AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1140220

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1140220 MtrunA17_Chr7g0221441 98.798 832 10 0 1 832 1 832 0.0 1724
Msa1140220 MtrunA17_Chr8g0385781 58.486 819 302 6 1 818 1 782 0.0 976
Msa1140220 MtrunA17_Chr3g0131671 58.223 833 302 9 1 825 1 795 0.0 937
Msa1140220 MtrunA17_Chr4g0037651 47.619 819 363 11 3 818 5 760 0.0 739
Msa1140220 MtrunA17_Chr2g0318391 41.259 143 53 3 500 642 14 125 1.84e-25 110
Msa1140220 MtrunA17_Chr8g0360731 41.259 143 53 3 500 642 14 125 1.21e-24 108
Msa1140220 MtrunA17_Chr8g0352731 34.857 175 84 4 513 686 5 150 2.66e-23 98.6
Msa1140220 MtrunA17_Chr6g0481511 37.908 153 59 4 491 637 17 139 9.03e-23 99.0
Msa1140220 MtrunA17_Chr2g0292461 39.535 129 53 4 514 641 30 134 3.87e-19 89.7
Msa1140220 MtrunA17_Chr3g0083541 38.686 137 59 3 505 640 54 166 1.63e-18 89.0
Msa1140220 MtrunA17_Chr8g0380371 68.293 41 13 0 514 554 21 61 5.85e-15 70.5
Msa1140220 MtrunA17_Chr8g0366731 49.254 67 32 1 514 580 22 86 3.58e-14 75.5
Msa1140220 MtrunA17_Chr8g0366741 43.836 73 39 1 514 586 22 92 1.51e-13 73.6
Msa1140220 MtrunA17_Chr1g0182571 45.333 75 39 1 508 582 10 82 1.69e-13 73.9
Msa1140220 MtrunA17_Chr7g0262921 47.826 69 34 1 514 582 16 82 1.64e-12 70.5
Msa1140220 MtrunA17_Chr5g0405451 38.554 83 51 0 739 821 334 416 9.93e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1140220 AT5G13300.1 77.043 832 180 3 1 832 1 821 0.0 1281
Msa1140220 AT5G61980.1 66.189 837 265 9 1 830 1 826 0.0 1087
Msa1140220 AT1G10870.2 44.676 817 397 15 3 818 4 766 0.0 672
Msa1140220 AT1G10870.1 44.798 817 391 16 3 818 4 761 0.0 669
Msa1140220 AT1G60860.1 43.985 823 390 14 3 818 4 762 0.0 662
Msa1140220 AT1G60860.2 42.517 715 340 14 111 818 1 651 0.0 538
Msa1140220 AT1G60860.3 41.140 649 319 13 173 818 3 591 4.86e-153 461
Msa1140220 AT5G54310.1 43.411 129 42 3 514 642 28 125 8.74e-25 109
Msa1140220 AT3G17660.4 35.294 153 63 3 488 640 7 123 3.15e-22 95.5
Msa1140220 AT3G17660.1 36.170 141 59 2 500 640 14 123 7.40e-22 95.9
Msa1140220 AT3G17660.2 35.294 153 63 3 488 640 7 123 1.78e-21 95.1
Msa1140220 AT4G21160.2 42.636 129 49 5 514 641 27 131 9.55e-21 95.1
Msa1140220 AT4G21160.3 42.636 129 49 5 514 641 27 131 9.55e-21 95.1
Msa1140220 AT4G21160.1 42.636 129 49 5 514 641 27 131 9.55e-21 95.1
Msa1140220 AT4G21160.4 42.636 129 49 5 514 641 27 131 9.55e-21 95.1
Msa1140220 AT3G07940.2 40.940 149 59 7 501 645 43 166 5.22e-19 88.6
Msa1140220 AT4G05330.3 39.535 129 53 4 514 641 27 131 2.59e-18 87.8
Msa1140220 AT4G05330.1 39.535 129 53 4 514 641 27 131 2.59e-18 87.8
Msa1140220 AT3G07940.1 40.940 149 59 7 501 645 43 166 3.50e-18 88.2
Msa1140220 AT3G17660.3 30.719 153 60 3 488 640 7 113 1.70e-14 73.9
Msa1140220 AT4G17890.2 45.205 73 38 1 514 586 25 95 2.61e-13 73.2
Msa1140220 AT4G17890.1 45.205 73 38 1 514 586 25 95 2.70e-13 73.2
Msa1140220 AT5G46750.1 45.205 73 38 1 514 586 22 92 5.45e-13 72.4
Msa1140220 AT3G53710.1 48.438 64 31 1 514 577 16 77 9.41e-13 72.0
Msa1140220 AT3G53710.3 48.438 64 31 1 514 577 16 77 9.41e-13 72.0
Msa1140220 AT3G53710.2 48.438 64 31 1 514 577 16 77 9.41e-13 72.0
Msa1140220 AT2G35210.2 39.796 98 51 2 489 586 3 92 1.22e-12 70.9
Msa1140220 AT2G35210.1 48.611 72 31 1 489 560 3 68 1.67e-12 70.9
Msa1140220 AT2G37550.2 48.438 64 31 1 514 577 16 77 2.76e-12 70.5
Msa1140220 AT2G37550.1 48.438 64 31 1 514 577 16 77 2.76e-12 70.5
Msa1140220 AT5G66055.1 47.297 74 39 0 739 812 325 398 8.98e-12 68.6

Find 203 sgRNAs with CRISPR-Local

Find 653 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCGCTGCTGGTTCAAATTTC+TGG 0.132441 7_4:+11590509 None:intergenic
TTCTAATTGCTCTATGAATT+TGG 0.168012 7_4:-11588338 Msa1140220:CDS
GCAATCAAGAAGTGCCTTTC+AGG 0.187884 7_4:-11589296 Msa1140220:CDS
TATACGAAAGTTACCCTTTC+AGG 0.190867 7_4:+11590738 None:intergenic
AATGCGTTCCCTGCCAAATT+AGG 0.193423 7_4:+11588370 None:intergenic
TCTTAATGCTATAGTGAATT+TGG 0.197605 7_4:+11594734 None:intergenic
GAGAGCTGCTTGCTCATAAT+TGG 0.206301 7_4:+11591661 None:intergenic
CAATGATCACGGCCCTAATT+TGG 0.249954 7_4:-11588383 Msa1140220:CDS
AATAGTTCGGAGCTTGGTTC+TGG 0.296829 7_4:-11591112 Msa1140220:CDS
ACTAGTATGAAGAGTTAAAA+AGG 0.301360 7_4:-11587376 Msa1140220:three_prime_UTR
ATTAACAATGTAGCGGTATA+CGG 0.302643 7_4:+11588495 None:intergenic
TACAAAAGCCTACCTCTTCT+AGG 0.303309 7_4:+11592270 None:intergenic
GATTCTGCAGCAAGCTCAAT+AGG 0.316009 7_4:+11587576 None:intergenic
CAGGTTGATCTTGTCCCTAC+AGG 0.324179 7_4:-11589277 Msa1140220:CDS
CTACACTGATGGGGTCATTA+TGG 0.324472 7_4:+11595148 None:intergenic
GACCCCATCAGTGTAGCTTT+TGG 0.325584 7_4:-11595141 Msa1140220:CDS
ATAGTGAATTTGGTCATAAC+AGG 0.328216 7_4:+11594744 None:intergenic
AGTGATGCCCAATCTGGTTC+AGG 0.336427 7_4:+11590408 None:intergenic
ATAACTTTATTTCAGTCTCT+TGG 0.340949 7_4:-11589355 Msa1140220:CDS
AACAAAGAACTACACTTTGC+AGG 0.344247 7_4:-11590933 Msa1140220:intron
TAATATTTGCGCCATATTGC+AGG 0.345337 7_4:+11588218 None:intergenic
ACTATAGCATTAAGAGAAAT+CGG 0.349793 7_4:-11594726 Msa1140220:CDS
CTCTCTTACATTGGACGTTA+AGG 0.354608 7_4:-11589395 Msa1140220:CDS
CCAAGCGTTCGTCAAACTTA+AGG 0.354634 7_4:-11591354 Msa1140220:CDS
GCAAGTGCCCTAGAAACTTT+TGG 0.355212 7_4:-11595177 Msa1140220:CDS
CCACTTCCCATTGGACTTGC+CGG 0.360900 7_4:+11590648 None:intergenic
ATACATTTGCCAACTCTGTC+TGG 0.361257 7_4:-11589330 Msa1140220:CDS
TGAGCAAACTCGATTTAATC+TGG 0.361409 7_4:-11592149 Msa1140220:intron
TCTTAGTAGCACAACAGATC+TGG 0.365114 7_4:-11588546 Msa1140220:CDS
TGGGCTTCTAATGGTTCTAA+TGG 0.365499 7_4:-11591590 Msa1140220:CDS
GCTCCATCAAATGATTCTAA+TGG 0.369320 7_4:-11587528 Msa1140220:CDS
GCAAATCAATATTGACAAAC+TGG 0.370026 7_4:+11593952 None:intergenic
CATCCATTAGAATCATTTGA+TGG 0.371256 7_4:+11587525 None:intergenic
ATGCGTTCCCTGCCAAATTA+GGG 0.379799 7_4:+11588371 None:intergenic
TTGCAAGATTGCTACTTTCA+AGG 0.380878 7_4:-11588132 Msa1140220:intron
GAAAACTGTTTGTGGCTTAT+CGG 0.383032 7_4:+11589142 None:intergenic
ACTCTTCGCAACACATCAAT+TGG 0.383417 7_4:+11590465 None:intergenic
GGCTCTAGCAGTCAACATTC+TGG 0.387411 7_4:-11591142 Msa1140220:CDS
AACATTACTAAATTGTTGCT+TGG 0.390803 7_4:+11587238 None:intergenic
TTCTCCTATGTTCCGCAAAC+AGG 0.393181 7_4:-11597715 Msa1140220:intron
GATGTGTTGCGAAGAGTTAT+TGG 0.395797 7_4:-11590459 Msa1140220:CDS
GTGGAGCTCCTCCTGCAATA+TGG 0.396075 7_4:-11588229 Msa1140220:CDS
CTTGTTTGCATTGAATGTTC+CGG 0.396172 7_4:-11590372 Msa1140220:CDS
GGTTCTAATGGATCTCCTAA+TGG 0.402471 7_4:-11591578 Msa1140220:CDS
AGATTTAGTGATGCCCAATC+TGG 0.407169 7_4:+11590402 None:intergenic
TAACTTTATTTCAGTCTCTT+GGG 0.409140 7_4:-11589354 Msa1140220:CDS
CAAGCGTTCGTCAAACTTAA+GGG 0.412490 7_4:-11591353 Msa1140220:CDS
AGTAATGCTATTACAAGAAC+AGG 0.412893 7_4:-11588410 Msa1140220:CDS
AGAATCATATTGACCAGGTT+TGG 0.417148 7_4:+11589115 None:intergenic
ATTCTGCAGCAAGCTCAATA+GGG 0.419208 7_4:+11587577 None:intergenic
ATGGTTTGCTGCATTGTTTA+CGG 0.421371 7_4:+11591275 None:intergenic
ATACCGCTACATTGTTAATT+CGG 0.421557 7_4:-11588491 Msa1140220:CDS
TTCTTGTAATAGCATTACTT+TGG 0.424670 7_4:+11588414 None:intergenic
ATGCTGACCAATCAGATTTG+AGG 0.438644 7_4:-11590979 Msa1140220:CDS
TTACTGGATTATTACTTGGC+AGG 0.444030 7_4:-11587088 Msa1140220:three_prime_UTR
TGTTAAAGAATACCTTTGCC+TGG 0.445974 7_4:+11589069 None:intergenic
ATGTGTTGCGAAGAGTTATT+GGG 0.448370 7_4:-11590458 Msa1140220:CDS
CTTTGATTGTTGATGTAAGC+AGG 0.452904 7_4:+11591005 None:intergenic
CCATTTCTATCAGTTGTTGC+CGG 0.453353 7_4:-11590667 Msa1140220:intron
GTATGAACTATTACATCAAA+TGG 0.454227 7_4:-11591867 Msa1140220:CDS
GTGGGGCCCCTGAACCAGAT+TGG 0.454280 7_4:-11590416 Msa1140220:CDS
TGCAAAGTGTAGTTCTTTGT+TGG 0.456177 7_4:+11590935 None:intergenic
GTAGGTTCGCTCTCTTACAT+TGG 0.459438 7_4:-11589404 Msa1140220:intron
TGGGGCCCCTGAACCAGATT+GGG 0.460177 7_4:-11590415 Msa1140220:CDS
GTGATGCCCAATCTGGTTCA+GGG 0.462999 7_4:+11590409 None:intergenic
TGTATTACTGGATTATTACT+TGG 0.464472 7_4:-11587092 Msa1140220:three_prime_UTR
ACATCTTCGTTACTTCAAAC+AGG 0.464760 7_4:-11591968 Msa1140220:intron
TGATGAAGATGTGATACATT+AGG 0.468537 7_4:-11587185 Msa1140220:three_prime_UTR
TTACTTTCCAGGGAAGGACT+TGG 0.469478 7_4:-11595228 Msa1140220:intron
GCTTGTATACCATCTCCATT+AGG 0.473433 7_4:+11591563 None:intergenic
CAATGGGAAGTGGTCATCTC+AGG 0.473521 7_4:-11590638 Msa1140220:CDS
GAAAGTAGGTGGGCTTCTAA+TGG 0.481638 7_4:-11591599 Msa1140220:CDS
GATCACGGCCCTAATTTGGC+AGG 0.483100 7_4:-11588379 Msa1140220:CDS
CCTTAAGTTTGACGAACGCT+TGG 0.488106 7_4:+11591354 None:intergenic
CAGAGGAATAGTTCGGAGCT+TGG 0.490071 7_4:-11591118 Msa1140220:CDS
GATTGGGCATCACTAAATCT+TGG 0.493255 7_4:-11590399 Msa1140220:CDS
TGGCAGGGAACGCATTGGAC+TGG 0.495152 7_4:-11588363 Msa1140220:CDS
GTTCTGGACTTCTTAGTCGA+TGG 0.495196 7_4:-11591096 Msa1140220:CDS
ACTTCTCTCTCTCAAAGATT+CGG 0.496519 7_4:+11596109 None:intergenic
AAGTTTCTTTCACTGAGAAA+AGG 0.500366 7_4:-11592317 Msa1140220:CDS
AGCAAAACCTCAAATCTGAT+TGG 0.500595 7_4:+11590972 None:intergenic
CCTCCAAAAGCTACACTGAT+GGG 0.501052 7_4:+11595138 None:intergenic
TATCTTATATATAATATACT+TGG 0.506547 7_4:+11587475 None:intergenic
ACACTAATAAGAAAACTCTC+TGG 0.507040 7_4:-11587502 Msa1140220:three_prime_UTR
GTAATAGCATTACTTTGGCA+AGG 0.507209 7_4:+11588419 None:intergenic
GTTGTTGCCGGCAAGTCCAA+TGG 0.509510 7_4:-11590655 Msa1140220:CDS
AATTTCTGGACGTACGCTCC+AGG 0.514396 7_4:+11590523 None:intergenic
ATGATAAATGTGCTGATTGT+GGG 0.515223 7_4:-11590434 Msa1140220:CDS
CTTAGTAGCACAACAGATCT+GGG 0.517392 7_4:-11588545 Msa1140220:CDS
TTTGTGCATCCTATGTACAT+TGG 0.519372 7_4:-11587155 Msa1140220:three_prime_UTR
GGACTTGGAGAGGCATATGA+TGG 0.521668 7_4:-11595213 Msa1140220:CDS
GAGCTCTCAGATTCCTGAAA+GGG 0.521977 7_4:-11590751 Msa1140220:intron
CAAGGAAGTCCTTCGATCAC+AGG 0.522285 7_4:-11594697 Msa1140220:intron
AGGTTGTAATGTCTGCCCTT+TGG 0.522542 7_4:-11587345 Msa1140220:three_prime_UTR
TAGAATCATTTGATGGAGCA+TGG 0.523841 7_4:+11587532 None:intergenic
CAAACCTGTTTGCGGAACAT+AGG 0.524378 7_4:+11597711 None:intergenic
GTGCGCTGGACCAAATGGAT+TGG 0.524874 7_4:-11590809 Msa1140220:CDS
AGAGAGTGCGCTGGACCAAA+TGG 0.525588 7_4:-11590814 Msa1140220:CDS
TACTGGATTATTACTTGGCA+GGG 0.526366 7_4:-11587087 Msa1140220:three_prime_UTR
TTCTGGTCAGAGGAATAGTT+CGG 0.526551 7_4:-11591125 Msa1140220:CDS
CCTCGAGCTGTGGATGAGGA+TGG 0.527146 7_4:-11587606 Msa1140220:CDS
TTCAAAAGAACTACTCTCAC+TGG 0.527595 7_4:+11590611 None:intergenic
AGTCGGTACTGATTGTCCTT+CGG 0.529976 7_4:+11588568 None:intergenic
TGGGGATTATTTACCCTGTA+GGG 0.530167 7_4:+11589263 None:intergenic
AATTGCTCTATGAATTTGGT+GGG 0.530259 7_4:-11588334 Msa1140220:CDS
CTGAGATGACCACTTCCCAT+TGG 0.531493 7_4:+11590639 None:intergenic
TTGAGAATACAACGATGTAA+AGG 0.532368 7_4:+11588169 None:intergenic
GTGGGGATTATTTACCCTGT+AGG 0.542017 7_4:+11589262 None:intergenic
ATGCTCAGCAATCAAGAGAA+AGG 0.542125 7_4:-11591685 Msa1140220:CDS
AAGATGTGATACATTAGGCT+AGG 0.543238 7_4:-11587180 Msa1140220:three_prime_UTR
AATTTGGTGGGTACTAAAGA+AGG 0.543440 7_4:-11588322 Msa1140220:CDS
TTGTTGCCGGCAAGTCCAAT+GGG 0.543876 7_4:-11590654 Msa1140220:CDS
TAATAGCATTACTTTGGCAA+GGG 0.544635 7_4:+11588420 None:intergenic
CTTCGAGATTGACCATCGGC+TGG 0.546237 7_4:+11588299 None:intergenic
TAATTTGGCAGGGAACGCAT+TGG 0.547365 7_4:-11588368 Msa1140220:CDS
TACATTTGCCAACTCTGTCT+GGG 0.547399 7_4:-11589329 Msa1140220:CDS
ATATGATTCTCTAGCAGTGA+AGG 0.549569 7_4:-11589102 Msa1140220:CDS
GGGAGGCGATCCTCGAGCTG+TGG 0.550478 7_4:-11587616 Msa1140220:CDS
TAATTGCTCTATGAATTTGG+TGG 0.550506 7_4:-11588335 Msa1140220:CDS
TCCGGTGTTCATCGAAACCT+TGG 0.552972 7_4:-11590354 Msa1140220:CDS
ACCTCCAAAAGCTACACTGA+TGG 0.553050 7_4:+11595137 None:intergenic
TTACATCGTTGTATTCTCAA+AGG 0.553175 7_4:-11588166 Msa1140220:CDS
CTTATGTGAACTTCTACCAA+TGG 0.555656 7_4:+11591541 None:intergenic
TACATTGGACGTTAAGGTGT+GGG 0.556800 7_4:-11589389 Msa1140220:CDS
TGAAATAAAGTTATCACAGA+AGG 0.557098 7_4:+11589364 None:intergenic
ACAAAAGCCTACCTCTTCTA+GGG 0.557197 7_4:+11592271 None:intergenic
AATGATAAATGTGCTGATTG+TGG 0.559781 7_4:-11590435 Msa1140220:CDS
AAGAGAAATCGGGACATACA+AGG 0.560937 7_4:-11594715 Msa1140220:CDS
TATTGATTTGCAAGAAGTCA+AGG 0.561136 7_4:-11593940 Msa1140220:intron
CTATAGCATTAAGAGAAATC+GGG 0.563886 7_4:-11594725 Msa1140220:CDS
AGATGTGATACATTAGGCTA+GGG 0.564629 7_4:-11587179 Msa1140220:three_prime_UTR
AATGGATCTCCTAATGGAGA+TGG 0.565937 7_4:-11591572 Msa1140220:CDS
GCAGAATGCTGCCAAGGGAA+AGG 0.568293 7_4:-11591501 Msa1140220:intron
AATGCACCTGGTCATAGATA+AGG 0.569583 7_4:+11592693 None:intergenic
TGTTAAATTGACATAAACCT+AGG 0.570433 7_4:-11597789 Msa1140220:five_prime_UTR
GGAGATGGTATACAAGCCAT+TGG 0.574707 7_4:-11591557 Msa1140220:CDS
AGTGCAGGCAGAGAGTGCGC+TGG 0.574995 7_4:-11590823 Msa1140220:intron
CCGGCAAGTCCAATGGGAAG+TGG 0.575473 7_4:-11590648 Msa1140220:CDS
AGGTTGATCTTGTCCCTACA+GGG 0.575707 7_4:-11589276 Msa1140220:intron
GTAACGAAGATGTGCATCCA+TGG 0.575869 7_4:+11591978 None:intergenic
TTGGTGATGAAAACTGTTTG+TGG 0.577029 7_4:+11589134 None:intergenic
CCTTGGTGTGCACATATCAA+AGG 0.577329 7_4:-11590337 Msa1140220:intron
AGTAATGCAGAATGCTGCCA+AGG 0.579392 7_4:-11591507 Msa1140220:CDS
GCTTGTGAAACTGCAGACAT+TGG 0.580822 7_4:-11588256 Msa1140220:CDS
CAGCCGATGGTCAATCTCGA+AGG 0.583979 7_4:-11588298 Msa1140220:CDS
TGAGTAACCAAACCTGTTTG+CGG 0.587231 7_4:+11597703 None:intergenic
GGAAGCAGTCAGTGGGACCA+TGG 0.589203 7_4:-11591995 Msa1140220:CDS
ATCTTGTACAAGATTACCAA+AGG 0.589586 7_4:+11587329 None:intergenic
ATTAATGCAACTGATTTGAG+AGG 0.591119 7_4:-11588199 Msa1140220:CDS
AGCCAGCCTTATCTATGACC+AGG 0.594107 7_4:-11592699 Msa1140220:intron
TTCTGCAGCAAGCTCAATAG+GGG 0.596919 7_4:+11587578 None:intergenic
AGATTGATCGAGAAAGTAGG+TGG 0.598984 7_4:-11591610 Msa1140220:CDS
AGTGAAGGAAAAGTTCATCC+AGG 0.603171 7_4:-11589087 Msa1140220:CDS
TTGGTCTGAGTCAAGAGCAC+TGG 0.603439 7_4:-11587274 Msa1140220:three_prime_UTR
AAGCGTTCGTCAAACTTAAG+GGG 0.604023 7_4:-11591352 Msa1140220:CDS
GGAAAAGTTCATCCAGGCAA+AGG 0.607228 7_4:-11589081 Msa1140220:intron
CACCCTTCGAGATTGACCAT+CGG 0.607292 7_4:+11588295 None:intergenic
TGATGCCCAATCTGGTTCAG+GGG 0.609198 7_4:+11590410 None:intergenic
TGAGCTCTCAGATTCCTGAA+AGG 0.609711 7_4:-11590752 Msa1140220:CDS
CCATCCTCATCCACAGCTCG+AGG 0.615689 7_4:+11587606 None:intergenic
CACCTGGTCATAGATAAGGC+TGG 0.616998 7_4:+11592697 None:intergenic
GCTAGAGAATCATATTGACC+AGG 0.617472 7_4:+11589110 None:intergenic
TGTAGCTACTGCCCTAGAAG+AGG 0.617795 7_4:-11592282 Msa1140220:intron
AGCCGATGGTCAATCTCGAA+GGG 0.620302 7_4:-11588297 Msa1140220:CDS
AGCGTTCGTCAAACTTAAGG+GGG 0.621606 7_4:-11591351 Msa1140220:CDS
TCTTGTACAAGATTACCAAA+GGG 0.622439 7_4:+11587330 None:intergenic
GCAGTCAACATTCTGGTCAG+AGG 0.624182 7_4:-11591135 Msa1140220:CDS
TACTAAAGAAGGCCAGCCGA+TGG 0.624826 7_4:-11588311 Msa1140220:CDS
AATGGAGCCGTACATTAACC+AGG 0.628214 7_4:-11591849 Msa1140220:intron
GAACAGGCAAACAATGATCA+CGG 0.629231 7_4:-11588394 Msa1140220:CDS
TTCCAGGGAAGGACTTGGAG+AGG 0.629726 7_4:-11595223 Msa1140220:intron
GTAATAATCCAGTAATACAA+AGG 0.630092 7_4:+11587096 None:intergenic
TTACATTGGACGTTAAGGTG+TGG 0.632129 7_4:-11589390 Msa1140220:CDS
GTTCACAGTGTGATGAGCAA+CGG 0.632589 7_4:+11591027 None:intergenic
AACTGCAGACATTGGAATGG+TGG 0.635357 7_4:-11588248 Msa1140220:CDS
TATTTGCGCCATATTGCAGG+AGG 0.636613 7_4:+11588221 None:intergenic
AAGAGACAGAGAAACAACGT+TGG 0.636811 7_4:+11597949 None:intergenic
TCTTTGGTGAAACAGATACA+GGG 0.637338 7_4:-11596146 Msa1140220:intron
AAGTTCCTCCCAGACAGAGT+TGG 0.637874 7_4:+11589321 None:intergenic
ATCACGGCCCTAATTTGGCA+GGG 0.637982 7_4:-11588378 Msa1140220:CDS
GTAATGTAAAATGACTGCAT+TGG 0.638084 7_4:-11587293 Msa1140220:three_prime_UTR
GGTGAAACAGATACAGGGCA+TGG 0.643702 7_4:-11596141 Msa1140220:intron
TCTGTTGTGCTACTAAGAGT+CGG 0.644075 7_4:+11588551 None:intergenic
CTCCAAAAGCTACACTGATG+GGG 0.644943 7_4:+11595139 None:intergenic
AATAGTTTACCTGTGATCGA+AGG 0.645214 7_4:+11594688 None:intergenic
TGATAAATGTGCTGATTGTG+GGG 0.646145 7_4:-11590433 Msa1140220:CDS
ACCAAGGTTTCGATGAACAC+CGG 0.647700 7_4:+11590353 None:intergenic
GTAATGCAGAATGCTGCCAA+GGG 0.652738 7_4:-11591506 Msa1140220:CDS
GACAGATTGATCGAGAAAGT+AGG 0.661266 7_4:-11591613 Msa1140220:CDS
TGAAACTGCAGACATTGGAA+TGG 0.673767 7_4:-11588251 Msa1140220:CDS
CATCCGAATTAACAATGTAG+CGG 0.674705 7_4:+11588488 None:intergenic
CCTTTGATATGTGCACACCA+AGG 0.680873 7_4:+11590337 None:intergenic
AGGGACAAGATCAACCTGAA+AGG 0.685935 7_4:+11589282 None:intergenic
AATCTGAGAGCTCAGCAATG+AGG 0.686046 7_4:+11590761 None:intergenic
TCTTTGTTGGTGAAATGATG+CGG 0.687553 7_4:+11590948 None:intergenic
TAGGTTCAGACTATTCGACA+AGG 0.690633 7_4:-11591385 Msa1140220:CDS
ATTTGCCAACTCTGTCTGGG+AGG 0.691509 7_4:-11589326 Msa1140220:CDS
GATTGATCGAGAAAGTAGGT+GGG 0.696174 7_4:-11591609 Msa1140220:CDS
GCGTTCGTCAAACTTAAGGG+GGG 0.699525 7_4:-11591350 Msa1140220:CDS
TAGTGAATTTGGTCATAACA+GGG 0.703666 7_4:+11594745 None:intergenic
GAAACAGATACAGGGCATGG+AGG 0.706928 7_4:-11596138 Msa1140220:intron
TACTTTCTTCAACAGCACAG+TGG 0.722434 7_4:+11590574 None:intergenic
AGTAGCACAACAGATCTGGG+AGG 0.753828 7_4:-11588542 Msa1140220:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTTAAAAAATTAATTT+TGG - chr7_4:11587493-11587512 Msa1140220:three_prime_UTR 0.0%
!!! TTTTTAGTTAAAACTTAAAA+GGG + chr7_4:11589308-11589327 None:intergenic 10.0%
!!! ATTTTTAGTTAAAACTTAAA+AGG + chr7_4:11589309-11589328 None:intergenic 10.0%
!!! ATATATTATATTTCTATGTT+TGG + chr7_4:11590748-11590767 None:intergenic 10.0%
!! TAATATTAGTAAACATTATT+AGG + chr7_4:11591080-11591099 None:intergenic 10.0%
!! TAATAATGTTTACTAATATT+AGG - chr7_4:11591079-11591098 Msa1140220:CDS 10.0%
!! TTCTATAAAAAATAATATCA+TGG - chr7_4:11591473-11591492 Msa1140220:intron 10.0%
!! TCTATAAAAAATAATATCAT+GGG - chr7_4:11591474-11591493 Msa1140220:intron 10.0%
!! TAAGTTTCATAATTTATATA+TGG - chr7_4:11592338-11592357 Msa1140220:intron 10.0%
!!! TTATTTTTCTTTATCATTTT+AGG - chr7_4:11593710-11593729 Msa1140220:intron 10.0%
!!! TTTTTTAATATTAACTTTAG+TGG - chr7_4:11595113-11595132 Msa1140220:intron 10.0%
!! TTAAAGAAAAAATAATACTT+TGG + chr7_4:11595490-11595509 None:intergenic 10.0%
!! TAAAATATAACAACAATAAT+GGG + chr7_4:11595900-11595919 None:intergenic 10.0%
!! TTAAAATATAACAACAATAA+TGG + chr7_4:11595901-11595920 None:intergenic 10.0%
!! TTAATATATGTGAAAATATA+AGG - chr7_4:11597413-11597432 Msa1140220:intron 10.0%
!! TATCTTATATATAATATACT+TGG + chr7_4:11597642-11597661 None:intergenic 10.0%
!! AAGAAAAAAAACTTAAATCA+AGG + chr7_4:11587614-11587633 None:intergenic 15.0%
!! AATATGAATTTACATATCTT+TGG + chr7_4:11588341-11588360 None:intergenic 15.0%
!! CTAATAAAATTATTTGTGAA+TGG - chr7_4:11588738-11588757 Msa1140220:intron 15.0%
!!! ATCAATAAATTTTGATAATG+AGG + chr7_4:11589083-11589102 None:intergenic 15.0%
!! ATATTATTTGTTTATCTTTC+AGG - chr7_4:11589544-11589563 Msa1140220:intron 15.0%
!!! TAGCAGTTTTTAATAAAAAA+TGG + chr7_4:11590135-11590154 None:intergenic 15.0%
!! TAAGTAAATTAATTCTTCAT+CGG - chr7_4:11591956-11591975 Msa1140220:intron 15.0%
!!! TATATATGGATTTGTTATAA+TGG - chr7_4:11592352-11592371 Msa1140220:intron 15.0%
!! TTAAAAAAATAAATGCTTCA+AGG + chr7_4:11592658-11592677 None:intergenic 15.0%
!! AAAGATTAAAATAAACCAAT+GGG + chr7_4:11593692-11593711 None:intergenic 15.0%
!! TAAAGATTAAAATAAACCAA+TGG + chr7_4:11593693-11593712 None:intergenic 15.0%
!! ATAACATATACAATGATAAA+GGG + chr7_4:11594822-11594841 None:intergenic 15.0%
!! TATAACATATACAATGATAA+AGG + chr7_4:11594823-11594842 None:intergenic 15.0%
!!! CATTTTGAAACAAATTTTTT+TGG + chr7_4:11595386-11595405 None:intergenic 15.0%
!! TAGACATTTAAAAAATATGT+TGG + chr7_4:11596398-11596417 None:intergenic 15.0%
!! TTAAGAAGAAAAATTCAAAT+GGG + chr7_4:11597166-11597185 None:intergenic 15.0%
!! TTTAAGAAGAAAAATTCAAA+TGG + chr7_4:11597167-11597186 None:intergenic 15.0%
!!! TTTAATGTATCTAAAATTAG+AGG + chr7_4:11597377-11597396 None:intergenic 15.0%
!!! ATGTTTTTTTGTTTTGTTTA+AGG - chr7_4:11597708-11597727 Msa1140220:intron 15.0%
!!! TCATATTTTCAAACTATGAT+AGG - chr7_4:11587725-11587744 Msa1140220:intron 20.0%
!! TATGTAAATTCATATTTCAC+AGG - chr7_4:11588345-11588364 Msa1140220:CDS 20.0%
!!! AGATTTTATTTACCAAAAGT+GGG + chr7_4:11588546-11588565 None:intergenic 20.0%
!!! TAGATTTTATTTACCAAAAG+TGG + chr7_4:11588547-11588566 None:intergenic 20.0%
!! AAATAAAATCTAACACAGAT+AGG - chr7_4:11588555-11588574 Msa1140220:CDS 20.0%
!!! AAATAATTTTATTAGCCTAC+AGG + chr7_4:11588733-11588752 None:intergenic 20.0%
!! ATAAAATTATTTGTGAATGG+TGG - chr7_4:11588741-11588760 Msa1140220:intron 20.0%
!! ATAAAATCTCAAACAATTAG+GGG + chr7_4:11588861-11588880 None:intergenic 20.0%
!! CATAAAATCTCAAACAATTA+GGG + chr7_4:11588862-11588881 None:intergenic 20.0%
!! ACATAAAATCTCAAACAATT+AGG + chr7_4:11588863-11588882 None:intergenic 20.0%
!!! AGAAGTTTGAAATTTTACAA+GGG - chr7_4:11589022-11589041 Msa1140220:intron 20.0%
!! TTAAGAAAGTTAAAACACTA+AGG + chr7_4:11589351-11589370 None:intergenic 20.0%
!! TAAGTAGTTTCAAAATTCAA+AGG + chr7_4:11589384-11589403 None:intergenic 20.0%
!!! ATTTATTTTCAACTTTACTG+AGG - chr7_4:11589569-11589588 Msa1140220:intron 20.0%
!!! TCTATTTTAAATGCGTTATT+GGG + chr7_4:11590495-11590514 None:intergenic 20.0%
!! AAAATAGAGAGAAATTGAAA+AGG - chr7_4:11590507-11590526 Msa1140220:CDS 20.0%
!! ATATTTAGCAGTAAACTATT+TGG - chr7_4:11590676-11590695 Msa1140220:intron 20.0%
!! ATAGAATATGATTACACAAT+AGG - chr7_4:11590790-11590809 Msa1140220:CDS 20.0%
!! AATAAGTTACTAGATAAATG+GGG + chr7_4:11590929-11590948 None:intergenic 20.0%
!! GAATAAGTTACTAGATAAAT+GGG + chr7_4:11590930-11590949 None:intergenic 20.0%
!! AGAATAAGTTACTAGATAAA+TGG + chr7_4:11590931-11590950 None:intergenic 20.0%
!!! TTGTATATTTCTAAAGTAGT+AGG - chr7_4:11591294-11591313 Msa1140220:CDS 20.0%
!!! TTGTTTCTTTGTTTAGATTT+AGG - chr7_4:11591367-11591386 Msa1140220:CDS 20.0%
!!! TGTTTCTTTGTTTAGATTTA+GGG - chr7_4:11591368-11591387 Msa1140220:CDS 20.0%
!! ATAAAAAATAATATCATGGG+TGG - chr7_4:11591477-11591496 Msa1140220:intron 20.0%
!! TGCTAATAGTTTATTAGTAA+AGG + chr7_4:11591909-11591928 None:intergenic 20.0%
!! TAAACATGACACTTAATATT+AGG - chr7_4:11592013-11592032 Msa1140220:CDS 20.0%
!! CAAAACATTGAAGAAATTAT+TGG - chr7_4:11592135-11592154 Msa1140220:intron 20.0%
!! TGGAAGTTTATGTTATATTA+AGG - chr7_4:11593325-11593344 Msa1140220:intron 20.0%
!! GGAAGTTTATGTTATATTAA+GGG - chr7_4:11593326-11593345 Msa1140220:intron 20.0%
!!! AAATTTGTTACAAAGAAACA+TGG + chr7_4:11593917-11593936 None:intergenic 20.0%
!! AATTTCATCTGATATTATTG+TGG - chr7_4:11593932-11593951 Msa1140220:intron 20.0%
!!! TTTTAGTTCATTGTAAAAGT+TGG + chr7_4:11595042-11595061 None:intergenic 20.0%
!! AAAATTATGCATGTTCAAAT+TGG - chr7_4:11595216-11595235 Msa1140220:CDS 20.0%
!! GAGTATCAAATAAGATATTT+CGG + chr7_4:11595334-11595353 None:intergenic 20.0%
!! GTAACATAGTATTAATTGAA+GGG + chr7_4:11595460-11595479 None:intergenic 20.0%
!! TGTAACATAGTATTAATTGA+AGG + chr7_4:11595461-11595480 None:intergenic 20.0%
!! AAATTATCCTAATCAACTAT+TGG + chr7_4:11595524-11595543 None:intergenic 20.0%
!! AATAGTTGATTAGGATAATT+TGG - chr7_4:11595523-11595542 Msa1140220:intron 20.0%
!! AAAAAATATACCAATTGAGA+GGG + chr7_4:11595677-11595696 None:intergenic 20.0%
!! AAAAAAATATACCAATTGAG+AGG + chr7_4:11595678-11595697 None:intergenic 20.0%
!! AAAAATCAATAGTACTTTAC+AGG + chr7_4:11596114-11596133 None:intergenic 20.0%
!!! TGTAAAGTACTATTGATTTT+TGG - chr7_4:11596113-11596132 Msa1140220:CDS 20.0%
!!! TAACTTTATGTAATGGTTTT+TGG - chr7_4:11597014-11597033 Msa1140220:intron 20.0%
!! AAAAATAAACCAATGTACAT+AGG + chr7_4:11597971-11597990 None:intergenic 20.0%
! TGTTAAATTGACATAAACCT+AGG - chr7_4:11587325-11587344 Msa1140220:three_prime_UTR 25.0%
! TTGTATGTGTAATGAATGTA+AGG - chr7_4:11587518-11587537 Msa1140220:exon 25.0%
! AATGTAAGGTGAATTTCATA+GGG - chr7_4:11587532-11587551 Msa1140220:CDS 25.0%
!!! TTAGTGTTTGTTTTGTTCTA+AGG - chr7_4:11587822-11587841 Msa1140220:intron 25.0%
!! TAAGGAAAGTTTGAAATTGA+TGG - chr7_4:11587840-11587859 Msa1140220:intron 25.0%
!! AAGGAAAGTTTGAAATTGAT+GGG - chr7_4:11587841-11587860 Msa1140220:intron 25.0%
! CTATGAACTAAATAACCTAT+TGG + chr7_4:11588204-11588223 None:intergenic 25.0%
! ATAAGGATAAATTCAGCTAT+AGG + chr7_4:11588380-11588399 None:intergenic 25.0%
! GTAACAGCATGTTTAATATA+AGG + chr7_4:11588397-11588416 None:intergenic 25.0%
! AAATCAAATGTACGATAAAC+AGG + chr7_4:11588422-11588441 None:intergenic 25.0%
! TCGTTGAAATGATAAAATCT+TGG - chr7_4:11588479-11588498 Msa1140220:CDS 25.0%
! CGTTGAAATGATAAAATCTT+GGG - chr7_4:11588480-11588499 Msa1140220:CDS 25.0%
! TGTCAGAATATTGTATTTGT+AGG - chr7_4:11588893-11588912 Msa1140220:intron 25.0%
!!! TTGTCTGTCTTTTAATTCTT+TGG - chr7_4:11588952-11588971 Msa1140220:intron 25.0%
!!! GAGAAGTTTGAAATTTTACA+AGG - chr7_4:11589021-11589040 Msa1140220:intron 25.0%
!!! GTTTTTTTCTTTTCAACTGT+TGG - chr7_4:11589204-11589223 Msa1140220:intron 25.0%
! AGTTTCAAAATTCAAAGGTT+TGG + chr7_4:11589379-11589398 None:intergenic 25.0%
! AACTTATGATCACATCAATA+TGG + chr7_4:11589454-11589473 None:intergenic 25.0%
!! CTTGATTTTTACTCAAGATT+TGG + chr7_4:11589605-11589624 None:intergenic 25.0%
! AATCTTGAGTAAAAATCAAG+AGG - chr7_4:11589605-11589624 Msa1140220:intron 25.0%
!!! AATCAAGAGGTTTTTTTATG+AGG - chr7_4:11589618-11589637 Msa1140220:intron 25.0%
!! AAAATTTTCCTTTCGATGAT+GGG + chr7_4:11589737-11589756 None:intergenic 25.0%
!! TAAAATTTTCCTTTCGATGA+TGG + chr7_4:11589738-11589757 None:intergenic 25.0%
!!! ATCGAAAGGAAAATTTTAGT+GGG - chr7_4:11589740-11589759 Msa1140220:intron 25.0%
! AAAGTAAAATGACAGCATTT+AGG + chr7_4:11589873-11589892 None:intergenic 25.0%
! ATCTATTAAGAAAGACATTG+AGG + chr7_4:11590112-11590131 None:intergenic 25.0%
! ACATCATGATAATCAAATCA+TGG + chr7_4:11590281-11590300 None:intergenic 25.0%
! TCTTAATGCTATAGTGAATT+TGG + chr7_4:11590383-11590402 None:intergenic 25.0%
! ACTATAGCATTAAGAGAAAT+CGG - chr7_4:11590388-11590407 Msa1140220:CDS 25.0%
!!! CTCTATTTTAAATGCGTTAT+TGG + chr7_4:11590496-11590515 None:intergenic 25.0%
! TCTTCATTCATCCAAAAAAA+AGG - chr7_4:11590560-11590579 Msa1140220:CDS 25.0%
! TTCATCCAAAAAAAAGGAAA+AGG - chr7_4:11590566-11590585 Msa1140220:CDS 25.0%
! CTAAATATTGTAATGTGGTT+CGG + chr7_4:11590664-11590683 None:intergenic 25.0%
! TACTGCTAAATATTGTAATG+TGG + chr7_4:11590669-11590688 None:intergenic 25.0%
!! TATATTTCTATGTTTGGTAC+CGG + chr7_4:11590742-11590761 None:intergenic 25.0%
! TTATTAGCCAGCAATTATTA+TGG + chr7_4:11591046-11591065 None:intergenic 25.0%
!!! TAAACTTTGCTTTAGTTTGT+AGG + chr7_4:11591248-11591267 None:intergenic 25.0%
!!! TTGTTTAGATTTAGGGTTTT+AGG - chr7_4:11591375-11591394 Msa1140220:CDS 25.0%
! TTCTTGTGATCATAACAAAT+AGG - chr7_4:11591678-11591697 Msa1140220:CDS 25.0%
! GAGAGAATATATTCTGATAT+GGG + chr7_4:11591727-11591746 None:intergenic 25.0%
! AGAGAGAATATATTCTGATA+TGG + chr7_4:11591728-11591747 None:intergenic 25.0%
! AAACTATTAGCAGAATAGTT+AGG - chr7_4:11591917-11591936 Msa1140220:intron 25.0%
!!! TTTTCCATTTCTGAAGTTTT+TGG - chr7_4:11592228-11592247 Msa1140220:intron 25.0%
!!! TTTCCATTTCTGAAGTTTTT+GGG - chr7_4:11592229-11592248 Msa1140220:intron 25.0%
!! TTGATAGTCTATAGAAACTT+TGG + chr7_4:11592262-11592281 None:intergenic 25.0%
! TTCTATAGACTATCAAAACT+AGG - chr7_4:11592266-11592285 Msa1140220:intron 25.0%
! ACTCTTACAAAATCTTAACA+TGG + chr7_4:11592302-11592321 None:intergenic 25.0%
!! ATTATAAAGCATTTGGAGAT+AGG + chr7_4:11592447-11592466 None:intergenic 25.0%
!! CGACAAAATTATAAAGCATT+TGG + chr7_4:11592454-11592473 None:intergenic 25.0%
!! CAAATCCAAATTTTAAACTC+AGG + chr7_4:11592495-11592514 None:intergenic 25.0%
!!! TTTTTTAACAATTTACCCCT+TGG - chr7_4:11592670-11592689 Msa1140220:intron 25.0%
! TTAAAAAATCCAATACCAAG+GGG + chr7_4:11592688-11592707 None:intergenic 25.0%
! GTTAAAAAATCCAATACCAA+GGG + chr7_4:11592689-11592708 None:intergenic 25.0%
! TGTTAAAAAATCCAATACCA+AGG + chr7_4:11592690-11592709 None:intergenic 25.0%
!!! TTTGCAGTTTTGAATATTGT+AGG + chr7_4:11592725-11592744 None:intergenic 25.0%
!!! AAAGAAGAGATTTGAGTTTT+TGG - chr7_4:11593098-11593117 Msa1140220:intron 25.0%
! TTTGATTCATTTCACTTGTA+GGG - chr7_4:11593224-11593243 Msa1140220:intron 25.0%
! GTATGAACTATTACATCAAA+TGG - chr7_4:11593247-11593266 Msa1140220:intron 25.0%
!! TTTTAAACCTGGTTAATGTA+CGG + chr7_4:11593275-11593294 None:intergenic 25.0%
!! TTTTAAACCCTTTAATTACG+TGG - chr7_4:11593305-11593324 Msa1140220:intron 25.0%
! TAAACTTCCACGTAATTAAA+GGG + chr7_4:11593315-11593334 None:intergenic 25.0%
! ATAAACTTCCACGTAATTAA+AGG + chr7_4:11593316-11593335 None:intergenic 25.0%
! AGTTTATGTTATATTAAGGG+TGG - chr7_4:11593329-11593348 Msa1140220:intron 25.0%
! GTTTAATGTGAACAATAAGT+TGG - chr7_4:11593871-11593890 Msa1140220:intron 25.0%
!! AATAGTGTTTTATCCGTATA+AGG - chr7_4:11594223-11594242 Msa1140220:intron 25.0%
! CTTTAATCACAATCCTTATA+CGG + chr7_4:11594239-11594258 None:intergenic 25.0%
!!! TTTTTTCAATCCAATCCATT+TGG + chr7_4:11594318-11594337 None:intergenic 25.0%
!!! TGGTTTTTCACTTTTATTAC+AGG + chr7_4:11594632-11594651 None:intergenic 25.0%
! TTTAGTGGTTAAAACTGTAA+TGG - chr7_4:11595128-11595147 Msa1140220:intron 25.0%
! TGTTCAAATTGGTTGTTTAT+AGG - chr7_4:11595227-11595246 Msa1140220:intron 25.0%
! GTTCAAATTGGTTGTTTATA+GGG - chr7_4:11595228-11595247 Msa1140220:intron 25.0%
! AAACAAACCAATAGTTGATT+AGG - chr7_4:11595514-11595533 Msa1140220:intron 25.0%
! TGAAATAAAGTTATCACAGA+AGG + chr7_4:11595753-11595772 None:intergenic 25.0%
!! ATAACTTTATTTCAGTCTCT+TGG - chr7_4:11595759-11595778 Msa1140220:intron 25.0%
!! TAACTTTATTTCAGTCTCTT+GGG - chr7_4:11595760-11595779 Msa1140220:intron 25.0%
! AGTAATGCAAAGATAATAGT+GGG + chr7_4:11595873-11595892 None:intergenic 25.0%
! AAGTAATGCAAAGATAATAG+TGG + chr7_4:11595874-11595893 None:intergenic 25.0%
! TTGGAAAATCAAAATCTGAT+TGG - chr7_4:11596132-11596151 Msa1140220:CDS 25.0%
!! TCAAAATCTGATTGGATTTT+TGG - chr7_4:11596140-11596159 Msa1140220:intron 25.0%
!!! ATTGGATTTTTGGAAAATGA+TGG - chr7_4:11596150-11596169 Msa1140220:intron 25.0%
! GAAACTGAAGAAAATGATAT+AGG - chr7_4:11596235-11596254 Msa1140220:intron 25.0%
! TTAAAAAATATGTTGGCAGA+GGG + chr7_4:11596391-11596410 None:intergenic 25.0%
! TTTAAAAAATATGTTGGCAG+AGG + chr7_4:11596392-11596411 None:intergenic 25.0%
!!! TTCTGTTTTTTTAAATCCCT+TGG - chr7_4:11596493-11596512 Msa1140220:intron 25.0%
! TTCTTGTAATAGCATTACTT+TGG + chr7_4:11596703-11596722 None:intergenic 25.0%
! TTCTAATTGCTCTATGAATT+TGG - chr7_4:11596776-11596795 Msa1140220:intron 25.0%
! TCAAATGGGACTTATATTTA+GGG + chr7_4:11597152-11597171 None:intergenic 25.0%
! TTCAAATGGGACTTATATTT+AGG + chr7_4:11597153-11597172 None:intergenic 25.0%
! AACACATCTATATACATGAA+AGG - chr7_4:11597287-11597306 Msa1140220:intron 25.0%
! ACACATCTATATACATGAAA+GGG - chr7_4:11597288-11597307 Msa1140220:intron 25.0%
!!! ATATACATGAAAGGGTATTT+TGG - chr7_4:11597296-11597315 Msa1140220:intron 25.0%
! ACTAGTATGAAGAGTTAAAA+AGG - chr7_4:11597738-11597757 Msa1140220:CDS 25.0%
! AACATTACTAAATTGTTGCT+TGG + chr7_4:11597879-11597898 None:intergenic 25.0%
!!! CATTGGTTTATTTTTGTGAA+AGG - chr7_4:11597976-11597995 Msa1140220:five_prime_UTR 25.0%
!!! TTTTTTCACCTTTGTATTAC+TGG - chr7_4:11598010-11598029 Msa1140220:five_prime_UTR 25.0%
! GTAATAATCCAGTAATACAA+AGG + chr7_4:11598021-11598040 None:intergenic 25.0%
! TGTATTACTGGATTATTACT+TGG - chr7_4:11598022-11598041 Msa1140220:five_prime_UTR 25.0%
!!! ACTTTCACTGGTTTTGAATT+TGG + chr7_4:11587240-11587259 None:intergenic 30.0%
!!! TTCACTTTTTTCACTTTCAC+TGG + chr7_4:11587252-11587271 None:intergenic 30.0%
CTCAAAAAACGATAATTCCT+AGG + chr7_4:11587345-11587364 None:intergenic 30.0%
!!! CTAGGAATTATCGTTTTTTG+AGG - chr7_4:11587343-11587362 Msa1140220:three_prime_UTR 30.0%
GAATGTAAGGTGAATTTCAT+AGG - chr7_4:11587531-11587550 Msa1140220:CDS 30.0%
TTGTATATGTCAGTGTTTCA+TGG - chr7_4:11587795-11587814 Msa1140220:intron 30.0%
TGTATATGTCAGTGTTTCAT+GGG - chr7_4:11587796-11587815 Msa1140220:intron 30.0%
! AGGAAAGTTTGAAATTGATG+GGG - chr7_4:11587842-11587861 Msa1140220:intron 30.0%
!! TGCTTGTTGTAGATGATAAA+TGG - chr7_4:11587873-11587892 Msa1140220:intron 30.0%
!!! ATCAAGGGTTACTTTTGATT+CGG - chr7_4:11587968-11587987 Msa1140220:intron 30.0%
TCATGCAAATAAAAAGGAAG+TGG - chr7_4:11587996-11588015 Msa1140220:intron 30.0%
! AATTGCTATTGTTCTCCAAT+AGG - chr7_4:11588186-11588205 Msa1140220:CDS 30.0%
! ACAATTTTATTCCTGTGTTG+TGG + chr7_4:11588300-11588319 None:intergenic 30.0%
AAAATTGTTACTCCCAATAC+TGG - chr7_4:11588312-11588331 Msa1140220:CDS 30.0%
! TATCTTTGGTTTCCAGTATT+GGG + chr7_4:11588327-11588346 None:intergenic 30.0%
! ATATCTTTGGTTTCCAGTAT+TGG + chr7_4:11588328-11588347 None:intergenic 30.0%
!! AGCAGTATTTTTGCAGTTTA+CGG + chr7_4:11588446-11588465 None:intergenic 30.0%
! TAAATAGCCATGAACTTTTG+TGG - chr7_4:11589102-11589121 Msa1140220:CDS 30.0%
!!! GGAAAGAATTTTGGAATTTG+TGG + chr7_4:11589504-11589523 None:intergenic 30.0%
! CATCTGAAAGGAAAGAATTT+TGG + chr7_4:11589513-11589532 None:intergenic 30.0%
TTTGTGTATTCTATTCTCCA+TGG - chr7_4:11589672-11589691 Msa1140220:intron 30.0%
! CATCGAAAGGAAAATTTTAG+TGG - chr7_4:11589739-11589758 Msa1140220:intron 30.0%
!!! GGAAAATTTTAGTGGGTTAA+TGG - chr7_4:11589747-11589766 Msa1140220:intron 30.0%
ATGCTTAAGATGGTTAATGA+AGG - chr7_4:11590024-11590043 Msa1140220:intron 30.0%
TGCTTAAGATGGTTAATGAA+GGG - chr7_4:11590025-11590044 Msa1140220:intron 30.0%
TTGACTAATGTTATCTGTCA+AGG - chr7_4:11590182-11590201 Msa1140220:intron 30.0%
TAGTGAATTTGGTCATAACA+GGG + chr7_4:11590372-11590391 None:intergenic 30.0%
ATAGTGAATTTGGTCATAAC+AGG + chr7_4:11590373-11590392 None:intergenic 30.0%
CTATAGCATTAAGAGAAATC+GGG - chr7_4:11590389-11590408 Msa1140220:CDS 30.0%
AATGAAGAATAGAGAGTGAT+TGG + chr7_4:11590548-11590567 None:intergenic 30.0%
! GACTACCTTTTCCTTTTTTT+TGG + chr7_4:11590574-11590593 None:intergenic 30.0%
ACTGTCAAAGCATAATACTT+AGG - chr7_4:11590636-11590655 Msa1140220:CDS 30.0%
CTGTCAAAGCATAATACTTA+GGG - chr7_4:11590637-11590656 Msa1140220:CDS 30.0%
TGTCAAAGCATAATACTTAG+GGG - chr7_4:11590638-11590657 Msa1140220:CDS 30.0%
! TTTGGAAATGGATATTGGTT+GGG + chr7_4:11590876-11590895 None:intergenic 30.0%
TTTCGTTTGGAAATGGATAT+TGG + chr7_4:11590881-11590900 None:intergenic 30.0%
ATGTGCAACAGTTATGTATT+AGG + chr7_4:11591021-11591040 None:intergenic 30.0%
CACATTACCATAATAATTGC+TGG - chr7_4:11591036-11591055 Msa1140220:CDS 30.0%
GCAAATCAATATTGACAAAC+TGG + chr7_4:11591165-11591184 None:intergenic 30.0%
!! TATTGATTTGCAAGAAGTCA+AGG - chr7_4:11591174-11591193 Msa1140220:intron 30.0%
TATATTATCCCAACAGCTAT+TGG - chr7_4:11591534-11591553 Msa1140220:CDS 30.0%
ATATTATCCCAACAGCTATT+GGG - chr7_4:11591535-11591554 Msa1140220:CDS 30.0%
! CAACAAAGCACATTTTATGA+TGG + chr7_4:11591876-11591895 None:intergenic 30.0%
TATTAGCAGAATAGTTAGGA+GGG - chr7_4:11591921-11591940 Msa1140220:intron 30.0%
!! GATGTATTTGAGAAGTATCA+AGG - chr7_4:11592101-11592120 Msa1140220:intron 30.0%
! TTCCTCCTGAGTTTAAAATT+TGG - chr7_4:11592487-11592506 Msa1140220:intron 30.0%
! ATCCAAATTTTAAACTCAGG+AGG + chr7_4:11592492-11592511 None:intergenic 30.0%
GGCAATCATTAGAGAAAAAA+CGG + chr7_4:11592749-11592768 None:intergenic 30.0%
AAGTTTCTTTCACTGAGAAA+AGG - chr7_4:11592797-11592816 Msa1140220:intron 30.0%
! ACATGTTTTGTGCATGATAT+AGG - chr7_4:11592917-11592936 Msa1140220:intron 30.0%
! GAGACTCTTCAAGTTTATTT+GGG + chr7_4:11593045-11593064 None:intergenic 30.0%
! AGAGACTCTTCAAGTTTATT+TGG + chr7_4:11593046-11593065 None:intergenic 30.0%
AATGTTGTGACAAAGACTAT+GGG + chr7_4:11593198-11593217 None:intergenic 30.0%
CTTTGATTCATTTCACTTGT+AGG - chr7_4:11593223-11593242 Msa1140220:intron 30.0%
TTGATTCATTTCACTTGTAG+GGG - chr7_4:11593225-11593244 Msa1140220:intron 30.0%
AGACCTGCAAAATAATTAAC+CGG + chr7_4:11593403-11593422 None:intergenic 30.0%
!! GTTATTTTACTTTCTCCCAT+TGG - chr7_4:11593674-11593693 Msa1140220:intron 30.0%
!! GATTTTTCGTTCTTGATAGT+CGG - chr7_4:11593799-11593818 Msa1140220:intron 30.0%
!! ATTTTTCGTTCTTGATAGTC+GGG - chr7_4:11593800-11593819 Msa1140220:intron 30.0%
CACATTAAACTTCTTACAGA+TGG + chr7_4:11593861-11593880 None:intergenic 30.0%
TTTGTTACAAAGAAACATGG+CGG + chr7_4:11593914-11593933 None:intergenic 30.0%
GATTGGATTGAAAAAATCAC+AGG - chr7_4:11594322-11594341 Msa1140220:intron 30.0%
CTCACTAATTCATTGTTGTA+TGG + chr7_4:11594412-11594431 None:intergenic 30.0%
!! AATGATAAATGTGCTGATTG+TGG - chr7_4:11594679-11594698 Msa1140220:intron 30.0%
!! ATGATAAATGTGCTGATTGT+GGG - chr7_4:11594680-11594699 Msa1140220:intron 30.0%
ACATGTGAATATCATTTGTG+AGG - chr7_4:11594862-11594881 Msa1140220:intron 30.0%
GTTAAGACAAGATACATACA+TGG + chr7_4:11594951-11594970 None:intergenic 30.0%
TGTATGTATCTTGTCTTAAC+TGG - chr7_4:11594951-11594970 Msa1140220:intron 30.0%
GTATGTATCTTGTCTTAACT+GGG - chr7_4:11594952-11594971 Msa1140220:intron 30.0%
TATGTATCTTGTCTTAACTG+GGG - chr7_4:11594953-11594972 Msa1140220:intron 30.0%
!! TTCAAAATGAATGTCGCTTT+CGG - chr7_4:11595397-11595416 Msa1140220:intron 30.0%
ATTGCACACATATTAAGGAA+TGG + chr7_4:11595580-11595599 None:intergenic 30.0%
TTCCTTAATATGTGTGCAAT+TGG - chr7_4:11595580-11595599 Msa1140220:intron 30.0%
!!! TTTTTTCTCCATTCTGTTGT+AGG - chr7_4:11595692-11595711 Msa1140220:intron 30.0%
GTAATGCAAAGATAATAGTG+GGG + chr7_4:11595872-11595891 None:intergenic 30.0%
ATGTGTATATCAGGAATACT+TGG + chr7_4:11595924-11595943 None:intergenic 30.0%
TTAGCGAAAATGTGTATATC+AGG + chr7_4:11595933-11595952 None:intergenic 30.0%
TTAACATAAGCTCTTGCTAA+TGG - chr7_4:11596062-11596081 Msa1140220:intron 30.0%
!! TTTTGGAAAATGATGGAGAA+TGG - chr7_4:11596157-11596176 Msa1140220:intron 30.0%
TGTTGATGTTACACTGAAAA+TGG - chr7_4:11596451-11596470 Msa1140220:intron 30.0%
AAAAACAGAAATATGACTCG+TGG + chr7_4:11596483-11596502 None:intergenic 30.0%
ATTAACAATGTAGCGGTATA+CGG + chr7_4:11596622-11596641 None:intergenic 30.0%
ATACCGCTACATTGTTAATT+CGG - chr7_4:11596623-11596642 Msa1140220:intron 30.0%
TAATAGCATTACTTTGGCAA+GGG + chr7_4:11596697-11596716 None:intergenic 30.0%
AGTAATGCTATTACAAGAAC+AGG - chr7_4:11596704-11596723 Msa1140220:intron 30.0%
TAATTGCTCTATGAATTTGG+TGG - chr7_4:11596779-11596798 Msa1140220:intron 30.0%
AATTGCTCTATGAATTTGGT+GGG - chr7_4:11596780-11596799 Msa1140220:intron 30.0%
!! ATTAATGCAACTGATTTGAG+AGG - chr7_4:11596915-11596934 Msa1140220:intron 30.0%
TTGAGAATACAACGATGTAA+AGG + chr7_4:11596948-11596967 None:intergenic 30.0%
TTACATCGTTGTATTCTCAA+AGG - chr7_4:11596948-11596967 Msa1140220:intron 30.0%
AGTGTGGTAACTTTATGTAA+TGG - chr7_4:11597007-11597026 Msa1140220:intron 30.0%
CACTTTGTAGCATTAATTAG+AGG + chr7_4:11597241-11597260 None:intergenic 30.0%
! ATTAATGCTACAAAGTGTCT+TGG - chr7_4:11597244-11597263 Msa1140220:intron 30.0%
AATATAAGGAGTTCTATCCA+TGG - chr7_4:11597427-11597446 Msa1140220:intron 30.0%
CATCCATTAGAATCATTTGA+TGG + chr7_4:11597592-11597611 None:intergenic 30.0%
ACACTAATAAGAAAACTCTC+TGG - chr7_4:11597612-11597631 Msa1140220:intron 30.0%
TCTTGTACAAGATTACCAAA+GGG + chr7_4:11597787-11597806 None:intergenic 30.0%
ATCTTGTACAAGATTACCAA+AGG + chr7_4:11597788-11597807 None:intergenic 30.0%
GTAATGTAAAATGACTGCAT+TGG - chr7_4:11597821-11597840 Msa1140220:five_prime_UTR 30.0%
TGATGAAGATGTGATACATT+AGG - chr7_4:11597929-11597948 Msa1140220:five_prime_UTR 30.0%
TAAGGTGAATTTCATAGGGT+AGG - chr7_4:11587536-11587555 Msa1140220:CDS 35.0%
AAGGTGAATTTCATAGGGTA+GGG - chr7_4:11587537-11587556 Msa1140220:CDS 35.0%
!! ATTCATGTGTTGGTGATAGT+TGG - chr7_4:11587566-11587585 Msa1140220:CDS 35.0%
TTCAACGTAATCACATGTGT+CGG + chr7_4:11587700-11587719 None:intergenic 35.0%
ACTGACATATACAAGAACAC+CGG + chr7_4:11587789-11587808 None:intergenic 35.0%
! AAAGTTTGAAATTGATGGGG+TGG - chr7_4:11587845-11587864 Msa1140220:intron 35.0%
!! ACTTACTCTAGCTTTGTTTG+TGG - chr7_4:11587938-11587957 Msa1140220:intron 35.0%
TGTTTGTGGCTAAAACATCA+AGG - chr7_4:11587952-11587971 Msa1140220:intron 35.0%
GTTTGTGGCTAAAACATCAA+GGG - chr7_4:11587953-11587972 Msa1140220:intron 35.0%
!!! TCAAGGGTTACTTTTGATTC+GGG - chr7_4:11587969-11587988 Msa1140220:intron 35.0%
GGGAAGTCATGCAAATAAAA+AGG - chr7_4:11587990-11588009 Msa1140220:intron 35.0%
AAACCCTAGTTACCCTAAAA+GGG - chr7_4:11588094-11588113 Msa1140220:intron 35.0%
!! TACTGATTTCTCCTTGTTCA+GGG + chr7_4:11588126-11588145 None:intergenic 35.0%
AAATCAGTACCGTCAAATAG+TGG - chr7_4:11588137-11588156 Msa1140220:CDS 35.0%
ACACTATAGCCACTATTTGA+CGG + chr7_4:11588149-11588168 None:intergenic 35.0%
GGATCAATTGCAGAAAATAG+CGG + chr7_4:11588279-11588298 None:intergenic 35.0%
! AAGCAATGTTATCCCACTTT+TGG - chr7_4:11588531-11588550 Msa1140220:CDS 35.0%
TCAAAATAACCGAACTGACT+TGG + chr7_4:11588583-11588602 None:intergenic 35.0%
GTTTCTTCGTTAAATCATGC+TGG - chr7_4:11588624-11588643 Msa1140220:intron 35.0%
TGGTAGAACGATATGATAAC+TGG - chr7_4:11588705-11588724 Msa1140220:intron 35.0%
ATATGATAACTGGAACCTGT+AGG - chr7_4:11588715-11588734 Msa1140220:intron 35.0%
TGGTGGTTAGAGCTAATTAT+TGG - chr7_4:11588758-11588777 Msa1140220:intron 35.0%
AAGATCAGCATCTATGTTGA+AGG + chr7_4:11588827-11588846 None:intergenic 35.0%
TTCTTTGGTGAAACAGATAC+AGG - chr7_4:11588967-11588986 Msa1140220:intron 35.0%
TCTTTGGTGAAACAGATACA+GGG - chr7_4:11588968-11588987 Msa1140220:intron 35.0%
ACTTCTCTCTCTCAAAGATT+CGG + chr7_4:11589008-11589027 None:intergenic 35.0%
TAGCATAGCATAGAGAGTAA+AGG + chr7_4:11589181-11589200 None:intergenic 35.0%
CTGATGCTGCAACTTATTTA+AGG - chr7_4:11589253-11589272 Msa1140220:intron 35.0%
AAAGCAGTAATACTGCTTAG+TGG - chr7_4:11589648-11589667 Msa1140220:intron 35.0%
TGTATTCTATTCTCCATGGA+GGG - chr7_4:11589676-11589695 Msa1140220:intron 35.0%
AATCATTTCCCATCATCGAA+AGG - chr7_4:11589726-11589745 Msa1140220:intron 35.0%
!!! ATGCTGTCATTTTACTTTCC+AGG - chr7_4:11589875-11589894 Msa1140220:intron 35.0%
!!! TGCTGTCATTTTACTTTCCA+GGG - chr7_4:11589876-11589895 Msa1140220:intron 35.0%
CTTCAACATCATGCTTAAGA+TGG - chr7_4:11590014-11590033 Msa1140220:intron 35.0%
! AAGTAATATTGACTATGCGC+AGG + chr7_4:11590086-11590105 None:intergenic 35.0%
ATCAGAAATTGTTTCACCGT+TGG + chr7_4:11590326-11590345 None:intergenic 35.0%
TGAGTTTCTAACTTCACTGT+AGG - chr7_4:11590346-11590365 Msa1140220:CDS 35.0%
AATAGTTTACCTGTGATCGA+AGG + chr7_4:11590429-11590448 None:intergenic 35.0%
ACTATGTCAACAAAATAGCC+AGG + chr7_4:11590711-11590730 None:intergenic 35.0%
GTTGACATAGTGATAGAAAC+CGG - chr7_4:11590720-11590739 Msa1140220:intron 35.0%
GTTTGGAAATGGATATTGGT+TGG + chr7_4:11590877-11590896 None:intergenic 35.0%
TAGATAAATGGGGAATCTGA+AGG + chr7_4:11590919-11590938 None:intergenic 35.0%
TAGGAAGCAGTTATGTTTCT+AGG + chr7_4:11590964-11590983 None:intergenic 35.0%
!! TAGTTTGCTTTCTTCCTTTC+AGG - chr7_4:11591111-11591130 Msa1140220:CDS 35.0%
CATCTTAATGACAGGGTAAT+AGG + chr7_4:11591225-11591244 None:intergenic 35.0%
TTGTAGGCATCTTAATGACA+GGG + chr7_4:11591232-11591251 None:intergenic 35.0%
TTTGTAGGCATCTTAATGAC+AGG + chr7_4:11591233-11591252 None:intergenic 35.0%
CTATACAGAGCAAAGTGATT+TGG + chr7_4:11591324-11591343 None:intergenic 35.0%
TGCTCTGTATAGAATCTACT+TGG - chr7_4:11591332-11591351 Msa1140220:CDS 35.0%
!!! TAGGGTTTTAGGATTCAAGT+AGG - chr7_4:11591386-11591405 Msa1140220:intron 35.0%
GGATTCAAGTAGGAATTCTT+TGG - chr7_4:11591396-11591415 Msa1140220:intron 35.0%
AATATATTCTGATATGGGCG+TGG + chr7_4:11591722-11591741 None:intergenic 35.0%
CTATTAGCAGAATAGTTAGG+AGG - chr7_4:11591920-11591939 Msa1140220:intron 35.0%
TGACACTTAATATTAGGCAG+AGG - chr7_4:11592019-11592038 Msa1140220:CDS 35.0%
GACACTTAATATTAGGCAGA+GGG - chr7_4:11592020-11592039 Msa1140220:CDS 35.0%
AAGCCCAAAAACTTCAGAAA+TGG + chr7_4:11592235-11592254 None:intergenic 35.0%
!! TGTTTCTTTAGAGCAGATCT+GGG + chr7_4:11592621-11592640 None:intergenic 35.0%
AACAATTTACCCCTTGGTAT+TGG - chr7_4:11592676-11592695 Msa1140220:intron 35.0%
GTCTGCAAGAGTAACAAATT+TGG + chr7_4:11592770-11592789 None:intergenic 35.0%
! AATTTCAGCTGACTCAACAA+GGG + chr7_4:11592875-11592894 None:intergenic 35.0%
TGAGCAAACTCGATTTAATC+TGG - chr7_4:11592965-11592984 Msa1140220:intron 35.0%
ACATCTTCGTTACTTCAAAC+AGG - chr7_4:11593146-11593165 Msa1140220:intron 35.0%
GAATGTTGTGACAAAGACTA+TGG + chr7_4:11593199-11593218 None:intergenic 35.0%
!! AGCAAAGCTGATTTTAAACC+TGG + chr7_4:11593286-11593305 None:intergenic 35.0%
AAATGCAAATGATTCACTGC+CGG - chr7_4:11593381-11593400 Msa1140220:intron 35.0%
CTTATGTGAACTTCTACCAA+TGG + chr7_4:11593576-11593595 None:intergenic 35.0%
!! TTTTTCGTTCTTGATAGTCG+GGG - chr7_4:11593801-11593820 Msa1140220:intron 35.0%
!! ATGGTTTGCTGCATTGTTTA+CGG + chr7_4:11593842-11593861 None:intergenic 35.0%
TCTTCTCATCATCATCATCA+TGG - chr7_4:11594044-11594063 Msa1140220:intron 35.0%
CTTTGATTGTTGATGTAAGC+AGG + chr7_4:11594112-11594131 None:intergenic 35.0%
AGCAAAACCTCAAATCTGAT+TGG + chr7_4:11594145-11594164 None:intergenic 35.0%
! TCTTTGTTGGTGAAATGATG+CGG + chr7_4:11594169-11594188 None:intergenic 35.0%
TGCAAAGTGTAGTTCTTTGT+TGG + chr7_4:11594182-11594201 None:intergenic 35.0%
AACAAAGAACTACACTTTGC+AGG - chr7_4:11594181-11594200 Msa1140220:intron 35.0%
! TGCACTGACAAGCATAATTA+AGG + chr7_4:11594277-11594296 None:intergenic 35.0%
TTAATTATGCTTGTCAGTGC+AGG - chr7_4:11594276-11594295 Msa1140220:intron 35.0%
TATACGAAAGTTACCCTTTC+AGG + chr7_4:11594379-11594398 None:intergenic 35.0%
TTCAAAAGAACTACTCTCAC+TGG + chr7_4:11594506-11594525 None:intergenic 35.0%
ATGTGTTGCGAAGAGTTATT+GGG - chr7_4:11594656-11594675 Msa1140220:intron 35.0%
!! TGATAAATGTGCTGATTGTG+GGG - chr7_4:11594681-11594700 Msa1140220:intron 35.0%
CTTGTTTGCATTGAATGTTC+CGG - chr7_4:11594742-11594761 Msa1140220:CDS 35.0%
! ATAAAGGGTGTGCATTTGTA+TGG + chr7_4:11594807-11594826 None:intergenic 35.0%
CAGACGAGAAATAAAGAACA+GGG + chr7_4:11594988-11595007 None:intergenic 35.0%
!! AAGCGACACTCATTTTGAAA+CGG + chr7_4:11595606-11595625 None:intergenic 35.0%
AGCCAATTGCACACATATTA+AGG + chr7_4:11595585-11595604 None:intergenic 35.0%
!! AAGCGACACTCATTTTGAAA+CGG - chr7_4:11595606-11595625 Msa1140220:intron 35.0%
TTAATTCCTTCCCTCTCAAT+TGG - chr7_4:11595664-11595683 Msa1140220:intron 35.0%
AATATACCAATTGAGAGGGA+AGG + chr7_4:11595673-11595692 None:intergenic 35.0%
GAAAACTGTTTGTGGCTTAT+CGG + chr7_4:11595975-11595994 None:intergenic 35.0%
!! TTGGTGATGAAAACTGTTTG+TGG + chr7_4:11595983-11596002 None:intergenic 35.0%
AGAATCATATTGACCAGGTT+TGG + chr7_4:11596002-11596021 None:intergenic 35.0%
ATATGATTCTCTAGCAGTGA+AGG - chr7_4:11596012-11596031 Msa1140220:intron 35.0%
TGTTAAAGAATACCTTTGCC+TGG + chr7_4:11596048-11596067 None:intergenic 35.0%
CTATTGTCAGAAACAGATTG+TGG - chr7_4:11596213-11596232 Msa1140220:intron 35.0%
ATCTATTTCATGTGATGCCT+AGG + chr7_4:11596276-11596295 None:intergenic 35.0%
! GACCAAGTTGAAAACAAGAA+GGG + chr7_4:11596329-11596348 None:intergenic 35.0%
! AGACCAAGTTGAAAACAAGA+AGG + chr7_4:11596330-11596349 None:intergenic 35.0%
!!! TTCTTGTTTTCAACTTGGTC+TGG - chr7_4:11596329-11596348 Msa1140220:intron 35.0%
CATCCGAATTAACAATGTAG+CGG + chr7_4:11596629-11596648 None:intergenic 35.0%
GTAATAGCATTACTTTGGCA+AGG + chr7_4:11596698-11596717 None:intergenic 35.0%
! AATTTGGTGGGTACTAAAGA+AGG - chr7_4:11596792-11596811 Msa1140220:intron 35.0%
TAATATTTGCGCCATATTGC+AGG + chr7_4:11596899-11596918 None:intergenic 35.0%
!! TTGCAAGATTGCTACTTTCA+AGG - chr7_4:11596982-11597001 Msa1140220:intron 35.0%
! TTTTCACAACTCATGAACCA+TGG + chr7_4:11597447-11597466 None:intergenic 35.0%
! TCTGAAATCTGTAACTATGC+AGG - chr7_4:11597476-11597495 Msa1140220:intron 35.0%
CTGAAATCTGTAACTATGCA+GGG - chr7_4:11597477-11597496 Msa1140220:intron 35.0%
TGAAATCTGTAACTATGCAG+GGG - chr7_4:11597478-11597497 Msa1140220:intron 35.0%
TAGAATCATTTGATGGAGCA+TGG + chr7_4:11597585-11597604 None:intergenic 35.0%
GCTCCATCAAATGATTCTAA+TGG - chr7_4:11597586-11597605 Msa1140220:intron 35.0%
! TGAAGAGTTAAAAAGGTGTG+TGG - chr7_4:11597745-11597764 Msa1140220:exon 35.0%
AAGATGTGATACATTAGGCT+AGG - chr7_4:11597934-11597953 Msa1140220:five_prime_UTR 35.0%
AGATGTGATACATTAGGCTA+GGG - chr7_4:11597935-11597954 Msa1140220:five_prime_UTR 35.0%
TTTGTGCATCCTATGTACAT+TGG - chr7_4:11597959-11597978 Msa1140220:five_prime_UTR 35.0%
TTACTGGATTATTACTTGGC+AGG - chr7_4:11598026-11598045 Msa1140220:five_prime_UTR 35.0%
TACTGGATTATTACTTGGCA+GGG - chr7_4:11598027-11598046 Msa1140220:five_prime_UTR 35.0%
AAGAGACAGAGAAACAACGT+TGG + chr7_4:11587168-11587187 None:intergenic 40.0%
! TCTTTTTCTCTTTCCTCGCT+AGG - chr7_4:11587190-11587209 Msa1140220:three_prime_UTR 40.0%
! CTTTTTCTCTTTCCTCGCTA+GGG - chr7_4:11587191-11587210 Msa1140220:three_prime_UTR 40.0%
AAAAAACAGAAACCCTAGCG+AGG + chr7_4:11587206-11587225 None:intergenic 40.0%
!!! CGCTAGGGTTTCTGTTTTTT+AGG - chr7_4:11587206-11587225 Msa1140220:three_prime_UTR 40.0%
TGAGTAACCAAACCTGTTTG+CGG + chr7_4:11587414-11587433 None:intergenic 40.0%
TCTGTGTTGTGTGTTGTATC+CGG - chr7_4:11587767-11587786 Msa1140220:intron 40.0%
!!! CAAGGGTTACTTTTGATTCG+GGG - chr7_4:11587970-11587989 Msa1140220:intron 40.0%
AGTGAGATTTAGACAGCGTT+TGG - chr7_4:11588031-11588050 Msa1140220:intron 40.0%
!!! CTTTTAGGGTAACTAGGGTT+TGG + chr7_4:11588095-11588114 None:intergenic 40.0%
CAAACCCTAGTTACCCTAAA+AGG - chr7_4:11588093-11588112 Msa1140220:intron 40.0%
!!! AAGCCCTTTTAGGGTAACTA+GGG + chr7_4:11588100-11588119 None:intergenic 40.0%
!!! TAAGCCCTTTTAGGGTAACT+AGG + chr7_4:11588101-11588120 None:intergenic 40.0%
! TCAGGGTTTAAGCCCTTTTA+GGG + chr7_4:11588109-11588128 None:intergenic 40.0%
! TTCAGGGTTTAAGCCCTTTT+AGG + chr7_4:11588110-11588129 None:intergenic 40.0%
!! GTACTGATTTCTCCTTGTTC+AGG + chr7_4:11588127-11588146 None:intergenic 40.0%
CATTTCAACGAAGATGCATC+AGG + chr7_4:11588470-11588489 None:intergenic 40.0%
AACTTTACTGCATTCCTTGC+TGG - chr7_4:11588685-11588704 Msa1140220:intron 40.0%
ATCATATCGTTCTACCAGCA+AGG + chr7_4:11588702-11588721 None:intergenic 40.0%
ATCAGCATCTATGTTGAAGG+TGG + chr7_4:11588824-11588843 None:intergenic 40.0%
GATGCTTCCACAAAAGTTCA+TGG + chr7_4:11589112-11589131 None:intergenic 40.0%
TACTGTACGATGCATCTGAA+AGG + chr7_4:11589525-11589544 None:intergenic 40.0%
GTGTATTCTATTCTCCATGG+AGG - chr7_4:11589675-11589694 Msa1140220:intron 40.0%
!! GTCATTTTACTTTCCAGGGA+AGG - chr7_4:11589880-11589899 Msa1140220:intron 40.0%
TTCCCCTATAATCTTGCCAA+CGG - chr7_4:11590307-11590326 Msa1140220:intron 40.0%
TCACCGTTGGCAAGATTATA+GGG + chr7_4:11590313-11590332 None:intergenic 40.0%
TTCACCGTTGGCAAGATTAT+AGG + chr7_4:11590314-11590333 None:intergenic 40.0%
AAGAGAAATCGGGACATACA+AGG - chr7_4:11590399-11590418 Msa1140220:CDS 40.0%
ATTGGGAGTCATTGGAAACT+AGG + chr7_4:11590478-11590497 None:intergenic 40.0%
AATGCGTTATTGGGAGTCAT+TGG + chr7_4:11590486-11590505 None:intergenic 40.0%
GAAGAATAGAGAGTGATTGG+AGG + chr7_4:11590545-11590564 None:intergenic 40.0%
! ACTATTTGGAACTATCGTCC+TGG - chr7_4:11590690-11590709 Msa1140220:intron 40.0%
GATTACACAATAGGTTCCCA+AGG - chr7_4:11590799-11590818 Msa1140220:CDS 40.0%
CAAGCTCTCTAATTCTTGGA+GGG + chr7_4:11590847-11590866 None:intergenic 40.0%
AGACCAAGCTCTCTAATTCT+TGG + chr7_4:11590851-11590870 None:intergenic 40.0%
!! AGAGGCATTTCGTTTGGAAA+TGG + chr7_4:11590888-11590907 None:intergenic 40.0%
TAACATGTGCTCAACCTGAA+AGG + chr7_4:11591128-11591147 None:intergenic 40.0%
TGGAACATATACTTCCCTTG+TGG - chr7_4:11591416-11591435 Msa1140220:intron 40.0%
!!! TGATGCTGCTTTTTCCACAA+GGG + chr7_4:11591433-11591452 None:intergenic 40.0%
!!! ATGATGCTGCTTTTTCCACA+AGG + chr7_4:11591434-11591453 None:intergenic 40.0%
ATCATGGGTGGATGTTATGT+TGG - chr7_4:11591489-11591508 Msa1140220:intron 40.0%
GACGCTTAATAAGAGACAGA+GGG + chr7_4:11591802-11591821 None:intergenic 40.0%
!! GAGAAGTATCAGACATGTGT+TGG - chr7_4:11592178-11592197 Msa1140220:CDS 40.0%
AATGGATCCTTTCTTAGTGC+AGG - chr7_4:11592370-11592389 Msa1140220:intron 40.0%
AATGCACCTGGTCATAGATA+AGG + chr7_4:11592424-11592443 None:intergenic 40.0%
!! CTGTTTCTTTAGAGCAGATC+TGG + chr7_4:11592622-11592641 None:intergenic 40.0%
ACAAAAGCCTACCTCTTCTA+GGG + chr7_4:11592846-11592865 None:intergenic 40.0%
TACAAAAGCCTACCTCTTCT+AGG + chr7_4:11592847-11592866 None:intergenic 40.0%
! GAATTTCAGCTGACTCAACA+AGG + chr7_4:11592876-11592895 None:intergenic 40.0%
!! AGTTTTTGGAAGCAGTCAGT+GGG - chr7_4:11593112-11593131 Msa1140220:intron 40.0%
!! CTGCCGGTTAATTATTTTGC+AGG - chr7_4:11593397-11593416 Msa1140220:intron 40.0%
ATGCTCAGCAATCAAGAGAA+AGG - chr7_4:11593429-11593448 Msa1140220:intron 40.0%
GACAGATTGATCGAGAAAGT+AGG - chr7_4:11593501-11593520 Msa1140220:intron 40.0%
AGATTGATCGAGAAAGTAGG+TGG - chr7_4:11593504-11593523 Msa1140220:intron 40.0%
GATTGATCGAGAAAGTAGGT+GGG - chr7_4:11593505-11593524 Msa1140220:intron 40.0%
!! TGGGCTTCTAATGGTTCTAA+TGG - chr7_4:11593524-11593543 Msa1140220:intron 40.0%
! GGTTCTAATGGATCTCCTAA+TGG - chr7_4:11593536-11593555 Msa1140220:intron 40.0%
AATGGATCTCCTAATGGAGA+TGG - chr7_4:11593542-11593561 Msa1140220:intron 40.0%
GCTTGTATACCATCTCCATT+AGG + chr7_4:11593554-11593573 None:intergenic 40.0%
! TCTCTTTTCAACCTTTCCCT+TGG + chr7_4:11593627-11593646 None:intergenic 40.0%
TAGGTTCAGACTATTCGACA+AGG - chr7_4:11593729-11593748 Msa1140220:intron 40.0%
CAAGCGTTCGTCAAACTTAA+GGG - chr7_4:11593761-11593780 Msa1140220:intron 40.0%
AAGCGTTCGTCAAACTTAAG+GGG - chr7_4:11593762-11593781 Msa1140220:intron 40.0%
! TGTGGTTTTTAATCACGTGC+AGG - chr7_4:11593950-11593969 Msa1140220:CDS 40.0%
! GTGGTTTTTAATCACGTGCA+GGG - chr7_4:11593951-11593970 Msa1140220:CDS 40.0%
TTCTGGTCAGAGGAATAGTT+CGG - chr7_4:11593989-11594008 Msa1140220:intron 40.0%
TCTCATCATCATCATCATGG+TGG - chr7_4:11594047-11594066 Msa1140220:intron 40.0%
ATGCTGACCAATCAGATTTG+AGG - chr7_4:11594135-11594154 Msa1140220:intron 40.0%
CCATTTCTATCAGTTGTTGC+CGG - chr7_4:11594447-11594466 Msa1140220:intron 40.0%
TACTTTCTTCAACAGCACAG+TGG + chr7_4:11594543-11594562 None:intergenic 40.0%
! ATGTTTTGTGTCTTCACACC+TGG - chr7_4:11594573-11594592 Msa1140220:intron 40.0%
! TTTTATTACAGGATCGCTGC+TGG + chr7_4:11594621-11594640 None:intergenic 40.0%
ACTCTTCGCAACACATCAAT+TGG + chr7_4:11594652-11594671 None:intergenic 40.0%
GATGTGTTGCGAAGAGTTAT+TGG - chr7_4:11594655-11594674 Msa1140220:intron 40.0%
AGATTTAGTGATGCCCAATC+TGG + chr7_4:11594715-11594734 None:intergenic 40.0%
GATTGGGCATCACTAAATCT+TGG - chr7_4:11594715-11594734 Msa1140220:CDS 40.0%
GCAGACGAGAAATAAAGAAC+AGG + chr7_4:11594989-11595008 None:intergenic 40.0%
ACTCTTCTCGTGTGAAATGT+AGG - chr7_4:11595252-11595271 Msa1140220:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr7_4:11595610-11595629 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr7_4:11595610-11595629 Msa1140220:intron 40.0%
GAGAGGGAAGGAATTAAAAC+AGG + chr7_4:11595661-11595680 None:intergenic 40.0%
CTCTCTTACATTGGACGTTA+AGG - chr7_4:11595719-11595738 Msa1140220:intron 40.0%
TTACATTGGACGTTAAGGTG+TGG - chr7_4:11595724-11595743 Msa1140220:intron 40.0%
TACATTGGACGTTAAGGTGT+GGG - chr7_4:11595725-11595744 Msa1140220:intron 40.0%
ATACATTTGCCAACTCTGTC+TGG - chr7_4:11595784-11595803 Msa1140220:intron 40.0%
TACATTTGCCAACTCTGTCT+GGG - chr7_4:11595785-11595804 Msa1140220:intron 40.0%
TGGGGATTATTTACCCTGTA+GGG + chr7_4:11595854-11595873 None:intergenic 40.0%
! ACAGTTTTCATCACCAAACC+TGG - chr7_4:11595986-11596005 Msa1140220:intron 40.0%
GCTAGAGAATCATATTGACC+AGG + chr7_4:11596007-11596026 None:intergenic 40.0%
AGTGAAGGAAAAGTTCATCC+AGG - chr7_4:11596027-11596046 Msa1140220:intron 40.0%
! TGGAAAATGATGGAGAATGG+AGG - chr7_4:11596160-11596179 Msa1140220:intron 40.0%
! AAATGATGGAGAATGGAGGA+AGG - chr7_4:11596164-11596183 Msa1140220:intron 40.0%
GGATTCACACTAGAATTCCT+AGG - chr7_4:11596256-11596275 Msa1140220:intron 40.0%
!!! CACCCTTCTTGTTTTCAACT+TGG - chr7_4:11596324-11596343 Msa1140220:intron 40.0%
! TTGGTCTGGAATCGAAGTTA+TGG - chr7_4:11596343-11596362 Msa1140220:intron 40.0%
! GATTTTTGTTCGTAGACCGA+AGG - chr7_4:11596530-11596549 Msa1140220:intron 40.0%
! TCTGTTGTGCTACTAAGAGT+CGG + chr7_4:11596566-11596585 None:intergenic 40.0%
TCTTAGTAGCACAACAGATC+TGG - chr7_4:11596568-11596587 Msa1140220:intron 40.0%
CTTAGTAGCACAACAGATCT+GGG - chr7_4:11596569-11596588 Msa1140220:intron 40.0%
GAACAGGCAAACAATGATCA+CGG - chr7_4:11596720-11596739 Msa1140220:intron 40.0%
TGAAACTGCAGACATTGGAA+TGG - chr7_4:11596863-11596882 Msa1140220:intron 40.0%
! ACAAAGTGTCTTGGAAGATG+AGG - chr7_4:11597253-11597272 Msa1140220:intron 40.0%
ATTCTGCAGCAAGCTCAATA+GGG + chr7_4:11597540-11597559 None:intergenic 40.0%
! GAGTTAAAAAGGTGTGTGGT+AGG - chr7_4:11597749-11597768 Msa1140220:exon 40.0%
TTCTCCTATGTTCCGCAAAC+AGG - chr7_4:11587399-11587418 Msa1140220:three_prime_UTR 45.0%
CAAACCTGTTTGCGGAACAT+AGG + chr7_4:11587406-11587425 None:intergenic 45.0%
CTATGTTCCGCAAACAGGTT+TGG - chr7_4:11587404-11587423 Msa1140220:three_prime_UTR 45.0%
AGGGTGTGTGATTCATGTGT+TGG - chr7_4:11587556-11587575 Msa1140220:CDS 45.0%
AAGGGCTTAAACCCTGAACA+AGG - chr7_4:11588112-11588131 Msa1140220:intron 45.0%
CTGCAATTGATCCACAACAC+AGG - chr7_4:11588286-11588305 Msa1140220:CDS 45.0%
AGATAGGCACCAAGTCAGTT+CGG - chr7_4:11588571-11588590 Msa1140220:CDS 45.0%
CTAGCGTGTGATACGATTCA+CGG + chr7_4:11589479-11589498 None:intergenic 45.0%
ACTACGAAAAACACCCTCCA+TGG + chr7_4:11589692-11589711 None:intergenic 45.0%
TTACTTTCCAGGGAAGGACT+TGG - chr7_4:11589886-11589905 Msa1140220:intron 45.0%
! GCAAGTGCCCTAGAAACTTT+TGG - chr7_4:11589937-11589956 Msa1140220:intron 45.0%
! AGTGCCCTAGAAACTTTTGG+TGG - chr7_4:11589940-11589959 Msa1140220:intron 45.0%
! GTGCCCTAGAAACTTTTGGT+GGG - chr7_4:11589941-11589960 Msa1140220:intron 45.0%
! TGCCCTAGAAACTTTTGGTG+GGG - chr7_4:11589942-11589961 Msa1140220:intron 45.0%
CTACACTGATGGGGTCATTA+TGG + chr7_4:11589969-11589988 None:intergenic 45.0%
CTCCAAAAGCTACACTGATG+GGG + chr7_4:11589978-11589997 None:intergenic 45.0%
CCTCCAAAAGCTACACTGAT+GGG + chr7_4:11589979-11589998 None:intergenic 45.0%
ACCTCCAAAAGCTACACTGA+TGG + chr7_4:11589980-11589999 None:intergenic 45.0%
CACCGTTGGCAAGATTATAG+GGG + chr7_4:11590312-11590331 None:intergenic 45.0%
CCAAGCTCTCTAATTCTTGG+AGG + chr7_4:11590848-11590867 None:intergenic 45.0%
CCTCCAAGAATTAGAGAGCT+TGG - chr7_4:11590845-11590864 Msa1140220:intron 45.0%
!! AACGTCAGAGGCATTTCGTT+TGG + chr7_4:11590894-11590913 None:intergenic 45.0%
AATCTGAAGGACAACGTCAG+AGG + chr7_4:11590906-11590925 None:intergenic 45.0%
CTGAACTCCCAATAGCTGTT+GGG + chr7_4:11591545-11591564 None:intergenic 45.0%
ACTGAACTCCCAATAGCTGT+TGG + chr7_4:11591546-11591565 None:intergenic 45.0%
AACAGCTATTGGGAGTTCAG+TGG - chr7_4:11591545-11591564 Msa1140220:CDS 45.0%
ACAGCTATTGGGAGTTCAGT+GGG - chr7_4:11591546-11591565 Msa1140220:CDS 45.0%
CGACGCTTAATAAGAGACAG+AGG + chr7_4:11591803-11591822 None:intergenic 45.0%
TTTGGAGATAGGAATGCACC+TGG + chr7_4:11592436-11592455 None:intergenic 45.0%
AACTTGAAGAGTCTCTGTCC+AGG - chr7_4:11593050-11593069 Msa1140220:intron 45.0%
CATTTGAGAGAGCAGTAACC+TGG + chr7_4:11593071-11593090 None:intergenic 45.0%
!! GAGTTTTTGGAAGCAGTCAG+TGG - chr7_4:11593111-11593130 Msa1140220:intron 45.0%
GTAACGAAGATGTGCATCCA+TGG + chr7_4:11593139-11593158 None:intergenic 45.0%
AATGGAGCCGTACATTAACC+AGG - chr7_4:11593265-11593284 Msa1140220:intron 45.0%
GAGAGCTGCTTGCTCATAAT+TGG + chr7_4:11593456-11593475 None:intergenic 45.0%
! GAAAGTAGGTGGGCTTCTAA+TGG - chr7_4:11593515-11593534 Msa1140220:intron 45.0%
GGAGATGGTATACAAGCCAT+TGG - chr7_4:11593557-11593576 Msa1140220:intron 45.0%
AGTAATGCAGAATGCTGCCA+AGG - chr7_4:11593607-11593626 Msa1140220:intron 45.0%
GTAATGCAGAATGCTGCCAA+GGG - chr7_4:11593608-11593627 Msa1140220:intron 45.0%
GGAAAGGTTGAAAAGAGAGC+TGG - chr7_4:11593629-11593648 Msa1140220:intron 45.0%
CCTTAAGTTTGACGAACGCT+TGG + chr7_4:11593763-11593782 None:intergenic 45.0%
CCAAGCGTTCGTCAAACTTA+AGG - chr7_4:11593760-11593779 Msa1140220:intron 45.0%
AGCGTTCGTCAAACTTAAGG+GGG - chr7_4:11593763-11593782 Msa1140220:intron 45.0%
AATAGTTCGGAGCTTGGTTC+TGG - chr7_4:11594002-11594021 Msa1140220:intron 45.0%
! GTTCTGGACTTCTTAGTCGA+TGG - chr7_4:11594018-11594037 Msa1140220:intron 45.0%
GTTCACAGTGTGATGAGCAA+CGG + chr7_4:11594090-11594109 None:intergenic 45.0%
AATCTGAGAGCTCAGCAATG+AGG + chr7_4:11594356-11594375 None:intergenic 45.0%
TGAGCTCTCAGATTCCTGAA+AGG - chr7_4:11594362-11594381 Msa1140220:intron 45.0%
GAGCTCTCAGATTCCTGAAA+GGG - chr7_4:11594363-11594382 Msa1140220:intron 45.0%
CCGGCAACAACTGATAGAAA+TGG + chr7_4:11594450-11594469 None:intergenic 45.0%
!! TCGCTGCTGGTTCAAATTTC+TGG + chr7_4:11594608-11594627 None:intergenic 45.0%
ACCAAGGTTTCGATGAACAC+CGG + chr7_4:11594764-11594783 None:intergenic 45.0%
CCTTTGATATGTGCACACCA+AGG + chr7_4:11594780-11594799 None:intergenic 45.0%
! CCTTGGTGTGCACATATCAA+AGG - chr7_4:11594777-11594796 Msa1140220:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr7_4:11595609-11595628 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr7_4:11595609-11595628 Msa1140220:intron 45.0%
AGAGCGAACCTACAACAGAA+TGG + chr7_4:11595703-11595722 None:intergenic 45.0%
GTAGGTTCGCTCTCTTACAT+TGG - chr7_4:11595710-11595729 Msa1140220:intron 45.0%
!! GCAATCAAGAAGTGCCTTTC+AGG - chr7_4:11595818-11595837 Msa1140220:intron 45.0%
AGGGACAAGATCAACCTGAA+AGG + chr7_4:11595835-11595854 None:intergenic 45.0%
! AGGTTGATCTTGTCCCTACA+GGG - chr7_4:11595838-11595857 Msa1140220:intron 45.0%
GTGGGGATTATTTACCCTGT+AGG + chr7_4:11595855-11595874 None:intergenic 45.0%
GGAAAAGTTCATCCAGGCAA+AGG - chr7_4:11596033-11596052 Msa1140220:intron 45.0%
TCTTCTCTGCATACTGCCAA+GGG + chr7_4:11596512-11596531 None:intergenic 45.0%
ATCTTCTCTGCATACTGCCA+AGG + chr7_4:11596513-11596532 None:intergenic 45.0%
!! AGTCGGTACTGATTGTCCTT+CGG + chr7_4:11596549-11596568 None:intergenic 45.0%
CAATGATCACGGCCCTAATT+TGG - chr7_4:11596731-11596750 Msa1140220:intron 45.0%
ATGCGTTCCCTGCCAAATTA+GGG + chr7_4:11596746-11596765 None:intergenic 45.0%
AATGCGTTCCCTGCCAAATT+AGG + chr7_4:11596747-11596766 None:intergenic 45.0%
TAATTTGGCAGGGAACGCAT+TGG - chr7_4:11596746-11596765 Msa1140220:intron 45.0%
GCTTGTGAAACTGCAGACAT+TGG - chr7_4:11596858-11596877 Msa1140220:intron 45.0%
AACTGCAGACATTGGAATGG+TGG - chr7_4:11596866-11596885 Msa1140220:intron 45.0%
TATTTGCGCCATATTGCAGG+AGG + chr7_4:11596896-11596915 None:intergenic 45.0%
!! TGCTACTTTCAAGGTCAGTG+TGG - chr7_4:11596991-11597010 Msa1140220:intron 45.0%
CAGTCAAATGGCAATGTCAC+AGG + chr7_4:11597057-11597076 None:intergenic 45.0%
AATCTGTAACTATGCAGGGG+AGG - chr7_4:11597481-11597500 Msa1140220:intron 45.0%
TTCTGCAGCAAGCTCAATAG+GGG + chr7_4:11597539-11597558 None:intergenic 45.0%
GATTCTGCAGCAAGCTCAAT+AGG + chr7_4:11597541-11597560 None:intergenic 45.0%
AGGTTGTAATGTCTGCCCTT+TGG - chr7_4:11597769-11597788 Msa1140220:five_prime_UTR 45.0%
!! AAAAAAAAAAAAAATGTATT+AGG + chr7_4:11590983-11591002 None:intergenic 5.0%
!!! TAAATTCTTTTATAAAATAA+AGG - chr7_4:11595009-11595028 Msa1140220:intron 5.0%
!! TAAAGTTAATATTAAAAAAA+AGG + chr7_4:11595112-11595131 None:intergenic 5.0%
TCCCTGACACTTCTGATCGA+AGG - chr7_4:11587642-11587661 Msa1140220:intron 50.0%
!! GCCTTCGATCAGAAGTGTCA+GGG + chr7_4:11587646-11587665 None:intergenic 50.0%
! GATAGGTGTTGTCGACGTGT+CGG - chr7_4:11587742-11587761 Msa1140220:intron 50.0%
GGTGAAACAGATACAGGGCA+TGG - chr7_4:11588973-11588992 Msa1140220:intron 50.0%
GAAACAGATACAGGGCATGG+AGG - chr7_4:11588976-11588995 Msa1140220:intron 50.0%
! GGACTTGGAGAGGCATATGA+TGG - chr7_4:11589901-11589920 Msa1140220:intron 50.0%
! GCCCTAGAAACTTTTGGTGG+GGG - chr7_4:11589943-11589962 Msa1140220:intron 50.0%
GCCCCCACCAAAAGTTTCTA+GGG + chr7_4:11589947-11589966 None:intergenic 50.0%
! GACCCCATCAGTGTAGCTTT+TGG - chr7_4:11589973-11589992 Msa1140220:intron 50.0%
! CCCATCAGTGTAGCTTTTGG+AGG - chr7_4:11589976-11589995 Msa1140220:intron 50.0%
CAAGGAAGTCCTTCGATCAC+AGG - chr7_4:11590417-11590436 Msa1140220:CDS 50.0%
TCTTAACGTTGAGCTCGCAC+TGG + chr7_4:11590612-11590631 None:intergenic 50.0%
CCGAGACTCTCGAATTCCTT+GGG + chr7_4:11590818-11590837 None:intergenic 50.0%
CCCAAGGAATTCGAGAGTCT+CGG - chr7_4:11590815-11590834 Msa1140220:CDS 50.0%
CCAAGGAATTCGAGAGTCTC+GGG - chr7_4:11590816-11590835 Msa1140220:CDS 50.0%
CAGCTATTGGGAGTTCAGTG+GGG - chr7_4:11591547-11591566 Msa1140220:CDS 50.0%
TATTGGGAGTTCAGTGGGGA+GGG - chr7_4:11591551-11591570 Msa1140220:CDS 50.0%
CGTGCTTCCTGCACTAAGAA+AGG + chr7_4:11592380-11592399 None:intergenic 50.0%
! AGCCAGCCTTATCTATGACC+AGG - chr7_4:11592415-11592434 Msa1140220:intron 50.0%
CACCTGGTCATAGATAAGGC+TGG + chr7_4:11592420-11592439 None:intergenic 50.0%
TGTAGCTACTGCCCTAGAAG+AGG - chr7_4:11592832-11592851 Msa1140220:intron 50.0%
GCGTTCGTCAAACTTAAGGG+GGG - chr7_4:11593764-11593783 Msa1140220:intron 50.0%
ACTTAAGGGGGGACTGGAAA+AGG - chr7_4:11593775-11593794 Msa1140220:intron 50.0%
! GGCTCTAGCAGTCAACATTC+TGG - chr7_4:11593972-11593991 Msa1140220:CDS 50.0%
GCAGTCAACATTCTGGTCAG+AGG - chr7_4:11593979-11593998 Msa1140220:CDS 50.0%
CAGAGGAATAGTTCGGAGCT+TGG - chr7_4:11593996-11594015 Msa1140220:intron 50.0%
TTGTTGCCGGCAAGTCCAAT+GGG - chr7_4:11594460-11594479 Msa1140220:intron 50.0%
CTGAGATGACCACTTCCCAT+TGG + chr7_4:11594478-11594497 None:intergenic 50.0%
CAATGGGAAGTGGTCATCTC+AGG - chr7_4:11594476-11594495 Msa1140220:intron 50.0%
! AATTTCTGGACGTACGCTCC+AGG + chr7_4:11594594-11594613 None:intergenic 50.0%
! TGATGCCCAATCTGGTTCAG+GGG + chr7_4:11594707-11594726 None:intergenic 50.0%
! GTGATGCCCAATCTGGTTCA+GGG + chr7_4:11594708-11594727 None:intergenic 50.0%
! AGTGATGCCCAATCTGGTTC+AGG + chr7_4:11594709-11594728 None:intergenic 50.0%
TCCGGTGTTCATCGAAACCT+TGG - chr7_4:11594760-11594779 Msa1140220:intron 50.0%
ATTTGCCAACTCTGTCTGGG+AGG - chr7_4:11595788-11595807 Msa1140220:intron 50.0%
AAGTTCCTCCCAGACAGAGT+TGG + chr7_4:11595796-11595815 None:intergenic 50.0%
!! CAGGTTGATCTTGTCCCTAC+AGG - chr7_4:11595837-11595856 Msa1140220:intron 50.0%
AGTAGCACAACAGATCTGGG+AGG - chr7_4:11596572-11596591 Msa1140220:intron 50.0%
ATCACGGCCCTAATTTGGCA+GGG - chr7_4:11596736-11596755 Msa1140220:intron 50.0%
TACTAAAGAAGGCCAGCCGA+TGG - chr7_4:11596803-11596822 Msa1140220:intron 50.0%
AGCCGATGGTCAATCTCGAA+GGG - chr7_4:11596817-11596836 Msa1140220:intron 50.0%
CACCCTTCGAGATTGACCAT+CGG + chr7_4:11596822-11596841 None:intergenic 50.0%
! TTGGTCTGAGTCAAGAGCAC+TGG - chr7_4:11597840-11597859 Msa1140220:five_prime_UTR 50.0%
!! CGCCTTCGATCAGAAGTGTC+AGG + chr7_4:11587647-11587666 None:intergenic 55.0%
TTCCAGGGAAGGACTTGGAG+AGG - chr7_4:11589891-11589910 Msa1140220:intron 55.0%
GGCCCCCACCAAAAGTTTCT+AGG + chr7_4:11589948-11589967 None:intergenic 55.0%
CCCGAGACTCTCGAATTCCT+TGG + chr7_4:11590819-11590838 None:intergenic 55.0%
CTATTGGGAGTTCAGTGGGG+AGG - chr7_4:11591550-11591569 Msa1140220:CDS 55.0%
!! AGGGAAGTGCTTTGGCAAGG+AGG - chr7_4:11591570-11591589 Msa1140220:CDS 55.0%
!! GGGAAGTGCTTTGGCAAGGA+GGG - chr7_4:11591571-11591590 Msa1140220:CDS 55.0%
GCTACTGCCCTAGAAGAGGT+AGG - chr7_4:11592836-11592855 Msa1140220:intron 55.0%
GCAGAATGCTGCCAAGGGAA+AGG - chr7_4:11593613-11593632 Msa1140220:intron 55.0%
CGTCAAACTTAAGGGGGGAC+TGG - chr7_4:11593769-11593788 Msa1140220:intron 55.0%
! AGAGAGTGCGCTGGACCAAA+TGG - chr7_4:11594300-11594319 Msa1140220:intron 55.0%
GTGCGCTGGACCAAATGGAT+TGG - chr7_4:11594305-11594324 Msa1140220:intron 55.0%
GTTGTTGCCGGCAAGTCCAA+TGG - chr7_4:11594459-11594478 Msa1140220:intron 55.0%
CCACTTCCCATTGGACTTGC+CGG + chr7_4:11594469-11594488 None:intergenic 55.0%
GATCACGGCCCTAATTTGGC+AGG - chr7_4:11596735-11596754 Msa1140220:intron 55.0%
CTTCGAGATTGACCATCGGC+TGG + chr7_4:11596818-11596837 None:intergenic 55.0%
CAGCCGATGGTCAATCTCGA+AGG - chr7_4:11596816-11596835 Msa1140220:intron 55.0%
GTGGAGCTCCTCCTGCAATA+TGG - chr7_4:11596885-11596904 Msa1140220:intron 55.0%
TGCCTCTCCAAGTCCTTCCC+TGG + chr7_4:11589896-11589915 None:intergenic 60.0%
!! CAGTGGGGAGGGAAGTGCTT+TGG - chr7_4:11591562-11591581 Msa1140220:CDS 60.0%
!! GGGAGGGAAGTGCTTTGGCA+AGG - chr7_4:11591567-11591586 Msa1140220:CDS 60.0%
CAGAGGGAGTGAGACAGTCG+AGG - chr7_4:11592036-11592055 Msa1140220:CDS 60.0%
GGAAGCAGTCAGTGGGACCA+TGG - chr7_4:11593119-11593138 Msa1140220:intron 60.0%
CCGGCAAGTCCAATGGGAAG+TGG - chr7_4:11594466-11594485 Msa1140220:intron 60.0%
TGGGGCCCCTGAACCAGATT+GGG - chr7_4:11594699-11594718 Msa1140220:CDS 60.0%
TGGCAGGGAACGCATTGGAC+TGG - chr7_4:11596751-11596770 Msa1140220:intron 60.0%
CGATCCTCGAGCTGTGGATG+AGG - chr7_4:11597504-11597523 Msa1140220:intron 60.0%
CCATCCTCATCCACAGCTCG+AGG + chr7_4:11597511-11597530 None:intergenic 60.0%
CCTCGAGCTGTGGATGAGGA+TGG - chr7_4:11597508-11597527 Msa1140220:intron 60.0%
! AGTGCAGGCAGAGAGTGCGC+TGG - chr7_4:11594291-11594310 Msa1140220:intron 65.0%
GTGGGGCCCCTGAACCAGAT+TGG - chr7_4:11594698-11594717 Msa1140220:CDS 65.0%
GGGAGGCGATCCTCGAGCTG+TGG - chr7_4:11597498-11597517 Msa1140220:intron 70.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 11587086 11598050 11587086 ID=Msa1140220;Name=Msa1140220
chr7_4 mRNA 11587086 11598050 11587086 ID=Msa1140220-mRNA-1;Parent=Msa1140220;Name=Msa1140220-mRNA-1;_AED=0.12;_eAED=0.12;_QI=290|1|1|1|1|1|19|438|832
chr7_4 exon 11587086 11587638 11587086 ID=Msa1140220-mRNA-1:exon:2797;Parent=Msa1140220-mRNA-1
chr7_4 exon 11588133 11588617 11588133 ID=Msa1140220-mRNA-1:exon:2796;Parent=Msa1140220-mRNA-1
chr7_4 exon 11589082 11589175 11589082 ID=Msa1140220-mRNA-1:exon:2795;Parent=Msa1140220-mRNA-1
chr7_4 exon 11589277 11589422 11589277 ID=Msa1140220-mRNA-1:exon:2794;Parent=Msa1140220-mRNA-1
chr7_4 exon 11590338 11590676 11590338 ID=Msa1140220-mRNA-1:exon:2793;Parent=Msa1140220-mRNA-1
chr7_4 exon 11590752 11590838 11590752 ID=Msa1140220-mRNA-1:exon:2792;Parent=Msa1140220-mRNA-1
chr7_4 exon 11590934 11591164 11590934 ID=Msa1140220-mRNA-1:exon:2791;Parent=Msa1140220-mRNA-1
chr7_4 exon 11591273 11591404 11591273 ID=Msa1140220-mRNA-1:exon:2790;Parent=Msa1140220-mRNA-1
chr7_4 exon 11591502 11591717 11591502 ID=Msa1140220-mRNA-1:exon:2789;Parent=Msa1140220-mRNA-1
chr7_4 exon 11591850 11591891 11591850 ID=Msa1140220-mRNA-1:exon:2788;Parent=Msa1140220-mRNA-1
chr7_4 exon 11591969 11592064 11591969 ID=Msa1140220-mRNA-1:exon:2787;Parent=Msa1140220-mRNA-1
chr7_4 exon 11592150 11592197 11592150 ID=Msa1140220-mRNA-1:exon:2786;Parent=Msa1140220-mRNA-1
chr7_4 exon 11592283 11592348 11592283 ID=Msa1140220-mRNA-1:exon:2785;Parent=Msa1140220-mRNA-1
chr7_4 exon 11592700 11592744 11592700 ID=Msa1140220-mRNA-1:exon:2784;Parent=Msa1140220-mRNA-1
chr7_4 exon 11593941 11594003 11593941 ID=Msa1140220-mRNA-1:exon:2783;Parent=Msa1140220-mRNA-1
chr7_4 exon 11594698 11594768 11594698 ID=Msa1140220-mRNA-1:exon:2782;Parent=Msa1140220-mRNA-1
chr7_4 exon 11595139 11595239 11595139 ID=Msa1140220-mRNA-1:exon:2781;Parent=Msa1140220-mRNA-1
chr7_4 exon 11596077 11596153 11596077 ID=Msa1140220-mRNA-1:exon:2780;Parent=Msa1140220-mRNA-1
chr7_4 exon 11597716 11598050 11597716 ID=Msa1140220-mRNA-1:exon:2779;Parent=Msa1140220-mRNA-1
chr7_4 five_prime_UTR 11597761 11598050 11597761 ID=Msa1140220-mRNA-1:five_prime_utr;Parent=Msa1140220-mRNA-1
chr7_4 CDS 11597716 11597760 11597716 ID=Msa1140220-mRNA-1:cds;Parent=Msa1140220-mRNA-1
chr7_4 CDS 11596077 11596153 11596077 ID=Msa1140220-mRNA-1:cds;Parent=Msa1140220-mRNA-1
chr7_4 CDS 11595139 11595239 11595139 ID=Msa1140220-mRNA-1:cds;Parent=Msa1140220-mRNA-1
chr7_4 CDS 11594698 11594768 11594698 ID=Msa1140220-mRNA-1:cds;Parent=Msa1140220-mRNA-1
chr7_4 CDS 11593941 11594003 11593941 ID=Msa1140220-mRNA-1:cds;Parent=Msa1140220-mRNA-1
chr7_4 CDS 11592700 11592744 11592700 ID=Msa1140220-mRNA-1:cds;Parent=Msa1140220-mRNA-1
chr7_4 CDS 11592283 11592348 11592283 ID=Msa1140220-mRNA-1:cds;Parent=Msa1140220-mRNA-1
chr7_4 CDS 11592150 11592197 11592150 ID=Msa1140220-mRNA-1:cds;Parent=Msa1140220-mRNA-1
chr7_4 CDS 11591969 11592064 11591969 ID=Msa1140220-mRNA-1:cds;Parent=Msa1140220-mRNA-1
chr7_4 CDS 11591850 11591891 11591850 ID=Msa1140220-mRNA-1:cds;Parent=Msa1140220-mRNA-1
chr7_4 CDS 11591502 11591717 11591502 ID=Msa1140220-mRNA-1:cds;Parent=Msa1140220-mRNA-1
chr7_4 CDS 11591273 11591404 11591273 ID=Msa1140220-mRNA-1:cds;Parent=Msa1140220-mRNA-1
chr7_4 CDS 11590934 11591164 11590934 ID=Msa1140220-mRNA-1:cds;Parent=Msa1140220-mRNA-1
chr7_4 CDS 11590752 11590838 11590752 ID=Msa1140220-mRNA-1:cds;Parent=Msa1140220-mRNA-1
chr7_4 CDS 11590338 11590676 11590338 ID=Msa1140220-mRNA-1:cds;Parent=Msa1140220-mRNA-1
chr7_4 CDS 11589277 11589422 11589277 ID=Msa1140220-mRNA-1:cds;Parent=Msa1140220-mRNA-1
chr7_4 CDS 11589082 11589175 11589082 ID=Msa1140220-mRNA-1:cds;Parent=Msa1140220-mRNA-1
chr7_4 CDS 11588133 11588617 11588133 ID=Msa1140220-mRNA-1:cds;Parent=Msa1140220-mRNA-1
chr7_4 CDS 11587524 11587638 11587524 ID=Msa1140220-mRNA-1:cds;Parent=Msa1140220-mRNA-1
chr7_4 three_prime_UTR 11587086 11587523 11587086 ID=Msa1140220-mRNA-1:three_prime_utr;Parent=Msa1140220-mRNA-1
Gene Sequence

>Msa1140220

ATGCAATTCGCTAAGCTTGATGATTCTCCTATGTTCCGCAAACAGATACAGGGCATGGAGGAAAGTGCCGAATCTTTGAGAGAGAGAAGTTTGAAATTTTACAAGGGATGCAGAAAATACACGGAAGGACTTGGAGAGGCATATGATGGAGACATTGCATTTGCAAGTGCCCTAGAAACTTTTGGTGGGGGCCATAATGACCCCATCAGTGTAGCTTTTGGAGGCCCTGTTATGACCAAATTCACTATAGCATTAAGAGAAATCGGGACATACAAGGAAGTCCTTCGATCACAGGTTGAGCACATGTTAAATGACAGATTGCTCCAGTTTGTCAATATTGATTTGCAAGAAGTCAAGGAAGCACGAAAACGCTTTGACAAAGCCAGCCTTATCTATGACCAGACTCGTGAAAAGTTTCTTTCACTGAGAAAAGGTACAAAAAGTGATGTAGCTACTGCCCTAGAAGAGGAGCTTCATAGTGCAAGAACTACATTTGAGCAAACTCGATTTAATCTGGTTACTGCTCTCTCAAATGTTGAAGCAAAGAAGAGATTTGAGTTTTTGGAAGCAGTCAGTGGGACCATGGATGCACATCTTCGTTACTTCAAACAGGGGTATGAACTATTACATCAAATGGAGCCGTACATTAACCAGGTCTTGACTTATGCTCAGCAATCAAGAGAAAGGTCCAATTATGAGCAAGCAGCTCTCAATGAAAGAATGCAAGATTACAAACGACAGATTGATCGAGAAAGTAGGTGGGCTTCTAATGGTTCTAATGGATCTCCTAATGGAGATGGTATACAAGCCATTGGTAGAAGTTCACATAAGATGATAGAAGCAGTAATGCAGAATGCTGCCAAGGGAAAGGTTCAGACTATTCGACAAGGTTATCTCTCCAAGCGTTCGTCAAACTTAAGGGGGGACTGGAAAAGGAGATTTTTCGTTCTTGATAGTCGGGGAATGCTGTATTACTACCGTAAACAATGCAGCAAACCATCTGGCTCTAGCAGTCAACATTCTGGTCAGAGGAATAGTTCGGAGCTTGGTTCTGGACTTCTTAGTCGATGGCTGTCTTCTCATCATCATCATCATGGTGGAGTACATGATGAGAAATCCGTTGCTCATCACACTGTGAACCTGCTTACATCAACAATCAAAGTTGATGCTGACCAATCAGATTTGAGGTTTTGCTTCCGCATCATTTCACCAACAAAGAACTACACTTTGCAGGCAGAGAGTGCGCTGGACCAAATGGATTGGATTGAAAAAATCACAGGTGTTATTGCCTCATTGCTGAGCTCTCAGATTCCTGAAAGGTTGTTGCCGGCAAGTCCAATGGGAAGTGGTCATCTCAGGTCTACCAGTGAGAGTAGTTCTTTTGAAAGTTCAGATTTTGACCACTGTGCTGTTGAAGAAAGTACAGCTGATAGATGTTTTGTGTCTTCACACCTGGAGCGTACGTCCAGAAATTTGAACCAGCAGCGATCCTGTAATAAAAGTGAAAAACCAATTGATGTGTTGCGAAGAGTTATTGGGAATGATAAATGTGCTGATTGTGGGGCCCCTGAACCAGATTGGGCATCACTAAATCTTGGCGTTCTTGTTTGCATTGAATGTTCCGGTGTTCATCGAAACCTTGGTGTGCACATATCAAAGGTTCGCTCTCTTACATTGGACGTTAAGGTGTGGGAACCTTCTGTGATAACTTTATTTCAGTCTCTTGGGAATACATTTGCCAACTCTGTCTGGGAGGAACTTTTGCAATCAAGAAGTGCCTTTCAGGTTGATCTTGTCCCTACAGGCTCGAGCAAGTCCGATAAGCCACAAACAGTTTTCATCACCAAACCTGGTCAATATGATTCTCTAGCAGTGAAGGAAAAGTTCATCCAGGCAAAGTATGCAGAGAAGATTTTTGTTCGTAGACCGAAGGACAATCAGTACCGACTCTTAGTAGCACAACAGATCTGGGAGGCTGTTCGTGCTAATGACAAGAAAGCCGTATACCGCTACATTGTTAATTCGGATGTTGATGTCAACGTTGTTTATGAGCAAGCATGCAACAACTCTTTAACCCTTGCCAAAGTAATGCTATTACAAGAACAGGCAAACAATGATCACGGCCCTAATTTGGCAGGGAACGCATTGGACTGGTCTTCTAATTGCTCTATGAATTTGGTGGGTACTAAAGAAGGCCAGCCGATGGTCAATCTCGAAGGGTGCACACTACTTCACATTGCTTGTGAAACTGCAGACATTGGAATGGTGGAGCTCCTCCTGCAATATGGCGCAAATATTAATGCAACTGATTTGAGAGGTCGAACTCCTTTACATCGTTGTATTCTCAAAGGAAGATCTATAATTGCAAGATTGCTACTTTCAAGGGGAGGCGATCCTCGAGCTGTGGATGAGGATGGAAGAACCCCTATTGAGCTTGCTGCAGAATCAAATGCTGATGACAGAGTAGTCCATGCTCCATCAAATGATTCTAATGGATGA
Protein sequence

>Msa1140220

MQFAKLDDSPMFRKQIQGMEESAESLRERSLKFYKGCRKYTEGLGEAYDGDIAFASALETFGGGHNDPISVAFGGPVMTKFTIALREIGTYKEVLRSQVEHMLNDRLLQFVNIDLQEVKEARKRFDKASLIYDQTREKFLSLRKGTKSDVATALEEELHSARTTFEQTRFNLVTALSNVEAKKRFEFLEAVSGTMDAHLRYFKQGYELLHQMEPYINQVLTYAQQSRERSNYEQAALNERMQDYKRQIDRESRWASNGSNGSPNGDGIQAIGRSSHKMIEAVMQNAAKGKVQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKPSGSSSQHSGQRNSSELGSGLLSRWLSSHHHHHGGVHDEKSVAHHTVNLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIASLLSSQIPERLLPASPMGSGHLRSTSESSSFESSDFDHCAVEESTADRCFVSSHLERTSRNLNQQRSCNKSEKPIDVLRRVIGNDKCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNTFANSVWEELLQSRSAFQVDLVPTGSSKSDKPQTVFITKPGQYDSLAVKEKFIQAKYAEKIFVRRPKDNQYRLLVAQQIWEAVRANDKKAVYRYIVNSDVDVNVVYEQACNNSLTLAKVMLLQEQANNDHGPNLAGNALDWSSNCSMNLVGTKEGQPMVNLEGCTLLHIACETADIGMVELLLQYGANINATDLRGRTPLHRCILKGRSIIARLLLSRGGDPRAVDEDGRTPIELAAESNADDRVVHAPSNDSNG*