AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1051840

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1051840 MtrunA17_Chr7g0221441 98.679 833 10 1 1 833 1 832 0.0 1719
Msa1051840 MtrunA17_Chr8g0385781 58.415 820 302 6 1 819 1 782 0.0 975
Msa1051840 MtrunA17_Chr3g0131671 58.153 834 302 9 1 826 1 795 0.0 936
Msa1051840 MtrunA17_Chr4g0037651 47.561 820 363 11 3 819 5 760 0.0 738
Msa1051840 MtrunA17_Chr2g0318391 41.259 143 53 3 501 643 14 125 1.84e-25 110
Msa1051840 MtrunA17_Chr8g0360731 41.259 143 53 3 501 643 14 125 1.24e-24 108
Msa1051840 MtrunA17_Chr8g0352731 34.857 175 84 4 514 687 5 150 2.61e-23 98.6
Msa1051840 MtrunA17_Chr6g0481511 37.908 153 59 4 492 638 17 139 9.39e-23 99.0
Msa1051840 MtrunA17_Chr2g0292461 39.535 129 53 4 515 642 30 134 3.92e-19 89.7
Msa1051840 MtrunA17_Chr3g0083541 38.686 137 59 3 506 641 54 166 1.66e-18 89.0
Msa1051840 MtrunA17_Chr8g0380371 68.293 41 13 0 515 555 21 61 5.91e-15 70.5
Msa1051840 MtrunA17_Chr8g0366731 49.254 67 32 1 515 581 22 86 3.69e-14 75.5
Msa1051840 MtrunA17_Chr8g0366741 43.836 73 39 1 515 587 22 92 1.57e-13 73.6
Msa1051840 MtrunA17_Chr1g0182571 45.333 75 39 1 509 583 10 82 1.72e-13 73.9
Msa1051840 MtrunA17_Chr7g0262921 47.826 69 34 1 515 583 16 82 1.70e-12 70.5
Msa1051840 MtrunA17_Chr5g0405451 38.554 83 51 0 740 822 334 416 9.95e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1051840 AT5G13300.1 76.951 833 180 4 1 833 1 821 0.0 1276
Msa1051840 AT5G61980.1 66.110 838 265 9 1 831 1 826 0.0 1086
Msa1051840 AT1G10870.2 44.621 818 397 15 3 819 4 766 0.0 672
Msa1051840 AT1G10870.1 44.743 818 391 16 3 819 4 761 0.0 669
Msa1051840 AT1G60860.1 44.053 824 389 14 3 819 4 762 0.0 663
Msa1051840 AT1G60860.2 42.598 716 339 14 111 819 1 651 0.0 538
Msa1051840 AT1G60860.3 41.231 650 318 13 173 819 3 591 2.14e-153 462
Msa1051840 AT5G54310.1 43.411 129 42 3 515 643 28 125 9.00e-25 109
Msa1051840 AT3G17660.4 35.294 153 63 3 489 641 7 123 3.24e-22 95.5
Msa1051840 AT3G17660.1 35.526 152 62 3 490 641 8 123 7.55e-22 95.9
Msa1051840 AT3G17660.2 35.294 153 63 3 489 641 7 123 1.88e-21 95.1
Msa1051840 AT4G21160.2 42.636 129 49 5 515 642 27 131 1.03e-20 94.7
Msa1051840 AT4G21160.3 42.636 129 49 5 515 642 27 131 1.03e-20 94.7
Msa1051840 AT4G21160.1 42.636 129 49 5 515 642 27 131 1.03e-20 94.7
Msa1051840 AT4G21160.4 42.636 129 49 5 515 642 27 131 1.03e-20 94.7
Msa1051840 AT3G07940.2 40.940 149 59 7 502 646 43 166 5.38e-19 88.6
Msa1051840 AT4G05330.3 39.535 129 53 4 515 642 27 131 2.74e-18 87.8
Msa1051840 AT4G05330.1 39.535 129 53 4 515 642 27 131 2.74e-18 87.8
Msa1051840 AT3G07940.1 40.940 149 59 7 502 646 43 166 3.51e-18 88.2
Msa1051840 AT3G17660.3 30.719 153 60 3 489 641 7 113 1.81e-14 73.9
Msa1051840 AT4G17890.2 45.205 73 38 1 515 587 25 95 2.73e-13 73.2
Msa1051840 AT4G17890.1 45.205 73 38 1 515 587 25 95 2.80e-13 73.2
Msa1051840 AT5G46750.1 45.205 73 38 1 515 587 22 92 5.66e-13 72.0
Msa1051840 AT3G53710.1 48.438 64 31 1 515 578 16 77 9.60e-13 72.0
Msa1051840 AT3G53710.3 48.438 64 31 1 515 578 16 77 9.60e-13 72.0
Msa1051840 AT3G53710.2 48.438 64 31 1 515 578 16 77 9.60e-13 72.0
Msa1051840 AT2G35210.2 39.796 98 51 2 490 587 3 92 1.22e-12 70.9
Msa1051840 AT2G35210.1 48.611 72 31 1 490 561 3 68 1.64e-12 70.9
Msa1051840 AT2G37550.2 48.438 64 31 1 515 578 16 77 2.77e-12 70.5
Msa1051840 AT2G37550.1 48.438 64 31 1 515 578 16 77 2.77e-12 70.5
Msa1051840 AT5G66055.1 47.297 74 39 0 740 813 325 398 9.07e-12 68.6

Find 205 sgRNAs with CRISPR-Local

Find 654 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCGCTGCTGGTTCAAATTTC+TGG 0.132441 7_2:+19491042 None:intergenic
TTCTAATTGCTCTATGAATT+TGG 0.168012 7_2:-19489174 Msa1051840:CDS
GCAATCAAGAAGTGCCTTTC+AGG 0.187884 7_2:-19490121 Msa1051840:CDS
TATACGAAAGTTACCCTTTC+AGG 0.190867 7_2:+19491271 None:intergenic
AATGCGTTCCCTGCCAAATT+AGG 0.193423 7_2:+19489206 None:intergenic
TCTTAATGCTATAGTGAATT+TGG 0.197605 7_2:+19495229 None:intergenic
AAGAGCTGCTTGCTCATAAT+TGG 0.207006 7_2:+19492197 None:intergenic
CAATGATCACGGCCCTAATT+TGG 0.249954 7_2:-19489219 Msa1051840:CDS
AATAGTTCGGAGCTTGGTTC+TGG 0.296829 7_2:-19491648 Msa1051840:CDS
ATTAACAATGTAGCGGTATA+CGG 0.302643 7_2:+19489331 None:intergenic
TACAAAAGCCTACCTCTTCT+AGG 0.303309 7_2:+19492806 None:intergenic
GATTCTGCAGCAAGCTCAAT+AGG 0.316009 7_2:+19488410 None:intergenic
CAGGTTGATCTTGTCCCTAC+AGG 0.324179 7_2:-19490102 Msa1051840:CDS
CTACACTGATGGGGTCATTA+TGG 0.324472 7_2:+19495645 None:intergenic
GACCCCATCAGTGTAGCTTT+TGG 0.325584 7_2:-19495638 Msa1051840:CDS
ATAGTGAATTTGGTCATAAC+AGG 0.328216 7_2:+19495239 None:intergenic
AGTGATGCCCAATCTGGTTC+AGG 0.336427 7_2:+19490941 None:intergenic
ATAACTTTATTTCAGTCTCT+TGG 0.340949 7_2:-19490180 Msa1051840:CDS
GCTAGTATGAAGAGTTAAAA+AGG 0.341811 7_2:-19488209 Msa1051840:three_prime_UTR
AACAAAGAACTACACTTTGC+AGG 0.344247 7_2:-19491466 Msa1051840:intron
TAATATTTGCGCCATATTGC+AGG 0.345337 7_2:+19489054 None:intergenic
ACTATAGCATTAAGAGAAAT+CGG 0.349793 7_2:-19495221 Msa1051840:CDS
CTCTCTTACATTGGACGTTA+AGG 0.354608 7_2:-19490220 Msa1051840:CDS
CCAAGCGTTCGTCAAACTTA+AGG 0.354634 7_2:-19491890 Msa1051840:CDS
GCAAGTGCCCTAGAAACTTT+TGG 0.355212 7_2:-19495674 Msa1051840:CDS
CCACTTCCCATTGGACTTGC+CGG 0.360900 7_2:+19491181 None:intergenic
TGAGCAAACTCGATTTAATC+TGG 0.361409 7_2:-19492685 Msa1051840:intron
ATACGTTTGCCAACTCTGTC+TGG 0.361533 7_2:-19490155 Msa1051840:CDS
TCTTAGTAGCACAACAGATC+TGG 0.365114 7_2:-19489382 Msa1051840:CDS
TGGGCTTCTAATGGTTCTAA+TGG 0.365499 7_2:-19492126 Msa1051840:CDS
GCTCCATCAAATGATTCTAA+TGG 0.369320 7_2:-19488362 Msa1051840:CDS
GCAAATCAATATTGACAAAC+TGG 0.370026 7_2:+19494487 None:intergenic
CATCCATTAGAATCATTTGA+TGG 0.371256 7_2:+19488359 None:intergenic
ATGCGTTCCCTGCCAAATTA+GGG 0.379799 7_2:+19489207 None:intergenic
TTGCAAGATTGCTACTTTCA+AGG 0.380878 7_2:-19488968 Msa1051840:intron
GAAAACTGTTTGTGGCTTAT+CGG 0.383032 7_2:+19489967 None:intergenic
ACTCTTCGCAACACATCAAT+TGG 0.383417 7_2:+19490998 None:intergenic
GGCTCTAGCAGTCAACATTC+TGG 0.387411 7_2:-19491678 Msa1051840:CDS
AACATTACTAAATTGTTGCT+TGG 0.390803 7_2:+19488071 None:intergenic
TTCTCCCATGTTCCGCAAAC+AGG 0.394746 7_2:-19498281 Msa1051840:intron
GATGTGTTGCGAAGAGTTAT+TGG 0.395797 7_2:-19490992 Msa1051840:CDS
GTGGAGCTCCTCCTGCAATA+TGG 0.396075 7_2:-19489065 Msa1051840:CDS
CTTGTTTGCATTGAATGTTC+CGG 0.396172 7_2:-19490905 Msa1051840:CDS
GGTTCTAATGGATCTCCTAA+TGG 0.402471 7_2:-19492114 Msa1051840:CDS
AGATTTAGTGATGCCCAATC+TGG 0.407169 7_2:+19490935 None:intergenic
TAACTTTATTTCAGTCTCTT+GGG 0.409140 7_2:-19490179 Msa1051840:CDS
CAAGCGTTCGTCAAACTTAA+GGG 0.412490 7_2:-19491889 Msa1051840:CDS
AGTAATGCTATTACAAGAAC+AGG 0.412893 7_2:-19489246 Msa1051840:CDS
AGAATCATATTGACCAGGTT+TGG 0.417148 7_2:+19489940 None:intergenic
ATTCTGCAGCAAGCTCAATA+GGG 0.419208 7_2:+19488411 None:intergenic
ATGGTTTGCTGCATTGTTTA+CGG 0.421371 7_2:+19491811 None:intergenic
ATACCGCTACATTGTTAATT+CGG 0.421557 7_2:-19489327 Msa1051840:CDS
TTCTTGTAATAGCATTACTT+TGG 0.424670 7_2:+19489250 None:intergenic
TATCTTATATATAATATACT+TGG 0.435588 7_2:+19488308 None:intergenic
ATGCTGACCAATCAGATTTG+AGG 0.438644 7_2:-19491512 Msa1051840:CDS
TTACTGGATTATTACTTGGC+AGG 0.444030 7_2:-19487921 Msa1051840:three_prime_UTR
CCAAACCTGTTTGCGGAACA+TGG 0.444352 7_2:+19498276 None:intergenic
ATGTGTTGCGAAGAGTTATT+GGG 0.448370 7_2:-19490991 Msa1051840:CDS
CTTTGATTGTTGATGTAAGC+AGG 0.452904 7_2:+19491538 None:intergenic
CCATTTCTATCAGTTGTTGC+CGG 0.453353 7_2:-19491200 Msa1051840:intron
GTATGAACTATTACATCAAA+TGG 0.454227 7_2:-19492403 Msa1051840:CDS
GTGGGGCCCCTGAACCAGAT+TGG 0.454280 7_2:-19490949 Msa1051840:CDS
TGCAAAGTGTAGTTCTTTGT+TGG 0.456177 7_2:+19491468 None:intergenic
GTAGGTTCGCTCTCTTACAT+TGG 0.459438 7_2:-19490229 Msa1051840:intron
TGGGGCCCCTGAACCAGATT+GGG 0.460177 7_2:-19490948 Msa1051840:CDS
GTGATGCCCAATCTGGTTCA+GGG 0.462999 7_2:+19490942 None:intergenic
TGTATTACTGGATTATTACT+TGG 0.464472 7_2:-19487925 Msa1051840:three_prime_UTR
ACATCTTCGTTACTTCAAAC+AGG 0.464760 7_2:-19492504 Msa1051840:intron
TGTAAAAGAATACCTTTGCC+TGG 0.465933 7_2:+19489894 None:intergenic
TGATGAAGATGTGATACATT+AGG 0.468537 7_2:-19488018 Msa1051840:three_prime_UTR
TTACTTTCCAGGGAAGGACT+TGG 0.469478 7_2:-19495725 Msa1051840:intron
GCTTGTATACCATCTCCATT+AGG 0.473433 7_2:+19492099 None:intergenic
CAATGGGAAGTGGTCATCTC+AGG 0.473521 7_2:-19491171 Msa1051840:CDS
GAAAGTAGGTGGGCTTCTAA+TGG 0.481638 7_2:-19492135 Msa1051840:CDS
GATCACGGCCCTAATTTGGC+AGG 0.483100 7_2:-19489215 Msa1051840:CDS
CCTTAAGTTTGACGAACGCT+TGG 0.488106 7_2:+19491890 None:intergenic
CAGAGGAATAGTTCGGAGCT+TGG 0.490071 7_2:-19491654 Msa1051840:CDS
GATTGGGCATCACTAAATCT+TGG 0.493255 7_2:-19490932 Msa1051840:CDS
TGGCAGGGAACGCATTGGAC+TGG 0.495152 7_2:-19489199 Msa1051840:CDS
GTTCTGGACTTCTTAGTCGA+TGG 0.495196 7_2:-19491632 Msa1051840:CDS
ACTTCTCTCTCTCAAAGATT+CGG 0.496519 7_2:+19496606 None:intergenic
AAGTTTCTTTCACTGAGAAA+AGG 0.500366 7_2:-19492853 Msa1051840:CDS
AGCAAAACCTCAAATCTGAT+TGG 0.500595 7_2:+19491505 None:intergenic
CCTCCAAAAGCTACACTGAT+GGG 0.501052 7_2:+19495635 None:intergenic
ACACTAATAAGAAAACTCTC+TGG 0.507040 7_2:-19488336 Msa1051840:three_prime_UTR
GTAATAGCATTACTTTGGCA+AGG 0.507209 7_2:+19489255 None:intergenic
GTTGTTGCCGGCAAGTCCAA+TGG 0.509510 7_2:-19491188 Msa1051840:CDS
AATTTCTGGACGTACGCTCC+AGG 0.514396 7_2:+19491056 None:intergenic
ATGATAAATGTGCTGATTGT+GGG 0.515223 7_2:-19490967 Msa1051840:CDS
CTTAGTAGCACAACAGATCT+GGG 0.517392 7_2:-19489381 Msa1051840:CDS
TTTGTGCATCCTATGTACAT+TGG 0.519372 7_2:-19487988 Msa1051840:three_prime_UTR
GGACTTGGAGAGGCATATGA+TGG 0.521668 7_2:-19495710 Msa1051840:CDS
GAGCTCTCAGATTCCTGAAA+GGG 0.521977 7_2:-19491284 Msa1051840:intron
CAAGGAAGTCCTTCGATCAC+AGG 0.522285 7_2:-19495192 Msa1051840:intron
AGGTTGTAATGTCTGCCCTT+TGG 0.522542 7_2:-19488178 Msa1051840:three_prime_UTR
TAGAATCATTTGATGGAGCA+TGG 0.523841 7_2:+19488366 None:intergenic
GTGCGCTGGACCAAATGGAT+TGG 0.524874 7_2:-19491342 Msa1051840:CDS
AGAGAGTGCGCTGGACCAAA+TGG 0.525588 7_2:-19491347 Msa1051840:CDS
TACTGGATTATTACTTGGCA+GGG 0.526366 7_2:-19487920 Msa1051840:three_prime_UTR
TTCTGGTCAGAGGAATAGTT+CGG 0.526551 7_2:-19491661 Msa1051840:CDS
CCTCGAGCTGTGGATGAGGA+TGG 0.527146 7_2:-19488440 Msa1051840:CDS
TTCAAAAGAACTACTCTCAC+TGG 0.527595 7_2:+19491144 None:intergenic
AGTCGGTACTGATTGTCCTT+CGG 0.529976 7_2:+19489404 None:intergenic
TGGGGATTATTTACCCTGTA+GGG 0.530167 7_2:+19490088 None:intergenic
AATTGCTCTATGAATTTGGT+GGG 0.530259 7_2:-19489170 Msa1051840:CDS
CTGAGATGACCACTTCCCAT+TGG 0.531493 7_2:+19491172 None:intergenic
TTGAGAATACAACGATGTAA+AGG 0.532368 7_2:+19489005 None:intergenic
GTGGGGATTATTTACCCTGT+AGG 0.542017 7_2:+19490087 None:intergenic
AAGATGTGATACATTAGGCT+AGG 0.543238 7_2:-19488013 Msa1051840:three_prime_UTR
AATTTGGTGGGTACTAAAGA+AGG 0.543440 7_2:-19489158 Msa1051840:CDS
TTGTTGCCGGCAAGTCCAAT+GGG 0.543876 7_2:-19491187 Msa1051840:CDS
TAATAGCATTACTTTGGCAA+GGG 0.544635 7_2:+19489256 None:intergenic
TACGTTTGCCAACTCTGTCT+GGG 0.545380 7_2:-19490154 Msa1051840:CDS
CTTCGAGATTGACCATCGGC+TGG 0.546237 7_2:+19489135 None:intergenic
TAATTTGGCAGGGAACGCAT+TGG 0.547365 7_2:-19489204 Msa1051840:CDS
ATATGATTCTCTAGCAGTGA+AGG 0.549569 7_2:-19489927 Msa1051840:CDS
GGGAGGCGATCCTCGAGCTG+TGG 0.550478 7_2:-19488450 Msa1051840:CDS
TAATTGCTCTATGAATTTGG+TGG 0.550506 7_2:-19489171 Msa1051840:CDS
TCCGGTGTTCATCGAAACCT+TGG 0.552972 7_2:-19490887 Msa1051840:CDS
ACCTCCAAAAGCTACACTGA+TGG 0.553050 7_2:+19495634 None:intergenic
TTACATCGTTGTATTCTCAA+AGG 0.553175 7_2:-19489002 Msa1051840:CDS
ATCTTATATATAATATACTT+GGG 0.555034 7_2:+19488309 None:intergenic
CTTATGTGAACTTCTACCAA+TGG 0.555656 7_2:+19492077 None:intergenic
TACATTGGACGTTAAGGTGT+GGG 0.556800 7_2:-19490214 Msa1051840:CDS
TGAAATAAAGTTATCACAGA+AGG 0.557098 7_2:+19490189 None:intergenic
ACAAAAGCCTACCTCTTCTA+GGG 0.557197 7_2:+19492807 None:intergenic
AATGATAAATGTGCTGATTG+TGG 0.559781 7_2:-19490968 Msa1051840:CDS
AAGAGAAATCGGGACATACA+AGG 0.560937 7_2:-19495210 Msa1051840:CDS
TATTGATTTGCAAGAAGTCA+AGG 0.561136 7_2:-19494475 Msa1051840:intron
CTATAGCATTAAGAGAAATC+GGG 0.563886 7_2:-19495220 Msa1051840:CDS
AGATGTGATACATTAGGCTA+GGG 0.564629 7_2:-19488012 Msa1051840:three_prime_UTR
AATGGATCTCCTAATGGAGA+TGG 0.565937 7_2:-19492108 Msa1051840:CDS
GCAGAATGCTGCCAAGGGAA+AGG 0.568293 7_2:-19492037 Msa1051840:intron
AATGCACCTGGTCATAGATA+AGG 0.569583 7_2:+19493229 None:intergenic
TGTTAAATTGACATAAACCT+AGG 0.570433 7_2:-19498356 Msa1051840:five_prime_UTR
GGAGATGGTATACAAGCCAT+TGG 0.574707 7_2:-19492093 Msa1051840:CDS
AGTGCAGGCAGAGAGTGCGC+TGG 0.574995 7_2:-19491356 Msa1051840:intron
CCGGCAAGTCCAATGGGAAG+TGG 0.575473 7_2:-19491181 Msa1051840:CDS
AGGTTGATCTTGTCCCTACA+GGG 0.575707 7_2:-19490101 Msa1051840:intron
GTAACGAAGATGTGCATCCA+TGG 0.575869 7_2:+19492514 None:intergenic
TTGGTGATGAAAACTGTTTG+TGG 0.577029 7_2:+19489959 None:intergenic
CCTTGGTGTGCACATATCAA+AGG 0.577329 7_2:-19490870 Msa1051840:intron
AGTAATGCAGAATGCTGCCA+AGG 0.579392 7_2:-19492043 Msa1051840:CDS
GCTTGTGAAACTGCAGACAT+TGG 0.580822 7_2:-19489092 Msa1051840:CDS
CAGCCGATGGTCAATCTCGA+AGG 0.583979 7_2:-19489134 Msa1051840:CDS
TGAGTAACCAAACCTGTTTG+CGG 0.587231 7_2:+19498269 None:intergenic
GGAAGCAGTCAGTGGGACCA+TGG 0.589203 7_2:-19492531 Msa1051840:CDS
ATCTTGTACAAGATTACCAA+AGG 0.589586 7_2:+19488162 None:intergenic
ATTAATGCAACTGATTTGAG+AGG 0.591119 7_2:-19489035 Msa1051840:CDS
AGCCAGCCTTATCTATGACC+AGG 0.594107 7_2:-19493235 Msa1051840:intron
TTCTGCAGCAAGCTCAATAG+GGG 0.596919 7_2:+19488412 None:intergenic
AGATTGATCGAGAAAGTAGG+TGG 0.598984 7_2:-19492146 Msa1051840:CDS
AGTGAAGGAAAAGTTCATCC+AGG 0.603171 7_2:-19489912 Msa1051840:CDS
TTGGTCTGAGTCAAGAGCAC+TGG 0.603439 7_2:-19488107 Msa1051840:three_prime_UTR
AAGCGTTCGTCAAACTTAAG+GGG 0.604023 7_2:-19491888 Msa1051840:CDS
GGAAAAGTTCATCCAGGCAA+AGG 0.607228 7_2:-19489906 Msa1051840:intron
CACCCTTCGAGATTGACCAT+CGG 0.607292 7_2:+19489131 None:intergenic
TGATGCCCAATCTGGTTCAG+GGG 0.609198 7_2:+19490943 None:intergenic
TGAGCTCTCAGATTCCTGAA+AGG 0.609711 7_2:-19491285 Msa1051840:CDS
CCATCCTCATCCACAGCTCG+AGG 0.615689 7_2:+19488440 None:intergenic
CACCTGGTCATAGATAAGGC+TGG 0.616998 7_2:+19493233 None:intergenic
GCTAGAGAATCATATTGACC+AGG 0.617472 7_2:+19489935 None:intergenic
TGTAGCTACTGCCCTAGAAG+AGG 0.617795 7_2:-19492818 Msa1051840:intron
AGCCGATGGTCAATCTCGAA+GGG 0.620302 7_2:-19489133 Msa1051840:CDS
AGCGTTCGTCAAACTTAAGG+GGG 0.621606 7_2:-19491887 Msa1051840:CDS
TCTTGTACAAGATTACCAAA+GGG 0.622439 7_2:+19488163 None:intergenic
GCAGTCAACATTCTGGTCAG+AGG 0.624182 7_2:-19491671 Msa1051840:CDS
CAAACCTGTTTGCGGAACAT+GGG 0.624633 7_2:+19498277 None:intergenic
TACTAAAGAAGGCCAGCCGA+TGG 0.624826 7_2:-19489147 Msa1051840:CDS
TACTTTCTTCAACAGCGCAG+TGG 0.627834 7_2:+19491107 None:intergenic
AATGGAGCCGTACATTAACC+AGG 0.628214 7_2:-19492385 Msa1051840:intron
GAACAGGCAAACAATGATCA+CGG 0.629231 7_2:-19489230 Msa1051840:CDS
TTCCAGGGAAGGACTTGGAG+AGG 0.629726 7_2:-19495720 Msa1051840:intron
GTAATAATCCAGTAATACAA+AGG 0.630092 7_2:+19487929 None:intergenic
TTACATTGGACGTTAAGGTG+TGG 0.632129 7_2:-19490215 Msa1051840:CDS
GTTCACAGTGTGATGAGCAA+CGG 0.632589 7_2:+19491560 None:intergenic
AACTGCAGACATTGGAATGG+TGG 0.635357 7_2:-19489084 Msa1051840:CDS
TATTTGCGCCATATTGCAGG+AGG 0.636613 7_2:+19489057 None:intergenic
AAGAGACAGAGAAACAACGT+TGG 0.636811 7_2:+19498516 None:intergenic
TCTTTGGTGAAACAGATACA+GGG 0.637338 7_2:-19496643 Msa1051840:intron
AAGTTCCTCCCAGACAGAGT+TGG 0.637874 7_2:+19490146 None:intergenic
ATCACGGCCCTAATTTGGCA+GGG 0.637982 7_2:-19489214 Msa1051840:CDS
GTAATGTAAAATGACTGCAT+TGG 0.638084 7_2:-19488126 Msa1051840:three_prime_UTR
GGTGAAACAGATACAGGGCA+TGG 0.643702 7_2:-19496638 Msa1051840:intron
TCTGTTGTGCTACTAAGAGT+CGG 0.644075 7_2:+19489387 None:intergenic
CTCCAAAAGCTACACTGATG+GGG 0.644943 7_2:+19495636 None:intergenic
AATAGTTTACCTGTGATCGA+AGG 0.645214 7_2:+19495183 None:intergenic
TGATAAATGTGCTGATTGTG+GGG 0.646145 7_2:-19490966 Msa1051840:CDS
ACCAAGGTTTCGATGAACAC+CGG 0.647700 7_2:+19490886 None:intergenic
ATGCTCAGCAATCAAGAGAG+AGG 0.648888 7_2:-19492221 Msa1051840:CDS
GTAATGCAGAATGCTGCCAA+GGG 0.652738 7_2:-19492042 Msa1051840:CDS
GACAGATTGATCGAGAAAGT+AGG 0.661266 7_2:-19492149 Msa1051840:CDS
TGAAACTGCAGACATTGGAA+TGG 0.673767 7_2:-19489087 Msa1051840:CDS
CATCCGAATTAACAATGTAG+CGG 0.674705 7_2:+19489324 None:intergenic
CCTTTGATATGTGCACACCA+AGG 0.680873 7_2:+19490870 None:intergenic
AGGGACAAGATCAACCTGAA+AGG 0.685935 7_2:+19490107 None:intergenic
AATCTGAGAGCTCAGCAATG+AGG 0.686046 7_2:+19491294 None:intergenic
TCTTTGTTGGTGAAATGATG+CGG 0.687553 7_2:+19491481 None:intergenic
TAGGTTCAGACTATTCGACA+AGG 0.690633 7_2:-19491921 Msa1051840:CDS
GATTGATCGAGAAAGTAGGT+GGG 0.696174 7_2:-19492145 Msa1051840:CDS
GCGTTCGTCAAACTTAAGGG+GGG 0.699525 7_2:-19491886 Msa1051840:CDS
TAGTGAATTTGGTCATAACA+GGG 0.703666 7_2:+19495240 None:intergenic
GTTTGCCAACTCTGTCTGGG+AGG 0.706516 7_2:-19490151 Msa1051840:CDS
GAAACAGATACAGGGCATGG+AGG 0.706928 7_2:-19496635 Msa1051840:intron
AGTAGCACAACAGATCTGGG+AGG 0.753828 7_2:-19489378 Msa1051840:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTTTAAAAATTAATTT+TGG - chr7_2:19488330-19488349 Msa1051840:three_prime_UTR 0.0%
!! AATATGAATTTACATATATT+TGG + chr7_2:19489247-19489266 None:intergenic 10.0%
!!! TTTTTAGTTAAAACTTAAAA+GGG + chr7_2:19490214-19490233 None:intergenic 10.0%
!!! ATTTTTAGTTAAAACTTAAA+AGG + chr7_2:19490215-19490234 None:intergenic 10.0%
!!! ATATATTATATTTCTATGTT+TGG + chr7_2:19491656-19491675 None:intergenic 10.0%
!! TAATATTAGTAAACATTATT+AGG + chr7_2:19491948-19491967 None:intergenic 10.0%
!! TAATAATGTTTACTAATATT+AGG - chr7_2:19491947-19491966 Msa1051840:intron 10.0%
!! TTCTATAAAAAATAATATCA+TGG - chr7_2:19492341-19492360 Msa1051840:intron 10.0%
!! TCTATAAAAAATAATATCAT+GGG - chr7_2:19492342-19492361 Msa1051840:intron 10.0%
!! TAAGTTTCATAATTTATATA+TGG - chr7_2:19493205-19493224 Msa1051840:intron 10.0%
!!! TTATTTTTCTTTATCATTTT+AGG - chr7_2:19494577-19494596 Msa1051840:intron 10.0%
!! CTAAAGTTAATATTAAAAAA+AGG + chr7_2:19495977-19495996 None:intergenic 10.0%
!!! TTTTTTAATATTAACTTTAG+TGG - chr7_2:19495977-19495996 Msa1051840:intron 10.0%
!! TAAAATATAACAACAATAAT+GGG + chr7_2:19496478-19496497 None:intergenic 10.0%
!! TTAAAATATAACAACAATAA+TGG + chr7_2:19496479-19496498 None:intergenic 10.0%
!! TTAATATATGTGAAAATATA+AGG - chr7_2:19497982-19498001 Msa1051840:intron 10.0%
!! ATCTTATATATAATATACTT+GGG + chr7_2:19498211-19498230 None:intergenic 10.0%
!! TATCTTATATATAATATACT+TGG + chr7_2:19498212-19498231 None:intergenic 10.0%
!! AAAAAAAAACCTTAAATCAA+GGG + chr7_2:19488452-19488471 None:intergenic 15.0%
!! AAAAAAAAAACCTTAAATCA+AGG + chr7_2:19488453-19488472 None:intergenic 15.0%
!! CTAATAAAATTATTTGTGAA+TGG - chr7_2:19489644-19489663 Msa1051840:intron 15.0%
!!! ATCAATAAATTTTGATAATG+AGG + chr7_2:19489989-19490008 None:intergenic 15.0%
!! ATATTATTTGTTTATCTTTC+AGG - chr7_2:19490450-19490469 Msa1051840:intron 15.0%
!!! TAGCAGTTTTTAATAAAAAA+TGG + chr7_2:19491041-19491060 None:intergenic 15.0%
!! TAAGTAAATTAATTCTTCAT+CGG - chr7_2:19492823-19492842 Msa1051840:CDS 15.0%
!!! TATATATGGATTTGTTATAA+TGG - chr7_2:19493219-19493238 Msa1051840:intron 15.0%
!! TTAAAAAAATAAATGCTTCA+AGG + chr7_2:19493525-19493544 None:intergenic 15.0%
!! AAAGATTAAAATAAACCAAT+GGG + chr7_2:19494559-19494578 None:intergenic 15.0%
!! TAAAGATTAAAATAAACCAA+TGG + chr7_2:19494560-19494579 None:intergenic 15.0%
!! ATAACATATACAATGATAAA+GGG + chr7_2:19495692-19495711 None:intergenic 15.0%
!! TATAACATATACAATGATAA+AGG + chr7_2:19495693-19495712 None:intergenic 15.0%
!! AAAATTATGCATGTTTAAAT+TGG - chr7_2:19496080-19496099 Msa1051840:intron 15.0%
!! TAGTATCAAATAAGATATTT+CGG + chr7_2:19496198-19496217 None:intergenic 15.0%
!! TAGACATTTAAAAAATATGT+TGG + chr7_2:19496965-19496984 None:intergenic 15.0%
!! TTAAGAAGAAAAATTCAAAT+GGG + chr7_2:19497735-19497754 None:intergenic 15.0%
!! TTTAAGAAGAAAAATTCAAA+TGG + chr7_2:19497736-19497755 None:intergenic 15.0%
!!! TAAAATTAGAGGTATATTTT+GGG + chr7_2:19497935-19497954 None:intergenic 15.0%
!!! TTTAATGTATCTAAAATTAG+AGG + chr7_2:19497946-19497965 None:intergenic 15.0%
!!! ATGTTTTTTTGTTTTGTTTA+AGG - chr7_2:19498278-19498297 Msa1051840:intron 15.0%
!!! TTAGTGTTTATTTTGTTCTA+AGG - chr7_2:19488666-19488685 Msa1051840:intron 20.0%
!!! TAAGGAAAATTTGAAATTGA+TGG - chr7_2:19488684-19488703 Msa1051840:intron 20.0%
!! TATGTAAATTCATATTTCAC+AGG - chr7_2:19489251-19489270 Msa1051840:CDS 20.0%
!!! ATAACAGCATGTTTTATATA+AGG + chr7_2:19489303-19489322 None:intergenic 20.0%
!! AAATAAAGTGTAAGATAAAC+AGG + chr7_2:19489328-19489347 None:intergenic 20.0%
!!! AGATTTTATTTACCAAAAGT+GGG + chr7_2:19489452-19489471 None:intergenic 20.0%
!!! TAGATTTTATTTACCAAAAG+TGG + chr7_2:19489453-19489472 None:intergenic 20.0%
!! AAATAAAATCTAACACAGAT+AGG - chr7_2:19489461-19489480 Msa1051840:intron 20.0%
!!! AAATAATTTTATTAGCCTAC+AGG + chr7_2:19489639-19489658 None:intergenic 20.0%
!! ATAAAATTATTTGTGAATGG+TGG - chr7_2:19489647-19489666 Msa1051840:intron 20.0%
!! ATAAAATCTCAAACAATTAG+GGG + chr7_2:19489767-19489786 None:intergenic 20.0%
!! CATAAAATCTCAAACAATTA+GGG + chr7_2:19489768-19489787 None:intergenic 20.0%
!! ACATAAAATCTCAAACAATT+AGG + chr7_2:19489769-19489788 None:intergenic 20.0%
!!! AGAAGTTTGAAATTTTACAA+GGG - chr7_2:19489928-19489947 Msa1051840:CDS 20.0%
!! TTAAGAAAGTTAAAACACTA+AGG + chr7_2:19490257-19490276 None:intergenic 20.0%
!! TAAGTAGTTTCAAAATTCAA+AGG + chr7_2:19490290-19490309 None:intergenic 20.0%
!!! ATTTATTTTCAACTTTACTG+AGG - chr7_2:19490475-19490494 Msa1051840:intron 20.0%
!!! TCTATTTTAAATGCGTTATT+CGG + chr7_2:19491403-19491422 None:intergenic 20.0%
!! AAAATAGAGAGAAATTGAAA+AGG - chr7_2:19491415-19491434 Msa1051840:intron 20.0%
!! ATATTTAGCAGTAAACTATT+TGG - chr7_2:19491584-19491603 Msa1051840:CDS 20.0%
!! ATAGAATATGATTACACAAT+AGG - chr7_2:19491696-19491715 Msa1051840:intron 20.0%
!! AATAAGTTACTAGATAAATG+GGG + chr7_2:19491835-19491854 None:intergenic 20.0%
!! GAATAAGTTACTAGATAAAT+GGG + chr7_2:19491836-19491855 None:intergenic 20.0%
!! AGAATAAGTTACTAGATAAA+TGG + chr7_2:19491837-19491856 None:intergenic 20.0%
!!! TTGTATATTTCTAAAGTAGT+AGG - chr7_2:19492162-19492181 Msa1051840:CDS 20.0%
!!! TTGTTTCTTTGTTTAGATTT+AGG - chr7_2:19492235-19492254 Msa1051840:intron 20.0%
!!! TGTTTCTTTGTTTAGATTTA+GGG - chr7_2:19492236-19492255 Msa1051840:intron 20.0%
!! ATAAAAAATAATATCATGGG+TGG - chr7_2:19492345-19492364 Msa1051840:intron 20.0%
!! TGCTAATAGTTTATTAGTAA+AGG + chr7_2:19492776-19492795 None:intergenic 20.0%
!! TAAACATGACACTTAATATT+AGG - chr7_2:19492880-19492899 Msa1051840:intron 20.0%
!! CAAAACATTGAAGAAATTAT+TGG - chr7_2:19493002-19493021 Msa1051840:intron 20.0%
!! TGGAAGTTTATGTTATATTA+AGG - chr7_2:19494192-19494211 Msa1051840:intron 20.0%
!! GGAAGTTTATGTTATATTAA+GGG - chr7_2:19494193-19494212 Msa1051840:intron 20.0%
!!! AAATTTGTTACAAAGAAACA+TGG + chr7_2:19494784-19494803 None:intergenic 20.0%
!! AATTTCATCTGATATTATTG+TGG - chr7_2:19494799-19494818 Msa1051840:intron 20.0%
!! TTTAGTTACATTGTAAAAGT+TGG + chr7_2:19495906-19495925 None:intergenic 20.0%
!! TGTTTAAATTGGTTGTTTAT+AGG - chr7_2:19496091-19496110 Msa1051840:intron 20.0%
!! GTTTAAATTGGTTGTTTATA+GGG - chr7_2:19496092-19496111 Msa1051840:intron 20.0%
!! AAAAAATATACCAATTGAGA+GGG + chr7_2:19496255-19496274 None:intergenic 20.0%
!! AAAAAAATATACCAATTGAG+AGG + chr7_2:19496256-19496275 None:intergenic 20.0%
!!! TAACTTTATGTAATGGTTTT+TGG - chr7_2:19497581-19497600 Msa1051840:intron 20.0%
!!! CTAAAATTAGAGGTATATTT+TGG + chr7_2:19497936-19497955 None:intergenic 20.0%
!! AAAAATAAACCAATGTACAT+AGG + chr7_2:19498541-19498560 None:intergenic 20.0%
! TGTTAAATTGACATAAACCT+AGG - chr7_2:19488161-19488180 Msa1051840:three_prime_UTR 25.0%
! TTGTATGTGTAATGAATGTA+AGG - chr7_2:19488355-19488374 Msa1051840:exon 25.0%
! AATGTAAGGTGAATTTCATT+GGG - chr7_2:19488369-19488388 Msa1051840:CDS 25.0%
! TTAAGTTTACCCTTGATTTA+AGG - chr7_2:19488440-19488459 Msa1051840:CDS 25.0%
! TCATAGTTTCAAACTATGAT+AGG - chr7_2:19488568-19488587 Msa1051840:intron 25.0%
!! ATTTATGCCTATAGCTTTTA+CGG - chr7_2:19488876-19488895 Msa1051840:intron 25.0%
!! AAATAAGTACTGTCAAATAG+CGG - chr7_2:19489028-19489047 Msa1051840:CDS 25.0%
! CTTTGAACTAAATAACCTAT+CGG + chr7_2:19489092-19489111 None:intergenic 25.0%
!! ACATATATTTGGTTCAGAAT+TGG + chr7_2:19489236-19489255 None:intergenic 25.0%
! ATAAGGATAAGTTCAGTTAT+AGG + chr7_2:19489286-19489305 None:intergenic 25.0%
! TCGTTGAAATGATAAAATCT+TGG - chr7_2:19489385-19489404 Msa1051840:CDS 25.0%
! CGTTGAAATGATAAAATCTT+GGG - chr7_2:19489386-19489405 Msa1051840:CDS 25.0%
! TGTCAGAATATTGTATTTGT+AGG - chr7_2:19489799-19489818 Msa1051840:intron 25.0%
!!! TTGTCTGTCTTTTAATTCTT+TGG - chr7_2:19489858-19489877 Msa1051840:intron 25.0%
!!! GAGAAGTTTGAAATTTTACA+AGG - chr7_2:19489927-19489946 Msa1051840:CDS 25.0%
!!! GTTTTTTTCTTTTCAACTGT+TGG - chr7_2:19490110-19490129 Msa1051840:CDS 25.0%
! AGTTTCAAAATTCAAAGGTT+TGG + chr7_2:19490285-19490304 None:intergenic 25.0%
!! CTTGATTTTTACTCAAGATT+TGG + chr7_2:19490511-19490530 None:intergenic 25.0%
! AATCTTGAGTAAAAATCAAG+AGG - chr7_2:19490511-19490530 Msa1051840:intron 25.0%
!!! AATCAAGAGGTTTTTTTATG+AGG - chr7_2:19490524-19490543 Msa1051840:intron 25.0%
!! AAAATTTTCCTTTCGATGAT+GGG + chr7_2:19490643-19490662 None:intergenic 25.0%
!! TAAAATTTTCCTTTCGATGA+TGG + chr7_2:19490644-19490663 None:intergenic 25.0%
!!! ATCGAAAGGAAAATTTTAGT+GGG - chr7_2:19490646-19490665 Msa1051840:intron 25.0%
! AAAGTAAAATGACAGCATTT+AGG + chr7_2:19490779-19490798 None:intergenic 25.0%
! ATCTATTAAGAAAGACATTG+AGG + chr7_2:19491018-19491037 None:intergenic 25.0%
! ACATCATGATAATCAAATCA+TGG + chr7_2:19491189-19491208 None:intergenic 25.0%
! TCTTAATGCTATAGTGAATT+TGG + chr7_2:19491291-19491310 None:intergenic 25.0%
! ACTATAGCATTAAGAGAAAT+CGG - chr7_2:19491296-19491315 Msa1051840:CDS 25.0%
! TCTTCATTCATCCAAAAAAA+AGG - chr7_2:19491468-19491487 Msa1051840:CDS 25.0%
! TTCATCCAAAAAAAAGGAAA+AGG - chr7_2:19491474-19491493 Msa1051840:CDS 25.0%
! CTAAATATTGTAATGTGGTT+CGG + chr7_2:19491572-19491591 None:intergenic 25.0%
! TACTGCTAAATATTGTAATG+TGG + chr7_2:19491577-19491596 None:intergenic 25.0%
!! TATATTTCTATGTTTGGTAC+CGG + chr7_2:19491650-19491669 None:intergenic 25.0%
! CACATTACTATAATAATTGC+TGG - chr7_2:19491904-19491923 Msa1051840:CDS 25.0%
!!! TAAACTTTGCTTTAGTTTGT+AGG + chr7_2:19492116-19492135 None:intergenic 25.0%
!!! TTGTTTAGATTTAGGGTTTT+AGG - chr7_2:19492243-19492262 Msa1051840:intron 25.0%
! TTCTTGTGATCATAACAAAT+AGG - chr7_2:19492545-19492564 Msa1051840:CDS 25.0%
! GAGAGAATATATTCTGATAT+GGG + chr7_2:19492594-19492613 None:intergenic 25.0%
! AGAGAGAATATATTCTGATA+TGG + chr7_2:19492595-19492614 None:intergenic 25.0%
! AAACTATTAGCAGAATAGTT+AGG - chr7_2:19492784-19492803 Msa1051840:intron 25.0%
!!! TTTTCCATTTCTGAAGTTTT+TGG - chr7_2:19493095-19493114 Msa1051840:intron 25.0%
!!! TTTCCATTTCTGAAGTTTTT+GGG - chr7_2:19493096-19493115 Msa1051840:intron 25.0%
!! TTGATAGTCTATAGAAACTT+TGG + chr7_2:19493129-19493148 None:intergenic 25.0%
! TTCTATAGACTATCAAAACT+AGG - chr7_2:19493133-19493152 Msa1051840:intron 25.0%
! ACACTTACAAAATCTTAACA+TGG + chr7_2:19493169-19493188 None:intergenic 25.0%
!! ATTATAAAGCATTTGGAGAT+AGG + chr7_2:19493314-19493333 None:intergenic 25.0%
!! CGACAAAATTATAAAGCATT+TGG + chr7_2:19493321-19493340 None:intergenic 25.0%
!! CAAATCCAAATTTTAAACTC+AGG + chr7_2:19493362-19493381 None:intergenic 25.0%
!!! TTTTTTAACAATTTACCCCT+TGG - chr7_2:19493537-19493556 Msa1051840:intron 25.0%
! TTAAAAAATCCAATACCAAG+GGG + chr7_2:19493555-19493574 None:intergenic 25.0%
! GTTAAAAAATCCAATACCAA+GGG + chr7_2:19493556-19493575 None:intergenic 25.0%
! TGTTAAAAAATCCAATACCA+AGG + chr7_2:19493557-19493576 None:intergenic 25.0%
!!! TTTGCAGTTTTGAATATTGT+AGG + chr7_2:19493592-19493611 None:intergenic 25.0%
!!! AAAGAAGAGATTTGAGTTTT+TGG - chr7_2:19493965-19493984 Msa1051840:intron 25.0%
! TTTGATTCATTTCACTTGTA+GGG - chr7_2:19494091-19494110 Msa1051840:intron 25.0%
! GTATGAACTATTACATCAAA+TGG - chr7_2:19494114-19494133 Msa1051840:intron 25.0%
!! TTTTAAACCTGGTTAATGTA+CGG + chr7_2:19494142-19494161 None:intergenic 25.0%
!! TTTTAAACCCTTTAATTACG+TGG - chr7_2:19494172-19494191 Msa1051840:intron 25.0%
! TAAACTTCCACGTAATTAAA+GGG + chr7_2:19494182-19494201 None:intergenic 25.0%
! ATAAACTTCCACGTAATTAA+AGG + chr7_2:19494183-19494202 None:intergenic 25.0%
! AGTTTATGTTATATTAAGGG+TGG - chr7_2:19494196-19494215 Msa1051840:intron 25.0%
!! ATCATTTGCATTTTCACTAT+GGG + chr7_2:19494241-19494260 None:intergenic 25.0%
!! AATCATTTGCATTTTCACTA+TGG + chr7_2:19494242-19494261 None:intergenic 25.0%
! GTTTAATGTGAACAATAAGT+TGG - chr7_2:19494738-19494757 Msa1051840:intron 25.0%
!! AATAGTGTTTTATCCGTATA+AGG - chr7_2:19495093-19495112 Msa1051840:intron 25.0%
! CTTTAATCACAATCCTTATA+CGG + chr7_2:19495109-19495128 None:intergenic 25.0%
!!! TTTTTTCAATCCAATCCATT+TGG + chr7_2:19495188-19495207 None:intergenic 25.0%
!!! TGGTTTTTCACTTTTATTAC+AGG + chr7_2:19495502-19495521 None:intergenic 25.0%
! TTTAGTGGTTAAAACTGTAA+TGG - chr7_2:19495992-19496011 Msa1051840:intron 25.0%
! TGAAATAAAGTTATCACAGA+AGG + chr7_2:19496331-19496350 None:intergenic 25.0%
!! ATAACTTTATTTCAGTCTCT+TGG - chr7_2:19496337-19496356 Msa1051840:intron 25.0%
!! TAACTTTATTTCAGTCTCTT+GGG - chr7_2:19496338-19496357 Msa1051840:intron 25.0%
! AGTAATGCAAAGATAATAGT+GGG + chr7_2:19496451-19496470 None:intergenic 25.0%
! AAGTAATGCAAAGATAATAG+TGG + chr7_2:19496452-19496471 None:intergenic 25.0%
!! TCATACAAGTAACTTTTTAC+AGG + chr7_2:19496692-19496711 None:intergenic 25.0%
!!! TATGATTCTGATTGGTTTTT+TGG - chr7_2:19496707-19496726 Msa1051840:intron 25.0%
!!! ATTGGTTTTTTGGAAAATGA+TGG - chr7_2:19496717-19496736 Msa1051840:intron 25.0%
! GAAACTGAAGAAAATGATAT+AGG - chr7_2:19496802-19496821 Msa1051840:intron 25.0%
! TTAAAAAATATGTTGGCAGA+GGG + chr7_2:19496958-19496977 None:intergenic 25.0%
! TTTAAAAAATATGTTGGCAG+AGG + chr7_2:19496959-19496978 None:intergenic 25.0%
!!! TTCTGTTTTTTTAAATCCCT+TGG - chr7_2:19497060-19497079 Msa1051840:intron 25.0%
! TTCTTGTAATAGCATTACTT+TGG + chr7_2:19497270-19497289 None:intergenic 25.0%
! TTCTAATTGCTCTATGAATT+TGG - chr7_2:19497343-19497362 Msa1051840:intron 25.0%
!! TGACCATTTCAAGTATTAAT+GGG - chr7_2:19497648-19497667 Msa1051840:intron 25.0%
! TCAAATGGGACTTATATTTA+GGG + chr7_2:19497721-19497740 None:intergenic 25.0%
! TTCAAATGGGACTTATATTT+AGG + chr7_2:19497722-19497741 None:intergenic 25.0%
! AACACATCTATATACATGAA+AGG - chr7_2:19497856-19497875 Msa1051840:intron 25.0%
! ACACATCTATATACATGAAA+GGG - chr7_2:19497857-19497876 Msa1051840:intron 25.0%
!!! ATATACATGAAAGGGTATTT+TGG - chr7_2:19497865-19497884 Msa1051840:intron 25.0%
!!! TTTTTAACTCTTCATACTAG+CGG + chr7_2:19498309-19498328 None:intergenic 25.0%
! AACATTACTAAATTGTTGCT+TGG + chr7_2:19498449-19498468 None:intergenic 25.0%
!!! CATTGGTTTATTTTTGTGAA+AGG - chr7_2:19498546-19498565 Msa1051840:five_prime_UTR 25.0%
!!! TATTTTTGTGAAAGGTTTTG+TGG - chr7_2:19498554-19498573 Msa1051840:five_prime_UTR 25.0%
!!! TTTTTTCACCTTTGTATTAC+TGG - chr7_2:19498580-19498599 Msa1051840:five_prime_UTR 25.0%
! GTAATAATCCAGTAATACAA+AGG + chr7_2:19498591-19498610 None:intergenic 25.0%
! TGTATTACTGGATTATTACT+TGG - chr7_2:19498592-19498611 Msa1051840:five_prime_UTR 25.0%
!!! ACTTTCACTGGTTTTGAATT+TGG + chr7_2:19488076-19488095 None:intergenic 30.0%
!!! TTCACTTTTTTCACTTTCAC+TGG + chr7_2:19488088-19488107 None:intergenic 30.0%
CTCAAAAAACGATAATTCCT+AGG + chr7_2:19488181-19488200 None:intergenic 30.0%
!!! CTAGGAATTATCGTTTTTTG+AGG - chr7_2:19488179-19488198 Msa1051840:three_prime_UTR 30.0%
GAATGTAAGGTGAATTTCAT+TGG - chr7_2:19488368-19488387 Msa1051840:CDS 30.0%
! ATTGATGGCTTGATGATAAA+TGG - chr7_2:19488699-19488718 Msa1051840:intron 30.0%
AAAGTAACCGTAAAAGCTAT+AGG + chr7_2:19488886-19488905 None:intergenic 30.0%
! TACTTATTTCTCCTTGTTCA+GGG + chr7_2:19489017-19489036 None:intergenic 30.0%
!! ATTTAGTTCAAAGTGTTGTC+AGG - chr7_2:19489099-19489118 Msa1051840:CDS 30.0%
! TATTTGGTTCAGAATTGGAA+GGG + chr7_2:19489231-19489250 None:intergenic 30.0%
! ATATTTGGTTCAGAATTGGA+AGG + chr7_2:19489232-19489251 None:intergenic 30.0%
!! AGCAGTATTTTTGCAGTTTA+GGG + chr7_2:19489352-19489371 None:intergenic 30.0%
!! AAGCAGTATTTTTGCAGTTT+AGG + chr7_2:19489353-19489372 None:intergenic 30.0%
! TAAATAGCCATGAACTTTTG+TGG - chr7_2:19490008-19490027 Msa1051840:intron 30.0%
AACTTATGATCACATCAATG+TGG + chr7_2:19490360-19490379 None:intergenic 30.0%
!!! GGAAAGAATTTTGGAATTTG+TGG + chr7_2:19490410-19490429 None:intergenic 30.0%
! CATCTGAAAGGAAAGAATTT+TGG + chr7_2:19490419-19490438 None:intergenic 30.0%
! AAAGCATTAATACTGCTTAG+TGG - chr7_2:19490554-19490573 Msa1051840:intron 30.0%
TTTGTGTATTCTATTCTCCA+TGG - chr7_2:19490578-19490597 Msa1051840:intron 30.0%
! CATCGAAAGGAAAATTTTAG+TGG - chr7_2:19490645-19490664 Msa1051840:intron 30.0%
!!! GGAAAATTTTAGTGGGTTAA+TGG - chr7_2:19490653-19490672 Msa1051840:intron 30.0%
ATGCTTAAGATGGTTAATGA+AGG - chr7_2:19490930-19490949 Msa1051840:CDS 30.0%
TGCTTAAGATGGTTAATGAA+GGG - chr7_2:19490931-19490950 Msa1051840:CDS 30.0%
TTGACTAATGTTATCTGTCA+AGG - chr7_2:19491088-19491107 Msa1051840:CDS 30.0%
TAGTGAATTTGGTCATAACA+GGG + chr7_2:19491280-19491299 None:intergenic 30.0%
ATAGTGAATTTGGTCATAAC+AGG + chr7_2:19491281-19491300 None:intergenic 30.0%
CTATAGCATTAAGAGAAATC+GGG - chr7_2:19491297-19491316 Msa1051840:CDS 30.0%
AATGAAGAATAGAGAGTGAT+TGG + chr7_2:19491456-19491475 None:intergenic 30.0%
! GACTACCTTTTCCTTTTTTT+TGG + chr7_2:19491482-19491501 None:intergenic 30.0%
ACTGTCAAAGCATAATACTT+AGG - chr7_2:19491544-19491563 Msa1051840:CDS 30.0%
CTGTCAAAGCATAATACTTA+GGG - chr7_2:19491545-19491564 Msa1051840:CDS 30.0%
TGTCAAAGCATAATACTTAG+GGG - chr7_2:19491546-19491565 Msa1051840:CDS 30.0%
! TTTGGAAATGGATATTGGTT+AGG + chr7_2:19491782-19491801 None:intergenic 30.0%
TTTCGTTTGGAAATGGATAT+TGG + chr7_2:19491787-19491806 None:intergenic 30.0%
ATGTGCAACAGTTATGTATT+AGG + chr7_2:19491889-19491908 None:intergenic 30.0%
AAGAAAGCAAACTATGTGTT+AGG + chr7_2:19491973-19491992 None:intergenic 30.0%
GCAAATCAATATTGACAAAC+TGG + chr7_2:19492033-19492052 None:intergenic 30.0%
!! TATTGATTTGCAAGAAGTCA+AGG - chr7_2:19492042-19492061 Msa1051840:CDS 30.0%
CATCTTAATGATAGGGTAAT+AGG + chr7_2:19492093-19492112 None:intergenic 30.0%
TTGTAGGCATCTTAATGATA+GGG + chr7_2:19492100-19492119 None:intergenic 30.0%
TTTGTAGGCATCTTAATGAT+AGG + chr7_2:19492101-19492120 None:intergenic 30.0%
TATATTATCCCAACAGCTAT+TGG - chr7_2:19492402-19492421 Msa1051840:CDS 30.0%
ATATTATCCCAACAGCTATT+GGG - chr7_2:19492403-19492422 Msa1051840:CDS 30.0%
! CAACAAAGCTCATTTTATGA+TGG + chr7_2:19492743-19492762 None:intergenic 30.0%
TATTAGCAGAATAGTTAGGA+GGG - chr7_2:19492788-19492807 Msa1051840:intron 30.0%
!! TGACAATTGTGTCATTTAGT+TGG - chr7_2:19492942-19492961 Msa1051840:intron 30.0%
!! GATGTATTTGAGAAGTATCA+AGG - chr7_2:19492968-19492987 Msa1051840:intron 30.0%
! TTCCTCCTGAGTTTAAAATT+TGG - chr7_2:19493354-19493373 Msa1051840:intron 30.0%
! ATCCAAATTTTAAACTCAGG+AGG + chr7_2:19493359-19493378 None:intergenic 30.0%
GGCAATCATTAGAGAAAAAA+CGG + chr7_2:19493616-19493635 None:intergenic 30.0%
AAGTTTCTTTCACTGAGAAA+AGG - chr7_2:19493664-19493683 Msa1051840:intron 30.0%
! ACATGTTTTGTGCATGATAT+AGG - chr7_2:19493784-19493803 Msa1051840:intron 30.0%
! GAGACTCTTCAAGTTTATTT+GGG + chr7_2:19493912-19493931 None:intergenic 30.0%
! AGAGACTCTTCAAGTTTATT+TGG + chr7_2:19493913-19493932 None:intergenic 30.0%
AATGTTGTGACAAAGACTAT+GGG + chr7_2:19494065-19494084 None:intergenic 30.0%
CTTTGATTCATTTCACTTGT+AGG - chr7_2:19494090-19494109 Msa1051840:intron 30.0%
TTGATTCATTTCACTTGTAG+GGG - chr7_2:19494092-19494111 Msa1051840:intron 30.0%
AGACCTGCAAAATAATTAAC+CGG + chr7_2:19494270-19494289 None:intergenic 30.0%
!! GTTATTTTACTTTCTCCCAT+TGG - chr7_2:19494541-19494560 Msa1051840:intron 30.0%
!! GATTTTTCGTTCTTGATAGT+CGG - chr7_2:19494666-19494685 Msa1051840:intron 30.0%
!! ATTTTTCGTTCTTGATAGTC+GGG - chr7_2:19494667-19494686 Msa1051840:intron 30.0%
CACATTAAACTTCTTACAGA+TGG + chr7_2:19494728-19494747 None:intergenic 30.0%
TTTGTTACAAAGAAACATGG+CGG + chr7_2:19494781-19494800 None:intergenic 30.0%
GATTGGATTGAAAAAATCAC+AGG - chr7_2:19495192-19495211 Msa1051840:intron 30.0%
CTGACTAATTCATTGTTGTA+TGG + chr7_2:19495282-19495301 None:intergenic 30.0%
!! AATGATAAATGTGCTGATTG+TGG - chr7_2:19495549-19495568 Msa1051840:intron 30.0%
!! ATGATAAATGTGCTGATTGT+GGG - chr7_2:19495550-19495569 Msa1051840:intron 30.0%
ACATGTGAATATCATTTGTG+AGG - chr7_2:19495731-19495750 Msa1051840:intron 30.0%
GTTAAGACAAGATACATACA+TGG + chr7_2:19495815-19495834 None:intergenic 30.0%
TGTATGTATCTTGTCTTAAC+TGG - chr7_2:19495815-19495834 Msa1051840:intron 30.0%
GTATGTATCTTGTCTTAACT+GGG - chr7_2:19495816-19495835 Msa1051840:intron 30.0%
TATGTATCTTGTCTTAACTG+GGG - chr7_2:19495817-19495836 Msa1051840:intron 30.0%
!!! TTTTTTCTCCATTCTGTTGT+AGG - chr7_2:19496270-19496289 Msa1051840:intron 30.0%
GTAATGCAAAGATAATAGTG+GGG + chr7_2:19496450-19496469 None:intergenic 30.0%
ATGTGTATATCAGGAATACT+TGG + chr7_2:19496502-19496521 None:intergenic 30.0%
TTAGCGAAAATGTGTATATC+AGG + chr7_2:19496511-19496530 None:intergenic 30.0%
TTTACATAAGCTCTTGCTAA+TGG - chr7_2:19496640-19496659 Msa1051840:intron 30.0%
GTTACTTGTATGATTCTGAT+TGG - chr7_2:19496699-19496718 Msa1051840:intron 30.0%
!! TTTTGGAAAATGATGGAGAA+TGG - chr7_2:19496724-19496743 Msa1051840:intron 30.0%
AAAAACAGAAATATGACTCG+TGG + chr7_2:19497050-19497069 None:intergenic 30.0%
ATTAACAATGTAGCGGTATA+CGG + chr7_2:19497189-19497208 None:intergenic 30.0%
ATACCGCTACATTGTTAATT+CGG - chr7_2:19497190-19497209 Msa1051840:intron 30.0%
TAATAGCATTACTTTGGCAA+GGG + chr7_2:19497264-19497283 None:intergenic 30.0%
AGTAATGCTATTACAAGAAC+AGG - chr7_2:19497271-19497290 Msa1051840:intron 30.0%
TAATTGCTCTATGAATTTGG+TGG - chr7_2:19497346-19497365 Msa1051840:intron 30.0%
AATTGCTCTATGAATTTGGT+GGG - chr7_2:19497347-19497366 Msa1051840:intron 30.0%
!! ATTAATGCAACTGATTTGAG+AGG - chr7_2:19497482-19497501 Msa1051840:intron 30.0%
TTGAGAATACAACGATGTAA+AGG + chr7_2:19497515-19497534 None:intergenic 30.0%
TTACATCGTTGTATTCTCAA+AGG - chr7_2:19497515-19497534 Msa1051840:intron 30.0%
AGTGTGGTAACTTTATGTAA+TGG - chr7_2:19497574-19497593 Msa1051840:intron 30.0%
! GTGACCATTTCAAGTATTAA+TGG - chr7_2:19497647-19497666 Msa1051840:intron 30.0%
TAGCCCATTAATACTTGAAA+TGG + chr7_2:19497654-19497673 None:intergenic 30.0%
CACTTTGTAGCATTAATTAG+AGG + chr7_2:19497810-19497829 None:intergenic 30.0%
! ATTAATGCTACAAAGTGTCT+TGG - chr7_2:19497813-19497832 Msa1051840:intron 30.0%
AATATAAGGAGTTCTATCCA+TGG - chr7_2:19497996-19498015 Msa1051840:intron 30.0%
! TTTTCACAATTCATGAACCA+TGG + chr7_2:19498016-19498035 None:intergenic 30.0%
CATCCATTAGAATCATTTGA+TGG + chr7_2:19498161-19498180 None:intergenic 30.0%
ACACTAATAAGAAAACTCTC+TGG - chr7_2:19498181-19498200 Msa1051840:intron 30.0%
GCTAGTATGAAGAGTTAAAA+AGG - chr7_2:19498308-19498327 Msa1051840:exon 30.0%
TCTTGTACAAGATTACCAAA+GGG + chr7_2:19498357-19498376 None:intergenic 30.0%
ATCTTGTACAAGATTACCAA+AGG + chr7_2:19498358-19498377 None:intergenic 30.0%
GTAATGTAAAATGACTGCAT+TGG - chr7_2:19498391-19498410 Msa1051840:five_prime_UTR 30.0%
TGATGAAGATGTGATACATT+AGG - chr7_2:19498499-19498518 Msa1051840:five_prime_UTR 30.0%
TAAGGTGAATTTCATTGGGT+AGG - chr7_2:19488373-19488392 Msa1051840:CDS 35.0%
AAGGTGAATTTCATTGGGTA+GGG - chr7_2:19488374-19488393 Msa1051840:CDS 35.0%
!! ATTGATGTGTTGGTGATAGT+TGG - chr7_2:19488403-19488422 Msa1051840:CDS 35.0%
TTCAACGTAATCACATGTGT+CGG + chr7_2:19488543-19488562 None:intergenic 35.0%
ACTGACATATACAAGAACAC+CGG + chr7_2:19488632-19488651 None:intergenic 35.0%
TTGTATATGTCAGTGTTTCG+TGG - chr7_2:19488638-19488657 Msa1051840:intron 35.0%
TGTATATGTCAGTGTTTCGT+GGG - chr7_2:19488639-19488658 Msa1051840:intron 35.0%
! CACTAAAGTACTTTGCATAG+CGG - chr7_2:19488764-19488783 Msa1051840:intron 35.0%
TCATAGACTGAGATTTAGAC+AGG - chr7_2:19488948-19488967 Msa1051840:intron 35.0%
CATAGACTGAGATTTAGACA+GGG - chr7_2:19488949-19488968 Msa1051840:intron 35.0%
! GTACTTATTTCTCCTTGTTC+AGG + chr7_2:19489018-19489037 None:intergenic 35.0%
! ATTGGAAGGGTGGATATTTT+GGG + chr7_2:19489218-19489237 None:intergenic 35.0%
! AATTGGAAGGGTGGATATTT+TGG + chr7_2:19489219-19489238 None:intergenic 35.0%
! AAGCAATGTTATCCCACTTT+TGG - chr7_2:19489437-19489456 Msa1051840:intron 35.0%
TCAAAATAACCGAACTGACT+TGG + chr7_2:19489489-19489508 None:intergenic 35.0%
GCATGATTTAACGAAGAAAC+AGG + chr7_2:19489530-19489549 None:intergenic 35.0%
GTTTCTTCGTTAAATCATGC+TGG - chr7_2:19489530-19489549 Msa1051840:intron 35.0%
TGGTAGAACGATATGATAAC+TGG - chr7_2:19489611-19489630 Msa1051840:intron 35.0%
ATATGATAACTGGAACCTGT+AGG - chr7_2:19489621-19489640 Msa1051840:intron 35.0%
TGGTGGTTAGAGCTAATTAT+TGG - chr7_2:19489664-19489683 Msa1051840:intron 35.0%
AAGATCAGCATCTATGTTGA+AGG + chr7_2:19489733-19489752 None:intergenic 35.0%
TTCTTTGGTGAAACAGATAC+AGG - chr7_2:19489873-19489892 Msa1051840:intron 35.0%
TCTTTGGTGAAACAGATACA+GGG - chr7_2:19489874-19489893 Msa1051840:intron 35.0%
ACTTCTCTCTCTCAAAGATT+CGG + chr7_2:19489914-19489933 None:intergenic 35.0%
TAGCATAGCATAGAGAGTAA+AGG + chr7_2:19490087-19490106 None:intergenic 35.0%
CTGATGCTGCAACTTATTTA+AGG - chr7_2:19490159-19490178 Msa1051840:CDS 35.0%
TGTATTCTATTCTCCATGGA+GGG - chr7_2:19490582-19490601 Msa1051840:intron 35.0%
AATCATTTCCCATCATCGAA+AGG - chr7_2:19490632-19490651 Msa1051840:intron 35.0%
!!! ATGCTGTCATTTTACTTTCC+AGG - chr7_2:19490781-19490800 Msa1051840:intron 35.0%
!!! TGCTGTCATTTTACTTTCCA+GGG - chr7_2:19490782-19490801 Msa1051840:intron 35.0%
CTTCAACATCATGCTTAAGA+TGG - chr7_2:19490920-19490939 Msa1051840:CDS 35.0%
! AAGTAATATTGACTATGCGC+AGG + chr7_2:19490992-19491011 None:intergenic 35.0%
ATCAGAAATTGTTTCACCGT+TGG + chr7_2:19491234-19491253 None:intergenic 35.0%
TGAGTTTCTAACTTCACTGT+AGG - chr7_2:19491254-19491273 Msa1051840:intron 35.0%
AATAGTTTACCTGTGATCGA+AGG + chr7_2:19491337-19491356 None:intergenic 35.0%
ACTATGTCAACAAAATAGCC+AGG + chr7_2:19491619-19491638 None:intergenic 35.0%
GTTGACATAGTGATAGAAAC+CGG - chr7_2:19491628-19491647 Msa1051840:CDS 35.0%
TAGATAAATGGGGAATCTGA+AGG + chr7_2:19491825-19491844 None:intergenic 35.0%
TAGGAAGCAGTTATGTTTCT+AGG + chr7_2:19491870-19491889 None:intergenic 35.0%
!! TAGTTTGCTTTCTTCCTTTC+AGG - chr7_2:19491979-19491998 Msa1051840:intron 35.0%
CTATACAGAGCAAAGTGATT+TGG + chr7_2:19492192-19492211 None:intergenic 35.0%
TGCTCTGTATAGAATCTACT+TGG - chr7_2:19492200-19492219 Msa1051840:CDS 35.0%
!!! TAGGGTTTTAGGATTCAAGT+AGG - chr7_2:19492254-19492273 Msa1051840:intron 35.0%
GGATTCAAGTAGGAATTCTT+TGG - chr7_2:19492264-19492283 Msa1051840:intron 35.0%
AATATATTCTGATATGGGCG+TGG + chr7_2:19492589-19492608 None:intergenic 35.0%
CTATTAGCAGAATAGTTAGG+AGG - chr7_2:19492787-19492806 Msa1051840:intron 35.0%
TGACACTTAATATTAGGCAG+AGG - chr7_2:19492886-19492905 Msa1051840:intron 35.0%
GACACTTAATATTAGGCAGA+GGG - chr7_2:19492887-19492906 Msa1051840:intron 35.0%
AAGCCCAAAAACTTCAGAAA+TGG + chr7_2:19493102-19493121 None:intergenic 35.0%
!! TGTTTCTTTAGAGCAGATCT+GGG + chr7_2:19493488-19493507 None:intergenic 35.0%
AACAATTTACCCCTTGGTAT+TGG - chr7_2:19493543-19493562 Msa1051840:intron 35.0%
GTCTGCAAGAGTAACAAATT+TGG + chr7_2:19493637-19493656 None:intergenic 35.0%
! AATTTCAGCTGACTCAACAA+GGG + chr7_2:19493742-19493761 None:intergenic 35.0%
TGAGCAAACTCGATTTAATC+TGG - chr7_2:19493832-19493851 Msa1051840:intron 35.0%
ACATCTTCGTTACTTCAAAC+AGG - chr7_2:19494013-19494032 Msa1051840:intron 35.0%
GAATGTTGTGACAAAGACTA+TGG + chr7_2:19494066-19494085 None:intergenic 35.0%
!! AGCAAAGCTGATTTTAAACC+TGG + chr7_2:19494153-19494172 None:intergenic 35.0%
AAATGCAAATGATTCACTGC+CGG - chr7_2:19494248-19494267 Msa1051840:intron 35.0%
CTTATGTGAACTTCTACCAA+TGG + chr7_2:19494443-19494462 None:intergenic 35.0%
!! TTTTTCGTTCTTGATAGTCG+GGG - chr7_2:19494668-19494687 Msa1051840:intron 35.0%
!! ATGGTTTGCTGCATTGTTTA+CGG + chr7_2:19494709-19494728 None:intergenic 35.0%
TCTCATCATCATCATCATCA+TGG - chr7_2:19494914-19494933 Msa1051840:intron 35.0%
CTTTGATTGTTGATGTAAGC+AGG + chr7_2:19494982-19495001 None:intergenic 35.0%
AGCAAAACCTCAAATCTGAT+TGG + chr7_2:19495015-19495034 None:intergenic 35.0%
! TCTTTGTTGGTGAAATGATG+CGG + chr7_2:19495039-19495058 None:intergenic 35.0%
TGCAAAGTGTAGTTCTTTGT+TGG + chr7_2:19495052-19495071 None:intergenic 35.0%
AACAAAGAACTACACTTTGC+AGG - chr7_2:19495051-19495070 Msa1051840:intron 35.0%
! TGCACTGACAAGCATAATTA+AGG + chr7_2:19495147-19495166 None:intergenic 35.0%
TTAATTATGCTTGTCAGTGC+AGG - chr7_2:19495146-19495165 Msa1051840:intron 35.0%
TATACGAAAGTTACCCTTTC+AGG + chr7_2:19495249-19495268 None:intergenic 35.0%
TTCAAAAGAACTACTCTCAC+TGG + chr7_2:19495376-19495395 None:intergenic 35.0%
ATGTGTTGCGAAGAGTTATT+GGG - chr7_2:19495526-19495545 Msa1051840:intron 35.0%
!! TGATAAATGTGCTGATTGTG+GGG - chr7_2:19495551-19495570 Msa1051840:intron 35.0%
CTTGTTTGCATTGAATGTTC+CGG - chr7_2:19495612-19495631 Msa1051840:intron 35.0%
! ATAAAGGGTGTGCATTTGTA+TGG + chr7_2:19495677-19495696 None:intergenic 35.0%
CAGACGAGAAATAAAGAACA+GGG + chr7_2:19495852-19495871 None:intergenic 35.0%
TTAATTCCTTCCCTCTCAAT+TGG - chr7_2:19496242-19496261 Msa1051840:intron 35.0%
AATATACCAATTGAGAGGGA+AGG + chr7_2:19496251-19496270 None:intergenic 35.0%
GAAAACTGTTTGTGGCTTAT+CGG + chr7_2:19496553-19496572 None:intergenic 35.0%
!! TTGGTGATGAAAACTGTTTG+TGG + chr7_2:19496561-19496580 None:intergenic 35.0%
AGAATCATATTGACCAGGTT+TGG + chr7_2:19496580-19496599 None:intergenic 35.0%
ATATGATTCTCTAGCAGTGA+AGG - chr7_2:19496590-19496609 Msa1051840:CDS 35.0%
TGTAAAAGAATACCTTTGCC+TGG + chr7_2:19496626-19496645 None:intergenic 35.0%
CTATTGTCAGAAACAGATTG+AGG - chr7_2:19496780-19496799 Msa1051840:intron 35.0%
ATCTATTTCATGTGATGCCT+AGG + chr7_2:19496843-19496862 None:intergenic 35.0%
! GACCAAGTTGAAAACAAGAA+GGG + chr7_2:19496896-19496915 None:intergenic 35.0%
! AGACCAAGTTGAAAACAAGA+AGG + chr7_2:19496897-19496916 None:intergenic 35.0%
!!! TTCTTGTTTTCAACTTGGTC+TGG - chr7_2:19496896-19496915 Msa1051840:intron 35.0%
! TTGGTCTGGAATCAAAGTTA+TGG - chr7_2:19496910-19496929 Msa1051840:intron 35.0%
CATCCGAATTAACAATGTAG+CGG + chr7_2:19497196-19497215 None:intergenic 35.0%
GTAATAGCATTACTTTGGCA+AGG + chr7_2:19497265-19497284 None:intergenic 35.0%
! AATTTGGTGGGTACTAAAGA+AGG - chr7_2:19497359-19497378 Msa1051840:intron 35.0%
TAATATTTGCGCCATATTGC+AGG + chr7_2:19497466-19497485 None:intergenic 35.0%
!! TTGCAAGATTGCTACTTTCA+AGG - chr7_2:19497549-19497568 Msa1051840:intron 35.0%
! TCTGAAATCTGTAACTATGC+AGG - chr7_2:19498045-19498064 Msa1051840:intron 35.0%
CTGAAATCTGTAACTATGCA+GGG - chr7_2:19498046-19498065 Msa1051840:intron 35.0%
TGAAATCTGTAACTATGCAG+GGG - chr7_2:19498047-19498066 Msa1051840:intron 35.0%
TAGAATCATTTGATGGAGCA+TGG + chr7_2:19498154-19498173 None:intergenic 35.0%
GCTCCATCAAATGATTCTAA+TGG - chr7_2:19498155-19498174 Msa1051840:intron 35.0%
TGAAGAGTTAAAAAGGAGTG+TGG - chr7_2:19498315-19498334 Msa1051840:exon 35.0%
AAGATGTGATACATTAGGCT+AGG - chr7_2:19498504-19498523 Msa1051840:five_prime_UTR 35.0%
AGATGTGATACATTAGGCTA+GGG - chr7_2:19498505-19498524 Msa1051840:five_prime_UTR 35.0%
TTTGTGCATCCTATGTACAT+TGG - chr7_2:19498529-19498548 Msa1051840:five_prime_UTR 35.0%
TTACTGGATTATTACTTGGC+AGG - chr7_2:19498596-19498615 Msa1051840:five_prime_UTR 35.0%
TACTGGATTATTACTTGGCA+GGG - chr7_2:19498597-19498616 Msa1051840:five_prime_UTR 35.0%
AAGAGACAGAGAAACAACGT+TGG + chr7_2:19488004-19488023 None:intergenic 40.0%
! TCTTTTTCTCTTTCCTCGCT+AGG - chr7_2:19488026-19488045 Msa1051840:three_prime_UTR 40.0%
! CTTTTTCTCTTTCCTCGCTA+GGG - chr7_2:19488027-19488046 Msa1051840:three_prime_UTR 40.0%
AAAAAACAGAAACCCTAGCG+AGG + chr7_2:19488042-19488061 None:intergenic 40.0%
!!! CGCTAGGGTTTCTGTTTTTT+AGG - chr7_2:19488042-19488061 Msa1051840:three_prime_UTR 40.0%
TGAGTAACCAAACCTGTTTG+CGG + chr7_2:19488251-19488270 None:intergenic 40.0%
TCTGTGTTGTGTGTTGTATC+CGG - chr7_2:19488610-19488629 Msa1051840:intron 40.0%
TGATCTGCAAATGACAACAC+TGG - chr7_2:19488812-19488831 Msa1051840:intron 40.0%
GATCTGCAAATGACAACACT+GGG - chr7_2:19488813-19488832 Msa1051840:intron 40.0%
TTCAGGGTTTAATCCAGGTT+GGG + chr7_2:19489001-19489020 None:intergenic 40.0%
AACTGCTATTGTTCTCCGAT+AGG - chr7_2:19489074-19489093 Msa1051840:CDS 40.0%
!! TTCAAAGTGTTGTCAGGTAG+CGG - chr7_2:19489105-19489124 Msa1051840:CDS 40.0%
TGCAATTGTTCGACAACACA+GGG - chr7_2:19489175-19489194 Msa1051840:CDS 40.0%
CATTTCAACGAAGATGCATC+AGG + chr7_2:19489376-19489395 None:intergenic 40.0%
AACTTTACTGCATTCCTTGC+TGG - chr7_2:19489591-19489610 Msa1051840:intron 40.0%
ATCATATCGTTCTACCAGCA+AGG + chr7_2:19489608-19489627 None:intergenic 40.0%
ATCAGCATCTATGTTGAAGG+TGG + chr7_2:19489730-19489749 None:intergenic 40.0%
GATGCTTCCACAAAAGTTCA+TGG + chr7_2:19490018-19490037 None:intergenic 40.0%
TACTGAACGATGCATCTGAA+AGG + chr7_2:19490431-19490450 None:intergenic 40.0%
GTGTATTCTATTCTCCATGG+AGG - chr7_2:19490581-19490600 Msa1051840:intron 40.0%
!! GTCATTTTACTTTCCAGGGA+AGG - chr7_2:19490786-19490805 Msa1051840:intron 40.0%
TTCCCCTATAATCTTGCCAA+CGG - chr7_2:19491215-19491234 Msa1051840:intron 40.0%
TCACCGTTGGCAAGATTATA+GGG + chr7_2:19491221-19491240 None:intergenic 40.0%
TTCACCGTTGGCAAGATTAT+AGG + chr7_2:19491222-19491241 None:intergenic 40.0%
AAGAGAAATCGGGACATACA+AGG - chr7_2:19491307-19491326 Msa1051840:CDS 40.0%
ATTCGGAGTCATTGGAAACT+AGG + chr7_2:19491386-19491405 None:intergenic 40.0%
AATGCGTTATTCGGAGTCAT+TGG + chr7_2:19491394-19491413 None:intergenic 40.0%
GAAGAATAGAGAGTGATTGG+AGG + chr7_2:19491453-19491472 None:intergenic 40.0%
! ACTATTTGGAACTATCGTCC+TGG - chr7_2:19491598-19491617 Msa1051840:CDS 40.0%
GATTACACAATAGGTTCCCA+AGG - chr7_2:19491705-19491724 Msa1051840:intron 40.0%
CAAGCTCTCTAATTCTTGGA+GGG + chr7_2:19491753-19491772 None:intergenic 40.0%
AGACCAAGCTCTCTAATTCT+TGG + chr7_2:19491757-19491776 None:intergenic 40.0%
!! AGAGGCATTTCGTTTGGAAA+TGG + chr7_2:19491794-19491813 None:intergenic 40.0%
TAACATGTGCTCAACCTGAA+AGG + chr7_2:19491996-19492015 None:intergenic 40.0%
TGGAACATATACTTCCCTTG+AGG - chr7_2:19492284-19492303 Msa1051840:intron 40.0%
GACGCTTAATAAGAGACAGA+GGG + chr7_2:19492669-19492688 None:intergenic 40.0%
!! GAGAAGTATCAGACATGTGT+TGG - chr7_2:19493045-19493064 Msa1051840:intron 40.0%
AATGGATCCTTTCTTAGTGC+AGG - chr7_2:19493237-19493256 Msa1051840:CDS 40.0%
AATGCACCTGGTCATAGATA+AGG + chr7_2:19493291-19493310 None:intergenic 40.0%
!! CTGTTTCTTTAGAGCAGATC+TGG + chr7_2:19493489-19493508 None:intergenic 40.0%
ACAAAAGCCTACCTCTTCTA+GGG + chr7_2:19493713-19493732 None:intergenic 40.0%
TACAAAAGCCTACCTCTTCT+AGG + chr7_2:19493714-19493733 None:intergenic 40.0%
! GAATTTCAGCTGACTCAACA+AGG + chr7_2:19493743-19493762 None:intergenic 40.0%
!! AGTTTTTGGAAGCAGTCAGT+GGG - chr7_2:19493979-19493998 Msa1051840:intron 40.0%
!! CTGCCGGTTAATTATTTTGC+AGG - chr7_2:19494264-19494283 Msa1051840:intron 40.0%
AAGAGCTGCTTGCTCATAAT+TGG + chr7_2:19494323-19494342 None:intergenic 40.0%
GACAGATTGATCGAGAAAGT+AGG - chr7_2:19494368-19494387 Msa1051840:intron 40.0%
AGATTGATCGAGAAAGTAGG+TGG - chr7_2:19494371-19494390 Msa1051840:intron 40.0%
GATTGATCGAGAAAGTAGGT+GGG - chr7_2:19494372-19494391 Msa1051840:intron 40.0%
!! TGGGCTTCTAATGGTTCTAA+TGG - chr7_2:19494391-19494410 Msa1051840:intron 40.0%
! GGTTCTAATGGATCTCCTAA+TGG - chr7_2:19494403-19494422 Msa1051840:intron 40.0%
AATGGATCTCCTAATGGAGA+TGG - chr7_2:19494409-19494428 Msa1051840:intron 40.0%
GCTTGTATACCATCTCCATT+AGG + chr7_2:19494421-19494440 None:intergenic 40.0%
! TCTCTTTTCAACCTTTCCCT+TGG + chr7_2:19494494-19494513 None:intergenic 40.0%
TAGGTTCAGACTATTCGACA+AGG - chr7_2:19494596-19494615 Msa1051840:intron 40.0%
CAAGCGTTCGTCAAACTTAA+GGG - chr7_2:19494628-19494647 Msa1051840:intron 40.0%
AAGCGTTCGTCAAACTTAAG+GGG - chr7_2:19494629-19494648 Msa1051840:intron 40.0%
!!! TGTGGTTTTTTATCACGTGC+AGG - chr7_2:19494817-19494836 Msa1051840:intron 40.0%
!!! GTGGTTTTTTATCACGTGCA+GGG - chr7_2:19494818-19494837 Msa1051840:intron 40.0%
TTCTGGTCAGAGGAATAGTT+CGG - chr7_2:19494856-19494875 Msa1051840:intron 40.0%
CATCATCATCATCATCATGG+TGG - chr7_2:19494917-19494936 Msa1051840:intron 40.0%
ATGCTGACCAATCAGATTTG+AGG - chr7_2:19495005-19495024 Msa1051840:intron 40.0%
CCATTTCTATCAGTTGTTGC+CGG - chr7_2:19495317-19495336 Msa1051840:intron 40.0%
! ATGTTTTGTGTCTTCACACC+TGG - chr7_2:19495443-19495462 Msa1051840:intron 40.0%
! TTTTATTACAGGATCGCTGC+TGG + chr7_2:19495491-19495510 None:intergenic 40.0%
ACTCTTCGCAACACATCAAT+TGG + chr7_2:19495522-19495541 None:intergenic 40.0%
GATGTGTTGCGAAGAGTTAT+TGG - chr7_2:19495525-19495544 Msa1051840:intron 40.0%
AGATTTAGTGATGCCCAATC+TGG + chr7_2:19495585-19495604 None:intergenic 40.0%
GATTGGGCATCACTAAATCT+TGG - chr7_2:19495585-19495604 Msa1051840:intron 40.0%
GCAGACGAGAAATAAAGAAC+AGG + chr7_2:19495853-19495872 None:intergenic 40.0%
ACTCTTCTCGTGTGAAATGT+AGG - chr7_2:19496116-19496135 Msa1051840:intron 40.0%
GAGAGGGAAGGAATTAAAAC+AGG + chr7_2:19496239-19496258 None:intergenic 40.0%
CTCTCTTACATTGGACGTTA+AGG - chr7_2:19496297-19496316 Msa1051840:intron 40.0%
TTACATTGGACGTTAAGGTG+TGG - chr7_2:19496302-19496321 Msa1051840:intron 40.0%
TACATTGGACGTTAAGGTGT+GGG - chr7_2:19496303-19496322 Msa1051840:intron 40.0%
TGGGGATTATTTACCCTGTA+GGG + chr7_2:19496432-19496451 None:intergenic 40.0%
! ACAGTTTTCATCACCAAACC+TGG - chr7_2:19496564-19496583 Msa1051840:intron 40.0%
GCTAGAGAATCATATTGACC+AGG + chr7_2:19496585-19496604 None:intergenic 40.0%
AGTGAAGGAAAAGTTCATCC+AGG - chr7_2:19496605-19496624 Msa1051840:CDS 40.0%
! TGGAAAATGATGGAGAATGG+AGG - chr7_2:19496727-19496746 Msa1051840:intron 40.0%
! AAATGATGGAGAATGGAGGA+AGG - chr7_2:19496731-19496750 Msa1051840:intron 40.0%
GGATTCACACTAGAATTCCT+AGG - chr7_2:19496823-19496842 Msa1051840:intron 40.0%
!!! CACCCTTCTTGTTTTCAACT+TGG - chr7_2:19496891-19496910 Msa1051840:intron 40.0%
! GATTTTTGTTCGTAGACCGA+AGG - chr7_2:19497097-19497116 Msa1051840:intron 40.0%
! TCTGTTGTGCTACTAAGAGT+CGG + chr7_2:19497133-19497152 None:intergenic 40.0%
TCTTAGTAGCACAACAGATC+TGG - chr7_2:19497135-19497154 Msa1051840:intron 40.0%
CTTAGTAGCACAACAGATCT+GGG - chr7_2:19497136-19497155 Msa1051840:intron 40.0%
GAACAGGCAAACAATGATCA+CGG - chr7_2:19497287-19497306 Msa1051840:intron 40.0%
TGAAACTGCAGACATTGGAA+TGG - chr7_2:19497430-19497449 Msa1051840:intron 40.0%
GAAATGGTCACTCAGTCAAA+TGG + chr7_2:19497638-19497657 None:intergenic 40.0%
! ACAAAGTGTCTTGGAAGATG+AGG - chr7_2:19497822-19497841 Msa1051840:intron 40.0%
ATTCTGCAGCAAGCTCAATA+GGG + chr7_2:19498109-19498128 None:intergenic 40.0%
! GAGTTAAAAAGGAGTGTGGT+AGG - chr7_2:19498319-19498338 Msa1051840:exon 40.0%
CAAACCTGTTTGCGGAACAT+GGG + chr7_2:19488243-19488262 None:intergenic 45.0%
AGGGTGTGTGATTGATGTGT+TGG - chr7_2:19488393-19488412 Msa1051840:CDS 45.0%
! ACGCCTTCGATCAAAAGTGT+CGG + chr7_2:19488488-19488507 None:intergenic 45.0%
TGAGAAACCGTGCGAAAAGA+AGG - chr7_2:19488913-19488932 Msa1051840:intron 45.0%
! ACCACTTCCTTCTTTTCGCA+CGG + chr7_2:19488923-19488942 None:intergenic 45.0%
CTGAGATTTAGACAGGGCTT+TGG - chr7_2:19488955-19488974 Msa1051840:intron 45.0%
! AATCCAGGTTGGGGTAACTA+GGG + chr7_2:19488991-19489010 None:intergenic 45.0%
! TAATCCAGGTTGGGGTAACT+AGG + chr7_2:19488992-19489011 None:intergenic 45.0%
TCAGGGTTTAATCCAGGTTG+GGG + chr7_2:19489000-19489019 None:intergenic 45.0%
GTTCAGGGTTTAATCCAGGT+TGG + chr7_2:19489002-19489021 None:intergenic 45.0%
CCTTGTTCAGGGTTTAATCC+AGG + chr7_2:19489006-19489025 None:intergenic 45.0%
CCTGGATTAAACCCTGAACA+AGG - chr7_2:19489003-19489022 Msa1051840:CDS 45.0%
CTGCAATTGTTCGACAACAC+AGG - chr7_2:19489174-19489193 Msa1051840:CDS 45.0%
AATTGTTCGACAACACAGGG+AGG - chr7_2:19489178-19489197 Msa1051840:CDS 45.0%
TTGGTTCAGAATTGGAAGGG+TGG + chr7_2:19489228-19489247 None:intergenic 45.0%
AGATAGGCACCAAGTCAGTT+CGG - chr7_2:19489477-19489496 Msa1051840:intron 45.0%
CTAGCGTGTGATACGATTCA+CGG + chr7_2:19490385-19490404 None:intergenic 45.0%
ACTACGAAAAACACCCTCCA+TGG + chr7_2:19490598-19490617 None:intergenic 45.0%
TTACTTTCCAGGGAAGGACT+TGG - chr7_2:19490792-19490811 Msa1051840:intron 45.0%
! GCAAGTGCCCTAGAAACTTT+TGG - chr7_2:19490843-19490862 Msa1051840:intron 45.0%
! AGTGCCCTAGAAACTTTTGG+TGG - chr7_2:19490846-19490865 Msa1051840:intron 45.0%
! GTGCCCTAGAAACTTTTGGT+GGG - chr7_2:19490847-19490866 Msa1051840:intron 45.0%
! TGCCCTAGAAACTTTTGGTG+GGG - chr7_2:19490848-19490867 Msa1051840:intron 45.0%
CTACACTGATGGGGTCATTA+TGG + chr7_2:19490875-19490894 None:intergenic 45.0%
CTCCAAAAGCTACACTGATG+GGG + chr7_2:19490884-19490903 None:intergenic 45.0%
CCTCCAAAAGCTACACTGAT+GGG + chr7_2:19490885-19490904 None:intergenic 45.0%
ACCTCCAAAAGCTACACTGA+TGG + chr7_2:19490886-19490905 None:intergenic 45.0%
CACCGTTGGCAAGATTATAG+GGG + chr7_2:19491220-19491239 None:intergenic 45.0%
TCTTAACATTGAGCTCGCAC+TGG + chr7_2:19491520-19491539 None:intergenic 45.0%
CCAAGCTCTCTAATTCTTGG+AGG + chr7_2:19491754-19491773 None:intergenic 45.0%
CCTCCAAGAATTAGAGAGCT+TGG - chr7_2:19491751-19491770 Msa1051840:intron 45.0%
!! AACGTCAGAGGCATTTCGTT+TGG + chr7_2:19491800-19491819 None:intergenic 45.0%
AATCTGAAGGACAACGTCAG+AGG + chr7_2:19491812-19491831 None:intergenic 45.0%
!!! CGATGCTGCTTTTTCCTCAA+GGG + chr7_2:19492301-19492320 None:intergenic 45.0%
!!! ACGATGCTGCTTTTTCCTCA+AGG + chr7_2:19492302-19492321 None:intergenic 45.0%
ATCATGGGTGGATGTTACGT+TGG - chr7_2:19492357-19492376 Msa1051840:intron 45.0%
CTGAACTCCCAATAGCTGTT+GGG + chr7_2:19492413-19492432 None:intergenic 45.0%
ACTGAACTCCCAATAGCTGT+TGG + chr7_2:19492414-19492433 None:intergenic 45.0%
AACAGCTATTGGGAGTTCAG+TGG - chr7_2:19492413-19492432 Msa1051840:intron 45.0%
ACAGCTATTGGGAGTTCAGT+GGG - chr7_2:19492414-19492433 Msa1051840:intron 45.0%
CGACGCTTAATAAGAGACAG+AGG + chr7_2:19492670-19492689 None:intergenic 45.0%
TTTGGAGATAGGAATGCACC+TGG + chr7_2:19493303-19493322 None:intergenic 45.0%
AACTTGAAGAGTCTCTGTCC+AGG - chr7_2:19493917-19493936 Msa1051840:intron 45.0%
CATTTGAGAGAGCAGTAACC+TGG + chr7_2:19493938-19493957 None:intergenic 45.0%
!! GAGTTTTTGGAAGCAGTCAG+TGG - chr7_2:19493978-19493997 Msa1051840:intron 45.0%
GTAACGAAGATGTGCATCCA+TGG + chr7_2:19494006-19494025 None:intergenic 45.0%
AATGGAGCCGTACATTAACC+AGG - chr7_2:19494132-19494151 Msa1051840:intron 45.0%
ATGCTCAGCAATCAAGAGAG+AGG - chr7_2:19494296-19494315 Msa1051840:intron 45.0%
! GAAAGTAGGTGGGCTTCTAA+TGG - chr7_2:19494382-19494401 Msa1051840:intron 45.0%
GGAGATGGTATACAAGCCAT+TGG - chr7_2:19494424-19494443 Msa1051840:intron 45.0%
AGTAATGCAGAATGCTGCCA+AGG - chr7_2:19494474-19494493 Msa1051840:intron 45.0%
GTAATGCAGAATGCTGCCAA+GGG - chr7_2:19494475-19494494 Msa1051840:intron 45.0%
GGAAAGGTTGAAAAGAGAGC+TGG - chr7_2:19494496-19494515 Msa1051840:CDS 45.0%
CCTTAAGTTTGACGAACGCT+TGG + chr7_2:19494630-19494649 None:intergenic 45.0%
CCAAGCGTTCGTCAAACTTA+AGG - chr7_2:19494627-19494646 Msa1051840:intron 45.0%
AGCGTTCGTCAAACTTAAGG+GGG - chr7_2:19494630-19494649 Msa1051840:intron 45.0%
AATAGTTCGGAGCTTGGTTC+TGG - chr7_2:19494869-19494888 Msa1051840:intron 45.0%
! GTTCTGGACTTCTTAGTCGA+TGG - chr7_2:19494885-19494904 Msa1051840:intron 45.0%
GTTCACAGTGTGATGAGCAA+CGG + chr7_2:19494960-19494979 None:intergenic 45.0%
AATCTGAGAGCTCAGCAATG+AGG + chr7_2:19495226-19495245 None:intergenic 45.0%
TGAGCTCTCAGATTCCTGAA+AGG - chr7_2:19495232-19495251 Msa1051840:CDS 45.0%
GAGCTCTCAGATTCCTGAAA+GGG - chr7_2:19495233-19495252 Msa1051840:CDS 45.0%
CCGGCAACAACTGATAGAAA+TGG + chr7_2:19495320-19495339 None:intergenic 45.0%
TACTTTCTTCAACAGCGCAG+TGG + chr7_2:19495413-19495432 None:intergenic 45.0%
!! TCGCTGCTGGTTCAAATTTC+TGG + chr7_2:19495478-19495497 None:intergenic 45.0%
ACCAAGGTTTCGATGAACAC+CGG + chr7_2:19495634-19495653 None:intergenic 45.0%
CCTTTGATATGTGCACACCA+AGG + chr7_2:19495650-19495669 None:intergenic 45.0%
! CCTTGGTGTGCACATATCAA+AGG - chr7_2:19495647-19495666 Msa1051840:CDS 45.0%
AGAGCGAACCTACAACAGAA+TGG + chr7_2:19496281-19496300 None:intergenic 45.0%
GTAGGTTCGCTCTCTTACAT+TGG - chr7_2:19496288-19496307 Msa1051840:intron 45.0%
ATACGTTTGCCAACTCTGTC+TGG - chr7_2:19496362-19496381 Msa1051840:intron 45.0%
TACGTTTGCCAACTCTGTCT+GGG - chr7_2:19496363-19496382 Msa1051840:intron 45.0%
!! GCAATCAAGAAGTGCCTTTC+AGG - chr7_2:19496396-19496415 Msa1051840:intron 45.0%
AGGGACAAGATCAACCTGAA+AGG + chr7_2:19496413-19496432 None:intergenic 45.0%
! AGGTTGATCTTGTCCCTACA+GGG - chr7_2:19496416-19496435 Msa1051840:intron 45.0%
GTGGGGATTATTTACCCTGT+AGG + chr7_2:19496433-19496452 None:intergenic 45.0%
GGAAAAGTTCATCCAGGCAA+AGG - chr7_2:19496611-19496630 Msa1051840:CDS 45.0%
TCTTCTCTGCATACTGCCAA+GGG + chr7_2:19497079-19497098 None:intergenic 45.0%
ATCTTCTCTGCATACTGCCA+AGG + chr7_2:19497080-19497099 None:intergenic 45.0%
!! AGTCGGTACTGATTGTCCTT+CGG + chr7_2:19497116-19497135 None:intergenic 45.0%
CAATGATCACGGCCCTAATT+TGG - chr7_2:19497298-19497317 Msa1051840:intron 45.0%
ATGCGTTCCCTGCCAAATTA+GGG + chr7_2:19497313-19497332 None:intergenic 45.0%
AATGCGTTCCCTGCCAAATT+AGG + chr7_2:19497314-19497333 None:intergenic 45.0%
TAATTTGGCAGGGAACGCAT+TGG - chr7_2:19497313-19497332 Msa1051840:intron 45.0%
GCTTGTGAAACTGCAGACAT+TGG - chr7_2:19497425-19497444 Msa1051840:intron 45.0%
AACTGCAGACATTGGAATGG+TGG - chr7_2:19497433-19497452 Msa1051840:intron 45.0%
TATTTGCGCCATATTGCAGG+AGG + chr7_2:19497463-19497482 None:intergenic 45.0%
!! TGCTACTTTCAAGGTCAGTG+TGG - chr7_2:19497558-19497577 Msa1051840:intron 45.0%
GTCAAATGGCAATGTCACAG+AGG + chr7_2:19497624-19497643 None:intergenic 45.0%
AATCTGTAACTATGCAGGGG+AGG - chr7_2:19498050-19498069 Msa1051840:intron 45.0%
TTCTGCAGCAAGCTCAATAG+GGG + chr7_2:19498108-19498127 None:intergenic 45.0%
GATTCTGCAGCAAGCTCAAT+AGG + chr7_2:19498110-19498129 None:intergenic 45.0%
AGGTTGTAATGTCTGCCCTT+TGG - chr7_2:19498339-19498358 Msa1051840:five_prime_UTR 45.0%
!!! TAAATTCTTTTATAAAATAA+AGG - chr7_2:19495873-19495892 Msa1051840:intron 5.0%
TTCTCCCATGTTCCGCAAAC+AGG - chr7_2:19488236-19488255 Msa1051840:three_prime_UTR 50.0%
CCAAACCTGTTTGCGGAACA+TGG + chr7_2:19488244-19488263 None:intergenic 50.0%
CCATGTTCCGCAAACAGGTT+TGG - chr7_2:19488241-19488260 Msa1051840:three_prime_UTR 50.0%
! TCCCCGACACTTTTGATCGA+AGG - chr7_2:19488482-19488501 Msa1051840:intron 50.0%
!! GCCTTCGATCAAAAGTGTCG+GGG + chr7_2:19488486-19488505 None:intergenic 50.0%
!! CGCCTTCGATCAAAAGTGTC+GGG + chr7_2:19488487-19488506 None:intergenic 50.0%
!! CTTTTGATCGAAGGCGTGTC+TGG - chr7_2:19488491-19488510 Msa1051840:intron 50.0%
! GATAGGTGTTGTCGACGTGT+CGG - chr7_2:19488585-19488604 Msa1051840:intron 50.0%
ACCGTGCGAAAAGAAGGAAG+TGG - chr7_2:19488919-19488938 Msa1051840:intron 50.0%
GGTTGGGGTAACTAGGGTTT+GGG + chr7_2:19488985-19489004 None:intergenic 50.0%
AGGTTGGGGTAACTAGGGTT+TGG + chr7_2:19488986-19489005 None:intergenic 50.0%
AAACCCTAGTTACCCCAACC+TGG - chr7_2:19488985-19489004 Msa1051840:CDS 50.0%
GGTGAAACAGATACAGGGCA+TGG - chr7_2:19489879-19489898 Msa1051840:intron 50.0%
GAAACAGATACAGGGCATGG+AGG - chr7_2:19489882-19489901 Msa1051840:intron 50.0%
! GGACTTGGAGAGGCATATGA+TGG - chr7_2:19490807-19490826 Msa1051840:intron 50.0%
! GCCCTAGAAACTTTTGGTGG+GGG - chr7_2:19490849-19490868 Msa1051840:intron 50.0%
GCCCCCACCAAAAGTTTCTA+GGG + chr7_2:19490853-19490872 None:intergenic 50.0%
! GACCCCATCAGTGTAGCTTT+TGG - chr7_2:19490879-19490898 Msa1051840:CDS 50.0%
! CCCATCAGTGTAGCTTTTGG+AGG - chr7_2:19490882-19490901 Msa1051840:CDS 50.0%
CAAGGAAGTCCTTCGATCAC+AGG - chr7_2:19491325-19491344 Msa1051840:CDS 50.0%
CCGAGACTCTCGAATTCCTT+GGG + chr7_2:19491724-19491743 None:intergenic 50.0%
CCCAAGGAATTCGAGAGTCT+CGG - chr7_2:19491721-19491740 Msa1051840:intron 50.0%
CCAAGGAATTCGAGAGTCTC+GGG - chr7_2:19491722-19491741 Msa1051840:intron 50.0%
CAGCTATTGGGAGTTCAGTG+GGG - chr7_2:19492415-19492434 Msa1051840:intron 50.0%
TATTGGGAGTTCAGTGGGGA+GGG - chr7_2:19492419-19492438 Msa1051840:intron 50.0%
CGTGCTTCCTGCACTAAGAA+AGG + chr7_2:19493247-19493266 None:intergenic 50.0%
! AGCCAGCCTTATCTATGACC+AGG - chr7_2:19493282-19493301 Msa1051840:intron 50.0%
CACCTGGTCATAGATAAGGC+TGG + chr7_2:19493287-19493306 None:intergenic 50.0%
TGTAGCTACTGCCCTAGAAG+AGG - chr7_2:19493699-19493718 Msa1051840:intron 50.0%
GCGTTCGTCAAACTTAAGGG+GGG - chr7_2:19494631-19494650 Msa1051840:intron 50.0%
ACTTAAGGGGGGACTGGAAA+AGG - chr7_2:19494642-19494661 Msa1051840:intron 50.0%
! GGCTCTAGCAGTCAACATTC+TGG - chr7_2:19494839-19494858 Msa1051840:intron 50.0%
GCAGTCAACATTCTGGTCAG+AGG - chr7_2:19494846-19494865 Msa1051840:intron 50.0%
CAGAGGAATAGTTCGGAGCT+TGG - chr7_2:19494863-19494882 Msa1051840:intron 50.0%
TTGTTGCCGGCAAGTCCAAT+GGG - chr7_2:19495330-19495349 Msa1051840:intron 50.0%
CTGAGATGACCACTTCCCAT+TGG + chr7_2:19495348-19495367 None:intergenic 50.0%
CAATGGGAAGTGGTCATCTC+AGG - chr7_2:19495346-19495365 Msa1051840:intron 50.0%
! AATTTCTGGACGTACGCTCC+AGG + chr7_2:19495464-19495483 None:intergenic 50.0%
! TGATGCCCAATCTGGTTCAG+GGG + chr7_2:19495577-19495596 None:intergenic 50.0%
! GTGATGCCCAATCTGGTTCA+GGG + chr7_2:19495578-19495597 None:intergenic 50.0%
! AGTGATGCCCAATCTGGTTC+AGG + chr7_2:19495579-19495598 None:intergenic 50.0%
TCCGGTGTTCATCGAAACCT+TGG - chr7_2:19495630-19495649 Msa1051840:intron 50.0%
AAGTTCCTCCCAGACAGAGT+TGG + chr7_2:19496374-19496393 None:intergenic 50.0%
!! CAGGTTGATCTTGTCCCTAC+AGG - chr7_2:19496415-19496434 Msa1051840:intron 50.0%
AGTAGCACAACAGATCTGGG+AGG - chr7_2:19497139-19497158 Msa1051840:intron 50.0%
ATCACGGCCCTAATTTGGCA+GGG - chr7_2:19497303-19497322 Msa1051840:intron 50.0%
TACTAAAGAAGGCCAGCCGA+TGG - chr7_2:19497370-19497389 Msa1051840:intron 50.0%
AGCCGATGGTCAATCTCGAA+GGG - chr7_2:19497384-19497403 Msa1051840:intron 50.0%
CACCCTTCGAGATTGACCAT+CGG + chr7_2:19497389-19497408 None:intergenic 50.0%
! TTGGTCTGAGTCAAGAGCAC+TGG - chr7_2:19498410-19498429 Msa1051840:five_prime_UTR 50.0%
TTCCAGGGAAGGACTTGGAG+AGG - chr7_2:19490797-19490816 Msa1051840:intron 55.0%
GGCCCCCACCAAAAGTTTCT+AGG + chr7_2:19490854-19490873 None:intergenic 55.0%
CCCGAGACTCTCGAATTCCT+TGG + chr7_2:19491725-19491744 None:intergenic 55.0%
CTATTGGGAGTTCAGTGGGG+AGG - chr7_2:19492418-19492437 Msa1051840:intron 55.0%
!! AGGGAAGTGCTTTGGCAAGG+AGG - chr7_2:19492438-19492457 Msa1051840:intron 55.0%
!! GGGAAGTGCTTTGGCAAGGA+GGG - chr7_2:19492439-19492458 Msa1051840:intron 55.0%
GCTACTGCCCTAGAAGAGGT+AGG - chr7_2:19493703-19493722 Msa1051840:intron 55.0%
GCAGAATGCTGCCAAGGGAA+AGG - chr7_2:19494480-19494499 Msa1051840:CDS 55.0%
CGTCAAACTTAAGGGGGGAC+TGG - chr7_2:19494636-19494655 Msa1051840:intron 55.0%
! AGAGAGTGCGCTGGACCAAA+TGG - chr7_2:19495170-19495189 Msa1051840:intron 55.0%
GTGCGCTGGACCAAATGGAT+TGG - chr7_2:19495175-19495194 Msa1051840:intron 55.0%
GTTGTTGCCGGCAAGTCCAA+TGG - chr7_2:19495329-19495348 Msa1051840:intron 55.0%
CCACTTCCCATTGGACTTGC+CGG + chr7_2:19495339-19495358 None:intergenic 55.0%
GTTTGCCAACTCTGTCTGGG+AGG - chr7_2:19496366-19496385 Msa1051840:intron 55.0%
GATCACGGCCCTAATTTGGC+AGG - chr7_2:19497302-19497321 Msa1051840:intron 55.0%
CTTCGAGATTGACCATCGGC+TGG + chr7_2:19497385-19497404 None:intergenic 55.0%
CAGCCGATGGTCAATCTCGA+AGG - chr7_2:19497383-19497402 Msa1051840:intron 55.0%
GTGGAGCTCCTCCTGCAATA+TGG - chr7_2:19497452-19497471 Msa1051840:intron 55.0%
TGCCTCTCCAAGTCCTTCCC+TGG + chr7_2:19490802-19490821 None:intergenic 60.0%
!! CAGTGGGGAGGGAAGTGCTT+TGG - chr7_2:19492430-19492449 Msa1051840:intron 60.0%
!! GGGAGGGAAGTGCTTTGGCA+AGG - chr7_2:19492435-19492454 Msa1051840:intron 60.0%
GGAAGCAGTCAGTGGGACCA+TGG - chr7_2:19493986-19494005 Msa1051840:intron 60.0%
CCGGCAAGTCCAATGGGAAG+TGG - chr7_2:19495336-19495355 Msa1051840:intron 60.0%
TGGGGCCCCTGAACCAGATT+GGG - chr7_2:19495569-19495588 Msa1051840:intron 60.0%
TGGCAGGGAACGCATTGGAC+TGG - chr7_2:19497318-19497337 Msa1051840:intron 60.0%
CGATCCTCGAGCTGTGGATG+AGG - chr7_2:19498073-19498092 Msa1051840:intron 60.0%
CCATCCTCATCCACAGCTCG+AGG + chr7_2:19498080-19498099 None:intergenic 60.0%
CCTCGAGCTGTGGATGAGGA+TGG - chr7_2:19498077-19498096 Msa1051840:intron 60.0%
! AGTGCAGGCAGAGAGTGCGC+TGG - chr7_2:19495161-19495180 Msa1051840:intron 65.0%
GTGGGGCCCCTGAACCAGAT+TGG - chr7_2:19495568-19495587 Msa1051840:intron 65.0%
GGGAGGCGATCCTCGAGCTG+TGG - chr7_2:19498067-19498086 Msa1051840:intron 70.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 19487919 19498620 19487919 ID=Msa1051840;Name=Msa1051840
chr7_2 mRNA 19487919 19498620 19487919 ID=Msa1051840-mRNA-1;Parent=Msa1051840;Name=Msa1051840-mRNA-1;_AED=0.12;_eAED=0.12;_QI=294|1|1|1|1|1|19|439|833
chr7_2 exon 19487919 19488472 19487919 ID=Msa1051840-mRNA-1:exon:4320;Parent=Msa1051840-mRNA-1
chr7_2 exon 19488969 19489453 19488969 ID=Msa1051840-mRNA-1:exon:4319;Parent=Msa1051840-mRNA-1
chr7_2 exon 19489907 19490000 19489907 ID=Msa1051840-mRNA-1:exon:4318;Parent=Msa1051840-mRNA-1
chr7_2 exon 19490102 19490247 19490102 ID=Msa1051840-mRNA-1:exon:4317;Parent=Msa1051840-mRNA-1
chr7_2 exon 19490871 19491209 19490871 ID=Msa1051840-mRNA-1:exon:4316;Parent=Msa1051840-mRNA-1
chr7_2 exon 19491285 19491371 19491285 ID=Msa1051840-mRNA-1:exon:4315;Parent=Msa1051840-mRNA-1
chr7_2 exon 19491467 19491700 19491467 ID=Msa1051840-mRNA-1:exon:4314;Parent=Msa1051840-mRNA-1
chr7_2 exon 19491809 19491940 19491809 ID=Msa1051840-mRNA-1:exon:4313;Parent=Msa1051840-mRNA-1
chr7_2 exon 19492038 19492253 19492038 ID=Msa1051840-mRNA-1:exon:4312;Parent=Msa1051840-mRNA-1
chr7_2 exon 19492386 19492427 19492386 ID=Msa1051840-mRNA-1:exon:4311;Parent=Msa1051840-mRNA-1
chr7_2 exon 19492505 19492600 19492505 ID=Msa1051840-mRNA-1:exon:4310;Parent=Msa1051840-mRNA-1
chr7_2 exon 19492686 19492733 19492686 ID=Msa1051840-mRNA-1:exon:4309;Parent=Msa1051840-mRNA-1
chr7_2 exon 19492819 19492884 19492819 ID=Msa1051840-mRNA-1:exon:4308;Parent=Msa1051840-mRNA-1
chr7_2 exon 19493236 19493280 19493236 ID=Msa1051840-mRNA-1:exon:4307;Parent=Msa1051840-mRNA-1
chr7_2 exon 19494476 19494538 19494476 ID=Msa1051840-mRNA-1:exon:4306;Parent=Msa1051840-mRNA-1
chr7_2 exon 19495193 19495263 19495193 ID=Msa1051840-mRNA-1:exon:4305;Parent=Msa1051840-mRNA-1
chr7_2 exon 19495636 19495736 19495636 ID=Msa1051840-mRNA-1:exon:4304;Parent=Msa1051840-mRNA-1
chr7_2 exon 19496574 19496650 19496574 ID=Msa1051840-mRNA-1:exon:4303;Parent=Msa1051840-mRNA-1
chr7_2 exon 19498282 19498620 19498282 ID=Msa1051840-mRNA-1:exon:4302;Parent=Msa1051840-mRNA-1
chr7_2 five_prime_UTR 19498327 19498620 19498327 ID=Msa1051840-mRNA-1:five_prime_utr;Parent=Msa1051840-mRNA-1
chr7_2 CDS 19498282 19498326 19498282 ID=Msa1051840-mRNA-1:cds;Parent=Msa1051840-mRNA-1
chr7_2 CDS 19496574 19496650 19496574 ID=Msa1051840-mRNA-1:cds;Parent=Msa1051840-mRNA-1
chr7_2 CDS 19495636 19495736 19495636 ID=Msa1051840-mRNA-1:cds;Parent=Msa1051840-mRNA-1
chr7_2 CDS 19495193 19495263 19495193 ID=Msa1051840-mRNA-1:cds;Parent=Msa1051840-mRNA-1
chr7_2 CDS 19494476 19494538 19494476 ID=Msa1051840-mRNA-1:cds;Parent=Msa1051840-mRNA-1
chr7_2 CDS 19493236 19493280 19493236 ID=Msa1051840-mRNA-1:cds;Parent=Msa1051840-mRNA-1
chr7_2 CDS 19492819 19492884 19492819 ID=Msa1051840-mRNA-1:cds;Parent=Msa1051840-mRNA-1
chr7_2 CDS 19492686 19492733 19492686 ID=Msa1051840-mRNA-1:cds;Parent=Msa1051840-mRNA-1
chr7_2 CDS 19492505 19492600 19492505 ID=Msa1051840-mRNA-1:cds;Parent=Msa1051840-mRNA-1
chr7_2 CDS 19492386 19492427 19492386 ID=Msa1051840-mRNA-1:cds;Parent=Msa1051840-mRNA-1
chr7_2 CDS 19492038 19492253 19492038 ID=Msa1051840-mRNA-1:cds;Parent=Msa1051840-mRNA-1
chr7_2 CDS 19491809 19491940 19491809 ID=Msa1051840-mRNA-1:cds;Parent=Msa1051840-mRNA-1
chr7_2 CDS 19491467 19491700 19491467 ID=Msa1051840-mRNA-1:cds;Parent=Msa1051840-mRNA-1
chr7_2 CDS 19491285 19491371 19491285 ID=Msa1051840-mRNA-1:cds;Parent=Msa1051840-mRNA-1
chr7_2 CDS 19490871 19491209 19490871 ID=Msa1051840-mRNA-1:cds;Parent=Msa1051840-mRNA-1
chr7_2 CDS 19490102 19490247 19490102 ID=Msa1051840-mRNA-1:cds;Parent=Msa1051840-mRNA-1
chr7_2 CDS 19489907 19490000 19489907 ID=Msa1051840-mRNA-1:cds;Parent=Msa1051840-mRNA-1
chr7_2 CDS 19488969 19489453 19488969 ID=Msa1051840-mRNA-1:cds;Parent=Msa1051840-mRNA-1
chr7_2 CDS 19488358 19488472 19488358 ID=Msa1051840-mRNA-1:cds;Parent=Msa1051840-mRNA-1
chr7_2 three_prime_UTR 19487919 19488357 19487919 ID=Msa1051840-mRNA-1:three_prime_utr;Parent=Msa1051840-mRNA-1
Gene Sequence

>Msa1051840

ATGCAATTCGCTAAGCTTGATGATTCTCCCATGTTCCGCAAACAGATACAGGGCATGGAGGAAAGTGCCGAATCTTTGAGAGAGAGAAGTTTGAAATTTTACAAGGGATGCAGAAAATACACGGAAGGACTTGGAGAGGCATATGATGGAGACATTGCATTTGCAAGTGCCCTAGAAACTTTTGGTGGGGGCCATAATGACCCCATCAGTGTAGCTTTTGGAGGCCCTGTTATGACCAAATTCACTATAGCATTAAGAGAAATCGGGACATACAAGGAAGTCCTTCGATCACAGGTTGAGCACATGTTAAATGACAGATTGCTCCAGTTTGTCAATATTGATTTGCAAGAAGTCAAGGAAGCACGAAAACGCTTTGACAAAGCCAGCCTTATCTATGACCAGACTCGTGAAAAGTTTCTTTCACTGAGAAAAGGTACAAAAAGTGATGTAGCTACTGCCCTAGAAGAGGAGCTTCATAGTGCAAGAACTACATTTGAGCAAACTCGATTTAATCTGGTTACTGCTCTCTCAAATGTTGAAGCAAAGAAGAGATTTGAGTTTTTGGAAGCAGTCAGTGGGACCATGGATGCACATCTTCGTTACTTCAAACAGGGGTATGAACTATTACATCAAATGGAGCCGTACATTAACCAGGTCTTGACTTATGCTCAGCAATCAAGAGAGAGGTCCAATTATGAGCAAGCAGCTCTTAATGAAAGAATGCAAGATTACAAACGACAGATTGATCGAGAAAGTAGGTGGGCTTCTAATGGTTCTAATGGATCTCCTAATGGAGATGGTATACAAGCCATTGGTAGAAGTTCACATAAGATGATAGAAGCAGTAATGCAGAATGCTGCCAAGGGAAAGGTTCAGACTATTCGACAAGGTTATCTCTCCAAGCGTTCGTCAAACTTAAGGGGGGACTGGAAAAGGAGATTTTTCGTTCTTGATAGTCGGGGAATGCTGTATTACTACCGTAAACAATGCAGCAAACCATCTGGCTCTAGCAGTCAACATTCTGGTCAGAGGAATAGTTCGGAGCTTGGTTCTGGACTTCTTAGTCGATGGCTGTCTTCTCATCATCATCATCATCATGGTGGAGTACATGATGAGAAATCCGTTGCTCATCACACTGTGAACCTGCTTACATCAACAATCAAAGTTGATGCTGACCAATCAGATTTGAGGTTTTGCTTCCGCATCATTTCACCAACAAAGAACTACACTTTGCAGGCAGAGAGTGCGCTGGACCAAATGGATTGGATTGAAAAAATCACAGGTGTTATTGCCTCATTGCTGAGCTCTCAGATTCCTGAAAGGTTGTTGCCGGCAAGTCCAATGGGAAGTGGTCATCTCAGGTCTACCAGTGAGAGTAGTTCTTTTGAAAGTTCAGATTTTGACCACTGCGCTGTTGAAGAAAGTACAGCTGATAGATGTTTTGTGTCTTCACACCTGGAGCGTACGTCCAGAAATTTGAACCAGCAGCGATCCTGTAATAAAAGTGAAAAACCAATTGATGTGTTGCGAAGAGTTATTGGGAATGATAAATGTGCTGATTGTGGGGCCCCTGAACCAGATTGGGCATCACTAAATCTTGGCGTTCTTGTTTGCATTGAATGTTCCGGTGTTCATCGAAACCTTGGTGTGCACATATCAAAGGTTCGCTCTCTTACATTGGACGTTAAGGTGTGGGAACCTTCTGTGATAACTTTATTTCAGTCTCTTGGGAATACGTTTGCCAACTCTGTCTGGGAGGAACTTTTGCAATCAAGAAGTGCCTTTCAGGTTGATCTTGTCCCTACAGGCTCGAGCAAGTCCGATAAGCCACAAACAGTTTTCATCACCAAACCTGGTCAATATGATTCTCTAGCAGTGAAGGAAAAGTTCATCCAGGCAAAGTATGCAGAGAAGATTTTTGTTCGTAGACCGAAGGACAATCAGTACCGACTCTTAGTAGCACAACAGATCTGGGAGGCTGTTCGTGCTAATGACAAGAAAGCCGTATACCGCTACATTGTTAATTCGGATGTTGATGTCAACGTTGTTTATGAGCAAGCATGCAACAACTCTTTAACCCTTGCCAAAGTAATGCTATTACAAGAACAGGCAAACAATGATCACGGCCCTAATTTGGCAGGGAACGCATTGGACTGGTCTTCTAATTGCTCTATGAATTTGGTGGGTACTAAAGAAGGCCAGCCGATGGTCAATCTCGAAGGGTGCACACTACTTCACATTGCTTGTGAAACTGCAGACATTGGAATGGTGGAGCTCCTCCTGCAATATGGCGCAAATATTAATGCAACTGATTTGAGAGGTCGAACTCCTTTACATCGTTGTATTCTCAAAGGAAGATCTATAATTGCAAGATTGCTACTTTCAAGGGGAGGCGATCCTCGAGCTGTGGATGAGGATGGAAGAACCCCTATTGAGCTTGCTGCAGAATCAAATGCTGATGACAGAGTAGTCCATGCTCCATCAAATGATTCTAATGGATGA
Protein sequence

>Msa1051840

MQFAKLDDSPMFRKQIQGMEESAESLRERSLKFYKGCRKYTEGLGEAYDGDIAFASALETFGGGHNDPISVAFGGPVMTKFTIALREIGTYKEVLRSQVEHMLNDRLLQFVNIDLQEVKEARKRFDKASLIYDQTREKFLSLRKGTKSDVATALEEELHSARTTFEQTRFNLVTALSNVEAKKRFEFLEAVSGTMDAHLRYFKQGYELLHQMEPYINQVLTYAQQSRERSNYEQAALNERMQDYKRQIDRESRWASNGSNGSPNGDGIQAIGRSSHKMIEAVMQNAAKGKVQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKPSGSSSQHSGQRNSSELGSGLLSRWLSSHHHHHHGGVHDEKSVAHHTVNLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIASLLSSQIPERLLPASPMGSGHLRSTSESSSFESSDFDHCAVEESTADRCFVSSHLERTSRNLNQQRSCNKSEKPIDVLRRVIGNDKCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVITLFQSLGNTFANSVWEELLQSRSAFQVDLVPTGSSKSDKPQTVFITKPGQYDSLAVKEKFIQAKYAEKIFVRRPKDNQYRLLVAQQIWEAVRANDKKAVYRYIVNSDVDVNVVYEQACNNSLTLAKVMLLQEQANNDHGPNLAGNALDWSSNCSMNLVGTKEGQPMVNLEGCTLLHIACETADIGMVELLLQYGANINATDLRGRTPLHRCILKGRSIIARLLLSRGGDPRAVDEDGRTPIELAAESNADDRVVHAPSNDSNG*