Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1021190 | XP_003622924.1 | 93.720 | 207 | 13 | 0 | 1 | 207 | 1 | 207 | 8.73e-143 | 406 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1021190 | sp|Q9FKB5|KRP3_ARATH | 49.351 | 231 | 85 | 11 | 1 | 208 | 1 | 222 | 1.91e-51 | 168 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1021190 | G7L186 | 93.720 | 207 | 13 | 0 | 1 | 207 | 1 | 207 | 4.17e-143 | 406 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0212750 | Msa1021190 | 0.820687 | 6.011922e-53 | -8.615850e-47 |
| Msa0465920 | Msa1021190 | -0.812963 | 3.253862e-51 | -8.615850e-47 |
| Msa0465960 | Msa1021190 | -0.803511 | 3.367233e-49 | -8.615850e-47 |
| Msa0295000 | Msa1021190 | 0.801843 | 7.435189e-49 | -8.615850e-47 |
| Msa0521310 | Msa1021190 | -0.814549 | 1.456121e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1021190 | MtrunA17_Chr7g0237211 | 93.720 | 207 | 13 | 0 | 1 | 207 | 1 | 207 | 8.03e-147 | 406 |
| Msa1021190 | MtrunA17_Chr7g0237171 | 93.269 | 208 | 13 | 1 | 1 | 207 | 41 | 248 | 3.42e-143 | 399 |
| Msa1021190 | MtrunA17_Chr1g0185961 | 35.470 | 234 | 113 | 8 | 1 | 208 | 1 | 222 | 3.49e-27 | 103 |
| Msa1021190 | MtrunA17_Chr5g0402391 | 30.729 | 192 | 112 | 5 | 25 | 208 | 5 | 183 | 4.11e-18 | 78.6 |
| Msa1021190 | MtrunA17_Chr8g0374981 | 53.191 | 47 | 22 | 0 | 160 | 206 | 127 | 173 | 1.02e-11 | 61.2 |
| Msa1021190 | MtrunA17_Chr4g0045111 | 63.158 | 38 | 14 | 0 | 167 | 204 | 113 | 150 | 1.09e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1021190 | AT5G48820.1 | 49.351 | 231 | 85 | 11 | 1 | 208 | 1 | 222 | 1.94e-52 | 168 |
| Msa1021190 | AT5G48820.2 | 45.968 | 248 | 86 | 11 | 1 | 208 | 1 | 240 | 7.94e-50 | 162 |
| Msa1021190 | AT3G24810.1 | 37.168 | 226 | 87 | 8 | 1 | 208 | 1 | 189 | 1.32e-30 | 111 |
| Msa1021190 | AT2G32710.2 | 37.895 | 190 | 86 | 5 | 47 | 206 | 97 | 284 | 1.17e-29 | 111 |
| Msa1021190 | AT2G32710.1 | 37.306 | 193 | 86 | 5 | 47 | 206 | 97 | 287 | 2.13e-29 | 110 |
| Msa1021190 | AT1G49620.3 | 56.522 | 46 | 20 | 0 | 163 | 208 | 155 | 200 | 5.75e-14 | 68.2 |
| Msa1021190 | AT1G49620.1 | 56.522 | 46 | 20 | 0 | 163 | 208 | 150 | 195 | 5.80e-14 | 67.8 |
Find 97 sgRNAs with CRISPR-Local
Find 280 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTGATTCGGCGGAGATTTC+TGG | 0.134094 | 7_1:+45358451 | None:intergenic |
| GCAGCAACAAGCATTATTTA+TGG | 0.177822 | 7_1:-45355389 | Msa1021190:CDS |
| TGATTGTTCGGTTGAGAAAT+TGG | 0.204456 | 7_1:-45358322 | Msa1021190:CDS |
| GGCGACGTCACCGGCGATTT+TGG | 0.210171 | 7_1:+45358545 | None:intergenic |
| ATCACGAAGCCTGGAATTTC+CGG | 0.224389 | 7_1:+45358341 | None:intergenic |
| AATGAAAATGGTGATGATTT+TGG | 0.243548 | 7_1:-45358276 | Msa1021190:CDS |
| TTTAGTTAAATGTAAGGGTT+AGG | 0.311287 | 7_1:-45354987 | Msa1021190:three_prime_UTR |
| CTTTGTCTTGTGGTTGAACC+AGG | 0.312665 | 7_1:+45355496 | None:intergenic |
| TTTGGTGTTGAAGGTTCTTT+TGG | 0.317376 | 7_1:-45358258 | Msa1021190:CDS |
| TAAGGGTTAGGGAGGGTATA+TGG | 0.318355 | 7_1:-45354975 | Msa1021190:three_prime_UTR |
| GCACACCTTGTAGTTTAATC+AGG | 0.331031 | 7_1:-45355540 | Msa1021190:CDS |
| GCGGTTCTCCCGGAAATTCC+AGG | 0.348460 | 7_1:-45358350 | Msa1021190:CDS |
| GGAGTCGGCGGCTGCGGAGC+TGG | 0.355687 | 7_1:+45358409 | None:intergenic |
| AACTTGACAGATAAATTTCC+AGG | 0.377713 | 7_1:+45354874 | None:intergenic |
| TTTAGATTTAGTTAAATGTA+AGG | 0.380309 | 7_1:-45354993 | Msa1021190:three_prime_UTR |
| AGATCATCTTGTTCAGCATA+AGG | 0.381806 | 7_1:-45355073 | Msa1021190:three_prime_UTR |
| TTCCAGGCTTCGTGATTGTT+CGG | 0.392484 | 7_1:-45358334 | Msa1021190:CDS |
| TTTCTGGAGAGCGAGGGTTT+TGG | 0.400343 | 7_1:+45358467 | None:intergenic |
| ATGATCTCAAGCGATCTAAA+TGG | 0.402725 | 7_1:+45355089 | None:intergenic |
| CCTTACGGAGTCGGCGGCTG+CGG | 0.403609 | 7_1:+45358403 | None:intergenic |
| GCTGAAGAGGAAAATGAAAA+TGG | 0.410589 | 7_1:-45358288 | Msa1021190:CDS |
| GAAAATTTCGCAGAGATTGA+TGG | 0.418505 | 7_1:-45358234 | Msa1021190:CDS |
| TATTCCAACAGCTTATGAAA+TGG | 0.420260 | 7_1:-45355437 | Msa1021190:CDS |
| GGCTGGTCCTAGGGAAGTAC+AGG | 0.433584 | 7_1:+45355173 | None:intergenic |
| TTAGTTAAATGTAAGGGTTA+GGG | 0.437248 | 7_1:-45354986 | Msa1021190:three_prime_UTR |
| AAATCCAAATGGCTGGTCCT+AGG | 0.439736 | 7_1:+45355163 | None:intergenic |
| GATCATCTTGTTCAGCATAA+GGG | 0.440436 | 7_1:-45355072 | Msa1021190:three_prime_UTR |
| GATTGTTCGGTTGAGAAATT+GGG | 0.443081 | 7_1:-45358321 | Msa1021190:CDS |
| AATGAGAAGAGAAGAGAAGC+GGG | 0.448171 | 7_1:+45358594 | None:intergenic |
| TCACGAAGCCTGGAATTTCC+GGG | 0.452629 | 7_1:+45358342 | None:intergenic |
| GGAGGGTGATTCCATGATTA+CGG | 0.459850 | 7_1:+45358521 | None:intergenic |
| CAGAGATTGATGGTAGAGAT+AGG | 0.461294 | 7_1:-45358224 | Msa1021190:intron |
| AACCGAACAATCACGAAGCC+TGG | 0.467136 | 7_1:+45358332 | None:intergenic |
| TGACGTCGCCGCCGTAATCA+TGG | 0.469002 | 7_1:-45358532 | Msa1021190:CDS |
| CTCTCCCAGGACGGTACGAA+TGG | 0.482063 | 7_1:-45355199 | Msa1021190:CDS |
| GTAGGGAATAACAGTTATCC+TGG | 0.483036 | 7_1:-45354892 | Msa1021190:three_prime_UTR |
| AATGGATGAGTTCTTTGCTT+TGG | 0.488327 | 7_1:-45355419 | Msa1021190:CDS |
| GGGACCCATTCGTACCGTCC+TGG | 0.492050 | 7_1:+45355194 | None:intergenic |
| TTGTCTTGTGGTTGAACCAG+GGG | 0.501803 | 7_1:+45355498 | None:intergenic |
| TCATCCATTTCATAAGCTGT+TGG | 0.501940 | 7_1:+45355433 | None:intergenic |
| ACCGACGGCGGTGGAGTGGG+AGG | 0.503731 | 7_1:+45358503 | None:intergenic |
| CCGCAGCCGCCGACTCCGTA+AGG | 0.505084 | 7_1:-45358403 | Msa1021190:CDS |
| GAAGAGGAATCAGAGTGATT+CGG | 0.505537 | 7_1:+45358438 | None:intergenic |
| TCAAGTGTCATTCATACCCC+TGG | 0.505727 | 7_1:-45355514 | Msa1021190:CDS |
| CTTGTTCAGCATAAGGGAAA+GGG | 0.506461 | 7_1:-45355066 | Msa1021190:three_prime_UTR |
| CACACCTTGTAGTTTAATCA+GGG | 0.509444 | 7_1:-45355539 | Msa1021190:CDS |
| AGCTCTGCTTGAAATCCAAA+TGG | 0.511097 | 7_1:+45355152 | None:intergenic |
| TTGTGTTGATAAATTTCGTA+GGG | 0.518388 | 7_1:-45354909 | Msa1021190:three_prime_UTR |
| CTCTCCTTGCGAGGTGAAAG+CGG | 0.521153 | 7_1:+45358372 | None:intergenic |
| AATCCAAATGGCTGGTCCTA+GGG | 0.521677 | 7_1:+45355164 | None:intergenic |
| TGTTCGAACACCGACGGCGG+TGG | 0.524710 | 7_1:+45358494 | None:intergenic |
| TTGCGAGGTGAAAGCGGTGG+AGG | 0.526886 | 7_1:+45358378 | None:intergenic |
| CTGCTTGAAATCCAAATGGC+TGG | 0.531079 | 7_1:+45355156 | None:intergenic |
| GTTAAATGTAAGGGTTAGGG+AGG | 0.531530 | 7_1:-45354983 | Msa1021190:three_prime_UTR |
| TCTTGTTCAGCATAAGGGAA+AGG | 0.534519 | 7_1:-45355067 | Msa1021190:three_prime_UTR |
| GGGAAATTTCTGTGCTGAAG+AGG | 0.537643 | 7_1:-45358301 | Msa1021190:CDS |
| TCTCCCAGGACGGTACGAAT+GGG | 0.547026 | 7_1:-45355198 | Msa1021190:CDS |
| TTTGTCTTGTGGTTGAACCA+GGG | 0.547862 | 7_1:+45355497 | None:intergenic |
| GCGGAGCTGGAGGAAGGAAG+AGG | 0.550605 | 7_1:+45358422 | None:intergenic |
| GCGGCTGCGGAGCTGGAGGA+AGG | 0.551837 | 7_1:+45358416 | None:intergenic |
| TTAGATTTAGTTAAATGTAA+GGG | 0.553303 | 7_1:-45354992 | Msa1021190:three_prime_UTR |
| AAAGCGGTGGAGGAACCTTA+CGG | 0.553818 | 7_1:+45358388 | None:intergenic |
| GGACCCATTCGTACCGTCCT+GGG | 0.554313 | 7_1:+45355195 | None:intergenic |
| CTTGTGTTGATAAATTTCGT+AGG | 0.556317 | 7_1:-45354910 | Msa1021190:three_prime_UTR |
| GGCACGTGTTCGAACACCGA+CGG | 0.557782 | 7_1:+45358488 | None:intergenic |
| GATTACGGCGGCGACGTCAC+CGG | 0.558777 | 7_1:+45358536 | None:intergenic |
| CATTCGTACCGTCCTGGGAG+AGG | 0.559954 | 7_1:+45355200 | None:intergenic |
| AACACCGACGGCGGTGGAGT+GGG | 0.561575 | 7_1:+45358500 | None:intergenic |
| ATGGGTCCCTGTACTTCCCT+AGG | 0.571550 | 7_1:-45355180 | Msa1021190:exon |
| GCGGAGATTTCTGGAGAGCG+AGG | 0.572842 | 7_1:+45358460 | None:intergenic |
| CCCTCCCACTCCACCGCCGT+CGG | 0.574308 | 7_1:-45358504 | Msa1021190:CDS |
| TCCACCGCTTTCACCTCGCA+AGG | 0.574471 | 7_1:-45358376 | Msa1021190:CDS |
| GTCGGCGGCTGCGGAGCTGG+AGG | 0.575284 | 7_1:+45358412 | None:intergenic |
| GTGGAGGAACCTTACGGAGT+CGG | 0.578988 | 7_1:+45358394 | None:intergenic |
| GAACACCGACGGCGGTGGAG+TGG | 0.580653 | 7_1:+45358499 | None:intergenic |
| CGGAGATTTCTGGAGAGCGA+GGG | 0.585029 | 7_1:+45358461 | None:intergenic |
| TGTTGTTAACAGAAGCACTA+GGG | 0.587116 | 7_1:-45355566 | Msa1021190:intron |
| ATGAAGAAATCCAAAATCGC+CGG | 0.595256 | 7_1:-45358555 | Msa1021190:CDS |
| GGAGAACCGCTCTCCTTGCG+AGG | 0.597376 | 7_1:+45358363 | None:intergenic |
| CTACGAAATTTATCAACACA+AGG | 0.597663 | 7_1:+45354911 | None:intergenic |
| GTGAATGATGTACCTCTCCC+AGG | 0.597885 | 7_1:-45355212 | Msa1021190:CDS |
| GCATGTGTTCTTGAATTATG+CGG | 0.598050 | 7_1:+45355467 | None:intergenic |
| AAATGAGAAGAGAAGAGAAG+CGG | 0.600531 | 7_1:+45358593 | None:intergenic |
| GCGGTTCGTCCTTTGTCTTG+TGG | 0.600657 | 7_1:+45355486 | None:intergenic |
| TTGTTGTTAACAGAAGCACT+AGG | 0.602762 | 7_1:-45355567 | Msa1021190:intron |
| CCGACGGCGGTGGAGTGGGA+GGG | 0.610357 | 7_1:+45358504 | None:intergenic |
| CTTTCACCTCGCAAGGAGAG+CGG | 0.616503 | 7_1:-45358369 | Msa1021190:CDS |
| GAGGAACCTTACGGAGTCGG+CGG | 0.642832 | 7_1:+45358397 | None:intergenic |
| CTGGTTCAACCACAAGACAA+AGG | 0.647709 | 7_1:-45355495 | Msa1021190:CDS |
| TCCTTGCGAGGTGAAAGCGG+TGG | 0.647808 | 7_1:+45358375 | None:intergenic |
| GAGGAATCAGAGTGATTCGG+CGG | 0.652108 | 7_1:+45358441 | None:intergenic |
| GAATCCCTGATTAAACTACA+AGG | 0.654583 | 7_1:+45355535 | None:intergenic |
| TTAAATGTAAGGGTTAGGGA+GGG | 0.660966 | 7_1:-45354982 | Msa1021190:three_prime_UTR |
| ACGTGTTCGAACACCGACGG+CGG | 0.686533 | 7_1:+45358491 | None:intergenic |
| ATGATGTACCTCTCCCAGGA+CGG | 0.697717 | 7_1:-45355208 | Msa1021190:CDS |
| GCTGGTCCTAGGGAAGTACA+GGG | 0.716168 | 7_1:+45355174 | None:intergenic |
| GGGTGATTCCATGATTACGG+CGG | 0.754862 | 7_1:+45358524 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAAAAAATTGGTTTTTAA+TGG | + | chr7_1:45355640-45355659 | None:intergenic | 10.0% |
| !!! | TTAAAAACCAATTTTTTAAA+TGG | - | chr7_1:45355640-45355659 | Msa1021190:intron | 10.0% |
| !!! | TAAAAAAACAATTTTTTACA+TGG | - | chr7_1:45355674-45355693 | Msa1021190:intron | 10.0% |
| !!! | ATTATTTTTTTTTTATTGTG+TGG | - | chr7_1:45355868-45355887 | Msa1021190:intron | 10.0% |
| !! | CAAAAAAATTACTATTAAAA+TGG | + | chr7_1:45357875-45357894 | None:intergenic | 10.0% |
| !!! | ATAAGAATTTTTCAAATAAG+AGG | - | chr7_1:45355515-45355534 | Msa1021190:CDS | 15.0% |
| !!! | TAAGAATTTTTCAAATAAGA+GGG | - | chr7_1:45355516-45355535 | Msa1021190:CDS | 15.0% |
| !!! | ATAAGAATTTTTCAAATAAG+TGG | - | chr7_1:45355515-45355534 | Msa1021190:CDS | 15.0% |
| !!! | TAAGAATTTTTCAAATAAGT+GGG | - | chr7_1:45355590-45355609 | Msa1021190:intron | 15.0% |
| !!! | TAAACAAAAGTTAACTTTTT+AGG | + | chr7_1:45356123-45356142 | None:intergenic | 15.0% |
| !! | AACCAAAAAAAAAATAGTTA+TGG | - | chr7_1:45356664-45356683 | Msa1021190:intron | 15.0% |
| !! | ACCAAAAAAAAAATAGTTAT+GGG | - | chr7_1:45356665-45356684 | Msa1021190:intron | 15.0% |
| !! | AAATTAGTGACAAAATAAAA+AGG | + | chr7_1:45357554-45357573 | None:intergenic | 15.0% |
| !! | TAGGAAAAAATTAAAAGAAA+TGG | + | chr7_1:45357829-45357848 | None:intergenic | 15.0% |
| !!! | TAAATCACTAATTTAAGATT+GGG | + | chr7_1:45358125-45358144 | None:intergenic | 15.0% |
| !!! | TTTACTTTTTTCTTTTGTTT+TGG | - | chr7_1:45358141-45358160 | Msa1021190:intron | 15.0% |
| !! | TTTAGATTTAGTTAAATGTA+AGG | - | chr7_1:45358466-45358485 | Msa1021190:CDS | 15.0% |
| !! | TTAGATTTAGTTAAATGTAA+GGG | - | chr7_1:45358467-45358486 | Msa1021190:CDS | 15.0% |
| !! | AATATAAAAACAACACAAAG+GGG | + | chr7_1:45355309-45355328 | None:intergenic | 20.0% |
| !! | GAATATAAAAACAACACAAA+GGG | + | chr7_1:45355310-45355329 | None:intergenic | 20.0% |
| !! | AGAATATAAAAACAACACAA+AGG | + | chr7_1:45355311-45355330 | None:intergenic | 20.0% |
| !!! | ATGTTTCTATATTTGTATGA+AGG | - | chr7_1:45355391-45355410 | Msa1021190:CDS | 20.0% |
| !!! | GGGTTTTACAATTTTTTATA+TGG | - | chr7_1:45355536-45355555 | Msa1021190:CDS | 20.0% |
| !! | CAATTGTCCATTTAAAAAAT+TGG | + | chr7_1:45355650-45355669 | None:intergenic | 20.0% |
| !! | AAACATTAAACGAAAATCTA+GGG | + | chr7_1:45355901-45355920 | None:intergenic | 20.0% |
| !! | AAAACATTAAACGAAAATCT+AGG | + | chr7_1:45355902-45355921 | None:intergenic | 20.0% |
| !!! | GAAATTATTTTCCATTTTGT+TGG | + | chr7_1:45356393-45356412 | None:intergenic | 20.0% |
| !! | ACAAAATGGAAAATAATTTC+TGG | - | chr7_1:45356393-45356412 | Msa1021190:intron | 20.0% |
| !! | CAAAATGGAAAATAATTTCT+GGG | - | chr7_1:45356394-45356413 | Msa1021190:intron | 20.0% |
| !!! | TTTTTGGTTACAAAAAGTTT+AGG | + | chr7_1:45356653-45356672 | None:intergenic | 20.0% |
| !! | CCAAAAAAAAAATAGTTATG+GGG | - | chr7_1:45356666-45356685 | Msa1021190:intron | 20.0% |
| !! | CAAAAAAAAAATAGTTATGG+GGG | - | chr7_1:45356667-45356686 | Msa1021190:intron | 20.0% |
| !! | AAAAAAAAAATAGTTATGGG+GGG | - | chr7_1:45356668-45356687 | Msa1021190:intron | 20.0% |
| !!! | TAATTTCCACTTGTTTTTTT+TGG | - | chr7_1:45356773-45356792 | Msa1021190:intron | 20.0% |
| !!! | AATTTCCACTTGTTTTTTTT+GGG | - | chr7_1:45356774-45356793 | Msa1021190:intron | 20.0% |
| !!! | ATATTCCACTGTTATTTTAA+AGG | - | chr7_1:45356799-45356818 | Msa1021190:intron | 20.0% |
| !!! | TATTCCACTGTTATTTTAAA+GGG | - | chr7_1:45356800-45356819 | Msa1021190:intron | 20.0% |
| !! | CAGAATCTTAAAATTCAAAA+TGG | + | chr7_1:45356896-45356915 | None:intergenic | 20.0% |
| !!! | CATTTTGAATTTTAAGATTC+TGG | - | chr7_1:45356894-45356913 | Msa1021190:intron | 20.0% |
| !! | AACATAAATTAATACACTTC+TGG | + | chr7_1:45356945-45356964 | None:intergenic | 20.0% |
| !!! | GTAAATCACTAATTTAAGAT+TGG | + | chr7_1:45358126-45358145 | None:intergenic | 20.0% |
| !! | GCATATTAGTATTAATAATC+AGG | + | chr7_1:45358175-45358194 | None:intergenic | 20.0% |
| !! | ATATAAACAACATATCACAT+TGG | + | chr7_1:45358204-45358223 | None:intergenic | 20.0% |
| !!! | ATATGTTGTTTATATTTTGC+AGG | - | chr7_1:45358209-45358228 | Msa1021190:intron | 20.0% |
| !!! | AATGAAAATGGTGATGATTT+TGG | - | chr7_1:45355183-45355202 | Msa1021190:CDS | 25.0% |
| ! | ACACATAAGCATAAAATTCA+GGG | + | chr7_1:45355474-45355493 | None:intergenic | 25.0% |
| ! | AACACATAAGCATAAAATTC+AGG | + | chr7_1:45355475-45355494 | None:intergenic | 25.0% |
| ! | TGAAGAAGTAAAAAAGAGTT+GGG | + | chr7_1:45355712-45355731 | None:intergenic | 25.0% |
| !! | TTTTTGCTTATAATAGTGAC+CGG | + | chr7_1:45356053-45356072 | None:intergenic | 25.0% |
| ! | CATTCAATAAATGATGTATG+TGG | - | chr7_1:45356088-45356107 | Msa1021190:intron | 25.0% |
| !!! | CTTTTGTTTATAATAGTGAC+CGG | - | chr7_1:45356133-45356152 | Msa1021190:intron | 25.0% |
| ! | TGATTACATAACCAACAAAA+TGG | - | chr7_1:45356379-45356398 | Msa1021190:intron | 25.0% |
| !!! | CCCCATAACTATTTTTTTTT+TGG | + | chr7_1:45356669-45356688 | None:intergenic | 25.0% |
| ! | AACAAGTGGAAATTACAAAA+TGG | + | chr7_1:45356768-45356787 | None:intergenic | 25.0% |
| ! | TATAACCCAAAAAAAACAAG+TGG | + | chr7_1:45356782-45356801 | None:intergenic | 25.0% |
| !!! | TTTTCCCTTTAAAATAACAG+TGG | + | chr7_1:45356807-45356826 | None:intergenic | 25.0% |
| ! | AGTTAATATATGACCAATTG+TGG | + | chr7_1:45356858-45356877 | None:intergenic | 25.0% |
| !! | GACAAATCATATTTTACGTT+AGG | + | chr7_1:45357096-45357115 | None:intergenic | 25.0% |
| ! | TCATTTCATCTTGACTATTA+TGG | + | chr7_1:45357250-45357269 | None:intergenic | 25.0% |
| ! | CAAGCAACAAAAAAAATACA+AGG | + | chr7_1:45357424-45357443 | None:intergenic | 25.0% |
| ! | TTTAGTTAAATGTAAGGGTT+AGG | - | chr7_1:45358472-45358491 | Msa1021190:CDS | 25.0% |
| ! | TTAGTTAAATGTAAGGGTTA+GGG | - | chr7_1:45358473-45358492 | Msa1021190:CDS | 25.0% |
| !! | TTGTGTTGATAAATTTCGTA+GGG | - | chr7_1:45358550-45358569 | Msa1021190:CDS | 25.0% |
| ! | TCTTCTCTTCTCATTTTCAA+TGG | - | chr7_1:45354873-45354892 | Msa1021190:three_prime_UTR | 30.0% |
| ! | CTTCTCTTCTCATTTTCAAT+GGG | - | chr7_1:45354874-45354893 | Msa1021190:three_prime_UTR | 30.0% |
| AACACAAAGGGGAAAAAAAA+CGG | + | chr7_1:45355298-45355317 | None:intergenic | 30.0% | |
| TGAAATTCATAGCAGAGAAT+AGG | - | chr7_1:45355418-45355437 | Msa1021190:CDS | 30.0% | |
| GAAATTCATAGCAGAGAATA+GGG | - | chr7_1:45355419-45355438 | Msa1021190:CDS | 30.0% | |
| CTGAAGAAGTAAAAAAGAGT+TGG | + | chr7_1:45355713-45355732 | None:intergenic | 30.0% | |
| ! | TTTAACTTCCATGTGATTGT+TGG | - | chr7_1:45355920-45355939 | Msa1021190:intron | 30.0% |
| GTAAAGTTCTGTTAGTACAA+AGG | - | chr7_1:45355953-45355972 | Msa1021190:intron | 30.0% | |
| !!! | GTATTTTTTATCTGCTGCAT+TGG | - | chr7_1:45356188-45356207 | Msa1021190:intron | 30.0% |
| CTTCTTACATTAATGAGTTG+TGG | - | chr7_1:45356303-45356322 | Msa1021190:intron | 30.0% | |
| TCTACTCCTAAAGTAGTTAT+GGG | - | chr7_1:45356444-45356463 | Msa1021190:intron | 30.0% | |
| TGGTTACAAAAAGTTTAGGT+GGG | + | chr7_1:45356649-45356668 | None:intergenic | 30.0% | |
| TTGGTTACAAAAAGTTTAGG+TGG | + | chr7_1:45356650-45356669 | None:intergenic | 30.0% | |
| ! | CTTAATTGAGTCGTATTTTG+AGG | - | chr7_1:45356742-45356761 | Msa1021190:intron | 30.0% |
| !! | ATTTTAAAGGGAAAAACGAG+TGG | - | chr7_1:45356812-45356831 | Msa1021190:intron | 30.0% |
| AAACGAGTGGAATTACAAAA+TGG | - | chr7_1:45356825-45356844 | Msa1021190:intron | 30.0% | |
| AAATGGCAAATTTCCACAAT+TGG | - | chr7_1:45356842-45356861 | Msa1021190:intron | 30.0% | |
| ATCAATTTACAAAGTGCACT+TGG | + | chr7_1:45357069-45357088 | None:intergenic | 30.0% | |
| TCGATAAATTGGAAGAAGAT+TGG | + | chr7_1:45357118-45357137 | None:intergenic | 30.0% | |
| ! | TTTTCATGAGCGAATATTTC+TGG | - | chr7_1:45357154-45357173 | Msa1021190:intron | 30.0% |
| AAACACATCAAACTGCAAAT+AGG | + | chr7_1:45357350-45357369 | None:intergenic | 30.0% | |
| TTTGATGTGTTTCAGATTTC+TGG | - | chr7_1:45357358-45357377 | Msa1021190:intron | 30.0% | |
| GAAAAGTAACTGGCATTTAT+TGG | + | chr7_1:45357471-45357490 | None:intergenic | 30.0% | |
| GCAAAGGAATCTAATAGAAT+AGG | + | chr7_1:45357848-45357867 | None:intergenic | 30.0% | |
| CTATTAAAATGGCTTAGCAA+AGG | + | chr7_1:45357864-45357883 | None:intergenic | 30.0% | |
| TATTCCAACAGCTTATGAAA+TGG | - | chr7_1:45358022-45358041 | Msa1021190:intron | 30.0% | |
| CTACGAAATTTATCAACACA+AGG | + | chr7_1:45358551-45358570 | None:intergenic | 30.0% | |
| ! | CTTGTGTTGATAAATTTCGT+AGG | - | chr7_1:45358549-45358568 | Msa1021190:CDS | 30.0% |
| AACTTGACAGATAAATTTCC+AGG | + | chr7_1:45358588-45358607 | None:intergenic | 30.0% | |
| AAATGAGAAGAGAAGAGAAG+CGG | + | chr7_1:45354869-45354888 | None:intergenic | 35.0% | |
| ATGAAGAAATCCAAAATCGC+CGG | - | chr7_1:45354904-45354923 | Msa1021190:three_prime_UTR | 35.0% | |
| TGATTGTTCGGTTGAGAAAT+TGG | - | chr7_1:45355137-45355156 | Msa1021190:three_prime_UTR | 35.0% | |
| GATTGTTCGGTTGAGAAATT+GGG | - | chr7_1:45355138-45355157 | Msa1021190:three_prime_UTR | 35.0% | |
| GCTGAAGAGGAAAATGAAAA+TGG | - | chr7_1:45355171-45355190 | Msa1021190:exon | 35.0% | |
| !!! | TTTGGTGTTGAAGGTTCTTT+TGG | - | chr7_1:45355201-45355220 | Msa1021190:CDS | 35.0% |
| GAAAATTTCGCAGAGATTGA+TGG | - | chr7_1:45355225-45355244 | Msa1021190:CDS | 35.0% | |
| GTGTTGAATTAGTTGCATGT+AGG | - | chr7_1:45355361-45355380 | Msa1021190:intron | 35.0% | |
| ! | TAACTTCTGTGACTTGTGAT+AGG | - | chr7_1:45355991-45356010 | Msa1021190:intron | 35.0% |
| TTGTTTATAATAGTGACCGG+AGG | - | chr7_1:45356136-45356155 | Msa1021190:intron | 35.0% | |
| TGTTTATAATAGTGACCGGA+GGG | - | chr7_1:45356137-45356156 | Msa1021190:intron | 35.0% | |
| TAAGTAATAACTACTCCCTC+CGG | + | chr7_1:45356155-45356174 | None:intergenic | 35.0% | |
| GTCTACTCCTAAAGTAGTTA+TGG | - | chr7_1:45356443-45356462 | Msa1021190:intron | 35.0% | |
| CTACTCCTAAAGTAGTTATG+GGG | - | chr7_1:45356445-45356464 | Msa1021190:intron | 35.0% | |
| TACTCCTAAAGTAGTTATGG+GGG | - | chr7_1:45356446-45356465 | Msa1021190:intron | 35.0% | |
| ! | ACAAAAAGTTTAGGTGGGTT+CGG | + | chr7_1:45356644-45356663 | None:intergenic | 35.0% |
| TCCCAGATCAATAGTAAACA+GGG | + | chr7_1:45356973-45356992 | None:intergenic | 35.0% | |
| ATCCCAGATCAATAGTAAAC+AGG | + | chr7_1:45356974-45356993 | None:intergenic | 35.0% | |
| ! | ATTGATCTGGGATTTCCTAT+AGG | - | chr7_1:45356981-45357000 | Msa1021190:intron | 35.0% |
| !! | CATTCACTTTTCCTGTAAGT+TGG | - | chr7_1:45357017-45357036 | Msa1021190:intron | 35.0% |
| CATTCAAGCTGTCGATAAAT+TGG | + | chr7_1:45357129-45357148 | None:intergenic | 35.0% | |
| AGGTGTCTCATATACATACA+TGG | - | chr7_1:45357322-45357341 | Msa1021190:intron | 35.0% | |
| GGTGTCTCATATACATACAT+GGG | - | chr7_1:45357323-45357342 | Msa1021190:intron | 35.0% | |
| GTGTCTCATATACATACATG+GGG | - | chr7_1:45357324-45357343 | Msa1021190:intron | 35.0% | |
| !! | ATGTGTTTCAGATTTCTGGT+TGG | - | chr7_1:45357362-45357381 | Msa1021190:intron | 35.0% |
| TGCAGTGAATGAGAAAGATA+TGG | - | chr7_1:45357388-45357407 | Msa1021190:intron | 35.0% | |
| ! | TCCTACTCTAGAAAAGTAAC+TGG | + | chr7_1:45357481-45357500 | None:intergenic | 35.0% |
| CGTCATGAAAATGCAAATGT+TGG | + | chr7_1:45357628-45357647 | None:intergenic | 35.0% | |
| CAAACCAAAATTCTTGGTCT+TGG | + | chr7_1:45357668-45357687 | None:intergenic | 35.0% | |
| !!! | CAAGACCAAGAATTTTGGTT+TGG | - | chr7_1:45357666-45357685 | Msa1021190:intron | 35.0% |
| TGTGACCAAACCAAAATTCT+TGG | + | chr7_1:45357768-45357787 | None:intergenic | 35.0% | |
| TGTGACCAAACCAAAATTCT+TGG | - | chr7_1:45357768-45357787 | Msa1021190:intron | 35.0% | |
| !!! | CATGACCAAGAATTTTGGTT+TGG | + | chr7_1:45357776-45357795 | None:intergenic | 35.0% |
| CAAACCAAAATTCTTGGTCA+TGG | - | chr7_1:45357774-45357793 | Msa1021190:intron | 35.0% | |
| ATGAAAGAGAAACACTTGTG+TGG | + | chr7_1:45357801-45357820 | None:intergenic | 35.0% | |
| !! | TTGTTGTTAACAGAAGCACT+AGG | - | chr7_1:45357892-45357911 | Msa1021190:intron | 35.0% |
| !! | TGTTGTTAACAGAAGCACTA+GGG | - | chr7_1:45357893-45357912 | Msa1021190:intron | 35.0% |
| CACACCTTGTAGTTTAATCA+GGG | - | chr7_1:45357920-45357939 | Msa1021190:intron | 35.0% | |
| GAATCCCTGATTAAACTACA+AGG | + | chr7_1:45357927-45357946 | None:intergenic | 35.0% | |
| GCATGTGTTCTTGAATTATG+CGG | + | chr7_1:45357995-45358014 | None:intergenic | 35.0% | |
| TCATCCATTTCATAAGCTGT+TGG | + | chr7_1:45358029-45358048 | None:intergenic | 35.0% | |
| AATGGATGAGTTCTTTGCTT+TGG | - | chr7_1:45358040-45358059 | Msa1021190:intron | 35.0% | |
| GCAGCAACAAGCATTATTTA+TGG | - | chr7_1:45358070-45358089 | Msa1021190:intron | 35.0% | |
| ATGATCTCAAGCGATCTAAA+TGG | + | chr7_1:45358373-45358392 | None:intergenic | 35.0% | |
| AGATCATCTTGTTCAGCATA+AGG | - | chr7_1:45358386-45358405 | Msa1021190:CDS | 35.0% | |
| GATCATCTTGTTCAGCATAA+GGG | - | chr7_1:45358387-45358406 | Msa1021190:CDS | 35.0% | |
| TTAAATGTAAGGGTTAGGGA+GGG | - | chr7_1:45358477-45358496 | Msa1021190:CDS | 35.0% | |
| AAGAGAGAGAGAGAAAGAGA+GGG | + | chr7_1:45354845-45354864 | None:intergenic | 40.0% | |
| AATGAGAAGAGAAGAGAAGC+GGG | + | chr7_1:45354868-45354887 | None:intergenic | 40.0% | |
| GAAGAGGAATCAGAGTGATT+CGG | + | chr7_1:45355024-45355043 | None:intergenic | 40.0% | |
| !!! | GGTGATGATTTTGGTGTTGA+AGG | - | chr7_1:45355192-45355211 | Msa1021190:CDS | 40.0% |
| ! | CAGAGATTGATGGTAGAGAT+AGG | - | chr7_1:45355235-45355254 | Msa1021190:intron | 40.0% |
| TGCTTATAATAGTGACCGGA+GGG | + | chr7_1:45356049-45356068 | None:intergenic | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | + | chr7_1:45356050-45356069 | None:intergenic | 40.0% | |
| TGTGGTACCAATAATGCAGA+AGG | - | chr7_1:45356321-45356340 | Msa1021190:intron | 40.0% | |
| GTGGTACCAATAATGCAGAA+GGG | - | chr7_1:45356322-45356341 | Msa1021190:intron | 40.0% | |
| TCAACACCCTTCTGCATTAT+TGG | + | chr7_1:45356331-45356350 | None:intergenic | 40.0% | |
| TACCTCTATAAGTGCCCTTT+GGG | - | chr7_1:45356579-45356598 | Msa1021190:intron | 40.0% | |
| ! | GACTCTCGAGAGTTATTTCA+AGG | + | chr7_1:45356923-45356942 | None:intergenic | 40.0% |
| TCCCCTGTTTACTATTGATC+TGG | - | chr7_1:45356968-45356987 | Msa1021190:intron | 40.0% | |
| CCCAGATCAATAGTAAACAG+GGG | + | chr7_1:45356972-45356991 | None:intergenic | 40.0% | |
| CCCCTGTTTACTATTGATCT+GGG | - | chr7_1:45356969-45356988 | Msa1021190:intron | 40.0% | |
| ! | TGTGTATTTTCCCTGCCTAT+AGG | + | chr7_1:45356999-45357018 | None:intergenic | 40.0% |
| !! | ATTCAGAGGTACCAACTTAC+AGG | + | chr7_1:45357031-45357050 | None:intergenic | 40.0% |
| GGTACCTCTGAATGAAAGAT+TGG | - | chr7_1:45357038-45357057 | Msa1021190:intron | 40.0% | |
| TGAGCATGAGTGAAGATTTC+TGG | - | chr7_1:45357184-45357203 | Msa1021190:intron | 40.0% | |
| AACACGACACATGAGAGTTA+TGG | + | chr7_1:45357297-45357316 | None:intergenic | 40.0% | |
| !!! | GCCAGTTACTTTTCTAGAGT+AGG | - | chr7_1:45357477-45357496 | Msa1021190:intron | 40.0% |
| CAACAGTTATCATGCAGTTC+TGG | - | chr7_1:45357580-45357599 | Msa1021190:intron | 40.0% | |
| CATGACGAGAAAATCTTGTG+TGG | - | chr7_1:45357641-45357660 | Msa1021190:intron | 40.0% | |
| ! | TGGACCAAGACCAAGAATTT+TGG | - | chr7_1:45357661-45357680 | Msa1021190:intron | 40.0% |
| ! | TGGACCATGACCAAGAATTT+TGG | + | chr7_1:45357781-45357800 | None:intergenic | 40.0% |
| GCACACCTTGTAGTTTAATC+AGG | - | chr7_1:45357919-45357938 | Msa1021190:intron | 40.0% | |
| TTTGTCTTGTGGTTGAACCA+GGG | + | chr7_1:45357965-45357984 | None:intergenic | 40.0% | |
| AGCTCTGCTTGAAATCCAAA+TGG | + | chr7_1:45358310-45358329 | None:intergenic | 40.0% | |
| TCTTGTTCAGCATAAGGGAA+AGG | - | chr7_1:45358392-45358411 | Msa1021190:CDS | 40.0% | |
| CTTGTTCAGCATAAGGGAAA+GGG | - | chr7_1:45358393-45358412 | Msa1021190:CDS | 40.0% | |
| GTTAAATGTAAGGGTTAGGG+AGG | - | chr7_1:45358476-45358495 | Msa1021190:CDS | 40.0% | |
| GTAGGGAATAACAGTTATCC+TGG | - | chr7_1:45358567-45358586 | Msa1021190:CDS | 40.0% | |
| GAAGAGAGAGAGAGAAAGAG+AGG | + | chr7_1:45354846-45354865 | None:intergenic | 45.0% | |
| GGAGGGTGATTCCATGATTA+CGG | + | chr7_1:45354941-45354960 | None:intergenic | 45.0% | |
| ATCACGAAGCCTGGAATTTC+CGG | + | chr7_1:45355121-45355140 | None:intergenic | 45.0% | |
| TTCCAGGCTTCGTGATTGTT+CGG | - | chr7_1:45355125-45355144 | Msa1021190:three_prime_UTR | 45.0% | |
| GGGAAATTTCTGTGCTGAAG+AGG | - | chr7_1:45355158-45355177 | Msa1021190:three_prime_UTR | 45.0% | |
| CAGTGCTACCAACAATCACA+TGG | + | chr7_1:45355931-45355950 | None:intergenic | 45.0% | |
| !! | TGTGATTGTTGGTAGCACTG+AGG | - | chr7_1:45355931-45355950 | Msa1021190:intron | 45.0% |
| CTCTCTCATTATACTCCCTC+CGG | - | chr7_1:45356031-45356050 | Msa1021190:intron | 45.0% | |
| TGGTCCCCCATAACTACTTT+AGG | + | chr7_1:45356453-45356472 | None:intergenic | 45.0% | |
| !! | TTGGCTCAGTTGGTAAGGAA+CGG | - | chr7_1:45356480-45356499 | Msa1021190:intron | 45.0% |
| GTACCTCTATAAGTGCCCTT+TGG | - | chr7_1:45356578-45356597 | Msa1021190:intron | 45.0% | |
| ! | ATCTGGGATTTCCTATAGGC+AGG | - | chr7_1:45356985-45357004 | Msa1021190:intron | 45.0% |
| ! | TCTGGGATTTCCTATAGGCA+GGG | - | chr7_1:45356986-45357005 | Msa1021190:intron | 45.0% |
| GCGTCCAATCTTTCATTCAG+AGG | + | chr7_1:45357045-45357064 | None:intergenic | 45.0% | |
| CTCATGTGTCGTGTTAGCAA+AGG | - | chr7_1:45357302-45357321 | Msa1021190:intron | 45.0% | |
| GAGAGAAGAGAAGACAGAGA+AGG | - | chr7_1:45357732-45357751 | Msa1021190:intron | 45.0% | |
| ! | TCAAGTGTCATTCATACCCC+TGG | - | chr7_1:45357945-45357964 | Msa1021190:intron | 45.0% |
| TTGTCTTGTGGTTGAACCAG+GGG | + | chr7_1:45357964-45357983 | None:intergenic | 45.0% | |
| CTTTGTCTTGTGGTTGAACC+AGG | + | chr7_1:45357966-45357985 | None:intergenic | 45.0% | |
| CTGGTTCAACCACAAGACAA+AGG | - | chr7_1:45357964-45357983 | Msa1021190:intron | 45.0% | |
| ! | AATCCAAATGGCTGGTCCTA+GGG | + | chr7_1:45358298-45358317 | None:intergenic | 45.0% |
| ! | AAATCCAAATGGCTGGTCCT+AGG | + | chr7_1:45358299-45358318 | None:intergenic | 45.0% |
| CTGCTTGAAATCCAAATGGC+TGG | + | chr7_1:45358306-45358325 | None:intergenic | 45.0% | |
| ! | TAAGGGTTAGGGAGGGTATA+TGG | - | chr7_1:45358484-45358503 | Msa1021190:CDS | 45.0% |
| GGGTGATTCCATGATTACGG+CGG | + | chr7_1:45354938-45354957 | None:intergenic | 50.0% | |
| !! | TTTCTGGAGAGCGAGGGTTT+TGG | + | chr7_1:45354995-45355014 | None:intergenic | 50.0% |
| ! | AGTGATTCGGCGGAGATTTC+TGG | + | chr7_1:45355011-45355030 | None:intergenic | 50.0% |
| ! | GAGGAATCAGAGTGATTCGG+CGG | + | chr7_1:45355021-45355040 | None:intergenic | 50.0% |
| AAAGCGGTGGAGGAACCTTA+CGG | + | chr7_1:45355074-45355093 | None:intergenic | 50.0% | |
| TCACGAAGCCTGGAATTTCC+GGG | + | chr7_1:45355120-45355139 | None:intergenic | 50.0% | |
| AACCGAACAATCACGAAGCC+TGG | + | chr7_1:45355130-45355149 | None:intergenic | 50.0% | |
| !! | ACACGTTGGCTCAGTTGGTA+AGG | - | chr7_1:45356475-45356494 | Msa1021190:intron | 50.0% |
| !! | TGGCTCAGTTGGTAAGGAAC+GGG | - | chr7_1:45356481-45356500 | Msa1021190:intron | 50.0% |
| CACAACCTTCTGCAAGGAAG+TGG | + | chr7_1:45356507-45356526 | None:intergenic | 50.0% | |
| CGAACACACAACCTTCTGCA+AGG | + | chr7_1:45356513-45356532 | None:intergenic | 50.0% | |
| GATTCCCTCTACCGATGTGA+GGG | - | chr7_1:45356532-45356551 | Msa1021190:intron | 50.0% | |
| CACATGAGAGTTATGGCTGC+TGG | + | chr7_1:45357290-45357309 | None:intergenic | 50.0% | |
| GTGAATGATGTACCTCTCCC+AGG | - | chr7_1:45358247-45358266 | Msa1021190:CDS | 50.0% | |
| ATGATGTACCTCTCCCAGGA+CGG | - | chr7_1:45358251-45358270 | Msa1021190:CDS | 50.0% | |
| ! | CGGAGATTTCTGGAGAGCGA+GGG | + | chr7_1:45355001-45355020 | None:intergenic | 55.0% |
| GTGGAGGAACCTTACGGAGT+CGG | + | chr7_1:45355068-45355087 | None:intergenic | 55.0% | |
| CTCTCCTTGCGAGGTGAAAG+CGG | + | chr7_1:45355090-45355109 | None:intergenic | 55.0% | |
| CTTTCACCTCGCAAGGAGAG+CGG | - | chr7_1:45355090-45355109 | Msa1021190:three_prime_UTR | 55.0% | |
| TATGGGGGACCAACACACGT+TGG | - | chr7_1:45356461-45356480 | Msa1021190:intron | 55.0% | |
| CCAACTGAGCCAACGTGTGT+TGG | + | chr7_1:45356473-45356492 | None:intergenic | 55.0% | |
| !! | CCAACACACGTTGGCTCAGT+TGG | - | chr7_1:45356470-45356489 | Msa1021190:intron | 55.0% |
| CGATTCCCTCTACCGATGTG+AGG | - | chr7_1:45356531-45356550 | Msa1021190:intron | 55.0% | |
| ACTGCCCTCACATCGGTAGA+GGG | + | chr7_1:45356539-45356558 | None:intergenic | 55.0% | |
| TACCGATGTGAGGGCAGTGT+TGG | - | chr7_1:45356541-45356560 | Msa1021190:intron | 55.0% | |
| CACCAACACTGCCCTCACAT+CGG | + | chr7_1:45356546-45356565 | None:intergenic | 55.0% | |
| !! | GATGTGAGGGCAGTGTTGGT+GGG | - | chr7_1:45356545-45356564 | Msa1021190:intron | 55.0% |
| !! | GGCCCAAAGGGCACTTATAG+AGG | + | chr7_1:45356584-45356603 | None:intergenic | 55.0% |
| ! | AGTTTAGGTGGGTTCGGCTC+CGG | + | chr7_1:45356638-45356657 | None:intergenic | 55.0% |
| TTGCTTGAGCCCACTGAGTC+AGG | - | chr7_1:45357437-45357456 | Msa1021190:intron | 55.0% | |
| TGCTTGAGCCCACTGAGTCA+GGG | - | chr7_1:45357438-45357457 | Msa1021190:intron | 55.0% | |
| GAGACAAGCCCTGACTCAGT+GGG | + | chr7_1:45357449-45357468 | None:intergenic | 55.0% | |
| GCGGTTCGTCCTTTGTCTTG+TGG | + | chr7_1:45357976-45357995 | None:intergenic | 55.0% | |
| TCTCCCAGGACGGTACGAAT+GGG | - | chr7_1:45358261-45358280 | Msa1021190:CDS | 55.0% | |
| ATGGGTCCCTGTACTTCCCT+AGG | - | chr7_1:45358279-45358298 | Msa1021190:CDS | 55.0% | |
| ! | GCTGGTCCTAGGGAAGTACA+GGG | + | chr7_1:45358288-45358307 | None:intergenic | 55.0% |
| CTTCCCTAGGACCAGCCATT+TGG | - | chr7_1:45358292-45358311 | Msa1021190:CDS | 55.0% | |
| TGACGTCGCCGCCGTAATCA+TGG | - | chr7_1:45354927-45354946 | Msa1021190:three_prime_UTR | 60.0% | |
| ACGTGTTCGAACACCGACGG+CGG | + | chr7_1:45354971-45354990 | None:intergenic | 60.0% | |
| GGCACGTGTTCGAACACCGA+CGG | + | chr7_1:45354974-45354993 | None:intergenic | 60.0% | |
| ! | GCGGAGATTTCTGGAGAGCG+AGG | + | chr7_1:45355002-45355021 | None:intergenic | 60.0% |
| GAGGAACCTTACGGAGTCGG+CGG | + | chr7_1:45355065-45355084 | None:intergenic | 60.0% | |
| TTGCGAGGTGAAAGCGGTGG+AGG | + | chr7_1:45355084-45355103 | None:intergenic | 60.0% | |
| TCCACCGCTTTCACCTCGCA+AGG | - | chr7_1:45355083-45355102 | Msa1021190:three_prime_UTR | 60.0% | |
| TCCTTGCGAGGTGAAAGCGG+TGG | + | chr7_1:45355087-45355106 | None:intergenic | 60.0% | |
| GCGGTTCTCCCGGAAATTCC+AGG | - | chr7_1:45355109-45355128 | Msa1021190:three_prime_UTR | 60.0% | |
| ACGGGCCACTTCCTTGCAGA+AGG | - | chr7_1:45356499-45356518 | Msa1021190:intron | 60.0% | |
| CACTGCCCTCACATCGGTAG+AGG | + | chr7_1:45356540-45356559 | None:intergenic | 60.0% | |
| ! | CGATGTGAGGGCAGTGTTGG+TGG | - | chr7_1:45356544-45356563 | Msa1021190:intron | 60.0% |
| TAAGTGCCCTTTGGGCCTCC+CGG | - | chr7_1:45356587-45356606 | Msa1021190:intron | 60.0% | |
| GGAGACAAGCCCTGACTCAG+TGG | + | chr7_1:45357450-45357469 | None:intergenic | 60.0% | |
| CATTCGTACCGTCCTGGGAG+AGG | + | chr7_1:45358262-45358281 | None:intergenic | 60.0% | |
| CTCTCCCAGGACGGTACGAA+TGG | - | chr7_1:45358260-45358279 | Msa1021190:CDS | 60.0% | |
| GGACCCATTCGTACCGTCCT+GGG | + | chr7_1:45358267-45358286 | None:intergenic | 60.0% | |
| ! | GGCTGGTCCTAGGGAAGTAC+AGG | + | chr7_1:45358289-45358308 | None:intergenic | 60.0% |
| ! | GGCGACGTCACCGGCGATTT+TGG | + | chr7_1:45354917-45354936 | None:intergenic | 65.0% |
| GATTACGGCGGCGACGTCAC+CGG | + | chr7_1:45354926-45354945 | None:intergenic | 65.0% | |
| AACACCGACGGCGGTGGAGT+GGG | + | chr7_1:45354962-45354981 | None:intergenic | 65.0% | |
| TGTTCGAACACCGACGGCGG+TGG | + | chr7_1:45354968-45354987 | None:intergenic | 65.0% | |
| GCGGAGCTGGAGGAAGGAAG+AGG | + | chr7_1:45355040-45355059 | None:intergenic | 65.0% | |
| GGAGAACCGCTCTCCTTGCG+AGG | + | chr7_1:45355099-45355118 | None:intergenic | 65.0% | |
| CGCAAGGAGAGCGGTTCTCC+CGG | - | chr7_1:45355099-45355118 | Msa1021190:three_prime_UTR | 65.0% | |
| TCCGGTCACCACCAGGGTCA+GGG | + | chr7_1:45356620-45356639 | None:intergenic | 65.0% | |
| TTCGGCTCCGGTCACCACCA+GGG | + | chr7_1:45356626-45356645 | None:intergenic | 65.0% | |
| GGGACCCATTCGTACCGTCC+TGG | + | chr7_1:45358268-45358287 | None:intergenic | 65.0% | |
| GAACACCGACGGCGGTGGAG+TGG | + | chr7_1:45354963-45354982 | None:intergenic | 70.0% | |
| CCTTACGGAGTCGGCGGCTG+CGG | + | chr7_1:45355059-45355078 | None:intergenic | 70.0% | |
| ACGCCTCCGGGAGGCCCAAA+GGG | + | chr7_1:45356596-45356615 | None:intergenic | 70.0% | |
| ! | GCCCTGACCCTGGTGGTGAC+CGG | - | chr7_1:45356616-45356635 | Msa1021190:intron | 70.0% |
| CTCCGGTCACCACCAGGGTC+AGG | + | chr7_1:45356621-45356640 | None:intergenic | 70.0% | |
| GTTCGGCTCCGGTCACCACC+AGG | + | chr7_1:45356627-45356646 | None:intergenic | 70.0% | |
| CCGACGGCGGTGGAGTGGGA+GGG | + | chr7_1:45354958-45354977 | None:intergenic | 75.0% | |
| CCCTCCCACTCCACCGCCGT+CGG | - | chr7_1:45354955-45354974 | Msa1021190:three_prime_UTR | 75.0% | |
| ACCGACGGCGGTGGAGTGGG+AGG | + | chr7_1:45354959-45354978 | None:intergenic | 75.0% | |
| GCGGCTGCGGAGCTGGAGGA+AGG | + | chr7_1:45355046-45355065 | None:intergenic | 75.0% | |
| !! | CCGCAGCCGCCGACTCCGTA+AGG | - | chr7_1:45355056-45355075 | Msa1021190:three_prime_UTR | 75.0% |
| GTGCCCTTTGGGCCTCCCGG+AGG | - | chr7_1:45356590-45356609 | Msa1021190:intron | 75.0% | |
| CACGCCTCCGGGAGGCCCAA+AGG | + | chr7_1:45356597-45356616 | None:intergenic | 75.0% | |
| CAGGGTCAGGGCACGCCTCC+GGG | + | chr7_1:45356608-45356627 | None:intergenic | 75.0% | |
| CCAGGGTCAGGGCACGCCTC+CGG | + | chr7_1:45356609-45356628 | None:intergenic | 75.0% | |
| GAGGCGTGCCCTGACCCTGG+TGG | - | chr7_1:45356609-45356628 | Msa1021190:intron | 75.0% | |
| ! | GTCGGCGGCTGCGGAGCTGG+AGG | + | chr7_1:45355050-45355069 | None:intergenic | 80.0% |
| ! | GGAGTCGGCGGCTGCGGAGC+TGG | + | chr7_1:45355053-45355072 | None:intergenic | 80.0% |
| ! | GGTCAGGGCACGCCTCCGGG+AGG | + | chr7_1:45356605-45356624 | None:intergenic | 80.0% |
| !! | CCGGAGGCGTGCCCTGACCC+TGG | - | chr7_1:45356606-45356625 | Msa1021190:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 45354839 | 45358642 | 45354839 | ID=Msa1021190;Name=Msa1021190 |
| chr7_1 | mRNA | 45354839 | 45358642 | 45354839 | ID=Msa1021190-mRNA-1;Parent=Msa1021190;Name=Msa1021190-mRNA-1;_AED=0.06;_eAED=0.06;_QI=53|1|1|1|1|1|3|342|208 |
| chr7_1 | exon | 45354839 | 45355250 | 45354839 | ID=Msa1021190-mRNA-1:exon:8912;Parent=Msa1021190-mRNA-1 |
| chr7_1 | exon | 45355385 | 45355576 | 45355385 | ID=Msa1021190-mRNA-1:exon:8911;Parent=Msa1021190-mRNA-1 |
| chr7_1 | exon | 45358225 | 45358642 | 45358225 | ID=Msa1021190-mRNA-1:exon:8910;Parent=Msa1021190-mRNA-1 |
| chr7_1 | five_prime_UTR | 45358590 | 45358642 | 45358590 | ID=Msa1021190-mRNA-1:five_prime_utr;Parent=Msa1021190-mRNA-1 |
| chr7_1 | CDS | 45358225 | 45358589 | 45358225 | ID=Msa1021190-mRNA-1:cds;Parent=Msa1021190-mRNA-1 |
| chr7_1 | CDS | 45355385 | 45355576 | 45355385 | ID=Msa1021190-mRNA-1:cds;Parent=Msa1021190-mRNA-1 |
| chr7_1 | CDS | 45355181 | 45355250 | 45355181 | ID=Msa1021190-mRNA-1:cds;Parent=Msa1021190-mRNA-1 |
| chr7_1 | three_prime_UTR | 45354839 | 45355180 | 45354839 | ID=Msa1021190-mRNA-1:three_prime_utr;Parent=Msa1021190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
