron 35.0%
TGATCTGCAAATGATAACAC+TGG - chr7_1:44425720-44425739 Msa1020680:intron 35.0%
GATCTGCAAATGATAACACT+GGG - chr7_1:44425721-44425740 Msa1020680:intron 35.0%
TCATAGACTGAGATTTAGAC+AGG - chr7_1:44425856-44425875 Msa1020680:intron 35.0%
CATAGACTGAGATTTAGACA+GGG - chr7_1:44425857-44425876 Msa1020680:intron 35.0%
! GTACTTATTTCTCCTTGTTC+AGG + chr7_1:44425926-44425945 None:intergenic 35.0%
! ATTGGAAGGGTGGATATTTT+GGG + chr7_1:44426126-44426145 None:intergenic 35.0%
! AATTGGAAGGGTGGATATTT+TGG + chr7_1:44426127-44426146 None:intergenic 35.0%
! AAGCAATGTTATCCCACTTT+TGG - chr7_1:44426345-44426364 Msa1020680:intron 35.0%
TCAAAATAACCGAACTGACT+TGG + chr7_1:44426397-44426416 None:intergenic 35.0%
GCATGATTTAACGAAGAAAC+AGG + chr7_1:44426438-44426457 None:intergenic 35.0%
GTTTCTTCGTTAAATCATGC+TGG - chr7_1:44426438-44426457 Msa1020680:intron 35.0%
ATCATATTGTTCTACCAGCA+AGG + chr7_1:44426503-44426522 None:intergenic 35.0%
ATATGATAACTGGAACCTGT+AGG - chr7_1:44426516-44426535 Msa1020680:intron 35.0%
TGGTGGTTAGAGCTAATTAT+TGG - chr7_1:44426559-44426578 Msa1020680:intron 35.0%
AAGATCAGCATCTATGTTGA+AGG + chr7_1:44426628-44426647 None:intergenic 35.0%
TTCTTTGGTGAAACAGATAC+AGG - chr7_1:44426768-44426787 Msa1020680:intron 35.0%
TCTTTGGTGAAACAGATACA+GGG - chr7_1:44426769-44426788 Msa1020680:intron 35.0%
ACTTCTCTCTCTCAAAGATT+CGG + chr7_1:44426809-44426828 None:intergenic 35.0%
TAGCATAGCATAGAGAGTAA+AGG + chr7_1:44426982-44427001 None:intergenic 35.0%
CCTTAAATAAGTTGCAGCAT+CGG + chr7_1:44427047-44427066 None:intergenic 35.0%
AACTTATGATCACCTCAATG+TGG + chr7_1:44427245-44427264 None:intergenic 35.0%
TGTATTCTATTCTCCATGGA+GGG - chr7_1:44427467-44427486 Msa1020680:intron 35.0%
AATCATTTCCCATCATCGAA+AGG - chr7_1:44427517-44427536 Msa1020680:intron 35.0%
!!! ATGCTGTCATTTTACTTTCC+AGG - chr7_1:44427666-44427685 Msa1020680:intron 35.0%
!!! TGCTGTCATTTTACTTTCCA+GGG - chr7_1:44427667-44427686 Msa1020680:intron 35.0%
CTTCAACATCATGCTTAAGA+TGG - chr7_1:44427805-44427824 Msa1020680:CDS 35.0%
! AAGTAATATTGACTATGCGC+AGG + chr7_1:44427877-44427896 None:intergenic 35.0%
ATCAGAAATTGTTTCACCGT+TGG + chr7_1:44428118-44428137 None:intergenic 35.0%
TGAGTTTCTAACTTCACTGT+AGG - chr7_1:44428138-44428157 Msa1020680:intron 35.0%
AATAGTTTACCTGTGATCGA+AGG + chr7_1:44428221-44428240 None:intergenic 35.0%
AATGCATTATTGGGAGTCAT+TGG + chr7_1:44428278-44428297 None:intergenic 35.0%
ACTATGTCAACAAAATAGCC+AGG + chr7_1:44428503-44428522 None:intergenic 35.0%
GTTGACATAGTGATAGAAAC+CGG - chr7_1:44428512-44428531 Msa1020680:CDS 35.0%
GTTTGGAAATGGATATTGGT+TGG + chr7_1:44428667-44428686 None:intergenic 35.0%
TAGATAAATGGGGAATCTGA+AGG + chr7_1:44428709-44428728 None:intergenic 35.0%
TAGGAAGCAGTTATGTTTCT+AGG + chr7_1:44428754-44428773 None:intergenic 35.0%
!! TAGTTTGCTTTCTTCCTTTC+AGG - chr7_1:44428863-44428882 Msa1020680:intron 35.0%
CATCTTAATGACAGGGTAAT+AGG + chr7_1:44428977-44428996 None:intergenic 35.0%
TTGTAGGCATCTTAATGACA+GGG + chr7_1:44428984-44429003 None:intergenic 35.0%
TTTGTAGGCATCTTAATGAC+AGG + chr7_1:44428985-44429004 None:intergenic 35.0%
CTATACAGAGCAAAGTGATT+TGG + chr7_1:44429066-44429085 None:intergenic 35.0%
TGCTCTGTATAGAATCTACT+TGG - chr7_1:44429074-44429093 Msa1020680:CDS 35.0%
!!! TAGGGTTTTAGGATTCAAGT+AGG - chr7_1:44429128-44429147 Msa1020680:CDS 35.0%
GGATTCAAGTAGGAATTCTT+TGG - chr7_1:44429138-44429157 Msa1020680:CDS 35.0%
AATATATTCTGATATGGGCG+TGG + chr7_1:44429463-44429482 None:intergenic 35.0%
CTATTAGCAGAATAGTTAGG+AGG - chr7_1:44429661-44429680 Msa1020680:intron 35.0%
TGACACTTAATATTAGGCAG+AGG - chr7_1:44429760-44429779 Msa1020680:CDS 35.0%
GACACTTAATATTAGGCAGA+GGG - chr7_1:44429761-44429780 Msa1020680:CDS 35.0%
AAGCCCAAAAACTTCAGAAA+TGG + chr7_1:44429976-44429995 None:intergenic 35.0%
!! TGTTTCTTTAGAGCAGATCT+GGG + chr7_1:44430362-44430381 None:intergenic 35.0%
AACAATTTACCCCTTGGTAT+TGG - chr7_1:44430417-44430436 Msa1020680:intron 35.0%
GTCTGCAAGAGTAACAAATT+TGG + chr7_1:44430511-44430530 None:intergenic 35.0%
! AATTTCAGCTGACTCAACAA+GGG + chr7_1:44430616-44430635 None:intergenic 35.0%
TGAGCAAACTCGATTTAATC+TGG - chr7_1:44430706-44430725 Msa1020680:intron 35.0%
ACATCTTCGTTACTTCAAAC+AGG - chr7_1:44430887-44430906 Msa1020680:intron 35.0%
GAATGTTGTGACAAAGACTA+TGG + chr7_1:44430940-44430959 None:intergenic 35.0%
!! AGCAAAGCTGATTTTAAACC+TGG + chr7_1:44431027-44431046 None:intergenic 35.0%
AAATGCAAATGATTCACTGC+CGG - chr7_1:44431122-44431141 Msa1020680:intron 35.0%
CTTATGTGAACTTCTACCAA+TGG + chr7_1:44431317-44431336 None:intergenic 35.0%
! TCTCTTTTCAACCTTTCCTT+TGG + chr7_1:44431368-44431387 None:intergenic 35.0%
!! TTTTTCGTTCTTGATAGTCG+GGG - chr7_1:44431542-44431561 Msa1020680:intron 35.0%
!! ATGGTTTGCTGCATTGTTTA+CGG + chr7_1:44431583-44431602 None:intergenic 35.0%
TCTTCTCATCATCATCATCA+TGG - chr7_1:44431785-44431804 Msa1020680:intron 35.0%
CTTTGATTGTTGATGTAAGC+AGG + chr7_1:44431853-44431872 None:intergenic 35.0%
AGCAAAACCTCAAATCTGAT+TGG + chr7_1:44431886-44431905 None:intergenic 35.0%
! TCTTTGTTGGTGAAATGATG+CGG + chr7_1:44431910-44431929 None:intergenic 35.0%
TGCAAAGTGTAGTTCTTTGT+TGG + chr7_1:44431923-44431942 None:intergenic 35.0%
AACAAAGAACTACACTTTGC+AGG - chr7_1:44431922-44431941 Msa1020680:intron 35.0%
! TGCACTGACAAGCATAATTA+AGG + chr7_1:44432018-44432037 None:intergenic 35.0%
TTAATTATGCTTGTCAGTGC+AGG - chr7_1:44432017-44432036 Msa1020680:intron 35.0%
TATACGAAAGTTACCCTTTC+AGG + chr7_1:44432120-44432139 None:intergenic 35.0%
TTCAAAAGAACTACTCTCAC+TGG + chr7_1:44432247-44432266 None:intergenic 35.0%
ATGTGTTGCGAAGAGTTATT+GGG - chr7_1:44432397-44432416 Msa1020680:intron 35.0%
!! TGATAAATGTGCTGATTGTG+GGG - chr7_1:44432422-44432441 Msa1020680:intron 35.0%
CTTGTTTGCATTGAATGTTC+CGG - chr7_1:44432483-44432502 Msa1020680:intron 35.0%
! ATAAAGGGTGTGCATTTGTA+TGG + chr7_1:44432548-44432567 None:intergenic 35.0%
CAGACGAGAAATAAAGAACA+GGG + chr7_1:44432728-44432747 None:intergenic 35.0%
TTAATTCCTTCCCTCTCAAT+TGG - chr7_1:44433118-44433137 Msa1020680:intron 35.0%
AATATACCAATTGAGAGGGA+AGG + chr7_1:44433127-44433146 None:intergenic 35.0%
GAAAACTGTTTGTGGCTTAT+CGG + chr7_1:44433429-44433448 None:intergenic 35.0%
!! TTGGTGATGAAAACTGTTTG+TGG + chr7_1:44433437-44433456 None:intergenic 35.0%
AGAATCATATTGACCAGGTT+TGG + chr7_1:44433456-44433475 None:intergenic 35.0%
ATATGATTCTCTAGCAGTGA+AGG - chr7_1:44433466-44433485 Msa1020680:CDS 35.0%
TGTAAAAGAATACCTTTGCC+TGG + chr7_1:44433502-44433521 None:intergenic 35.0%
! TTGGAAAATGATGGAGAATG+AGG - chr7_1:44433602-44433621 Msa1020680:intron 35.0%
! AAAATGATGGAGAATGAGGA+AGG - chr7_1:44433606-44433625 Msa1020680:intron 35.0%
CTATTGTCAGAAACAGATTG+AGG - chr7_1:44433655-44433674 Msa1020680:intron 35.0%
ATCTATTTCATGTGATGCCT+AGG + chr7_1:44433718-44433737 None:intergenic 35.0%
! GACCAAGTTGAAAACAAGAA+GGG + chr7_1:44433771-44433790 None:intergenic 35.0%
! AGACCAAGTTGAAAACAAGA+AGG + chr7_1:44433772-44433791 None:intergenic 35.0%
!!! TTCTTGTTTTCAACTTGGTC+TGG - chr7_1:44433771-44433790 Msa1020680:intron 35.0%
CATCCGAATTAACAATGTAG+CGG + chr7_1:44434071-44434090 None:intergenic 35.0%
GTAATAGCATTACTTTGGCA+AGG + chr7_1:44434140-44434159 None:intergenic 35.0%
! AATTTGGTGGGTACTAAAGA+AGG - chr7_1:44434234-44434253 Msa1020680:intron 35.0%
TAATATTTGCGCCATATTGC+AGG + chr7_1:44434341-44434360 None:intergenic 35.0%
!! TTGCAAGATTGCTACTTTCA+AGG - chr7_1:44434424-44434443 Msa1020680:intron 35.0%
! TCTGAAATCTGTAACTATGC+AGG - chr7_1:44434920-44434939 Msa1020680:intron 35.0%
CTGAAATCTGTAACTATGCA+GGG - chr7_1:44434921-44434940 Msa1020680:intron 35.0%
TGAAATCTGTAACTATGCAG+GGG - chr7_1:44434922-44434941 Msa1020680:intron 35.0%
TGAAGAGTTAAAAAGGAGTG+TGG - chr7_1:44435189-44435208 Msa1020680:exon 35.0%
AAGATGTGATACATTAGGCT+AGG - chr7_1:44435378-44435397 Msa1020680:five_prime_UTR 35.0%
AGATGTGATACATTAGGCTA+GGG - chr7_1:44435379-44435398 Msa1020680:five_prime_UTR 35.0%
TTTGTGCATCCTATGTACAT+TGG - chr7_1:44435403-44435422 Msa1020680:five_prime_UTR 35.0%
TTACTGGATTATTACTTGGC+AGG - chr7_1:44435470-44435489 Msa1020680:five_prime_UTR 35.0%
TACTGGATTATTACTTGGCA+GGG - chr7_1:44435471-44435490 Msa1020680:five_prime_UTR 35.0%
AAGAGACAGAGAAACAACGT+TGG + chr7_1:44424912-44424931 None:intergenic 40.0%
! TCTTTTTCTCTTTCCTCGCT+AGG - chr7_1:44424934-44424953 Msa1020680:three_prime_UTR 40.0%
! CTTTTTCTCTTTCCTCGCTA+GGG - chr7_1:44424935-44424954 Msa1020680:three_prime_UTR 40.0%
AAAAAACAGAAACCCTAGCG+AGG + chr7_1:44424950-44424969 None:intergenic 40.0%
!!! CGCTAGGGTTTCTGTTTTTT+AGG - chr7_1:44424950-44424969 Msa1020680:three_prime_UTR 40.0%
TGAGTAACCAAACCTGTTTG+CGG + chr7_1:44425159-44425178 None:intergenic 40.0%
TCTGTGTTGTGTGTTGTATC+CGG - chr7_1:44425518-44425537 Msa1020680:intron 40.0%
TTCAGGGTTTAATCCAGGTT+GGG + chr7_1:44425909-44425928 None:intergenic 40.0%
AACTGCTATTGTTCTCCGAT+AGG - chr7_1:44425982-44426001 Msa1020680:CDS 40.0%
!! TTCAAAGTGTTGTCACGTAG+CGG - chr7_1:44426013-44426032 Msa1020680:CDS 40.0%
TGCAATTGTTCGACAACACA+GGG - chr7_1:44426083-44426102 Msa1020680:CDS 40.0%
CATTTCAACGAAGATGCATC+AGG + chr7_1:44426284-44426303 None:intergenic 40.0%
ATCAGCATCTATGTTGAAGG+TGG + chr7_1:44426625-44426644 None:intergenic 40.0%
GATGCTTCCACAAAAGTTCA+TGG + chr7_1:44426913-44426932 None:intergenic 40.0%
CCGATGCTGCAACTTATTTA+AGG - chr7_1:44427044-44427063 Msa1020680:CDS 40.0%
GAGTTTCTGTTTCCACATTG+AGG - chr7_1:44427230-44427249 Msa1020680:intron 40.0%
TACTGTACGATGCATCTGAA+AGG + chr7_1:44427316-44427335 None:intergenic 40.0%
GTGTATTCTATTCTCCATGG+AGG - chr7_1:44427466-44427485 Msa1020680:intron 40.0%
!! GTCATTTTACTTTCCAGGGA+AGG - chr7_1:44427671-44427690 Msa1020680:intron 40.0%
TTCCCCTATAATCTTGCCAA+CGG - chr7_1:44428099-44428118 Msa1020680:CDS 40.0%
TCACCGTTGGCAAGATTATA+GGG + chr7_1:44428105-44428124 None:intergenic 40.0%
TTCACCGTTGGCAAGATTAT+AGG + chr7_1:44428106-44428125 None:intergenic 40.0%
AAGAGAAATCGGGACATACA+AGG - chr7_1:44428191-44428210 Msa1020680:intron 40.0%
ATTGGGAGTCATTGGAAACT+AGG + chr7_1:44428270-44428289 None:intergenic 40.0%
GAAGAATAGAGAGTGATTGG+AGG + chr7_1:44428337-44428356 None:intergenic 40.0%
! ACTATTTGGAACTATCGTCC+TGG - chr7_1:44428482-44428501 Msa1020680:CDS 40.0%
GATTACACAATAGGTTCCCA+AGG - chr7_1:44428589-44428608 Msa1020680:CDS 40.0%
CAAGCTCTCTAATTCTTGGA+GGG + chr7_1:44428637-44428656 None:intergenic 40.0%
AGACCAAGCTCTCTAATTCT+TGG + chr7_1:44428641-44428660 None:intergenic 40.0%
!! AGAGGCATTTCGTTTGGAAA+TGG + chr7_1:44428678-44428697 None:intergenic 40.0%
TAACATGTGCTCAACCTGAA+AGG + chr7_1:44428880-44428899 None:intergenic 40.0%
TGGAACATATACTTCCCTTG+TGG - chr7_1:44429158-44429177 Msa1020680:intron 40.0%
GACGCTTAATAAGAGACAGA+GGG + chr7_1:44429543-44429562 None:intergenic 40.0%
!! GAGAAGTATCAGACATGTGT+TGG - chr7_1:44429919-44429938 Msa1020680:intron 40.0%
AATGGATCCTTTCTTAGTGC+AGG - chr7_1:44430111-44430130 Msa1020680:intron 40.0%
AATGCACCTGGTCATAGATA+AGG + chr7_1:44430165-44430184 None:intergenic 40.0%
!! CTGTTTCTTTAGAGCAGATC+TGG + chr7_1:44430363-44430382 None:intergenic 40.0%
ACAAAAGCCTACCTCTTCTA+GGG + chr7_1:44430587-44430606 None:intergenic 40.0%
TACAAAAGCCTACCTCTTCT+AGG + chr7_1:44430588-44430607 None:intergenic 40.0%
! GAATTTCAGCTGACTCAACA+AGG + chr7_1:44430617-44430636 None:intergenic 40.0%
!! AGTTTTTGGAAGCAGTCAGT+GGG - chr7_1:44430853-44430872 Msa1020680:intron 40.0%
!! CTGCCGGTTAATTATTTTGC+AGG - chr7_1:44431138-44431157 Msa1020680:intron 40.0%
ATGCTCAGCAATCAAGAGAA+AGG - chr7_1:44431170-44431189 Msa1020680:intron 40.0%
GACAGATTGATCGAGAAAGT+AGG - chr7_1:44431242-44431261 Msa1020680:intron 40.0%
AGATTGATCGAGAAAGTAGG+TGG - chr7_1:44431245-44431264 Msa1020680:intron 40.0%
GATTGATCGAGAAAGTAGGT+GGG - chr7_1:44431246-44431265 Msa1020680:intron 40.0%
!! TGGGCTTCTAATGGTTCTAA+TGG - chr7_1:44431265-44431284 Msa1020680:intron 40.0%
! GGTTCTAATGGATCTCCTAA+TGG - chr7_1:44431277-44431296 Msa1020680:intron 40.0%
AATGGATCTCCTAATGGAGA+TGG - chr7_1:44431283-44431302 Msa1020680:intron 40.0%
GCTTGTATACCATCTCCATT+AGG + chr7_1:44431295-44431314 None:intergenic 40.0%
TAGGTTCAGACTATTCGACA+AGG - chr7_1:44431470-44431489 Msa1020680:intron 40.0%
CAAGCGTTCGTCAAACTTAA+GGG - chr7_1:44431502-44431521 Msa1020680:intron 40.0%
AAGCGTTCGTCAAACTTAAG+GGG - chr7_1:44431503-44431522 Msa1020680:intron 40.0%
!!! TGTGGTTTTTTATCACGTGC+AGG - chr7_1:44431691-44431710 Msa1020680:intron 40.0%
!!! GTGGTTTTTTATCACGTGCA+GGG - chr7_1:44431692-44431711 Msa1020680:intron 40.0%
TTCTGGTCAGAGGAATAGTT+CGG - chr7_1:44431730-44431749 Msa1020680:intron 40.0%
TCTCATCATCATCATCATGG+TGG - chr7_1:44431788-44431807 Msa1020680:intron 40.0%
ATGCTGACCAATCAGATTTG+AGG - chr7_1:44431876-44431895 Msa1020680:intron 40.0%
CCATTTCTATCAGTTGTTGC+CGG - chr7_1:44432188-44432207 Msa1020680:intron 40.0%
TACTTTCTTCAACAGCACAG+TGG + chr7_1:44432284-44432303 None:intergenic 40.0%
! ATGTTTTGTGTCTTCACACC+TGG - chr7_1:44432314-44432333 Msa1020680:intron 40.0%
! TTTTATTACAGGATCGCTGC+TGG + chr7_1:44432362-44432381 None:intergenic 40.0%
ACTCTTCGCAACACATCAAT+TGG + chr7_1:44432393-44432412 None:intergenic 40.0%
GATGTGTTGCGAAGAGTTAT+TGG - chr7_1:44432396-44432415 Msa1020680:intron 40.0%
AGATTTAGTGATGCCCAATC+TGG + chr7_1:44432456-44432475 None:intergenic 40.0%
GATTGGGCATCACTAAATCT+TGG - chr7_1:44432456-44432475 Msa1020680:intron 40.0%
GCAGACGAGAAATAAAGAAC+AGG + chr7_1:44432729-44432748 None:intergenic 40.0%
ACTCTTCTCGTGTGAAATGT+AGG - chr7_1:44432992-44433011 Msa1020680:intron 40.0%
GAGAGGGAAGGAATTAAAAC+AGG + chr7_1:44433115-44433134 None:intergenic 40.0%
CTCTCTTACATTGGACGTTA+AGG - chr7_1:44433173-44433192 Msa1020680:intron 40.0%
TTACATTGGACGTTAAGGTG+TGG - chr7_1:44433178-44433197 Msa1020680:intron 40.0%
TACATTGGACGTTAAGGTGT+GGG - chr7_1:44433179-44433198 Msa1020680:intron 40.0%
TGGGGATTATTTACCCTGTA+GGG + chr7_1:44433308-44433327 None:intergenic 40.0%
! ACAGTTTTCATCACCAAACC+TGG - chr7_1:44433440-44433459 Msa1020680:intron 40.0%
GCTAGAGAATCATATTGACC+AGG + chr7_1:44433461-44433480 None:intergenic 40.0%
AGTGAAGGAAAAGTTCATCC+AGG - chr7_1:44433481-44433500 Msa1020680:CDS 40.0%
GGATTCACACTAGAATTCCT+AGG - chr7_1:44433698-44433717 Msa1020680:intron 40.0%
!!! CACCCTTCTTGTTTTCAACT+TGG - chr7_1:44433766-44433785 Msa1020680:intron 40.0%
! TTGGTCTGGAATCGAAGTTA+TGG - chr7_1:44433785-44433804 Msa1020680:intron 40.0%
! GATTTTTGTTCGTAGACCGA+AGG - chr7_1:44433972-44433991 Msa1020680:intron 40.0%
! TCTGTTGTGCTACTAAGAGT+CGG + chr7_1:44434008-44434027 None:intergenic 40.0%
TCTTAGTAGCACAACAGATC+TGG - chr7_1:44434010-44434029 Msa1020680:intron 40.0%
CTTAGTAGCACAACAGATCT+GGG - chr7_1:44434011-44434030 Msa1020680:intron 40.0%
GAACAGGCAAACAATGATCA+CGG - chr7_1:44434162-44434181 Msa1020680:intron 40.0%
TGAAACTGCAGACATTGGAA+TGG - chr7_1:44434305-44434324 Msa1020680:intron 40.0%
GAAATGGTCACTCAGTCAAA+TGG + chr7_1:44434513-44434532 None:intergenic 40.0%
! ACAAAGTGTCTTGGAAGATG+AGG - chr7_1:44434697-44434716 Msa1020680:intron 40.0%
ATTCTGCAGCAAGCTCAATA+GGG + chr7_1:44434984-44435003 None:intergenic 40.0%
! AGAGTTAAAAAGGAGTGTGG+TGG - chr7_1:44435192-44435211 Msa1020680:exon 40.0%
! GAGTTAAAAAGGAGTGTGGT+GGG - chr7_1:44435193-44435212 Msa1020680:exon 40.0%
CAAACCTGTTTGCGGAACAT+GGG + chr7_1:44425151-44425170 None:intergenic 45.0%
AGGGTGTGTGATTGATGTGT+TGG - chr7_1:44425299-44425318 Msa1020680:CDS 45.0%
! ACGCCTTCGATCAAAAGTGT+CGG + chr7_1:44425396-44425415 None:intergenic 45.0%
TGTCAGACACTCACATGTGT+CGG + chr7_1:44425428-44425447 None:intergenic 45.0%
TGACACCGACACATGTGATT+AGG - chr7_1:44425443-44425462 Msa1020680:intron 45.0%
TGAGAAACCGTGCGAAAAGA+AGG - chr7_1:44425821-44425840 Msa1020680:intron 45.0%
! ACCACTTCCTTCTTTTCGCA+CGG + chr7_1:44425831-44425850 None:intergenic 45.0%
CTGAGATTTAGACAGGGCTT+TGG - chr7_1:44425863-44425882 Msa1020680:intron 45.0%
! AATCCAGGTTGGGGTAACTA+GGG + chr7_1:44425899-44425918 None:intergenic 45.0%
! TAATCCAGGTTGGGGTAACT+AGG + chr7_1:44425900-44425919 None:intergenic 45.0%
TCAGGGTTTAATCCAGGTTG+GGG + chr7_1:44425908-44425927 None:intergenic 45.0%
GTTCAGGGTTTAATCCAGGT+TGG + chr7_1:44425910-44425929 None:intergenic 45.0%
CCTTGTTCAGGGTTTAATCC+AGG + chr7_1:44425914-44425933 None:intergenic 45.0%
CCTGGATTAAACCCTGAACA+AGG - chr7_1:44425911-44425930 Msa1020680:CDS 45.0%
CTGCAATTGTTCGACAACAC+AGG - chr7_1:44426082-44426101 Msa1020680:CDS 45.0%
AATTGTTCGACAACACAGGG+AGG - chr7_1:44426086-44426105 Msa1020680:CDS 45.0%
TTGGTTCAGAATTGGAAGGG+TGG + chr7_1:44426136-44426155 None:intergenic 45.0%
AGATAGGCACCAAGTCAGTT+CGG - chr7_1:44426385-44426404 Msa1020680:intron 45.0%
CTAGCGTGTGATACGATTCA+CGG + chr7_1:44427270-44427289 None:intergenic 45.0%
ACTACGAAAAACACCCTCCA+TGG + chr7_1:44427483-44427502 None:intergenic 45.0%
TTACTTTCCAGGGAAGGACT+TGG - chr7_1:44427677-44427696 Msa1020680:intron 45.0%
! GCAAGTGCCCTAGAAACTTT+TGG - chr7_1:44427728-44427747 Msa1020680:intron 45.0%
! AGTGCCCTAGAAACTTTTGG+TGG - chr7_1:44427731-44427750 Msa1020680:intron 45.0%
! GTGCCCTAGAAACTTTTGGT+GGG - chr7_1:44427732-44427751 Msa1020680:intron 45.0%
! TGCCCTAGAAACTTTTGGTG+GGG - chr7_1:44427733-44427752 Msa1020680:intron 45.0%
CTACACTGATGGGGTCATTA+TGG + chr7_1:44427760-44427779 None:intergenic 45.0%
CTCCAAAAGCTACACTGATG+GGG + chr7_1:44427769-44427788 None:intergenic 45.0%
CCTCCAAAAGCTACACTGAT+GGG + chr7_1:44427770-44427789 None:intergenic 45.0%
ACCTCCAAAAGCTACACTGA+TGG + chr7_1:44427771-44427790 None:intergenic 45.0%
CACCGTTGGCAAGATTATAG+GGG + chr7_1:44428104-44428123 None:intergenic 45.0%
CCGAGACTCTCAAATTCCTT+GGG + chr7_1:44428608-44428627 None:intergenic 45.0%
CCCAAGGAATTTGAGAGTCT+CGG - chr7_1:44428605-44428624 Msa1020680:intron 45.0%
CCAAGGAATTTGAGAGTCTC+GGG - chr7_1:44428606-44428625 Msa1020680:intron 45.0%
CCAAGCTCTCTAATTCTTGG+AGG + chr7_1:44428638-44428657 None:intergenic 45.0%
CCTCCAAGAATTAGAGAGCT+TGG - chr7_1:44428635-44428654 Msa1020680:intron 45.0%
!! AACGTCAGAGGCATTTCGTT+TGG + chr7_1:44428684-44428703 None:intergenic 45.0%
AATCTGAAGGACAACGTCAG+AGG + chr7_1:44428696-44428715 None:intergenic 45.0%
!!! CGATGCTGCTTTTTCCACAA+GGG + chr7_1:44429175-44429194 None:intergenic 45.0%
!!! ACGATGCTGCTTTTTCCACA+AGG + chr7_1:44429176-44429195 None:intergenic 45.0%
ATCATGGGTGGATGTTACGT+TGG - chr7_1:44429231-44429250 Msa1020680:intron 45.0%
CTGAACTCCCAATAGCTGTT+GGG + chr7_1:44429287-44429306 None:intergenic 45.0%
ACTGAACTCCCAATAGCTGT+TGG + chr7_1:44429288-44429307 None:intergenic 45.0%
AACAGCTATTGGGAGTTCAG+TGG - chr7_1:44429287-44429306 Msa1020680:intron 45.0%
ACAGCTATTGGGAGTTCAGT+GGG - chr7_1:44429288-44429307 Msa1020680:intron 45.0%
CGACGCTTAATAAGAGACAG+AGG + chr7_1:44429544-44429563 None:intergenic 45.0%
TTTGGAGATAGGAATGCACC+TGG + chr7_1:44430177-44430196 None:intergenic 45.0%
AACTTGAAGAGTCTCTGTCC+AGG - chr7_1:44430791-44430810 Msa1020680:intron 45.0%
CATTTGAGAGAGCAGTAACC+TGG + chr7_1:44430812-44430831 None:intergenic 45.0%
!! GAGTTTTTGGAAGCAGTCAG+TGG - chr7_1:44430852-44430871 Msa1020680:intron 45.0%
GTAACGAAGATGTGCATCCA+TGG + chr7_1:44430880-44430899 None:intergenic 45.0%
AATGGAGCCGTACATTAACC+AGG - chr7_1:44431006-44431025 Msa1020680:intron 45.0%
GAGAGCTGCTTGCTCATAAT+TGG + chr7_1:44431197-44431216 None:intergenic 45.0%
! GAAAGTAGGTGGGCTTCTAA+TGG - chr7_1:44431256-44431275 Msa1020680:intron 45.0%
GGAGATGGTATACAAGCCAT+TGG - chr7_1:44431298-44431317 Msa1020680:intron 45.0%
GTAATGCAGAATGCTGCCAA+AGG - chr7_1:44431349-44431368 Msa1020680:intron 45.0%
GGAAAGGTTGAAAAGAGAGC+TGG - chr7_1:44431370-44431389 Msa1020680:intron 45.0%
CCTTAAGTTTGACGAACGCT+TGG + chr7_1:44431504-44431523 None:intergenic 45.0%
CCAAGCGTTCGTCAAACTTA+AGG - chr7_1:44431501-44431520 Msa1020680:intron 45.0%
AGCGTTCGTCAAACTTAAGG+GGG - chr7_1:44431504-44431523 Msa1020680:intron 45.0%
AATAGTTCGGAGCTTGGTTC+TGG - chr7_1:44431743-44431762 Msa1020680:intron 45.0%
! GTTCTGGACTTCTTAGTCGA+TGG - chr7_1:44431759-44431778 Msa1020680:intron 45.0%
GTTCACAGTGTGATGAGCAA+CGG + chr7_1:44431831-44431850 None:intergenic 45.0%
AATCTGAGAGCTCAGCAATG+AGG + chr7_1:44432097-44432116 None:intergenic 45.0%
TGAGCTCTCAGATTCCTGAA+AGG - chr7_1:44432103-44432122 Msa1020680:CDS 45.0%
GAGCTCTCAGATTCCTGAAA+GGG - chr7_1:44432104-44432123 Msa1020680:CDS 45.0%
CCGGCAACAACTGATAGAAA+TGG + chr7_1:44432191-44432210 None:intergenic 45.0%
!! TCGCTGCTGGTTCAAATTTC+TGG + chr7_1:44432349-44432368 None:intergenic 45.0%
ACCAAGGTTTCGATGAACAC+CGG + chr7_1:44432505-44432524 None:intergenic 45.0%
CCTTTGATATGTGCACACCA+AGG + chr7_1:44432521-44432540 None:intergenic 45.0%
! CCTTGGTGTGCACATATCAA+AGG - chr7_1:44432518-44432537 Msa1020680:intron 45.0%
AGAGCGAACCTACAACAGAA+TGG + chr7_1:44433157-44433176 None:intergenic 45.0%
GTAGGTTCGCTCTCTTACAT+TGG - chr7_1:44433164-44433183 Msa1020680:intron 45.0%
ATACGTTTGCCAACTCTGTC+TGG - chr7_1:44433238-44433257 Msa1020680:intron 45.0%
TACGTTTGCCAACTCTGTCT+GGG - chr7_1:44433239-44433258 Msa1020680:intron 45.0%
!! GCAATCAAGAAGTGCCTTTC+AGG - chr7_1:44433272-44433291 Msa1020680:intron 45.0%
AGGGACAAGATCAACCTGAA+AGG + chr7_1:44433289-44433308 None:intergenic 45.0%
! AGGTTGATCTTGTCCCTACA+GGG - chr7_1:44433292-44433311 Msa1020680:intron 45.0%
GTGGGGATTATTTACCCTGT+AGG + chr7_1:44433309-44433328 None:intergenic 45.0%
GGAAAAGTTCATCCAGGCAA+AGG - chr7_1:44433487-44433506 Msa1020680:CDS 45.0%
TCTTCTCTGCATACTGCCAA+GGG + chr7_1:44433954-44433973 None:intergenic 45.0%
ATCTTCTCTGCATACTGCCA+AGG + chr7_1:44433955-44433974 None:intergenic 45.0%
!! AGTCGGTACTGATTGTCCTT+CGG + chr7_1:44433991-44434010 None:intergenic 45.0%
CAATGATCACGGCCCTAATT+TGG - chr7_1:44434173-44434192 Msa1020680:intron 45.0%
ATGCGTTCCCTGCCAAATTA+GGG + chr7_1:44434188-44434207 None:intergenic 45.0%
AATGCGTTCCCTGCCAAATT+AGG + chr7_1:44434189-44434208 None:intergenic 45.0%
TAATTTGGCAGGGAACGCAT+TGG - chr7_1:44434188-44434207 Msa1020680:intron 45.0%
GCTTGTGAAACTGCAGACAT+TGG - chr7_1:44434300-44434319 Msa1020680:intron 45.0%
AACTGCAGACATTGGAATGG+TGG - chr7_1:44434308-44434327 Msa1020680:intron 45.0%
TATTTGCGCCATATTGCAGG+AGG + chr7_1:44434338-44434357 None:intergenic 45.0%
!! TGCTACTTTCAAGGTCAGTG+TGG - chr7_1:44434433-44434452 Msa1020680:intron 45.0%
GTCAAATGGCAATGTCACAG+AGG + chr7_1:44434499-44434518 None:intergenic 45.0%
AATCTGTAACTATGCAGGGG+AGG - chr7_1:44434925-44434944 Msa1020680:intron 45.0%
TTCTGCAGCAAGCTCAATAG+GGG + chr7_1:44434983-44435002 None:intergenic 45.0%
GATTCTGCAGCAAGCTCAAT+AGG + chr7_1:44434985-44435004 None:intergenic 45.0%
!!! TAAATTCTTTTATAAAATAA+AGG - chr7_1:44432749-44432768 Msa1020680:intron 5.0%
!! TAAAGTTAATATTAAAAAAA+AGG + chr7_1:44432852-44432871 None:intergenic 5.0%
TTCTCCCATGTTCCGCAAAC+AGG - chr7_1:44425144-44425163 Msa1020680:three_prime_UTR 50.0%
CCAAACCTGTTTGCGGAACA+TGG + chr7_1:44425152-44425171 None:intergenic 50.0%
CCATGTTCCGCAAACAGGTT+TGG - chr7_1:44425149-44425168 Msa1020680:three_prime_UTR 50.0%
! TCCCCGACACTTTTGATCGA+AGG - chr7_1:44425390-44425409 Msa1020680:intron 50.0%
!! GCCTTCGATCAAAAGTGTCG+GGG + chr7_1:44425394-44425413 None:intergenic 50.0%
!! CGCCTTCGATCAAAAGTGTC+GGG + chr7_1:44425395-44425414 None:intergenic 50.0%
!! CTTTTGATCGAAGGCGTGTC+TGG - chr7_1:44425399-44425418 Msa1020680:intron 50.0%
ACCGTGCGAAAAGAAGGAAG+TGG - chr7_1:44425827-44425846 Msa1020680:intron 50.0%
GGTTGGGGTAACTAGGGTTT+GGG + chr7_1:44425893-44425912 None:intergenic 50.0%
AGGTTGGGGTAACTAGGGTT+TGG + chr7_1:44425894-44425913 None:intergenic 50.0%
AAACCCTAGTTACCCCAACC+TGG - chr7_1:44425893-44425912 Msa1020680:CDS 50.0%
GGTGAAACAGATACAGGGCA+TGG - chr7_1:44426774-44426793 Msa1020680:intron 50.0%
GAAACAGATACAGGGCATGG+AGG - chr7_1:44426777-44426796 Msa1020680:intron 50.0%
! GGACTTGGAGAGGCATATGA+TGG - chr7_1:44427692-44427711 Msa1020680:intron 50.0%
! GCCCTAGAAACTTTTGGTGG+GGG - chr7_1:44427734-44427753 Msa1020680:intron 50.0%
GCCCCCACCAAAAGTTTCTA+GGG + chr7_1:44427738-44427757 None:intergenic 50.0%
! GACCCCATCAGTGTAGCTTT+TGG - chr7_1:44427764-44427783 Msa1020680:intron 50.0%
! CCCATCAGTGTAGCTTTTGG+AGG - chr7_1:44427767-44427786 Msa1020680:intron 50.0%
CAAGGAAGTCCTTCGATCAC+AGG - chr7_1:44428209-44428228 Msa1020680:CDS 50.0%
TCTTAACGTTGAGCTCGCAC+TGG + chr7_1:44428404-44428423 None:intergenic 50.0%
CCCGAGACTCTCAAATTCCT+TGG + chr7_1:44428609-44428628 None:intergenic 50.0%
CAGCTATTGGGAGTTCAGTG+GGG - chr7_1:44429289-44429308 Msa1020680:intron 50.0%
TATTGGGAGTTCAGTGGGGA+GGG - chr7_1:44429293-44429312 Msa1020680:intron 50.0%
CGTGCTTCCTGCACTAAGAA+AGG + chr7_1:44430121-44430140 None:intergenic 50.0%
! AGCCAGCCTTATCTATGACC+AGG - chr7_1:44430156-44430175 Msa1020680:CDS 50.0%
CACCTGGTCATAGATAAGGC+TGG + chr7_1:44430161-44430180 None:intergenic 50.0%
TGTAGCTACTGCCCTAGAAG+AGG - chr7_1:44430573-44430592 Msa1020680:intron 50.0%
GCAGAATGCTGCCAAAGGAA+AGG - chr7_1:44431354-44431373 Msa1020680:intron 50.0%
GCGTTCGTCAAACTTAAGGG+GGG - chr7_1:44431505-44431524 Msa1020680:intron 50.0%
ACTTAAGGGGGGACTGGAAA+AGG - chr7_1:44431516-44431535 Msa1020680:intron 50.0%
! GGCTCTAGCAGTCAACATTC+TGG - chr7_1:44431713-44431732 Msa1020680:intron 50.0%
GCAGTCAACATTCTGGTCAG+AGG - chr7_1:44431720-44431739 Msa1020680:intron 50.0%
CAGAGGAATAGTTCGGAGCT+TGG - chr7_1:44431737-44431756 Msa1020680:intron 50.0%
TTGTTGCCGGCAAGTCCAAT+GGG - chr7_1:44432201-44432220 Msa1020680:intron 50.0%
CTGAGATGACCACTTCCCAT+TGG + chr7_1:44432219-44432238 None:intergenic 50.0%
CAATGGGAAGTGGTCATCTC+AGG - chr7_1:44432217-44432236 Msa1020680:intron 50.0%
! AATTTCTGGACGTACGCTCC+AGG + chr7_1:44432335-44432354 None:intergenic 50.0%
! TGATGCCCAATCTGGTTCAG+GGG + chr7_1:44432448-44432467 None:intergenic 50.0%
! GTGATGCCCAATCTGGTTCA+GGG + chr7_1:44432449-44432468 None:intergenic 50.0%
! AGTGATGCCCAATCTGGTTC+AGG + chr7_1:44432450-44432469 None:intergenic 50.0%
TCCGGTGTTCATCGAAACCT+TGG - chr7_1:44432501-44432520 Msa1020680:intron 50.0%
AAGTTCCTCCCAGACAGAGT+TGG + chr7_1:44433250-44433269 None:intergenic 50.0%
!! CAGGTTGATCTTGTCCCTAC+AGG - chr7_1:44433291-44433310 Msa1020680:intron 50.0%
AGTAGCACAACAGATCTGGG+AGG - chr7_1:44434014-44434033 Msa1020680:intron 50.0%
ATCACGGCCCTAATTTGGCA+GGG - chr7_1:44434178-44434197 Msa1020680:intron 50.0%
TACTAAAGAAGGCCAGCCGA+TGG - chr7_1:44434245-44434264 Msa1020680:intron 50.0%
AGCCGATGGTCAATCTCGAA+GGG - chr7_1:44434259-44434278 Msa1020680:intron 50.0%
CACCCTTCGAGATTGACCAT+CGG + chr7_1:44434264-44434283 None:intergenic 50.0%
GGGTTGTAATGTCTGCCCTT+TGG - chr7_1:44435213-44435232 Msa1020680:five_prime_UTR 50.0%
! TTGGTCTGAGTCAAGAGCAC+TGG - chr7_1:44435284-44435303 Msa1020680:five_prime_UTR 50.0%
! GATAGGCGTTGTCGACGTGT+CGG - chr7_1:44425493-44425512 Msa1020680:intron 55.0%
TTCCAGGGAAGGACTTGGAG+AGG - chr7_1:44427682-44427701 Msa1020680:intron 55.0%
GGCCCCCACCAAAAGTTTCT+AGG + chr7_1:44427739-44427758 None:intergenic 55.0%
CTATTGGGAGTTCAGTGGGG+AGG - chr7_1:44429292-44429311 Msa1020680:intron 55.0%
!! AGGGAAGTGCTTTGGCAAGG+AGG - chr7_1:44429312-44429331 Msa1020680:CDS 55.0%
!! GGGAAGTGCTTTGGCAAGGA+GGG - chr7_1:44429313-44429332 Msa1020680:CDS 55.0%
GCTACTGCCCTAGAAGAGGT+AGG - chr7_1:44430577-44430596 Msa1020680:intron 55.0%
CGTCAAACTTAAGGGGGGAC+TGG - chr7_1:44431510-44431529 Msa1020680:intron 55.0%
! AGAGAGTGCGCTGGACCAAA+TGG - chr7_1:44432041-44432060 Msa1020680:intron 55.0%
GTGCGCTGGACCAAATGGAT+TGG - chr7_1:44432046-44432065 Msa1020680:intron 55.0%
GTTGTTGCCGGCAAGTCCAA+TGG - chr7_1:44432200-44432219 Msa1020680:intron 55.0%
CCACTTCCCATTGGACTTGC+CGG + chr7_1:44432210-44432229 None:intergenic 55.0%
GTTTGCCAACTCTGTCTGGG+AGG - chr7_1:44433242-44433261 Msa1020680:intron 55.0%
GATCACGGCCCTAATTTGGC+AGG - chr7_1:44434177-44434196 Msa1020680:intron 55.0%
CTTCGAGATTGACCATCGGC+TGG + chr7_1:44434260-44434279 None:intergenic 55.0%
CAGCCGATGGTCAATCTCGA+AGG - chr7_1:44434258-44434277 Msa1020680:intron 55.0%
GTGGAGCTCCTCCTGCAATA+TGG - chr7_1:44434327-44434346 Msa1020680:intron 55.0%
TGCCTCTCCAAGTCCTTCCC+TGG + chr7_1:44427687-44427706 None:intergenic 60.0%
!! CAGTGGGGAGGGAAGTGCTT+TGG - chr7_1:44429304-44429323 Msa1020680:CDS 60.0%
!! GGGAGGGAAGTGCTTTGGCA+AGG - chr7_1:44429309-44429328 Msa1020680:CDS 60.0%
CAGAGGGAGTGAGACAGTCG+AGG - chr7_1:44429777-44429796 Msa1020680:intron 60.0%
GGAAGCAGTCAGTGGGACCA+TGG - chr7_1:44430860-44430879 Msa1020680:intron 60.0%
CCGGCAAGTCCAATGGGAAG+TGG - chr7_1:44432207-44432226 Msa1020680:intron 60.0%
TGGGGCCCCTGAACCAGATT+GGG - chr7_1:44432440-44432459 Msa1020680:intron 60.0%
TGGCAGGGAACGCATTGGAC+TGG - chr7_1:44434193-44434212 Msa1020680:intron 60.0%
CGATCCTCGAGCTGTGGATG+AGG - chr7_1:44434948-44434967 Msa1020680:intron 60.0%
CCATCCTCATCCACAGCTCG+AGG + chr7_1:44434955-44434974 None:intergenic 60.0%
CCTCGAGCTGTGGATGAGGA+TGG - chr7_1:44434952-44434971 Msa1020680:intron 60.0%
! AGTGCAGGCAGAGAGTGCGC+TGG - chr7_1:44432032-44432051 Msa1020680:intron 65.0%
GTGGGGCCCCTGAACCAGAT+TGG - chr7_1:44432439-44432458 Msa1020680:intron 65.0%
GGGAGGCGATCCTCGAGCTG+TGG - chr7_1:44434942-44434961 Msa1020680:intron 70.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 44424827 44435494 44424827 ID=Msa1020680;Name=Msa1020680
chr7_1 mRNA 44424827 44435494 44424827 ID=Msa1020680-mRNA-1;Parent=Msa1020680;Name=Msa1020680-mRNA-1;_AED=0.12;_eAED=0.12;_QI=294|1|1|1|1|1|19|438|832
chr7_1 exon 44424827 44425379 44424827 ID=Msa1020680-mRNA-1:exon:8652;Parent=Msa1020680-mRNA-1
chr7_1 exon 44425876 44426360 44425876 ID=Msa1020680-mRNA-1:exon:8651;Parent=Msa1020680-mRNA-1
chr7_1 exon 44426813 44426906 44426813 ID=Msa1020680-mRNA-1:exon:8650;Parent=Msa1020680-mRNA-1
chr7_1 exon 44427008 44427153 44427008 ID=Msa1020680-mRNA-1:exon:8649;Parent=Msa1020680-mRNA-1
chr7_1 exon 44427782 44428120 44427782 ID=Msa1020680-mRNA-1:exon:8648;Parent=Msa1020680-mRNA-1
chr7_1 exon 44428196 44428282 44428196 ID=Msa1020680-mRNA-1:exon:8647;Parent=Msa1020680-mRNA-1
chr7_1 exon 44428378 44428608 44428378 ID=Msa1020680-mRNA-1:exon:8646;Parent=Msa1020680-mRNA-1
chr7_1 exon 44428717 44428848 44428717 ID=Msa1020680-mRNA-1:exon:8645;Parent=Msa1020680-mRNA-1
chr7_1 exon 44428946 44429161 44428946 ID=Msa1020680-mRNA-1:exon:8644;Parent=Msa1020680-mRNA-1
chr7_1 exon 44429294 44429335 44429294 ID=Msa1020680-mRNA-1:exon:8643;Parent=Msa1020680-mRNA-1
chr7_1 exon 44429413 44429508 44429413 ID=Msa1020680-mRNA-1:exon:8642;Parent=Msa1020680-mRNA-1
chr7_1 exon 44429594 44429641 44429594 ID=Msa1020680-mRNA-1:exon:8641;Parent=Msa1020680-mRNA-1
chr7_1 exon 44429727 44429792 44429727 ID=Msa1020680-mRNA-1:exon:8640;Parent=Msa1020680-mRNA-1
chr7_1 exon 44430144 44430188 44430144 ID=Msa1020680-mRNA-1:exon:8639;Parent=Msa1020680-mRNA-1
chr7_1 exon 44431374 44431436 44431374 ID=Msa1020680-mRNA-1:exon:8638;Parent=Msa1020680-mRNA-1
chr7_1 exon 44432091 44432161 44432091 ID=Msa1020680-mRNA-1:exon:8637;Parent=Msa1020680-mRNA-1
chr7_1 exon 44432533 44432633 44432533 ID=Msa1020680-mRNA-1:exon:8636;Parent=Msa1020680-mRNA-1
chr7_1 exon 44433461 44433537 44433461 ID=Msa1020680-mRNA-1:exon:8635;Parent=Msa1020680-mRNA-1
chr7_1 exon 44435156 44435494 44435156 ID=Msa1020680-mRNA-1:exon:8634;Parent=Msa1020680-mRNA-1
chr7_1 five_prime_UTR 44435201 44435494 44435201 ID=Msa1020680-mRNA-1:five_prime_utr;Parent=Msa1020680-mRNA-1
chr7_1 CDS 44435156 44435200 44435156 ID=Msa1020680-mRNA-1:cds;Parent=Msa1020680-mRNA-1
chr7_1 CDS 44433461 44433537 44433461 ID=Msa1020680-mRNA-1:cds;Parent=Msa1020680-mRNA-1
chr7_1 CDS 44432533 44432633 44432533 ID=Msa1020680-mRNA-1:cds;Parent=Msa1020680-mRNA-1
chr7_1 CDS 44432091 44432161 44432091 ID=Msa1020680-mRNA-1:cds;Parent=Msa1020680-mRNA-1
chr7_1 CDS 44431374 44431436 44431374 ID=Msa1020680-mRNA-1:cds;Parent=Msa1020680-mRNA-1
chr7_1 CDS 44430144 44430188 44430144 ID=Msa1020680-mRNA-1:cds;Parent=Msa1020680-mRNA-1
chr7_1 CDS 44429727 44429792 44429727 ID=Msa1020680-mRNA-1:cds;Parent=Msa1020680-mRNA-1
chr7_1 CDS 44429594 44429641 44429594 ID=Msa1020680-mRNA-1:cds;Parent=Msa1020680-mRNA-1
chr7_1 CDS 44429413 44429508 44429413 ID=Msa1020680-mRNA-1:cds;Parent=Msa1020680-mRNA-1
chr7_1 CDS 44429294 44429335 44429294 ID=Msa1020680-mRNA-1:cds;Parent=Msa1020680-mRNA-1
chr7_1 CDS 44428946 44429161 44428946 ID=Msa1020680-mRNA-1:cds;Parent=Msa1020680-mRNA-1
chr7_1 CDS 44428717 44428848 44428717 ID=Msa1020680-mRNA-1:cds;Parent=Msa1020680-mRNA-1
chr7_1 CDS 44428378 44428608 44428378 ID=Msa1020680-mRNA-1:cds;Parent=Msa1020680-mRNA-1
chr7_1 CDS 44428196 44428282 44428196 ID=Msa1020680-mRNA-1:cds;Parent=Msa1020680-mRNA-1
chr7_1 CDS 44427782 44428120 44427782 ID=Msa1020680-mRNA-1:cds;Parent=Msa1020680-mRNA-1
chr7_1 CDS 44427008 44427153 44427008 ID=Msa1020680-mRNA-1:cds;Parent=Msa1020680-mRNA-1
chr7_1 CDS 44426813 44426906 44426813 ID=Msa1020680-mRNA-1:cds;Parent=Msa1020680-mRNA-1
chr7_1 CDS 44425876 44426360 44425876 ID=Msa1020680-mRNA-1:cds;Parent=Msa1020680-mRNA-1
chr7_1 CDS 44425265 44425379 44425265 ID=Msa1020680-mRNA-1:cds;Parent=Msa1020680-mRNA-1
chr7_1 three_prime_UTR 44424827 44425264 44424827 ID=Msa1020680-mRNA-1:three_prime_utr;Parent=Msa1020680-mRNA-1
Gene Sequence

>Msa1020680

ATGCAATTCGCTAAGCTTGATGATTCTCCCATGTTCCGCAAACAGATACAGGGCATGGAGGAAAGTGCCGAATCTTTGAGAGAGAGAAGTTTGAAATTTTACAAGGGATGCAGAAAATACACGGAAGGACTTGGAGAGGCATATGATGGAGACATTGCATTTGCAAGTGCCCTAGAAACTTTTGGTGGGGGCCATAATGACCCCATCAGTGTAGCTTTTGGAGGCCCTGTTATGACCAAATTCACTATAGCATTAAGAGAAATCGGGACATACAAGGAAGTCCTTCGATCACAGGTTGAGCACATGTTAAATGACAGATTGCTCCAGTTTGTCAATATTGATTTGCAAGAAGTCAAGGAAGCACGAAAACGCTTTGACAAAGCCAGCCTTATCTATGACCAGACTCGTGAAAAGTTTCTTTCACTGAGAAAAGGTACAAAAAGTGATGTAGCTACTGCCCTAGAAGAGGAGCTTCATAGTGCAAGAACTACATTTGAGCAAACTCGATTTAATCTGGTTACTGCTCTCTCAAATGTTGAAGCAAAGAAGAGATTTGAGTTTTTGGAAGCAGTCAGTGGGACCATGGATGCACATCTTCGTTACTTCAAACAGGGGTATGAACTATTACATCAAATGGAGCCGTACATTAACCAGGTCTTGACTTATGCTCAGCAATCAAGAGAAAGGTCCAATTATGAGCAAGCAGCTCTCAATGAAAGAATGCAAGATTACAAACGACAGATTGATCGAGAAAGTAGGTGGGCTTCTAATGGTTCTAATGGATCTCCTAATGGAGATGGTATACAAGCCATTGGTAGAAGTTCACATAAGATGATAGAAGCAGTAATGCAGAATGCTGCCAAAGGAAAGGTTCAGACTATTCGACAAGGTTATCTCTCCAAGCGTTCGTCAAACTTAAGGGGGGACTGGAAAAGGAGATTTTTCGTTCTTGATAGTCGGGGAATGCTGTATTACTACCGTAAACAATGCAGCAAACCATCTGGCTCTAGCAGTCAACATTCTGGTCAGAGGAATAGTTCGGAGCTTGGTTCTGGACTTCTTAGTCGATGGCTGTCTTCTCATCATCATCATCATGGTGGAGTACATGATGAGAAATCCGTTGCTCATCACACTGTGAACCTGCTTACATCAACAATCAAAGTTGATGCTGACCAATCAGATTTGAGGTTTTGCTTCCGCATCATTTCACCAACAAAGAACTACACTTTGCAGGCAGAGAGTGCGCTGGACCAAATGGATTGGATTGAAAAAATCACAGGTGTTATTGCCTCATTGCTGAGCTCTCAGATTCCTGAAAGGTTGTTGCCGGCAAGTCCAATGGGAAGTGGTCATCTCAGGTCTACCAGTGAGAGTAGTTCTTTTGAAAGTTCAGATTTTGACCACTGTGCTGTTGAAGAAAGTACAGCTGATAGATGTTTTGTGTCTTCACACCTGGAGCGTACGTCCAGAAATTTGAACCAGCAGCGATCCTGTAATAAAAGTGAAAAACCAATTGATGTGTTGCGAAGAGTTATTGGGAATGATAAATGTGCTGATTGTGGGGCCCCTGAACCAGATTGGGCATCACTAAATCTTGGCGTTCTTGTTTGCATTGAATGTTCCGGTGTTCATCGAAACCTTGGTGTGCACATATCAAAGGTTCGCTCTCTTACATTGGACGTTAAGGTGTGGGAACCTTCTGTGATAACTTTATTTCAGTCTCTTGGGAATACGTTTGCCAACTCTGTCTGGGAGGAACTTTTGCAATCAAGAAGTGCCTTTCAGGTTGATCTTGTCCCTACAGGCTCGAGCAAGTCCGATAAGCCACAAACAGTTTTCATCACCAAACCTGGTCAATATGATTCTCTAGCAGTGAAGGAAAAGTTCATCCAGGCAAAGTATGCAGAGAAGATTTTTGTTCGTAGACCGAAGGACAATCAGTACCGACTCTTAGTAGCACAACAGATCTGGGAGGCTGTTCGTGCTAATGACAAGAAAGCCGTATACCGCTACATTGTTAATTCGGATGTTGATGTCAACGTTGTTTATGAGCAAGCATGCAACAACTCTTTAACCCTTGCCAAAGTAATGCTATTACAAGAACAGGCAAACAATGATCACGGCCCTAATTTGGCAGGGAACGCATTGGACTGGTCTTCTAATTGCTCTATGAATTTGGTGGGTACTAAAGAAGGCCAGCCGATGGTCAATCTCGAAGGGTGCACACTACTTCACATTGCTTGTGAAACTGCAGACATTGGAATGGTGGAGCTCCTCCTGCAATATGGCGCAAATATTAATGCAACTGATTTGAGAGGTCGAACTCCTTTACATCGTTGTATTCTCAAAGGAAGATCTATAATTGCAAGATTGCTACTTTCAAGGGGAGGCGATCCTCGAGCTGTGGATGAGGATGGAAGAACCCCTATTGAGCTTGCTGCAGAATCAAATGCTGATGACAGAGTAGTCCATGCTCCATCAAATGATTATAATGGATGA
Protein sequence

>Msa1020680

MQFAKLDDSPMFRKQIQGMEESAESLRERSLKFYKGCRKYTEGLGEAYDGDIAFASALETFGGGHNDPISVAFGGPVMTKFTIALREIGTYKEVLRSQVEHMLNDRLLQFVNIDLQEVKEARKRFDKASLIYDQTREKFLSLRKGTKSDVATALEEELHSARTTFEQTRFNLVTALSNVEAKKRFEFLEAVSGTMDAHLRYFKQGYELLHQMEPYINQVLTYAQQSRERSNYEQAALNERMQDYKRQIDRESRWASNGSNGSPNGDGIQAIGRSSHKMIEAVMQNAAKGKVQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKPSGSSSQHSGQRNSSELGSGLLSRWLSSHHHHHGGVHDEKSVAHHTVNLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIASLLSSQIPERLLPASPMGSGHLRSTSESSSFESSDFDHCAVEESTADRCFVSSHLERTSRNLNQQRSCNKSEKPIDVLRRVIGNDKCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNTFANSVWEELLQSRSAFQVDLVPTGSSKSDKPQTVFITKPGQYDSLAVKEKFIQAKYAEKIFVRRPKDNQYRLLVAQQIWEAVRANDKKAVYRYIVNSDVDVNVVYEQACNNSLTLAKVMLLQEQANNDHGPNLAGNALDWSSNCSMNLVGTKEGQPMVNLEGCTLLHIACETADIGMVELLLQYGANINATDLRGRTPLHRCILKGRSIIARLLLSRGGDPRAVDEDGRTPIELAAESNADDRVVHAPSNDYNG*