AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0295000

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0295000 MtrunA17_Chr2g0328791 89.679 436 15 3 1 414 1 428 0.0 763
Msa0295000 MtrunA17_Chr4g0074711 55.072 345 136 6 8 345 67 399 2.71e-122 360
Msa0295000 MtrunA17_Chr2g0288251 52.732 366 126 9 6 349 51 391 7.16e-117 346
Msa0295000 MtrunA17_Chr4g0045221 53.156 301 112 5 12 291 113 405 2.75e-108 326
Msa0295000 MtrunA17_Chr3g0133651 50.284 352 154 8 6 352 84 419 3.08e-107 322
Msa0295000 MtrunA17_Chr1g0153871 49.713 348 159 5 13 352 95 434 8.18e-106 319
Msa0295000 MtrunA17_Chr3g0139111 30.263 304 186 8 14 300 59 353 2.44e-32 127
Msa0295000 MtrunA17_Chr4g0070231 31.475 305 180 10 14 300 45 338 1.29e-31 124
Msa0295000 MtrunA17_Chr7g0265341 28.155 309 187 9 16 317 71 351 1.47e-29 121
Msa0295000 MtrunA17_Chr7g0265341 26.804 291 191 10 14 296 157 433 6.31e-21 95.1
Msa0295000 MtrunA17_Chr1g0179701 27.336 289 179 7 16 299 63 325 5.39e-29 119
Msa0295000 MtrunA17_Chr8g0344491 31.081 296 178 11 14 294 61 345 1.22e-28 116
Msa0295000 MtrunA17_Chr1g0153181 26.129 310 193 9 16 317 33 314 9.26e-24 103
Msa0295000 MtrunA17_Chr4g0044541 26.481 287 180 8 16 297 35 295 6.47e-22 98.2
Msa0295000 MtrunA17_Chr4g0044541 27.219 169 109 5 16 173 214 379 9.88e-13 70.1
Msa0295000 MtrunA17_Chr3g0110211 32.278 158 101 3 16 173 26 177 1.93e-21 95.1
Msa0295000 MtrunA17_Chr1g0201151 28.269 283 171 10 16 293 31 286 3.83e-21 95.9
Msa0295000 MtrunA17_Chr6g0465751 27.037 270 162 8 13 277 23 262 2.65e-20 93.2
Msa0295000 MtrunA17_Chr6g0466501 24.437 311 199 9 13 317 23 303 1.68e-19 90.9
Msa0295000 MtrunA17_Chr3g0134141 27.239 268 164 7 16 278 25 266 7.28e-19 89.0
Msa0295000 MtrunA17_Chr3g0134141 28.042 189 97 4 109 287 25 184 7.36e-12 67.4
Msa0295000 MtrunA17_Chr3g0134141 26.163 172 113 5 13 173 201 369 2.68e-11 65.5
Msa0295000 MtrunA17_Chr1g0177101 28.889 180 117 3 1 172 94 270 1.12e-18 86.3
Msa0295000 MtrunA17_Chr3g0116631 32.927 164 101 4 17 174 111 271 5.15e-18 84.0
Msa0295000 MtrunA17_Chr4g0058151 29.947 187 108 6 4 180 114 287 9.19e-18 83.2
Msa0295000 MtrunA17_Chr7g0276201 22.648 287 186 8 17 297 106 362 1.36e-17 84.7
Msa0295000 MtrunA17_Chr1g0181111 31.351 185 103 5 17 180 86 267 1.08e-14 73.9
Msa0295000 MtrunA17_Chr7g0267571 25.595 168 110 3 17 172 111 275 2.15e-14 73.6
Msa0295000 MtrunA17_Chr1g0168601 31.061 132 80 4 44 171 91 215 1.17e-13 70.1
Msa0295000 MtrunA17_Chr3g0118461 27.189 217 136 4 99 314 123 318 2.33e-13 71.6
Msa0295000 MtrunA17_Chr2g0290191 27.000 200 119 5 17 203 6 191 1.37e-12 69.3
Msa0295000 MtrunA17_Chr3g0101061 27.228 202 122 5 12 202 37 224 1.63e-12 68.9
Msa0295000 MtrunA17_Chr6g0449481 27.072 181 126 2 17 197 47 221 2.08e-12 68.2
Msa0295000 MtrunA17_Chr5g0447761 28.000 200 115 6 17 203 8 191 1.54e-11 65.9
Msa0295000 MtrunA17_Chr4g0026301 21.114 341 213 9 17 334 112 419 2.09e-11 65.5
Msa0295000 MtrunA17_Chr3g0087481 28.646 192 118 6 103 288 55 233 4.95e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0295000 AT5G19350.1 66.667 420 118 10 4 411 13 422 0.0 518
Msa0295000 AT5G19350.2 66.033 421 115 10 4 411 13 418 0.0 514
Msa0295000 AT5G54900.1 54.142 338 129 8 6 335 51 370 1.33e-115 343
Msa0295000 AT1G11650.2 52.727 330 138 7 7 335 54 366 3.70e-109 327
Msa0295000 AT4G27000.1 55.631 293 123 4 8 300 73 358 1.00e-105 319
Msa0295000 AT1G49600.1 51.057 331 145 5 12 337 116 434 1.43e-104 317
Msa0295000 AT1G47490.1 50.425 353 156 10 6 352 92 431 2.00e-103 313
Msa0295000 AT1G47500.1 50.708 353 155 9 6 352 94 433 2.35e-102 311
Msa0295000 AT3G19130.1 52.013 298 121 4 9 291 102 392 9.77e-102 309
Msa0295000 AT1G49600.3 55.088 285 121 3 12 291 116 398 1.09e-101 310
Msa0295000 AT1G49600.2 55.088 285 121 3 12 291 116 398 1.09e-101 310
Msa0295000 AT1G11650.1 56.154 260 106 4 7 265 54 306 1.29e-95 289
Msa0295000 AT1G47500.2 61.176 170 63 2 6 172 94 263 2.41e-67 217
Msa0295000 AT1G47490.2 51.570 223 98 5 6 224 92 308 2.92e-67 216
Msa0295000 AT3G14100.1 31.419 296 177 10 14 294 58 342 3.96e-31 124
Msa0295000 AT1G54080.1 30.952 294 181 9 14 294 62 346 1.20e-30 122
Msa0295000 AT1G17370.2 31.507 292 179 9 14 294 53 334 2.48e-30 121
Msa0295000 AT1G17370.1 31.313 297 176 11 14 294 53 337 4.82e-30 120
Msa0295000 AT1G54080.2 30.872 298 180 10 14 294 62 350 1.20e-29 119
Msa0295000 AT2G36660.1 27.336 289 177 10 16 299 25 285 1.95e-25 108
Msa0295000 AT1G22760.1 28.276 290 174 9 16 298 50 312 4.70e-24 105
Msa0295000 AT1G22760.1 28.125 192 98 5 106 287 47 208 8.20e-14 73.9
Msa0295000 AT1G49760.1 26.045 311 194 8 16 316 46 330 5.92e-23 101
Msa0295000 AT1G49760.2 26.045 311 194 8 16 316 46 330 5.92e-23 101
Msa0295000 AT1G71770.1 26.552 290 179 9 16 298 60 322 1.14e-22 100
Msa0295000 AT1G71770.2 26.552 290 179 9 16 298 60 322 1.14e-22 100
Msa0295000 AT4G34110.1 26.103 272 160 8 16 277 37 277 1.31e-21 97.8
Msa0295000 AT4G34110.1 29.319 191 96 4 107 287 35 196 1.38e-14 76.3
Msa0295000 AT4G34110.1 27.273 176 114 5 9 173 209 381 3.15e-12 68.9
Msa0295000 AT5G50250.1 35.329 167 102 3 17 180 115 278 4.76e-21 93.2
Msa0295000 AT4G00830.2 22.965 344 207 9 17 355 118 408 1.66e-20 94.0
Msa0295000 AT4G00830.1 22.965 344 207 9 17 355 118 408 1.66e-20 94.0
Msa0295000 AT4G00830.6 22.965 344 207 9 17 355 118 408 1.66e-20 94.0
Msa0295000 AT3G16380.1 25.952 289 185 6 16 299 22 286 2.39e-20 93.6
Msa0295000 AT2G23350.1 27.239 268 164 7 16 278 47 288 2.76e-20 93.6
Msa0295000 AT2G23350.1 27.219 169 109 5 16 173 226 391 1.12e-11 67.0
Msa0295000 AT4G24770.1 35.057 174 110 3 8 180 144 315 6.38e-20 90.5
Msa0295000 AT4G24770.2 35.057 174 110 3 8 180 144 315 6.38e-20 90.5
Msa0295000 AT4G00830.4 22.674 344 208 9 17 355 118 408 2.15e-19 90.5
Msa0295000 AT3G52380.1 30.682 176 106 4 9 172 111 282 3.60e-19 88.2
Msa0295000 AT2G18510.1 29.747 158 105 3 16 173 26 177 5.84e-18 85.1
Msa0295000 AT1G60000.1 31.056 161 99 4 17 172 87 240 4.52e-17 80.9
Msa0295000 AT2G33410.1 32.370 173 99 5 17 173 8 178 6.17e-17 82.4
Msa0295000 AT2G37220.1 30.000 180 101 4 17 174 93 269 9.51e-16 77.8
Msa0295000 AT4G14300.1 31.210 157 92 4 17 160 8 161 3.66e-14 74.3
Msa0295000 AT4G14300.2 31.210 157 92 4 17 160 8 161 3.66e-14 74.3
Msa0295000 AT3G52150.2 29.255 188 106 5 4 172 61 240 3.78e-14 72.4
Msa0295000 AT3G52150.1 29.255 188 106 5 4 172 61 240 3.78e-14 72.4
Msa0295000 AT3G13224.3 30.380 158 106 2 14 171 9 162 2.74e-13 71.2
Msa0295000 AT1G48920.1 27.528 178 104 7 15 174 297 467 4.27e-13 71.2
Msa0295000 AT4G26650.1 25.820 244 146 9 110 331 17 247 8.45e-13 70.1
Msa0295000 AT4G26650.2 25.820 244 146 9 110 331 14 244 9.59e-13 70.1
Msa0295000 AT3G13224.2 30.323 155 104 2 17 171 21 171 1.91e-12 68.6
Msa0295000 AT3G13224.1 30.380 158 100 3 17 171 21 171 2.12e-12 67.0
Msa0295000 AT5G55550.5 26.540 211 126 5 13 208 4 200 3.51e-12 68.2
Msa0295000 AT5G55550.4 26.540 211 126 5 13 208 4 200 3.51e-12 68.2
Msa0295000 AT5G55550.9 26.540 211 126 5 13 208 4 200 3.51e-12 68.2
Msa0295000 AT5G55550.7 26.540 211 126 5 13 208 4 200 3.51e-12 68.2
Msa0295000 AT5G55550.1 26.540 211 126 5 13 208 4 200 3.51e-12 68.2
Msa0295000 AT5G55550.2 26.540 211 126 5 13 208 4 200 4.13e-12 68.2
Msa0295000 AT5G55550.3 26.540 211 126 5 13 208 4 200 4.13e-12 68.2
Msa0295000 AT5G55550.6 26.540 211 126 5 13 208 4 200 4.13e-12 68.2
Msa0295000 AT5G55550.11 26.540 211 126 5 13 208 4 200 4.13e-12 68.2
Msa0295000 AT2G29580.1 25.962 208 137 4 99 305 123 314 4.97e-12 67.8
Msa0295000 AT1G17640.2 27.778 162 96 3 17 169 68 217 1.35e-11 66.2
Msa0295000 AT1G17640.1 27.778 162 96 3 17 169 68 217 1.35e-11 66.2
Msa0295000 AT1G17640.3 27.778 162 96 3 17 169 68 217 1.35e-11 66.2
Msa0295000 AT5G47620.1 27.907 172 112 5 13 173 4 174 1.70e-11 66.2
Msa0295000 AT5G47620.2 27.907 172 112 5 13 173 4 174 1.70e-11 66.2
Msa0295000 AT5G47620.5 27.907 172 112 5 13 173 4 174 1.70e-11 66.2
Msa0295000 AT4G13850.4 45.312 64 34 1 110 173 37 99 1.96e-11 61.6
Msa0295000 AT1G07360.1 34.177 79 51 1 216 293 224 302 5.43e-11 64.7
Msa0295000 AT4G13850.3 45.312 64 34 1 110 173 37 99 9.17e-11 60.1

Find 158 sgRNAs with CRISPR-Local

Find 406 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAGATTTATGTTGGTAATT+TGG 0.120731 2_3:+47204792 Msa0295000:intron
CTATTTGTATTTGTACTTCC+TGG 0.235475 2_3:+47206714 Msa0295000:three_prime_UTR
AACAAACCTTCCGTTTAAAC+TGG 0.249900 2_3:+47201687 Msa0295000:CDS
AAATACCTGTCTAGCTGTTT+GGG 0.286831 2_3:-47205241 None:intergenic
CCAGAGGGACCGCCCTAAAA+TGG 0.305529 2_3:-47206649 None:intergenic
CTGATAAGTGTTGATTTAAA+TGG 0.311529 2_3:+47206979 Msa0295000:three_prime_UTR
AAAATACCTGTCTAGCTGTT+TGG 0.327900 2_3:-47205242 None:intergenic
TTCGATATTTGTGGGTGATT+TGG 0.328238 2_3:+47201757 Msa0295000:CDS
GTATTGTTTACATCGTATTC+TGG 0.332261 2_3:-47204697 None:intergenic
AACAAAACCACATGCTTTGC+CGG 0.335534 2_3:-47204890 None:intergenic
CGTTTAAACTGGGCTTCCTT+TGG 0.342734 2_3:+47201698 Msa0295000:CDS
TAGATAACGTGTCTATTGTT+TGG 0.344655 2_3:+47206929 Msa0295000:three_prime_UTR
GAATGATCGGGACCCGCATC+AGG 0.345542 2_3:-47201737 None:intergenic
GGATAGGCGATTTACAATAC+TGG 0.352727 2_3:+47201486 Msa0295000:CDS
ACAAATGATCCGAGTTTCTT+GGG 0.352764 2_3:+47205212 Msa0295000:CDS
AGTCAATGGAGTGCATACTA+TGG 0.359233 2_3:+47206024 Msa0295000:CDS
TTATATAACTTACCTGTTGC+GGG 0.367839 2_3:-47206140 None:intergenic
CCCTTACTCCTCCCAGTATT+CGG 0.368992 2_3:-47201863 None:intergenic
TCGATGAAACCATAACCTTC+TGG 0.386586 2_3:-47201596 None:intergenic
GGTTATGAAGCTTATGCATA+TGG 0.389478 2_3:+47206060 Msa0295000:CDS
AACAAATGATCCGAGTTTCT+TGG 0.398247 2_3:+47205211 Msa0295000:CDS
AAGATGCAGGGAAAGATATT+AGG 0.405827 2_3:+47205186 Msa0295000:CDS
TTTGTTATACCTTTAGGAAC+AGG 0.406458 2_3:-47202075 None:intergenic
GTTGTGACTGATCCGAATAC+TGG 0.406476 2_3:+47201851 Msa0295000:CDS
CGAACTTCTTCGAGGGATGC+TGG 0.408501 2_3:-47201455 None:intergenic
ACCGGTCAACCAGAAGGTTA+TGG 0.411937 2_3:+47201587 Msa0295000:CDS
CAAAGGAAGCCCAGTTTAAA+CGG 0.412622 2_3:-47201697 None:intergenic
CGGAAGGTTTGTTCGGTACC+AGG 0.416453 2_3:-47201677 None:intergenic
TGATTTGGCTCCGGATGTTA+CGG 0.425043 2_3:+47201772 Msa0295000:CDS
CTTTCCCTGCATCTTCTGAA+TGG 0.425808 2_3:-47205178 None:intergenic
ACCTGGAGGATGGGGACAAC+AGG 0.425840 2_3:+47205993 Msa0295000:CDS
GCGATGAGAGTGAGAGGAAT+CGG 0.427812 2_3:+47201906 Msa0295000:CDS
ACAGGAGCAGCAGCAACAAC+AGG 0.430443 2_3:-47202057 None:intergenic
ACCTGTTGTCCCCATCCTCC+AGG 0.435952 2_3:-47205994 None:intergenic
ACTGATAATTAACTCATTGT+GGG 0.441450 2_3:+47207006 Msa0295000:three_prime_UTR
TCCCGATCATTCGATATTTG+TGG 0.447211 2_3:+47201748 Msa0295000:CDS
AACTGGGCTTCCTTTGGTAT+CGG 0.452673 2_3:+47201704 Msa0295000:CDS
CCAGCATATGCATACATTGA+AGG 0.454115 2_3:-47206096 None:intergenic
GGGGCGGTGTATGCCGGCAC+TGG 0.455472 2_3:-47204658 None:intergenic
ACCATAACCTTCTGGTTGAC+CGG 0.457610 2_3:-47201588 None:intergenic
AATCCTTATGCTGCTGCTGT+TGG 0.458426 2_3:+47202018 Msa0295000:CDS
TCCGAATACTGGGAGGAGTA+AGG 0.459906 2_3:+47201862 Msa0295000:CDS
CGGTGAACGCCGCCCTGATG+CGG 0.461004 2_3:+47201724 Msa0295000:CDS
CTGCTGCAAGGATGAGGAAT+GGG 0.461294 2_3:-47206679 None:intergenic
AACTGATAATTAACTCATTG+TGG 0.462618 2_3:+47207005 Msa0295000:three_prime_UTR
TTATGCATATGGGGCTGCTC+AGG 0.463165 2_3:+47206071 Msa0295000:CDS
AGGCATTTGAGTGCCGTTGT+AGG 0.465540 2_3:-47201657 None:intergenic
GGAAATTACTTATCAACATC+GGG 0.466329 2_3:-47206313 None:intergenic
GGTGAACGCCGCCCTGATGC+GGG 0.466689 2_3:+47201725 Msa0295000:CDS
CCCGATCATTCGATATTTGT+GGG 0.467568 2_3:+47201749 Msa0295000:CDS
ATTATATAACTTACCTGTTG+CGG 0.469981 2_3:-47206141 None:intergenic
TACTTATGTTCGTAGGTTGA+AGG 0.474035 2_3:+47206217 Msa0295000:intron
GGAAGAGTTGTATGATCCTC+TGG 0.477748 2_3:+47206285 Msa0295000:CDS
TCTGGTGGAACTATATTCAC+TGG 0.479806 2_3:-47204679 None:intergenic
CTGGGAGGAGTAAGGGGTAT+GGG 0.481051 2_3:+47201870 Msa0295000:CDS
GGATTTGGGGATCAAACAAT+AGG 0.482703 2_3:-47206803 None:intergenic
CCTTCAATGTATGCATATGC+TGG 0.484513 2_3:+47206096 Msa0295000:CDS
GTTATGAAGCTTATGCATAT+GGG 0.486863 2_3:+47206061 Msa0295000:CDS
AACATAACTTAAGTTGCCTT+AGG 0.488022 2_3:+47206772 Msa0295000:three_prime_UTR
TTCACTGGGGCGGTGTATGC+CGG 0.489655 2_3:-47204664 None:intergenic
TTTGCAATGCAGATTTATGT+TGG 0.490899 2_3:+47204784 Msa0295000:intron
GCTGCTGCTCCTGTTCCTAA+AGG 0.491900 2_3:+47202066 Msa0295000:CDS
ACAAAACCACATGCTTTGCC+GGG 0.492254 2_3:-47204889 None:intergenic
GTAGGTTTGAAGAACGCGTT+CGG 0.493065 2_3:-47201639 None:intergenic
TCTAGGACGTACCTGGAGGA+TGG 0.494871 2_3:+47205983 Msa0295000:intron
TATGCATATGCTGGATATGC+TGG 0.494958 2_3:+47206105 Msa0295000:CDS
AACGCGTTCGGCGGCAGAGT+GGG 0.495405 2_3:-47201627 None:intergenic
TCGAAGAAGTTCGAACCCTA+TGG 0.495608 2_3:+47201465 Msa0295000:CDS
CTATGCACAATACCCGCAAC+AGG 0.497442 2_3:+47206128 Msa0295000:CDS
CTAGGACGTACCTGGAGGAT+GGG 0.497812 2_3:+47205984 Msa0295000:intron
GTTTAAACGGAAGGTTTGTT+CGG 0.500336 2_3:-47201684 None:intergenic
CGATGAGAGTGAGAGGAATC+GGG 0.505610 2_3:+47201907 Msa0295000:CDS
ATCCTTGCAGCAGCAAGCTT+AGG 0.506123 2_3:+47206689 Msa0295000:CDS
GCACCAACAGCAGCAGCATA+AGG 0.509999 2_3:-47202021 None:intergenic
ATTGTAAATCGCCTATCCAT+AGG 0.510888 2_3:-47201481 None:intergenic
AGAAGCCATTCAGAAGATGC+AGG 0.511885 2_3:+47205173 Msa0295000:CDS
CCGAATACTGGGAGGAGTAA+GGG 0.512021 2_3:+47201863 Msa0295000:CDS
ATACTATGGGTATGGACAGC+CGG 0.512029 2_3:+47206038 Msa0295000:CDS
TGGAGTGCATACTATGGGTA+TGG 0.512551 2_3:+47206030 Msa0295000:CDS
CTGGTGGAACTATATTCACT+GGG 0.513945 2_3:-47204678 None:intergenic
AAATGGTTCTAGGACGTACC+TGG 0.515634 2_3:+47205976 Msa0295000:intron
ATCTAAATTGTCAAAATCAA+AGG 0.516322 2_3:-47206911 None:intergenic
AGCTTGCTGCTGCAAGGATG+AGG 0.516585 2_3:-47206685 None:intergenic
TGTGCCTACCTTGGAACAAA+GGG 0.518894 2_3:+47206264 Msa0295000:CDS
TGAGAGGAATCGGGCTATGT+CGG 0.521570 2_3:+47201916 Msa0295000:CDS
AGTAAATAATCCGTAACATC+CGG 0.522797 2_3:-47201782 None:intergenic
ACCCACAAATATCGAATGAT+CGG 0.525158 2_3:-47201750 None:intergenic
CAACTCTTCCCTTTGTTCCA+AGG 0.526046 2_3:-47206272 None:intergenic
TACTATGGGTATGGACAGCC+GGG 0.528661 2_3:+47206039 Msa0295000:CDS
ACTCATTATGGGAGTGTTCG+TGG 0.529143 2_3:+47201821 Msa0295000:CDS
ACAATAGGAATTTAAACCTA+AGG 0.531870 2_3:-47206788 None:intergenic
TCTTCCCTTTGTTCCAAGGT+AGG 0.532246 2_3:-47206268 None:intergenic
TAGGCCCCAAACAGCTAGAC+AGG 0.532303 2_3:+47205236 Msa0295000:CDS
CGGGCTATGTCGGAGATGAA+TGG 0.532900 2_3:+47201926 Msa0295000:CDS
CTTCTTCGAGGGATGCTGGT+TGG 0.533486 2_3:-47201451 None:intergenic
AGCTATGTCTGTGCCTACCT+TGG 0.534806 2_3:+47206255 Msa0295000:CDS
ACAAACCTTCCGTTTAAACT+GGG 0.535255 2_3:+47201688 Msa0295000:CDS
AACAGGTGGATCAAAGTCAA+TGG 0.535631 2_3:+47206010 Msa0295000:CDS
GGAAGCCCAGTTTAAACGGA+AGG 0.536078 2_3:-47201693 None:intergenic
TACAACGGCACTCAAATGCC+TGG 0.539720 2_3:+47201659 Msa0295000:CDS
GTCAATGGAGTGCATACTAT+GGG 0.545165 2_3:+47206025 Msa0295000:CDS
TTGTGACTGATCCGAATACT+GGG 0.547682 2_3:+47201852 Msa0295000:CDS
ATAGGGTTCGAACTTCTTCG+AGG 0.549325 2_3:-47201463 None:intergenic
CTGTGCCTACCTTGGAACAA+AGG 0.550340 2_3:+47206263 Msa0295000:CDS
ATTTGTGGGTGATTTGGCTC+CGG 0.555387 2_3:+47201763 Msa0295000:CDS
ATCCTAAGCTTGCTGCTGCA+AGG 0.556106 2_3:-47206691 None:intergenic
ACTGGGAGGAGTAAGGGGTA+TGG 0.556936 2_3:+47201869 Msa0295000:CDS
GGCAGCAATATATCCAGTGC+CGG 0.557073 2_3:+47204645 Msa0295000:intron
CCCACAAATATCGAATGATC+GGG 0.557696 2_3:-47201749 None:intergenic
TTGTTTACATCGTATTCTGG+TGG 0.561644 2_3:-47204694 None:intergenic
ATCATCCGCAACAAAATCAC+CGG 0.568521 2_3:+47201569 Msa0295000:CDS
GAAGTTCGAACCCTATGGAT+AGG 0.569963 2_3:+47201470 Msa0295000:CDS
CTGATAATTAACTCATTGTG+GGG 0.570175 2_3:+47207007 Msa0295000:three_prime_UTR
TGGAGGATGGGGACAACAGG+TGG 0.570788 2_3:+47205996 Msa0295000:CDS
GCTGCTGCAAGGATGAGGAA+TGG 0.571044 2_3:-47206680 None:intergenic
GGGAAATTACTTATCAACAT+CGG 0.572190 2_3:-47206314 None:intergenic
GGAGATGACTTCGCCGGTGT+GGG 0.574880 2_3:-47201540 None:intergenic
TTGTAAATCGCCTATCCATA+GGG 0.576708 2_3:-47201480 None:intergenic
CATATCTTTACACCGGCTAA+CGG 0.579170 2_3:-47206845 None:intergenic
CACTTATCAGCTCATAAATG+AGG 0.581858 2_3:-47206966 None:intergenic
AATTTAGCGATGAGAGTGAG+AGG 0.585717 2_3:+47201900 Msa0295000:CDS
CGAATACTGGGAGGAGTAAG+GGG 0.590206 2_3:+47201864 Msa0295000:CDS
ACGTGTCTATTGTTTGGCAT+AGG 0.590730 2_3:+47206935 Msa0295000:three_prime_UTR
GGGGCCTACCCCAAGAAACT+CGG 0.596781 2_3:-47205221 None:intergenic
TAGGACGTACCTGGAGGATG+GGG 0.597591 2_3:+47205985 Msa0295000:intron
GAACGCGTTCGGCGGCAGAG+TGG 0.602194 2_3:-47201628 None:intergenic
TAGGGTTCGAACTTCTTCGA+GGG 0.602408 2_3:-47201462 None:intergenic
TGGAGATGACTTCGCCGGTG+TGG 0.604188 2_3:-47201541 None:intergenic
AATGATCGGGACCCGCATCA+GGG 0.607645 2_3:-47201736 None:intergenic
TGGGAGTGTTCGTGGTGCGA+AGG 0.608528 2_3:+47201829 Msa0295000:CDS
CAAATGATCCGAGTTTCTTG+GGG 0.616070 2_3:+47205213 Msa0295000:CDS
GGATCTTAATGTCTCAGAGG+AGG 0.616641 2_3:+47204813 Msa0295000:CDS
GTTCATCCCGGCAAAGCATG+TGG 0.617595 2_3:+47204883 Msa0295000:CDS
GATAGGCGATTTACAATACT+GGG 0.619711 2_3:+47201487 Msa0295000:CDS
GTGTCTGTCAAAGTTCATCC+CGG 0.622798 2_3:+47204871 Msa0295000:CDS
TACTTGTCATATCTTTACAC+CGG 0.624826 2_3:-47206852 None:intergenic
TGATCCGAGTTTCTTGGGGT+AGG 0.628330 2_3:+47205217 Msa0295000:CDS
GCCCTAAAATGGCATTTCCG+TGG 0.628522 2_3:-47206638 None:intergenic
GCTGCATATCTCTCAGTCCA+CGG 0.628742 2_3:+47206621 Msa0295000:CDS
GAAGCCATTCAGAAGATGCA+GGG 0.631248 2_3:+47205174 Msa0295000:CDS
TTATGAAGCTTATGCATATG+GGG 0.631339 2_3:+47206062 Msa0295000:CDS
AAAATCACCGGTCAACCAGA+AGG 0.635000 2_3:+47201581 Msa0295000:CDS
GCGGCGTTCACCGATACCAA+AGG 0.642957 2_3:-47201714 None:intergenic
TATGCATAAGCTTCATAACC+CGG 0.644180 2_3:-47206057 None:intergenic
TTTGATGGAGATGACTTCGC+CGG 0.645530 2_3:-47201546 None:intergenic
CGCGTTCTTCAAACCTACAA+CGG 0.646772 2_3:+47201644 Msa0295000:CDS
AATACCTGTCTAGCTGTTTG+GGG 0.652016 2_3:-47205240 None:intergenic
TCAACATCGGGCATTGCCAG+AGG 0.653213 2_3:-47206301 None:intergenic
ACACACTGCTTCTCCCACAC+CGG 0.659459 2_3:+47201527 Msa0295000:CDS
ATATATTGAAACATAAAACC+AGG 0.661697 2_3:-47206732 None:intergenic
TTTGGATCTTAATGTCTCAG+AGG 0.664207 2_3:+47204810 Msa0295000:CDS
GGTTTGAAGAACGCGTTCGG+CGG 0.681527 2_3:-47201636 None:intergenic
TGGAACTATATTCACTGGGG+CGG 0.686340 2_3:-47204674 None:intergenic
GTTTGATCCCCAAATCCCAG+TGG 0.694172 2_3:+47206809 Msa0295000:three_prime_UTR
GATCGGGACCCGCATCAGGG+CGG 0.708758 2_3:-47201733 None:intergenic
TGGTTCTAGGACGTACCTGG+AGG 0.726254 2_3:+47205979 Msa0295000:intron
TGACTGATCCGAATACTGGG+AGG 0.766798 2_3:+47201855 Msa0295000:CDS
TGGTGGAACTATATTCACTG+GGG 0.789434 2_3:-47204677 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATTATATTATTAATTA+AGG - chr2_3:47203199-47203218 None:intergenic 0.0%
!! GTGTTTATTTATAAATTATT+GGG + chr2_3:47202182-47202201 Msa0295000:intron 10.0%
!!! TAACAATATTTGAAATTTAA+AGG - chr2_3:47204482-47204501 None:intergenic 10.0%
!!! TTTTATAATTAGGATATGTT+TGG + chr2_3:47202109-47202128 Msa0295000:intron 15.0%
!! GGTGTTTATTTATAAATTAT+TGG + chr2_3:47202181-47202200 Msa0295000:intron 15.0%
!!! GTCATTTTTATAAGTAATTT+TGG + chr2_3:47202303-47202322 Msa0295000:intron 15.0%
!!! TCTTTTTCGTTATTAATTTT+GGG - chr2_3:47202388-47202407 None:intergenic 15.0%
!! CTTATATGAAAACAATTTAT+AGG - chr2_3:47202513-47202532 None:intergenic 15.0%
!! CTTATATATAAGCTTAATAT+AGG - chr2_3:47203454-47203473 None:intergenic 15.0%
!! TTATGGAAATAAAATGAAAT+TGG + chr2_3:47203767-47203786 Msa0295000:intron 15.0%
!! TGAAATAAGAAAAAATAGAA+TGG - chr2_3:47204386-47204405 None:intergenic 15.0%
!! TGAAAATTTCAAAAATGTTA+CGG - chr2_3:47204740-47204759 None:intergenic 15.0%
!!! TTTATTGATAATTCGAATTT+AGG + chr2_3:47205748-47205767 Msa0295000:intron 15.0%
!! TATATTTGCACTAATAAATT+TGG + chr2_3:47205949-47205968 Msa0295000:intron 15.0%
!! TTTAAATTTACATATTGCAT+TGG + chr2_3:47206164-47206183 Msa0295000:intron 15.0%
!! TAAATATGAGATTTAAATCT+GGG - chr2_3:47206444-47206463 None:intergenic 15.0%
!!! CCTAATTATAAAAAAGTGTA+GGG - chr2_3:47202102-47202121 None:intergenic 20.0%
!!! TCCTAATTATAAAAAAGTGT+AGG - chr2_3:47202103-47202122 None:intergenic 20.0%
!!! CTTTTTCGTTATTAATTTTG+GGG - chr2_3:47202387-47202406 None:intergenic 20.0%
!!! GTCTTTTTCGTTATTAATTT+TGG - chr2_3:47202389-47202408 None:intergenic 20.0%
!!! TTCATTTTGACTGTAAAAAA+AGG - chr2_3:47203047-47203066 None:intergenic 20.0%
!!! GTTATTTTTATATGCTATCT+TGG + chr2_3:47203739-47203758 Msa0295000:intron 20.0%
!!! AATAAAATGAAATTGGCTTA+TGG + chr2_3:47203774-47203793 Msa0295000:intron 20.0%
!! TTTACTTTATACTAGTAGAT+AGG + chr2_3:47203846-47203865 Msa0295000:intron 20.0%
!! AAAATATGATAGAATCAGAA+TGG + chr2_3:47204165-47204184 Msa0295000:intron 20.0%
!!! TATTTTTCTTGTACCTATAT+GGG + chr2_3:47204232-47204251 Msa0295000:intron 20.0%
!!! ATTTTGATTTAGTACAACTT+AGG + chr2_3:47204597-47204616 Msa0295000:intron 20.0%
!!! TTTGAAATTTTCATTTCCTA+TGG + chr2_3:47204747-47204766 Msa0295000:intron 20.0%
!! ACATTCACATAATAGAATTA+AGG - chr2_3:47205108-47205127 None:intergenic 20.0%
!!! AGGTATTTTTTCTTTAGAAA+TGG + chr2_3:47205256-47205275 Msa0295000:intron 20.0%
!! GTTAAAAACCTAAACAAATA+TGG - chr2_3:47205387-47205406 None:intergenic 20.0%
!!! TTTGTTTAGGTTTTTAACAT+AGG + chr2_3:47205389-47205408 Msa0295000:intron 20.0%
!! AGCATAACAATACATAAAAA+GGG - chr2_3:47205454-47205473 None:intergenic 20.0%
!! AAGCATAACAATACATAAAA+AGG - chr2_3:47205455-47205474 None:intergenic 20.0%
!!! ACAATAGATATGTATTGATA+TGG + chr2_3:47205709-47205728 Msa0295000:intron 20.0%
!!! TTAGATAAAGTTTGTTATGA+TGG - chr2_3:47205845-47205864 None:intergenic 20.0%
!!! CTAATAAATTTGGTTCTAAA+TGG + chr2_3:47205959-47205978 Msa0295000:intron 20.0%
!! CTAAATATGAGATTTAAATC+TGG - chr2_3:47206445-47206464 None:intergenic 20.0%
!! ATATATTGAAACATAAAACC+AGG - chr2_3:47206735-47206754 None:intergenic 20.0%
!! ATCTAAATTGTCAAAATCAA+AGG - chr2_3:47206914-47206933 None:intergenic 20.0%
!! ATTTACTACAAGAGACTTTT+AGG + chr2_3:47201798-47201817 Msa0295000:CDS 25.0%
!!! CCCTACACTTTTTTATAATT+AGG + chr2_3:47202099-47202118 Msa0295000:intron 25.0%
! TTTATTTCCAGAAGTTATCT+AGG - chr2_3:47202558-47202577 None:intergenic 25.0%
!! TTCTGGAAATAAAGTGAAAT+TGG + chr2_3:47202565-47202584 Msa0295000:intron 25.0%
!!! TCAATTCAAACAACCTTTTT+TGG + chr2_3:47202672-47202691 Msa0295000:intron 25.0%
!!! CAATTCAAACAACCTTTTTT+GGG + chr2_3:47202673-47202692 Msa0295000:intron 25.0%
! AGTGCTTATGTATAAGTTAT+TGG + chr2_3:47202744-47202763 Msa0295000:intron 25.0%
! GTGCTTATGTATAAGTTATT+GGG + chr2_3:47202745-47202764 Msa0295000:intron 25.0%
!! GTCTCTTTTATAAGTCATTT+TGG + chr2_3:47202290-47202309 Msa0295000:intron 25.0%
!! CTCTTCTGTTAGTAATTTTA+TGG - chr2_3:47203574-47203593 None:intergenic 25.0%
! ACACATTGCATTGAAAATTA+GGG - chr2_3:47203895-47203914 None:intergenic 25.0%
! AACACATTGCATTGAAAATT+AGG - chr2_3:47203896-47203915 None:intergenic 25.0%
!! ATATAGTTTGTACTTGTGAA+TGG + chr2_3:47204036-47204055 Msa0295000:intron 25.0%
!! TATAGTTTGTACTTGTGAAT+GGG + chr2_3:47204037-47204056 Msa0295000:intron 25.0%
! TACAAGAAAAATAGAGAAAC+GGG - chr2_3:47204225-47204244 None:intergenic 25.0%
! GTACAAGAAAAATAGAGAAA+CGG - chr2_3:47204226-47204245 None:intergenic 25.0%
!!! CTATTTTTCTTGTACCTATA+TGG + chr2_3:47204231-47204250 Msa0295000:intron 25.0%
!! TTTCAACTTTTCCTTTGTAT+AGG + chr2_3:47204328-47204347 Msa0295000:intron 25.0%
!! AGTTGAAACTTTGATCTTTT+TGG + chr2_3:47204565-47204584 Msa0295000:intron 25.0%
! ATACTTATCTATGATTTCCT+TGG + chr2_3:47204624-47204643 Msa0295000:intron 25.0%
!! AAGCAAAACTTTTTGCAATT+TGG + chr2_3:47204841-47204860 Msa0295000:CDS 25.0%
!! TATGTAGAAGTTTGTTTGTT+AGG + chr2_3:47205476-47205495 Msa0295000:intron 25.0%
! TAATGGTTAAAGACTAAAAC+AGG + chr2_3:47205618-47205637 Msa0295000:intron 25.0%
!! ATAGATATGTATTGATATGG+AGG + chr2_3:47205712-47205731 Msa0295000:intron 25.0%
! ATTATATAACTTACCTGTTG+CGG - chr2_3:47206144-47206163 None:intergenic 25.0%
! CATGTTATAAAAAGAAAGGA+GGG - chr2_3:47206337-47206356 None:intergenic 25.0%
!! CTCCTTTCTTTTTATAACAT+GGG + chr2_3:47206336-47206355 Msa0295000:intron 25.0%
! ACAATAGGAATTTAAACCTA+AGG - chr2_3:47206791-47206810 None:intergenic 25.0%
!!! CTGATAAGTGTTGATTTAAA+TGG + chr2_3:47206979-47206998 Msa0295000:three_prime_UTR 25.0%
! AACTGATAATTAACTCATTG+TGG + chr2_3:47207005-47207024 Msa0295000:three_prime_UTR 25.0%
AGTAAATAATCCGTAACATC+CGG - chr2_3:47201785-47201804 None:intergenic 30.0%
!!! AGACTTTTAGGACTCATTAT+GGG + chr2_3:47201810-47201829 Msa0295000:CDS 30.0%
! TTTGTTATACCTTTAGGAAC+AGG - chr2_3:47202078-47202097 None:intergenic 30.0%
TTTGCAATTCGATGCATTTA+GGG + chr2_3:47202418-47202437 Msa0295000:intron 30.0%
AACTTATCCTAGATAACTTC+TGG + chr2_3:47202548-47202567 Msa0295000:intron 30.0%
! AATAAAGTGAAATTGGCTCA+TGG + chr2_3:47202572-47202591 Msa0295000:intron 30.0%
TTAAACTTACTGCCCAAAAA+AGG - chr2_3:47202688-47202707 None:intergenic 30.0%
!!! CAAACCACTATTTAGTTTTG+TGG + chr2_3:47202768-47202787 Msa0295000:intron 30.0%
ACTTCCACAAAACTAAATAG+TGG - chr2_3:47202775-47202794 None:intergenic 30.0%
AGTGTAATTCATTGTCACAT+TGG + chr2_3:47202792-47202811 Msa0295000:intron 30.0%
TTGCAATTTCGATACATTCA+GGG - chr2_3:47202256-47202275 None:intergenic 30.0%
TTTGCAATTTCGATACATTC+AGG - chr2_3:47202257-47202276 None:intergenic 30.0%
!! GTTGTTTTCATAAGCTATCT+TGG - chr2_3:47203388-47203407 None:intergenic 30.0%
TGACAAACGAAAAACGTAAT+TGG - chr2_3:47203544-47203563 None:intergenic 30.0%
ATTACTAACAGAAGAGACAA+TGG + chr2_3:47203578-47203597 Msa0295000:intron 30.0%
TTACTAACAGAAGAGACAAT+GGG + chr2_3:47203579-47203598 Msa0295000:intron 30.0%
TTTGCGATTTCGATACATTT+AGG + chr2_3:47203608-47203627 Msa0295000:intron 30.0%
TTGCGATTTCGATACATTTA+GGG + chr2_3:47203609-47203628 Msa0295000:intron 30.0%
! TTACAGCAAAACAACCATTT+TGG - chr2_3:47203665-47203684 None:intergenic 30.0%
ATGCTATCTTGGATAACTTA+TGG + chr2_3:47203750-47203769 Msa0295000:intron 30.0%
TCTTTCAAACAAACTCACAA+GGG + chr2_3:47203823-47203842 Msa0295000:intron 30.0%
CATTGAAAATTAGGGCTATT+TGG - chr2_3:47203887-47203906 None:intergenic 30.0%
GTAAGAAAATTGTACATGAC+CGG + chr2_3:47204006-47204025 Msa0295000:intron 30.0%
AGAATCAGAATGGTATGTAA+AGG + chr2_3:47204175-47204194 Msa0295000:intron 30.0%
GAGAAGTGAATGTAATTGTA+AGG - chr2_3:47204289-47204308 None:intergenic 30.0%
!!! ATGCAAATTTTAGAACCTCA+AGG - chr2_3:47204427-47204446 None:intergenic 30.0%
TTTAAAGGATTGCATAACCT+TGG - chr2_3:47204467-47204486 None:intergenic 30.0%
GTATTGTTTACATCGTATTC+TGG - chr2_3:47204700-47204719 None:intergenic 30.0%
TTTGCAATGCAGATTTATGT+TGG + chr2_3:47204784-47204803 Msa0295000:intron 30.0%
!! GCAGATTTATGTTGGTAATT+TGG + chr2_3:47204792-47204811 Msa0295000:intron 30.0%
!!! CATGTGGTTTTGTTCAATTT+GGG + chr2_3:47204899-47204918 Msa0295000:CDS 30.0%
!!! ATGTGGTTTTGTTCAATTTG+GGG + chr2_3:47204900-47204919 Msa0295000:CDS 30.0%
TGCTTAAAAAGAGATTAGAG+AGG - chr2_3:47204940-47204959 None:intergenic 30.0%
TGAAACTTATTTCCTTTGAG+AGG - chr2_3:47205031-47205050 None:intergenic 30.0%
TCAAGATGCATGGTAAATTA+GGG - chr2_3:47205059-47205078 None:intergenic 30.0%
GTAAAAATACTCAAGATGCA+TGG - chr2_3:47205069-47205088 None:intergenic 30.0%
! ATTGATAACACAAATGCACA+AGG - chr2_3:47205313-47205332 None:intergenic 30.0%
CAAATCGTCCATATTTGTTT+AGG + chr2_3:47205376-47205395 Msa0295000:intron 30.0%
ATCTTGAAATTGTGAAGGTT+TGG + chr2_3:47205540-47205559 Msa0295000:intron 30.0%
!! TTAAGTATTGACCCATGTAA+GGG - chr2_3:47205601-47205620 None:intergenic 30.0%
!! ATTAAGTATTGACCCATGTA+AGG - chr2_3:47205602-47205621 None:intergenic 30.0%
TTACATGGGTCAATACTTAA+TGG + chr2_3:47205601-47205620 Msa0295000:intron 30.0%
TATCTATACATATGACTCCT+GGG - chr2_3:47205653-47205672 None:intergenic 30.0%
ATATCTATACATATGACTCC+TGG - chr2_3:47205654-47205673 None:intergenic 30.0%
AGGAGTCATATGTATAGATA+TGG + chr2_3:47205653-47205672 Msa0295000:intron 30.0%
TGTATAGATATGGTTGTTGA+AGG + chr2_3:47205663-47205682 Msa0295000:intron 30.0%
TGATAATTCGAATTTAGGCT+TGG + chr2_3:47205753-47205772 Msa0295000:intron 30.0%
AAGTTTGTAGTTATCACAAG+GGG - chr2_3:47205822-47205841 None:intergenic 30.0%
GAAGTTTGTAGTTATCACAA+GGG - chr2_3:47205823-47205842 None:intergenic 30.0%
!! ATTTGGTTCTAAATGGTTCT+AGG + chr2_3:47205966-47205985 Msa0295000:intron 30.0%
GTTATGAAGCTTATGCATAT+GGG + chr2_3:47206061-47206080 Msa0295000:CDS 30.0%
TTATGAAGCTTATGCATATG+GGG + chr2_3:47206062-47206081 Msa0295000:CDS 30.0%
TTATATAACTTACCTGTTGC+GGG - chr2_3:47206143-47206162 None:intergenic 30.0%
!! ATTGCATTGGTTCATATTGA+AGG + chr2_3:47206177-47206196 Msa0295000:intron 30.0%
!! TTGCATTGGTTCATATTGAA+GGG + chr2_3:47206178-47206197 Msa0295000:intron 30.0%
GGAAATTACTTATCAACATC+GGG - chr2_3:47206316-47206335 None:intergenic 30.0%
GGGAAATTACTTATCAACAT+CGG - chr2_3:47206317-47206336 None:intergenic 30.0%
CCATGTTATAAAAAGAAAGG+AGG - chr2_3:47206338-47206357 None:intergenic 30.0%
! CCTCCTTTCTTTTTATAACA+TGG + chr2_3:47206335-47206354 Msa0295000:intron 30.0%
CTCCCATGTTATAAAAAGAA+AGG - chr2_3:47206341-47206360 None:intergenic 30.0%
AATGCACATGAAGTCAATAT+GGG - chr2_3:47206566-47206585 None:intergenic 30.0%
AAATGCACATGAAGTCAATA+TGG - chr2_3:47206567-47206586 None:intergenic 30.0%
CTATTTGTATTTGTACTTCC+TGG + chr2_3:47206714-47206733 Msa0295000:three_prime_UTR 30.0%
! AACATAACTTAAGTTGCCTT+AGG + chr2_3:47206772-47206791 Msa0295000:three_prime_UTR 30.0%
TACTTGTCATATCTTTACAC+CGG - chr2_3:47206855-47206874 None:intergenic 30.0%
TAGATAACGTGTCTATTGTT+TGG + chr2_3:47206929-47206948 Msa0295000:three_prime_UTR 30.0%
TTGTAAATCGCCTATCCATA+GGG - chr2_3:47201483-47201502 None:intergenic 35.0%
ATTGTAAATCGCCTATCCAT+AGG - chr2_3:47201484-47201503 None:intergenic 35.0%
GATAGGCGATTTACAATACT+GGG + chr2_3:47201487-47201506 Msa0295000:CDS 35.0%
! TTTGTTGCGGATGATTTTGA+TGG - chr2_3:47201564-47201583 None:intergenic 35.0%
! GTTTAAACGGAAGGTTTGTT+CGG - chr2_3:47201687-47201706 None:intergenic 35.0%
AACAAACCTTCCGTTTAAAC+TGG + chr2_3:47201687-47201706 Msa0295000:CDS 35.0%
ACAAACCTTCCGTTTAAACT+GGG + chr2_3:47201688-47201707 Msa0295000:CDS 35.0%
ACCCACAAATATCGAATGAT+CGG - chr2_3:47201753-47201772 None:intergenic 35.0%
TTCGATATTTGTGGGTGATT+TGG + chr2_3:47201757-47201776 Msa0295000:CDS 35.0%
!!! GAGACTTTTAGGACTCATTA+TGG + chr2_3:47201809-47201828 Msa0295000:CDS 35.0%
ATTGTTCTACTAGACCTATG+AGG + chr2_3:47201954-47201973 Msa0295000:intron 35.0%
! ATAAGGATTTTGCTGATACC+CGG - chr2_3:47202007-47202026 None:intergenic 35.0%
!! TAGGGCTTTGTTATACCTTT+AGG - chr2_3:47202084-47202103 None:intergenic 35.0%
AGCATAAGTGTTTACACTGT+TGG + chr2_3:47202160-47202179 Msa0295000:intron 35.0%
!! AGTGTAACTTGCTGTAACAT+TGG + chr2_3:47202229-47202248 Msa0295000:intron 35.0%
GGTTCTCAGAATATGTTGTT+AGG + chr2_3:47202324-47202343 Msa0295000:intron 35.0%
AGTCAACAGAATCTGTTCTT+AGG + chr2_3:47202348-47202367 Msa0295000:intron 35.0%
GTTTGCAATTCGATGCATTT+AGG + chr2_3:47202417-47202436 Msa0295000:intron 35.0%
TTGCAATTCGATGCATTTAG+GGG + chr2_3:47202419-47202438 Msa0295000:intron 35.0%
! TTGTGGCAAATCAACCATTT+TGG - chr2_3:47202476-47202495 None:intergenic 35.0%
!! AAAATGGTTGATTTGCCACA+AGG + chr2_3:47202475-47202494 Msa0295000:intron 35.0%
AGGTTATCTAGATTACCTTG+TGG - chr2_3:47202493-47202512 None:intergenic 35.0%
TTGGAAGGGTTTATGTTCTT+AGG + chr2_3:47202635-47202654 Msa0295000:intron 35.0%
! AGAACAGAGATGAGATTTTG+TGG - chr2_3:47203013-47203032 None:intergenic 35.0%
GATTAGAGATCTAGAGATCT+AGG + chr2_3:47203080-47203099 Msa0295000:intron 35.0%
AACAAGCTGCTTATCCAAAT+AGG + chr2_3:47203510-47203529 Msa0295000:intron 35.0%
ACAAGCTGCTTATCCAAATA+GGG + chr2_3:47203511-47203530 Msa0295000:intron 35.0%
TACTAACAGAAGAGACAATG+GGG + chr2_3:47203580-47203599 Msa0295000:intron 35.0%
CTCTTTCAAACAAACTCACA+AGG + chr2_3:47203822-47203841 Msa0295000:intron 35.0%
TGTTATGGTCATAACTCACA+AGG - chr2_3:47203930-47203949 None:intergenic 35.0%
!! TAGAGCGTTGTTGAATGTTA+TGG - chr2_3:47203945-47203964 None:intergenic 35.0%
TACAAACTATATAGTGACGC+CGG - chr2_3:47204028-47204047 None:intergenic 35.0%
! CGGCAAATTTTCAATCAAAC+AGG - chr2_3:47204097-47204116 None:intergenic 35.0%
CATTCCATCAATCATCAACA+CGG - chr2_3:47204117-47204136 None:intergenic 35.0%
AGAAAAATAGAGAAACGGGA+CGG - chr2_3:47204221-47204240 None:intergenic 35.0%
GTACCTATATGGGTTTAAGA+TGG + chr2_3:47204242-47204261 Msa0295000:intron 35.0%
GTTCCATCTTAAACCCATAT+AGG - chr2_3:47204248-47204267 None:intergenic 35.0%
TACATTCACTTCTCGAACTT+TGG + chr2_3:47204295-47204314 Msa0295000:intron 35.0%
! ACTTTTCCTTTGTATAGGCA+TGG + chr2_3:47204333-47204352 Msa0295000:intron 35.0%
AACATACCATGCCTATACAA+AGG - chr2_3:47204342-47204361 None:intergenic 35.0%
TTGTTTACATCGTATTCTGG+TGG - chr2_3:47204697-47204716 None:intergenic 35.0%
TTCAAAAATGTTACGGCTAC+AGG - chr2_3:47204733-47204752 None:intergenic 35.0%
!! AAAGTATGTAAGAGCACCAT+AGG - chr2_3:47204766-47204785 None:intergenic 35.0%
TTTGGATCTTAATGTCTCAG+AGG + chr2_3:47204810-47204829 Msa0295000:CDS 35.0%
!!! GCATGTGGTTTTGTTCAATT+TGG + chr2_3:47204898-47204917 Msa0295000:CDS 35.0%
TTTGATATGTTGCCTCTCAA+AGG + chr2_3:47205016-47205035 Msa0295000:intron 35.0%
CAAAGGAAATAAGTTTCACG+TGG + chr2_3:47205033-47205052 Msa0295000:intron 35.0%
CTCAAGATGCATGGTAAATT+AGG - chr2_3:47205060-47205079 None:intergenic 35.0%
AAGATGCAGGGAAAGATATT+AGG + chr2_3:47205186-47205205 Msa0295000:CDS 35.0%
AACAAATGATCCGAGTTTCT+TGG + chr2_3:47205211-47205230 Msa0295000:CDS 35.0%
ACAAATGATCCGAGTTTCTT+GGG + chr2_3:47205212-47205231 Msa0295000:CDS 35.0%
AAATACCTGTCTAGCTGTTT+GGG - chr2_3:47205244-47205263 None:intergenic 35.0%
AAAATACCTGTCTAGCTGTT+TGG - chr2_3:47205245-47205264 None:intergenic 35.0%
TTTAACATAGGACCCATACA+TGG + chr2_3:47205401-47205420 Msa0295000:intron 35.0%
TTAACATAGGACCCATACAT+GGG + chr2_3:47205402-47205421 Msa0295000:intron 35.0%
TAGAATAGAACCCCATGTAT+GGG - chr2_3:47205416-47205435 None:intergenic 35.0%
! TTTGTTTGTTAGGACATGTG+TGG + chr2_3:47205486-47205505 Msa0295000:intron 35.0%
GAGCAATCTTGAAATTGTGA+AGG + chr2_3:47205535-47205554 Msa0295000:intron 35.0%
AAAACAGGAAATGATATCCC+AGG + chr2_3:47205633-47205652 Msa0295000:intron 35.0%
GGAAGTTTGTAGTTATCACA+AGG - chr2_3:47205824-47205843 None:intergenic 35.0%
TATGCATAAGCTTCATAACC+CGG - chr2_3:47206060-47206079 None:intergenic 35.0%
GGTTATGAAGCTTATGCATA+TGG + chr2_3:47206060-47206079 Msa0295000:CDS 35.0%
ATCTGACTACTTATGTTCGT+AGG + chr2_3:47206210-47206229 Msa0295000:intron 35.0%
! TACTTATGTTCGTAGGTTGA+AGG + chr2_3:47206217-47206236 Msa0295000:intron 35.0%
AACTGAACACGAGATATTGA+CGG + chr2_3:47206367-47206386 Msa0295000:intron 35.0%
ATAGACCATCCGATCTAAAT+CGG + chr2_3:47206497-47206516 Msa0295000:intron 35.0%
ATTACATGCAATCATGCAGT+CGG - chr2_3:47206537-47206556 None:intergenic 35.0%
CACTTATCAGCTCATAAATG+AGG - chr2_3:47206969-47206988 None:intergenic 35.0%
GGATAGGCGATTTACAATAC+TGG + chr2_3:47201486-47201505 Msa0295000:CDS 40.0%
ATCATCCGCAACAAAATCAC+CGG + chr2_3:47201569-47201588 Msa0295000:CDS 40.0%
TCGATGAAACCATAACCTTC+TGG - chr2_3:47201599-47201618 None:intergenic 40.0%
CAAAGGAAGCCCAGTTTAAA+CGG - chr2_3:47201700-47201719 None:intergenic 40.0%
TCCCGATCATTCGATATTTG+TGG + chr2_3:47201748-47201767 Msa0295000:CDS 40.0%
CCCACAAATATCGAATGATC+GGG - chr2_3:47201752-47201771 None:intergenic 40.0%
CCCGATCATTCGATATTTGT+GGG + chr2_3:47201749-47201768 Msa0295000:CDS 40.0%
TTGTGACTGATCCGAATACT+GGG + chr2_3:47201852-47201871 Msa0295000:CDS 40.0%
AATTTAGCGATGAGAGTGAG+AGG + chr2_3:47201900-47201919 Msa0295000:CDS 40.0%
! TGATACCCGGTAGTTTTCTT+GGG - chr2_3:47201994-47202013 None:intergenic 40.0%
ACTTCCAGAAACCAAGATAG+CGG - chr2_3:47202212-47202231 None:intergenic 40.0%
! TTTTGGTCCTTGAATGTGTG+AGG - chr2_3:47202459-47202478 None:intergenic 40.0%
CACACATTCAAGGACCAAAA+TGG + chr2_3:47202459-47202478 Msa0295000:intron 40.0%
TTGAAAGAGCTTACGGAATC+AGG - chr2_3:47202609-47202628 None:intergenic 40.0%
AGTCTGCTTGAAAGAGCTTA+CGG - chr2_3:47202616-47202635 None:intergenic 40.0%
TAAGCTCTTTCAAGCAGACT+TGG + chr2_3:47202616-47202635 Msa0295000:intron 40.0%
TCTTTCAAGCAGACTTGGAA+GGG + chr2_3:47202621-47202640 Msa0295000:intron 40.0%
TGGTTCTCGAATCTGTTCTT+AGG + chr2_3:47202871-47202890 Msa0295000:intron 40.0%
GTAGTCTCTGTTGTCAATAG+CGG + chr2_3:47202893-47202912 Msa0295000:intron 40.0%
!! ATTCCGCTTTTGCCTAAACT+CGG - chr2_3:47202956-47202975 None:intergenic 40.0%
TTTCCGCTTTGACAACTATG+AGG + chr2_3:47203280-47203299 Msa0295000:intron 40.0%
CTACCTCATAGTTGTCAAAG+CGG - chr2_3:47203286-47203305 None:intergenic 40.0%
AATTGGCGACTATCCCTATT+TGG - chr2_3:47203527-47203546 None:intergenic 40.0%
! TTTTGGTCCTTGAATGTGTG+AGG - chr2_3:47202459-47202478 None:intergenic 40.0%
CACACATTCAAGGACCAAAA+TGG + chr2_3:47202459-47202478 Msa0295000:intron 40.0%
! TGTACTTGTGAATGGGTTTC+TGG + chr2_3:47204044-47204063 Msa0295000:intron 40.0%
!! TTTGCCGTGTTGATGATTGA+TGG + chr2_3:47204110-47204129 Msa0295000:intron 40.0%
!! CGTGTTGATGATTGATGGAA+TGG + chr2_3:47204115-47204134 Msa0295000:intron 40.0%
!! GATATCCAACTTTAGCCTTG+AGG + chr2_3:47204409-47204428 Msa0295000:intron 40.0%
TAGAACCTCAAGGCTAAAGT+TGG - chr2_3:47204417-47204436 None:intergenic 40.0%
ACCTTGGTAGGGTAAAAAGA+AGG - chr2_3:47204451-47204470 None:intergenic 40.0%
AGGATTGCATAACCTTGGTA+GGG - chr2_3:47204462-47204481 None:intergenic 40.0%
AAGGATTGCATAACCTTGGT+AGG - chr2_3:47204463-47204482 None:intergenic 40.0%
CAAATGCAAGACTTTGTCCT+AGG - chr2_3:47204544-47204563 None:intergenic 40.0%
TGGTGGAACTATATTCACTG+GGG - chr2_3:47204680-47204699 None:intergenic 40.0%
CTGGTGGAACTATATTCACT+GGG - chr2_3:47204681-47204700 None:intergenic 40.0%
TCTGGTGGAACTATATTCAC+TGG - chr2_3:47204682-47204701 None:intergenic 40.0%
AACAAAACCACATGCTTTGC+CGG - chr2_3:47204893-47204912 None:intergenic 40.0%
!! GTTTTGTTCAATTTGGGGCT+AGG + chr2_3:47204905-47204924 Msa0295000:CDS 40.0%
CAAATGATCCGAGTTTCTTG+GGG + chr2_3:47205213-47205232 Msa0295000:CDS 40.0%
AATACCTGTCTAGCTGTTTG+GGG - chr2_3:47205243-47205262 None:intergenic 40.0%
TAACATAGGACCCATACATG+GGG + chr2_3:47205403-47205422 Msa0295000:intron 40.0%
CTAGAATAGAACCCCATGTA+TGG - chr2_3:47205417-47205436 None:intergenic 40.0%
AAGGTTTGGCAACTTGTGAA+TGG + chr2_3:47205554-47205573 Msa0295000:intron 40.0%
AACTTGTGAATGGCCAATGT+GGG + chr2_3:47205564-47205583 Msa0295000:intron 40.0%
ACATTGAGAGACCCTTACAT+GGG + chr2_3:47205587-47205606 Msa0295000:intron 40.0%
AACAGGTGGATCAAAGTCAA+TGG + chr2_3:47206010-47206029 Msa0295000:CDS 40.0%
AGTCAATGGAGTGCATACTA+TGG + chr2_3:47206024-47206043 Msa0295000:CDS 40.0%
GTCAATGGAGTGCATACTAT+GGG + chr2_3:47206025-47206044 Msa0295000:CDS 40.0%
CCAGCATATGCATACATTGA+AGG - chr2_3:47206099-47206118 None:intergenic 40.0%
CCTTCAATGTATGCATATGC+TGG + chr2_3:47206096-47206115 Msa0295000:CDS 40.0%
TATGCATATGCTGGATATGC+TGG + chr2_3:47206105-47206124 Msa0295000:CDS 40.0%
ATTGTATGCAGTCTTGCAGT+CGG + chr2_3:47206396-47206415 Msa0295000:intron 40.0%
! TTTTGCCGTCCGATTTAGAT+CGG - chr2_3:47206509-47206528 None:intergenic 40.0%
TCTAAATCGGACGGCAAAAA+AGG + chr2_3:47206510-47206529 Msa0295000:intron 40.0%
CTAAATCGGACGGCAAAAAA+GGG + chr2_3:47206511-47206530 Msa0295000:intron 40.0%
CTGCATGATTGCATGTAATC+TGG + chr2_3:47206538-47206557 Msa0295000:intron 40.0%
TTAACCTGGCAAAGCAATCA+AGG - chr2_3:47206599-47206618 None:intergenic 40.0%
GAGATATGCAGCATTTAACC+TGG - chr2_3:47206613-47206632 None:intergenic 40.0%
!!! TCCACGGAAATGCCATTTTA+GGG + chr2_3:47206637-47206656 Msa0295000:CDS 40.0%
GGATTTGGGGATCAAACAAT+AGG - chr2_3:47206806-47206825 None:intergenic 40.0%
TGAAAAAGCCACTGGGATTT+GGG - chr2_3:47206820-47206839 None:intergenic 40.0%
ATGAAAAAGCCACTGGGATT+TGG - chr2_3:47206821-47206840 None:intergenic 40.0%
! CATATCTTTACACCGGCTAA+CGG - chr2_3:47206848-47206867 None:intergenic 40.0%
ACGTGTCTATTGTTTGGCAT+AGG + chr2_3:47206935-47206954 Msa0295000:three_prime_UTR 40.0%
TAGGGTTCGAACTTCTTCGA+GGG - chr2_3:47201465-47201484 None:intergenic 45.0%
ATAGGGTTCGAACTTCTTCG+AGG - chr2_3:47201466-47201485 None:intergenic 45.0%
TCGAAGAAGTTCGAACCCTA+TGG + chr2_3:47201465-47201484 Msa0295000:CDS 45.0%
GAAGTTCGAACCCTATGGAT+AGG + chr2_3:47201470-47201489 Msa0295000:CDS 45.0%
TTTGATGGAGATGACTTCGC+CGG - chr2_3:47201549-47201568 None:intergenic 45.0%
! GTTGACCGGTGATTTTGTTG+CGG - chr2_3:47201577-47201596 None:intergenic 45.0%
AAAATCACCGGTCAACCAGA+AGG + chr2_3:47201581-47201600 Msa0295000:CDS 45.0%
! ACCATAACCTTCTGGTTGAC+CGG - chr2_3:47201591-47201610 None:intergenic 45.0%
GTAGGTTTGAAGAACGCGTT+CGG - chr2_3:47201642-47201661 None:intergenic 45.0%
CGCGTTCTTCAAACCTACAA+CGG + chr2_3:47201644-47201663 Msa0295000:CDS 45.0%
CGTTTAAACTGGGCTTCCTT+TGG + chr2_3:47201698-47201717 Msa0295000:CDS 45.0%
AACTGGGCTTCCTTTGGTAT+CGG + chr2_3:47201704-47201723 Msa0295000:CDS 45.0%
! ATTTGTGGGTGATTTGGCTC+CGG + chr2_3:47201763-47201782 Msa0295000:CDS 45.0%
! TGATTTGGCTCCGGATGTTA+CGG + chr2_3:47201772-47201791 Msa0295000:CDS 45.0%
!! ACTCATTATGGGAGTGTTCG+TGG + chr2_3:47201821-47201840 Msa0295000:CDS 45.0%
GTTGTGACTGATCCGAATAC+TGG + chr2_3:47201851-47201870 Msa0295000:CDS 45.0%
GTAGCAGCACTAATCCTCAT+AGG - chr2_3:47201971-47201990 None:intergenic 45.0%
TGCTACCCCAAGAAAACTAC+CGG + chr2_3:47201985-47202004 Msa0295000:intron 45.0%
! GATACCCGGTAGTTTTCTTG+GGG - chr2_3:47201993-47202012 None:intergenic 45.0%
! CTGATACCCGGTAGTTTTCT+TGG - chr2_3:47201995-47202014 None:intergenic 45.0%
AATCCTTATGCTGCTGCTGT+TGG + chr2_3:47202018-47202037 Msa0295000:CDS 45.0%
TATTGGGCAAACCGCTATCT+TGG + chr2_3:47202198-47202217 Msa0295000:intron 45.0%
CAAACCGCTATCTTGGTTTC+TGG + chr2_3:47202205-47202224 Msa0295000:intron 45.0%
TTCAGCACCTCACACATTCA+AGG + chr2_3:47202449-47202468 Msa0295000:intron 45.0%
CTCTTTCAAGCAGACTTGGA+AGG + chr2_3:47202620-47202639 Msa0295000:intron 45.0%
GCGGAAAGCAAAAATTGACG+CGG - chr2_3:47203267-47203286 None:intergenic 45.0%
! GCCTTCTTTTTACCCTACCA+AGG + chr2_3:47204447-47204466 Msa0295000:intron 45.0%
GATGTGACTAGAACCTTCCT+AGG + chr2_3:47204524-47204543 Msa0295000:intron 45.0%
TGCAAGACTTTGTCCTAGGA+AGG - chr2_3:47204540-47204559 None:intergenic 45.0%
CACTGGATATATTGCTGCCA+AGG - chr2_3:47204644-47204663 None:intergenic 45.0%
TGGAACTATATTCACTGGGG+CGG - chr2_3:47204677-47204696 None:intergenic 45.0%
GGATCTTAATGTCTCAGAGG+AGG + chr2_3:47204813-47204832 Msa0295000:CDS 45.0%
GTGTCTGTCAAAGTTCATCC+CGG + chr2_3:47204871-47204890 Msa0295000:CDS 45.0%
ACAAAACCACATGCTTTGCC+GGG - chr2_3:47204892-47204911 None:intergenic 45.0%
AGAAGCCATTCAGAAGATGC+AGG + chr2_3:47205173-47205192 Msa0295000:CDS 45.0%
GAAGCCATTCAGAAGATGCA+GGG + chr2_3:47205174-47205193 Msa0295000:CDS 45.0%
CTTTCCCTGCATCTTCTGAA+TGG - chr2_3:47205181-47205200 None:intergenic 45.0%
CAACTTGTGAATGGCCAATG+TGG + chr2_3:47205563-47205582 Msa0295000:intron 45.0%
GACATTGAGAGACCCTTACA+TGG + chr2_3:47205586-47205605 Msa0295000:intron 45.0%
!! AAATGGTTCTAGGACGTACC+TGG + chr2_3:47205976-47205995 Msa0295000:intron 45.0%
TGGAGTGCATACTATGGGTA+TGG + chr2_3:47206030-47206049 Msa0295000:CDS 45.0%
ATACTATGGGTATGGACAGC+CGG + chr2_3:47206038-47206057 Msa0295000:CDS 45.0%
TGTGCCTACCTTGGAACAAA+GGG + chr2_3:47206264-47206283 Msa0295000:CDS 45.0%
TCTTCCCTTTGTTCCAAGGT+AGG - chr2_3:47206271-47206290 None:intergenic 45.0%
CAACTCTTCCCTTTGTTCCA+AGG - chr2_3:47206275-47206294 None:intergenic 45.0%
GGAAGAGTTGTATGATCCTC+TGG + chr2_3:47206285-47206304 Msa0295000:CDS 45.0%
! ACACGAGATATTGACGGATC+CGG + chr2_3:47206373-47206392 Msa0295000:intron 45.0%
CTGCAAGACTGCATACAATC+CGG - chr2_3:47206395-47206414 None:intergenic 45.0%
GAGATTTAAATCTGGGCCGT+CGG - chr2_3:47206437-47206456 None:intergenic 45.0%
ACCATCCGATCTAAATCGGA+CGG + chr2_3:47206501-47206520 Msa0295000:intron 45.0%
ATGTCCTTGATTGCTTTGCC+AGG + chr2_3:47206592-47206611 Msa0295000:intron 45.0%
!!! GTCCACGGAAATGCCATTTT+AGG + chr2_3:47206636-47206655 Msa0295000:CDS 45.0%
!!! ACGGAAATGCCATTTTAGGG+CGG + chr2_3:47206640-47206659 Msa0295000:CDS 45.0%
GAAAAAGCCACTGGGATTTG+GGG - chr2_3:47206819-47206838 None:intergenic 45.0%
!!! ATCCCAGTGGCTTTTTCATG+TGG + chr2_3:47206822-47206841 Msa0295000:three_prime_UTR 45.0%
! TTTTTCATGTGGCCGTTAGC+CGG + chr2_3:47206833-47206852 Msa0295000:three_prime_UTR 45.0%
ACCGGTCAACCAGAAGGTTA+TGG + chr2_3:47201587-47201606 Msa0295000:CDS 50.0%
! AGGCATTTGAGTGCCGTTGT+AGG - chr2_3:47201660-47201679 None:intergenic 50.0%
TACAACGGCACTCAAATGCC+TGG + chr2_3:47201659-47201678 Msa0295000:CDS 50.0%
GGAAGCCCAGTTTAAACGGA+AGG - chr2_3:47201696-47201715 None:intergenic 50.0%
TGACTGATCCGAATACTGGG+AGG + chr2_3:47201855-47201874 Msa0295000:CDS 50.0%
TCCGAATACTGGGAGGAGTA+AGG + chr2_3:47201862-47201881 Msa0295000:CDS 50.0%
CCCTTACTCCTCCCAGTATT+CGG - chr2_3:47201866-47201885 None:intergenic 50.0%
CCGAATACTGGGAGGAGTAA+GGG + chr2_3:47201863-47201882 Msa0295000:CDS 50.0%
CGAATACTGGGAGGAGTAAG+GGG + chr2_3:47201864-47201883 Msa0295000:CDS 50.0%
GCGATGAGAGTGAGAGGAAT+CGG + chr2_3:47201906-47201925 Msa0295000:CDS 50.0%
CGATGAGAGTGAGAGGAATC+GGG + chr2_3:47201907-47201926 Msa0295000:CDS 50.0%
TGAGAGGAATCGGGCTATGT+CGG + chr2_3:47201916-47201935 Msa0295000:CDS 50.0%
GCTACCCCAAGAAAACTACC+GGG + chr2_3:47201986-47202005 Msa0295000:intron 50.0%
CGACCGAGTTTAGGCAAAAG+CGG + chr2_3:47202950-47202969 Msa0295000:intron 50.0%
AGGCAAAAGCGGAATCAACG+CGG + chr2_3:47202961-47202980 Msa0295000:intron 50.0%
AAGCAAAAATTGACGCGGCG+CGG - chr2_3:47203262-47203281 None:intergenic 50.0%
GGCAGCAATATATCCAGTGC+CGG + chr2_3:47204645-47204664 Msa0295000:intron 50.0%
TGATCCGAGTTTCTTGGGGT+AGG + chr2_3:47205217-47205236 Msa0295000:CDS 50.0%
GGTCTCTCAATGTCCCACAT+TGG - chr2_3:47205580-47205599 None:intergenic 50.0%
TACTATGGGTATGGACAGCC+GGG + chr2_3:47206039-47206058 Msa0295000:CDS 50.0%
TTATGCATATGGGGCTGCTC+AGG + chr2_3:47206071-47206090 Msa0295000:CDS 50.0%
CTATGCACAATACCCGCAAC+AGG + chr2_3:47206128-47206147 Msa0295000:CDS 50.0%
AGCTATGTCTGTGCCTACCT+TGG + chr2_3:47206255-47206274 Msa0295000:CDS 50.0%
CTGTGCCTACCTTGGAACAA+AGG + chr2_3:47206263-47206282 Msa0295000:CDS 50.0%
GCTGCATATCTCTCAGTCCA+CGG + chr2_3:47206621-47206640 Msa0295000:CDS 50.0%
GCCCTAAAATGGCATTTCCG+TGG - chr2_3:47206641-47206660 None:intergenic 50.0%
!! GGAATGGGTTTTGTGCCAGA+GGG - chr2_3:47206667-47206686 None:intergenic 50.0%
!! AGGAATGGGTTTTGTGCCAG+AGG - chr2_3:47206668-47206687 None:intergenic 50.0%
CTGCTGCAAGGATGAGGAAT+GGG - chr2_3:47206682-47206701 None:intergenic 50.0%
ATCCTTGCAGCAGCAAGCTT+AGG + chr2_3:47206689-47206708 Msa0295000:CDS 50.0%
!! ATCCTAAGCTTGCTGCTGCA+AGG - chr2_3:47206694-47206713 None:intergenic 50.0%
GTTTGATCCCCAAATCCCAG+TGG + chr2_3:47206809-47206828 Msa0295000:three_prime_UTR 50.0%
GGCCACATGAAAAAGCCACT+GGG - chr2_3:47206827-47206846 None:intergenic 50.0%
CTTCTTCGAGGGATGCTGGT+TGG - chr2_3:47201454-47201473 None:intergenic 55.0%
CGAACTTCTTCGAGGGATGC+TGG - chr2_3:47201458-47201477 None:intergenic 55.0%
ACACACTGCTTCTCCCACAC+CGG + chr2_3:47201527-47201546 Msa0295000:CDS 55.0%
GGTTTGAAGAACGCGTTCGG+CGG - chr2_3:47201639-47201658 None:intergenic 55.0%
! CGGAAGGTTTGTTCGGTACC+AGG - chr2_3:47201680-47201699 None:intergenic 55.0%
AATGATCGGGACCCGCATCA+GGG - chr2_3:47201739-47201758 None:intergenic 55.0%
ACTGGGAGGAGTAAGGGGTA+TGG + chr2_3:47201869-47201888 Msa0295000:CDS 55.0%
! CTGGGAGGAGTAAGGGGTAT+GGG + chr2_3:47201870-47201889 Msa0295000:CDS 55.0%
CGGGCTATGTCGGAGATGAA+TGG + chr2_3:47201926-47201945 Msa0295000:CDS 55.0%
GCACCAACAGCAGCAGCATA+AGG - chr2_3:47202024-47202043 None:intergenic 55.0%
ACAGGAGCAGCAGCAACAAC+AGG - chr2_3:47202060-47202079 None:intergenic 55.0%
GCTGCTGCTCCTGTTCCTAA+AGG + chr2_3:47202066-47202085 Msa0295000:CDS 55.0%
ACTCGGTCGCGTTCTGACAT+AGG - chr2_3:47202939-47202958 None:intergenic 55.0%
GTCAGAACGCGACCGAGTTT+AGG + chr2_3:47202941-47202960 Msa0295000:intron 55.0%
GGCAAAAGCGGAATCAACGC+GGG + chr2_3:47202962-47202981 Msa0295000:intron 55.0%
GTCAGCGCCTCACACATTCA+AGG + chr2_3:47203638-47203657 Msa0295000:intron 55.0%
GTTCATCCCGGCAAAGCATG+TGG + chr2_3:47204883-47204902 Msa0295000:CDS 55.0%
TAGGCCCCAAACAGCTAGAC+AGG + chr2_3:47205236-47205255 Msa0295000:CDS 55.0%
!! TGGTTCTAGGACGTACCTGG+AGG + chr2_3:47205979-47205998 Msa0295000:intron 55.0%
! TCTAGGACGTACCTGGAGGA+TGG + chr2_3:47205983-47206002 Msa0295000:intron 55.0%
CTAGGACGTACCTGGAGGAT+GGG + chr2_3:47205984-47206003 Msa0295000:intron 55.0%
TAGGACGTACCTGGAGGATG+GGG + chr2_3:47205985-47206004 Msa0295000:intron 55.0%
! TCAACATCGGGCATTGCCAG+AGG - chr2_3:47206304-47206323 None:intergenic 55.0%
GCCGTCCGATTTAGATCGGA+TGG - chr2_3:47206505-47206524 None:intergenic 55.0%
GCTGCTGCAAGGATGAGGAA+TGG - chr2_3:47206683-47206702 None:intergenic 55.0%
!! AGCTTGCTGCTGCAAGGATG+AGG - chr2_3:47206688-47206707 None:intergenic 55.0%
CGGCCACATGAAAAAGCCAC+TGG - chr2_3:47206828-47206847 None:intergenic 55.0%
GGAGATGACTTCGCCGGTGT+GGG - chr2_3:47201543-47201562 None:intergenic 60.0%
TGGAGATGACTTCGCCGGTG+TGG - chr2_3:47201544-47201563 None:intergenic 60.0%
GCGGCGTTCACCGATACCAA+AGG - chr2_3:47201717-47201736 None:intergenic 60.0%
GAATGATCGGGACCCGCATC+AGG - chr2_3:47201740-47201759 None:intergenic 60.0%
!! TGGGAGTGTTCGTGGTGCGA+AGG + chr2_3:47201829-47201848 Msa0295000:CDS 60.0%
! GCGGGCGCTTTTACATGACG+CGG - chr2_3:47203233-47203252 None:intergenic 60.0%
TTCACTGGGGCGGTGTATGC+CGG - chr2_3:47204667-47204686 None:intergenic 60.0%
GGGGCCTACCCCAAGAAACT+CGG - chr2_3:47205224-47205243 None:intergenic 60.0%
ACCTGGAGGATGGGGACAAC+AGG + chr2_3:47205993-47206012 Msa0295000:CDS 60.0%
ACCTGTTGTCCCCATCCTCC+AGG - chr2_3:47205997-47206016 None:intergenic 60.0%
TGGAGGATGGGGACAACAGG+TGG + chr2_3:47205996-47206015 Msa0295000:CDS 60.0%
CCAGAGGGACCGCCCTAAAA+TGG - chr2_3:47206652-47206671 None:intergenic 60.0%
!!! CCATTTTAGGGCGGTCCCTC+TGG + chr2_3:47206649-47206668 Msa0295000:CDS 60.0%
AACGCGTTCGGCGGCAGAGT+GGG - chr2_3:47201630-47201649 None:intergenic 65.0%
GAACGCGTTCGGCGGCAGAG+TGG - chr2_3:47201631-47201650 None:intergenic 70.0%
CGGTGAACGCCGCCCTGATG+CGG + chr2_3:47201724-47201743 Msa0295000:CDS 70.0%
GGTGAACGCCGCCCTGATGC+GGG + chr2_3:47201725-47201744 Msa0295000:CDS 70.0%
GATCGGGACCCGCATCAGGG+CGG - chr2_3:47201736-47201755 None:intergenic 70.0%
TGACGCGGCGCGGTAAGACG+CGG - chr2_3:47203252-47203271 None:intergenic 70.0%
GACGCGGCGCGGTAAGACGC+GGG - chr2_3:47203251-47203270 None:intergenic 75.0%
GGGGCGGTGTATGCCGGCAC+TGG - chr2_3:47204661-47204680 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 47201434 47207028 47201434 ID=Msa0295000;Name=Msa0295000
chr2_3 mRNA 47201434 47207028 47201434 ID=Msa0295000-mRNA-1;Parent=Msa0295000;Name=Msa0295000-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0.85|0.75|1|1|1|8|318|414
chr2_3 exon 47201434 47201949 47201434 ID=Msa0295000-mRNA-1:exon:14740;Parent=Msa0295000-mRNA-1
chr2_3 exon 47202015 47202087 47202015 ID=Msa0295000-mRNA-1:exon:14741;Parent=Msa0295000-mRNA-1
chr2_3 exon 47204650 47204723 47204650 ID=Msa0295000-mRNA-1:exon:14742;Parent=Msa0295000-mRNA-1
chr2_3 exon 47204796 47204926 47204796 ID=Msa0295000-mRNA-1:exon:14743;Parent=Msa0295000-mRNA-1
chr2_3 exon 47205161 47205257 47205161 ID=Msa0295000-mRNA-1:exon:14744;Parent=Msa0295000-mRNA-1
chr2_3 exon 47205988 47206149 47205988 ID=Msa0295000-mRNA-1:exon:14745;Parent=Msa0295000-mRNA-1
chr2_3 exon 47206232 47206326 47206232 ID=Msa0295000-mRNA-1:exon:14746;Parent=Msa0295000-mRNA-1
chr2_3 exon 47206614 47207028 47206614 ID=Msa0295000-mRNA-1:exon:14747;Parent=Msa0295000-mRNA-1
chr2_3 CDS 47201434 47201949 47201434 ID=Msa0295000-mRNA-1:cds;Parent=Msa0295000-mRNA-1
chr2_3 CDS 47202015 47202087 47202015 ID=Msa0295000-mRNA-1:cds;Parent=Msa0295000-mRNA-1
chr2_3 CDS 47204650 47204723 47204650 ID=Msa0295000-mRNA-1:cds;Parent=Msa0295000-mRNA-1
chr2_3 CDS 47204796 47204926 47204796 ID=Msa0295000-mRNA-1:cds;Parent=Msa0295000-mRNA-1
chr2_3 CDS 47205161 47205257 47205161 ID=Msa0295000-mRNA-1:cds;Parent=Msa0295000-mRNA-1
chr2_3 CDS 47205988 47206149 47205988 ID=Msa0295000-mRNA-1:cds;Parent=Msa0295000-mRNA-1
chr2_3 CDS 47206232 47206326 47206232 ID=Msa0295000-mRNA-1:cds;Parent=Msa0295000-mRNA-1
chr2_3 CDS 47206614 47206710 47206614 ID=Msa0295000-mRNA-1:cds;Parent=Msa0295000-mRNA-1
chr2_3 three_prime_UTR 47206711 47207028 47206711 ID=Msa0295000-mRNA-1:three_prime_utr;Parent=Msa0295000-mRNA-1
Gene Sequence

>Msa0295000

ATGGCAACAACGTATCACCAACCAGCATCCCTCGAAGAAGTTCGAACCCTATGGATAGGCGATTTACAATACTGGGTAGACGAAAACTATCTCACACACTGCTTCTCCCACACCGGCGAAGTCATCTCCATCAAAATCATCCGCAACAAAATCACCGGTCAACCAGAAGGTTATGGTTTCATCGAATTCGTCTCCCACTCTGCCGCCGAACGCGTTCTTCAAACCTACAACGGCACTCAAATGCCTGGTACCGAACAAACCTTCCGTTTAAACTGGGCTTCCTTTGGTATCGGTGAACGCCGCCCTGATGCGGGTCCCGATCATTCGATATTTGTGGGTGATTTGGCTCCGGATGTTACGGATTATTTACTACAAGAGACTTTTAGGACTCATTATGGGAGTGTTCGTGGTGCGAAGGTTGTGACTGATCCGAATACTGGGAGGAGTAAGGGGTATGGGTTTGTTAAATTTAGCGATGAGAGTGAGAGGAATCGGGCTATGTCGGAGATGAATGGTCAAAATCCTTATGCTGCTGCTGTTGGTGCTGTTGCTGTTGCTCCTGTTGTTGCTGCTGCTCCTGTTCCTAAAGCAATATATCCAGTGCCGGCATACACCGCCCCAGTGAATATAGTTCCACCAGAATACGATGTAAACAATACGACTATTTATGTTGGTAATTTGGATCTTAATGTCTCAGAGGAGGAGCTGAAGCAAAACTTTTTGCAATTTGGAGAGATTGTGTCTGTCAAAGTTCATCCCGGCAAAGCATGTGGTTTTGTTCAATTTGGGGCTAGAGCATCTGCTGAAGAAGCCATTCAGAAGATGCAGGGAAAGATATTAGGTCAACAAATGATCCGAGTTTCTTGGGGTAGGCCCCAAACAGCTAGACAGGACGTACCTGGAGGATGGGGACAACAGGTGGATCAAAGTCAATGGAGTGCATACTATGGGTATGGACAGCCGGGTTATGAAGCTTATGCATATGGGGCTGCTCAGGATCCTTCAATGTATGCATATGCTGGATATGCTGGCTATGCACAATACCCGCAACAGGTTGAAGGTGCTCAAGACGTATCAGCTATGTCTGTGCCTACCTTGGAACAAAGGGAAGAGTTGTATGATCCTCTGGCAATGCCCGATGTTGATAAGTTAAATGCTGCATATCTCTCAGTCCACGGAAATGCCATTTTAGGGCGGTCCCTCTGGCACAAAACCCATTCCTCATCCTTGCAGCAGCAAGCTTAG
Protein sequence

>Msa0295000

MATTYHQPASLEEVRTLWIGDLQYWVDENYLTHCFSHTGEVISIKIIRNKITGQPEGYGFIEFVSHSAAERVLQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPDHSIFVGDLAPDVTDYLLQETFRTHYGSVRGAKVVTDPNTGRSKGYGFVKFSDESERNRAMSEMNGQNPYAAAVGAVAVAPVVAAAPVPKAIYPVPAYTAPVNIVPPEYDVNNTTIYVGNLDLNVSEEELKQNFLQFGEIVSVKVHPGKACGFVQFGARASAEEAIQKMQGKILGQQMIRVSWGRPQTARQDVPGGWGQQVDQSQWSAYYGYGQPGYEAYAYGAAQDPSMYAYAGYAGYAQYPQQVEGAQDVSAMSVPTLEQREELYDPLAMPDVDKLNAAYLSVHGNAILGRSLWHKTHSSSLQQQA*