AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0567390

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0567390 MtrunA17_Chr8g0382191 94.701 1038 55 0 1 1038 47 1084 0.0 2054
Msa0567390 MtrunA17_Chr2g0279141 45.677 1064 473 27 2 1037 52 1038 0.0 801
Msa0567390 MtrunA17_Chr4g0050401 50.665 677 276 11 388 1037 382 1027 0.0 635
Msa0567390 MtrunA17_Chr4g0050401 37.295 244 119 6 2 231 52 275 4.89e-36 148
Msa0567390 MtrunA17_Chr8g0382181 61.774 327 108 5 5 318 8 330 2.97e-122 382
Msa0567390 MtrunA17_Chr8g0382181 74.150 147 38 0 410 556 330 476 1.38e-65 229
Msa0567390 MtrunA17_Chr8g0377501 43.011 558 278 13 450 992 402 934 1.96e-121 395
Msa0567390 MtrunA17_Chr8g0377501 48.077 156 62 4 2 151 53 195 5.98e-35 144
Msa0567390 MtrunA17_Chr3g0122351 39.855 552 294 9 455 994 386 911 6.24e-104 348
Msa0567390 MtrunA17_Chr3g0122351 70.238 84 25 0 2 85 46 129 1.66e-34 143
Msa0567390 MtrunA17_Chr4g0068161 33.078 653 383 18 386 1025 310 921 2.31e-86 298
Msa0567390 MtrunA17_Chr4g0068161 57.547 106 42 1 1 103 63 168 2.25e-25 113
Msa0567390 MtrunA17_Chr2g0294711 33.065 620 370 14 386 991 298 886 2.89e-84 292
Msa0567390 MtrunA17_Chr2g0294711 48.120 133 60 2 1 133 63 186 7.20e-31 131
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0567390 AT2G22300.2 47.610 1067 429 29 2 1034 52 1022 0.0 853
Msa0567390 AT2G22300.1 47.610 1067 429 29 2 1034 52 1022 0.0 853
Msa0567390 AT2G22300.3 47.547 1060 426 29 9 1034 1 964 0.0 843
Msa0567390 AT5G64220.1 45.455 1045 474 29 2 1019 52 1027 0.0 800
Msa0567390 AT5G64220.2 45.455 1045 474 29 2 1019 52 1027 0.0 800
Msa0567390 AT5G09410.4 49.629 673 291 14 388 1034 231 881 0.0 617
Msa0567390 AT5G09410.3 49.629 673 291 14 388 1034 411 1061 0.0 615
Msa0567390 AT5G09410.3 53.247 154 40 3 2 125 114 265 1.32e-37 153
Msa0567390 AT5G09410.1 49.629 673 291 14 388 1034 334 984 0.0 614
Msa0567390 AT5G09410.1 66.129 124 40 2 2 125 55 176 1.49e-42 169
Msa0567390 AT5G09410.2 49.629 673 291 14 388 1034 352 1002 0.0 614
Msa0567390 AT5G09410.2 66.129 124 40 2 2 125 55 176 1.51e-42 169
Msa0567390 AT1G67310.1 40.391 562 287 11 453 992 442 977 5.20e-105 352
Msa0567390 AT1G67310.1 53.571 112 42 1 2 113 75 176 1.83e-32 137
Msa0567390 AT3G16940.3 32.154 622 369 14 386 991 217 801 6.24e-79 276
Msa0567390 AT3G16940.3 59.341 91 37 0 1 91 34 124 7.16e-29 125
Msa0567390 AT3G16940.1 32.154 622 369 14 386 991 244 828 8.41e-79 276
Msa0567390 AT3G16940.1 59.341 91 37 0 1 91 61 151 7.94e-29 125
Msa0567390 AT3G16940.2 30.667 525 319 13 386 894 244 739 3.21e-54 202
Msa0567390 AT3G16940.2 59.341 91 37 0 1 91 61 151 5.41e-29 125

Find 216 sgRNAs with CRISPR-Local

Find 395 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGTTATTGGGTTCTGTTTC+AGG 0.110677 4_1:-68743356 None:intergenic
TCCAACATTGTTAATGTATT+TGG 0.116953 4_1:-68743237 None:intergenic
GATAGGGGACAGTTAGAATA+AGG 0.169692 4_1:-68742809 None:intergenic
ATTCCCCTTCTAGTGCTTAT+TGG 0.214001 4_1:+68744335 Msa0567390:CDS
AGGGAGAAGTGCATATTATT+TGG 0.230772 4_1:-68747663 None:intergenic
TGTTATAGTTAGTGAGAATT+TGG 0.234871 4_1:-68740916 None:intergenic
GAATACGATGGTGACAAATT+TGG 0.239421 4_1:+68746346 Msa0567390:CDS
ATGAACAACCAAACATATTA+TGG 0.239719 4_1:-68747482 None:intergenic
GAAATTTACCTTTGAGAGAT+AGG 0.252450 4_1:-68742826 None:intergenic
ACTATTGATTCCCGTGTTAT+TGG 0.255860 4_1:-68743369 None:intergenic
TGTGAACTCTCAAAAGTTCT+TGG 0.257449 4_1:+68743266 Msa0567390:CDS
TCTACGTAACATGTTCTAAT+AGG 0.258394 4_1:+68744914 Msa0567390:CDS
GCAAGATATCTTAGAAAATA+AGG 0.263006 4_1:+68743301 Msa0567390:CDS
GCCTGAATAGGCACTATCTT+TGG 0.278496 4_1:-68743984 None:intergenic
TTCCCCTTCTAGTGCTTATT+GGG 0.285574 4_1:+68744336 Msa0567390:CDS
AGCAACAATTGTTGGTTCTA+AGG 0.288908 4_1:-68745370 None:intergenic
ATTTGAAGACTCGGAAATTA+AGG 0.297823 4_1:+68744492 Msa0567390:CDS
AAAACTATGGGAAGATAATT+TGG 0.298279 4_1:+68746683 Msa0567390:CDS
CCACCTTCATCTAATACATT+TGG 0.299243 4_1:-68745303 None:intergenic
GTGAACTTTCGCGATGTAAA+TGG 0.307864 4_1:+68745402 Msa0567390:CDS
TTGGTTGTTCATTGTATGTA+TGG 0.312248 4_1:+68747493 Msa0567390:three_prime_UTR
ATACCTTCACTTCCCGATAA+TGG 0.312933 4_1:-68742197 None:intergenic
TGAAACTGTCGAGCTTCTTC+AGG 0.320899 4_1:-68744264 None:intergenic
CGTTGATCTTGAAGCATTGT+TGG 0.336518 4_1:+68747413 Msa0567390:CDS
TTGCTTCCCTCATATCTCTT+GGG 0.341997 4_1:+68745996 Msa0567390:CDS
CAGCCTTTCTTGGCTACGAT+TGG 0.345539 4_1:+68745346 Msa0567390:CDS
CCCAAAGATAGTGCCTATTC+AGG 0.346532 4_1:+68743983 Msa0567390:CDS
GATACAGTTGAAAGCGAAAA+TGG 0.348848 4_1:+68744358 Msa0567390:CDS
CAGCTGAAGCTGAAGGAAAT+TGG 0.351228 4_1:+68743471 Msa0567390:CDS
GACAAGTTAAAATCAGATCT+AGG 0.361350 4_1:+68744157 Msa0567390:CDS
CACCTTCATCTAATACATTT+GGG 0.362638 4_1:-68745302 None:intergenic
GGCATGCATTAAAGTTGCTT+TGG 0.362966 4_1:-68742418 None:intergenic
GGCTATTTCTGAGGGAACTA+TGG 0.368661 4_1:+68746780 Msa0567390:CDS
ATGAAGCAGAAGATTGTAAA+TGG 0.369204 4_1:+68744794 Msa0567390:CDS
GTCGGTTGGGATTGTGGAAA+AGG 0.373416 4_1:+68746705 Msa0567390:CDS
GTTGCTTCCCTCATATCTCT+TGG 0.375690 4_1:+68745995 Msa0567390:CDS
CTATTGATTCCCGTGTTATT+GGG 0.377443 4_1:-68743368 None:intergenic
ATTCAATAGCCATGCAAATT+CGG 0.381684 4_1:+68742727 Msa0567390:CDS
AGCTGATCATAGCAAATAGA+TGG 0.386884 4_1:-68744436 None:intergenic
GGTTAGATTGTAACATAATC+AGG 0.390531 4_1:+68747515 Msa0567390:three_prime_UTR
TGAAATTGTGATAGATGATC+AGG 0.393656 4_1:+68743157 Msa0567390:intron
GCGTCCATCCATAATATGTT+TGG 0.399301 4_1:+68747474 Msa0567390:three_prime_UTR
ATGGATGGACTGCTCTTCAT+TGG 0.403464 4_1:+68745421 Msa0567390:CDS
ACCAAATACATTAACAATGT+TGG 0.404096 4_1:+68743236 Msa0567390:CDS
TGGTATTGGTCTCTTGCATC+TGG 0.406003 4_1:-68746919 None:intergenic
CCATGCCCACAACATCCTTC+TGG 0.406110 4_1:+68746043 Msa0567390:CDS
TTAGAAAAGATGGACATAAC+TGG 0.406867 4_1:+68741128 Msa0567390:CDS
GGAAGATAATTTGGTCGGTT+GGG 0.407139 4_1:+68746692 Msa0567390:CDS
CATTCAACAACCTGTGGTAT+TGG 0.408725 4_1:-68746933 None:intergenic
ACGTGAGAGGTCACCAGGTT+AGG 0.411787 4_1:+68746659 Msa0567390:CDS
ACATCGTTCTAGTCCATTAT+CGG 0.412410 4_1:+68742184 Msa0567390:CDS
GTATCCCAATAAGCACTAGA+AGG 0.413133 4_1:-68744340 None:intergenic
AATTTGGTCGGTTGGGATTG+TGG 0.413549 4_1:+68746699 Msa0567390:CDS
GCCGACCTAGCTTCTGCAAA+TGG 0.416041 4_1:+68746076 Msa0567390:CDS
TTTCCTTGTGAACAGGCCTC+TGG 0.421100 4_1:+68743932 Msa0567390:intron
TTCACACCAGCAACAATTGT+TGG 0.422507 4_1:-68745378 None:intergenic
TTAGAACCAACAATTGTTGC+TGG 0.425908 4_1:+68745372 Msa0567390:CDS
CCTGAATAGGCACTATCTTT+GGG 0.427656 4_1:-68743983 None:intergenic
CATAGTTCTCCAAGTGCACC+TGG 0.428531 4_1:-68744405 None:intergenic
AACTGAGATACAAGAAAATC+AGG 0.429890 4_1:+68746960 Msa0567390:CDS
GAATATGAAGAAGCTGAATC+AGG 0.434942 4_1:+68742549 Msa0567390:CDS
CATTGATTATTCCCCAAGTT+GGG 0.435352 4_1:+68744468 Msa0567390:CDS
ATAGGGGACAGTTAGAATAA+GGG 0.437858 4_1:-68742808 None:intergenic
GGGAAGATAATTTGGTCGGT+TGG 0.442560 4_1:+68746691 Msa0567390:CDS
GCCAGTGAATCTTTCATTGA+AGG 0.442930 4_1:-68746241 None:intergenic
CAATTTCCTTCAGCTTCAGC+TGG 0.443285 4_1:-68743470 None:intergenic
CGTGTTGCAGCAACATGAAC+AGG 0.444655 4_1:-68746442 None:intergenic
AAATTTACCTTTGAGAGATA+GGG 0.446563 4_1:-68742825 None:intergenic
AGTTGATCATGTACAAGTTC+TGG 0.447402 4_1:-68745210 None:intergenic
AATGCGAAGTCACACAAGTC+TGG 0.449069 4_1:+68746406 Msa0567390:CDS
TCATTGATTATTCCCCAAGT+TGG 0.450073 4_1:+68744467 Msa0567390:CDS
TATTCCTTCCCAGGTGCACT+TGG 0.450888 4_1:+68744396 Msa0567390:CDS
ACAACAGAGAACACTATTCC+TGG 0.452005 4_1:-68744857 None:intergenic
AGCCTTTCTTGGCTACGATT+GGG 0.452371 4_1:+68745347 Msa0567390:CDS
TGTAAATGGTCATGCATGTT+CGG 0.458202 4_1:+68744808 Msa0567390:CDS
GAGTCTTCAAATGCCCAACT+TGG 0.460974 4_1:-68744481 None:intergenic
AGTAAAATCAGTTCTTTGCT+TGG 0.461341 4_1:+68745129 Msa0567390:CDS
CAGTTCTTTGCTTGGTAGGA+AGG 0.462643 4_1:+68745137 Msa0567390:CDS
TTAGAACATGTTACGTAGAA+AGG 0.466234 4_1:-68744910 None:intergenic
AATGGACACAAAGGAATTGC+TGG 0.466727 4_1:+68746094 Msa0567390:CDS
ATATTACGTTGGCGTCGAAA+AGG 0.469061 4_1:+68746730 Msa0567390:CDS
ACGAGATACTTTAGAAAAGA+TGG 0.469912 4_1:+68741118 Msa0567390:CDS
GAAGTCTCTGCCTCTGTGTT+AGG 0.470588 4_1:-68742492 None:intergenic
ACCTCAACACAAGGCTGGAC+GGG 0.474522 4_1:+68744885 Msa0567390:CDS
TCTCAAGGATATGAGACAAT+GGG 0.476448 4_1:+68743395 Msa0567390:CDS
CCCGAGGGAAGTCATGCTCT+TGG 0.481194 4_1:-68745065 None:intergenic
ATATCTCTTGGGGCAGCACC+AGG 0.481476 4_1:+68746007 Msa0567390:CDS
ATTCCAGAGAAAACAACAAA+AGG 0.481483 4_1:+68746324 Msa0567390:CDS
CCCAAGAGCATGACTTCCCT+CGG 0.481534 4_1:+68745064 Msa0567390:CDS
TGGATGGACTGCTCTTCATT+GGG 0.482883 4_1:+68745422 Msa0567390:CDS
CCGAGGGAAGTCATGCTCTT+GGG 0.487143 4_1:-68745064 None:intergenic
GGGATCGATAAAAGCCTAGT+TGG 0.487311 4_1:+68744178 Msa0567390:CDS
CTCACACGATGAGCCTGAAT+AGG 0.489940 4_1:-68743996 None:intergenic
CTAGTTCTTTACTCATCCAT+CGG 0.491817 4_1:-68744288 None:intergenic
GGCTCACGTGAGAGGTCACC+AGG 0.496633 4_1:+68746654 Msa0567390:intron
GTTTCAGGAAAAGACTGAAA+AGG 0.498768 4_1:-68743341 None:intergenic
TGCTTCCCTCATATCTCTTG+GGG 0.499217 4_1:+68745997 Msa0567390:CDS
TTGGTAGGAAGGACGATGAA+TGG 0.501312 4_1:+68745148 Msa0567390:CDS
AAATCAGTTCTTTGCTTGGT+AGG 0.505479 4_1:+68745133 Msa0567390:CDS
CGTTGGCGTCGAAAAGGTAG+TGG 0.510926 4_1:+68746736 Msa0567390:CDS
TTCAGAACAAGTTTCGCAGT+TGG 0.512320 4_1:+68746467 Msa0567390:CDS
AGTCTTCAAATGCCCAACTT+GGG 0.512638 4_1:-68744480 None:intergenic
CCAGAAGGATGTTGTGGGCA+TGG 0.516822 4_1:-68746043 None:intergenic
TGGTTGTTCATTGTATGTAT+GGG 0.517220 4_1:+68747494 Msa0567390:three_prime_UTR
ACCTTCAATGAAAGATTCAC+TGG 0.517231 4_1:+68746240 Msa0567390:CDS
TTTGTTGGTGTGTATGAAGA+AGG 0.517240 4_1:-68744084 None:intergenic
AAGGTTGCCTGTCATTCCTC+AGG 0.518272 4_1:+68743181 Msa0567390:CDS
CATGGATCAGTAAGTGCTCC+TGG 0.519816 4_1:-68746025 None:intergenic
TGGTAGGAAGGACGATGAAT+GGG 0.520017 4_1:+68745149 Msa0567390:CDS
CAGTACAACTATTCCTTCCC+AGG 0.520858 4_1:+68744387 Msa0567390:CDS
GAACAAGTTTCGCAGTTGGA+AGG 0.521020 4_1:+68746471 Msa0567390:CDS
CATCGTTCTAGTCCATTATC+GGG 0.523240 4_1:+68742185 Msa0567390:CDS
CTTCTTGAGTATAATTGACT+CGG 0.525223 4_1:-68744969 None:intergenic
TGTGTCCATTTGCAGAAGCT+AGG 0.527068 4_1:-68746081 None:intergenic
GGCCCAATCGTAGCCAAGAA+AGG 0.527167 4_1:-68745349 None:intergenic
GATATCTTAGAAAATAAGGC+TGG 0.527732 4_1:+68743305 Msa0567390:CDS
TAGTTATAGTGACAATGAGC+AGG 0.528100 4_1:+68744021 Msa0567390:CDS
ACAAGTTAAAATCAGATCTA+GGG 0.529700 4_1:+68744158 Msa0567390:CDS
AAGTGCCGGCAGAGATAACC+AGG 0.530702 4_1:+68744839 Msa0567390:CDS
TTCTCCAAGTGCACCTGGGA+AGG 0.531264 4_1:-68744400 None:intergenic
CTATTCCTGGTTATCTCTGC+CGG 0.532774 4_1:-68744844 None:intergenic
GGCCCAAATGTATTAGATGA+AGG 0.533133 4_1:+68745300 Msa0567390:CDS
GCACTTGGAGAACTATGTAC+TGG 0.534994 4_1:+68744411 Msa0567390:CDS
TTCTACCAGAAGGATGTTGT+GGG 0.536843 4_1:-68746048 None:intergenic
CAAATCAGAGGCTATTTCTG+AGG 0.541683 4_1:+68746771 Msa0567390:CDS
GTGCTGCCCCAAGAGATATG+AGG 0.541703 4_1:-68746003 None:intergenic
AACAAGTTTCGCAGTTGGAA+GGG 0.542396 4_1:+68746472 Msa0567390:CDS
CACCTCAACACAAGGCTGGA+CGG 0.542743 4_1:+68744884 Msa0567390:CDS
AGCTCGACAGTTTCAACCGA+TGG 0.542906 4_1:+68744272 Msa0567390:CDS
ACCCGTCCAGCCTTGTGTTG+AGG 0.545426 4_1:-68744886 None:intergenic
TCATCCACCTGAGGAATGAC+AGG 0.545608 4_1:-68743188 None:intergenic
TATTACAAGCACAATATCGA+TGG 0.548796 4_1:+68740873 None:intergenic
GAGTGTCTTCTATTCCAACT+AGG 0.550195 4_1:-68744192 None:intergenic
AGTGTATCTGTGGCAGAAGA+GGG 0.550559 4_1:+68744241 Msa0567390:CDS
TTTGCAGAAGCTAGGTCGGC+TGG 0.551088 4_1:-68746073 None:intergenic
AGAATTTGGCAAATTTCAGC+CGG 0.551681 4_1:-68740902 None:intergenic
TGAAGCTGAAGGAAATTGGC+AGG 0.551960 4_1:+68743475 Msa0567390:CDS
TGGAAAAGGTTATATTACGT+TGG 0.554077 4_1:+68746719 Msa0567390:CDS
TATCCCAATAAGCACTAGAA+GGG 0.554536 4_1:-68744339 None:intergenic
AATTTACCTTTGAGAGATAG+GGG 0.555076 4_1:-68742824 None:intergenic
CGATGGATGAGTAAAGAACT+AGG 0.555800 4_1:+68744289 Msa0567390:CDS
AAGTGTATCTGTGGCAGAAG+AGG 0.556458 4_1:+68744240 Msa0567390:CDS
TTTATACCAGCTGAAGCTGA+AGG 0.559293 4_1:+68743464 Msa0567390:CDS
GCAGGAAGCAAACTGAGAAA+AGG 0.561949 4_1:+68746854 Msa0567390:CDS
GTATTAGATGAAGGTGGCCA+AGG 0.562370 4_1:+68745309 Msa0567390:CDS
ACAACCAAACATATTATGGA+TGG 0.563921 4_1:-68747478 None:intergenic
AAATCAGAGGCTATTTCTGA+GGG 0.564813 4_1:+68746772 Msa0567390:CDS
ACAATATCGATGGCTACGTC+CGG 0.566740 4_1:+68740883 Msa0567390:five_prime_UTR
TTGTATGTTTGTTGATCACA+AGG 0.569291 4_1:-68742462 None:intergenic
AAGTTGGGCATTTGAAGACT+CGG 0.569405 4_1:+68744483 Msa0567390:CDS
CTGCAAAATGAAGCACACCT+TGG 0.570206 4_1:-68745326 None:intergenic
TCCATTTGCAGAAGCTAGGT+CGG 0.576737 4_1:-68746077 None:intergenic
GTCTTCAAATGCCCAACTTG+GGG 0.578425 4_1:-68744479 None:intergenic
TATACACCTCAACACAAGGC+TGG 0.578694 4_1:+68744880 Msa0567390:CDS
ATACTGTTTAGTAATGCTGA+TGG 0.578753 4_1:-68743429 None:intergenic
GCTAATTTCTAAGTGGCTGT+AGG 0.578993 4_1:-68747453 None:intergenic
AACTGTCCCCTATCTCTCAA+AGG 0.580934 4_1:+68742818 Msa0567390:CDS
GGCACTATCTTTGGGCCATG+TGG 0.581003 4_1:-68743975 None:intergenic
GGAATCAATAGTACTTCTCA+AGG 0.582466 4_1:+68743380 Msa0567390:CDS
CCAAGAGCATGACTTCCCTC+GGG 0.583296 4_1:+68745065 Msa0567390:CDS
GTTCGGCGAGATAGAAGTGC+CGG 0.585098 4_1:+68744825 Msa0567390:CDS
CTATGGGAAGATAATTTGGT+CGG 0.585590 4_1:+68746687 Msa0567390:CDS
TCATACACACCAACAAAACA+AGG 0.587677 4_1:+68744090 Msa0567390:CDS
GAAGCAAACTGAGAAAAGGT+TGG 0.588658 4_1:+68746858 Msa0567390:CDS
TTCTCAAGGATATGAGACAA+TGG 0.588805 4_1:+68743394 Msa0567390:CDS
TGCTGCCCCAAGAGATATGA+GGG 0.589348 4_1:-68746002 None:intergenic
GTTCTACCAGAAGGATGTTG+TGG 0.592131 4_1:-68746049 None:intergenic
TTATTATAGGCTCACGTGAG+AGG 0.593673 4_1:+68746646 Msa0567390:intron
AGTAGAAATCCGAATTTGCA+TGG 0.594305 4_1:-68742736 None:intergenic
TAAAAGATAAACTACATGCA+TGG 0.594674 4_1:+68745247 Msa0567390:CDS
CCATTGACTTCACTCTAGCA+AGG 0.595945 4_1:-68746888 None:intergenic
TTGCACTGCTACTACGCCCA+TGG 0.597003 4_1:+68741447 Msa0567390:CDS
CGAAAAGGTAGTGGTTTGCG+TGG 0.599858 4_1:+68746745 Msa0567390:CDS
CATTGACTTCACTCTAGCAA+GGG 0.600713 4_1:-68746887 None:intergenic
CCTTGCTAGAGTGAAGTCAA+TGG 0.603870 4_1:+68746888 Msa0567390:CDS
TTGTTATACACCTCAACACA+AGG 0.604166 4_1:+68744876 Msa0567390:CDS
ATTCTTTAAGCGCATCCACA+TGG 0.606620 4_1:+68743960 Msa0567390:CDS
AGAAACATGAGAGAAACCGT+TGG 0.609159 4_1:+68746169 Msa0567390:CDS
GACTCTATTAAGTGTATCTG+TGG 0.611735 4_1:+68744231 Msa0567390:CDS
ATTGCTGCTTCTGATCTCAC+CGG 0.611990 4_1:-68745001 None:intergenic
ACTCAAGAAGTCAACACTGC+CGG 0.614091 4_1:+68744982 Msa0567390:CDS
AGTCCATTATCGGGAAGTGA+AGG 0.615277 4_1:+68742194 Msa0567390:CDS
TCGGCTGGTGTTCTACCAGA+AGG 0.617785 4_1:-68746058 None:intergenic
TTGTGATAGATGATCAGGAA+AGG 0.618020 4_1:+68743162 Msa0567390:intron
GTTGCCTGTCATTCCTCAGG+TGG 0.619752 4_1:+68743184 Msa0567390:CDS
CTATTCAGGCTCATCGTGTG+AGG 0.626917 4_1:+68743997 Msa0567390:CDS
ATGAAGAAGGAACTGTTCCA+AGG 0.628051 4_1:-68744071 None:intergenic
ACTTTCGCGATGTAAATGGA+TGG 0.628820 4_1:+68745406 Msa0567390:CDS
TCTGAGGGAACTATGGTACA+AGG 0.629731 4_1:+68746787 Msa0567390:CDS
GATGGACGCTAATTTCTAAG+TGG 0.633815 4_1:-68747460 None:intergenic
TGACCACTGTTAATGCTAGA+CGG 0.638659 4_1:-68742519 None:intergenic
ATCCCAATAAGCACTAGAAG+GGG 0.640484 4_1:-68744338 None:intergenic
GCTTCTGCAAATGGACACAA+AGG 0.643597 4_1:+68746085 Msa0567390:CDS
GGAAGCTCATGAGAGACTCA+AGG 0.645990 4_1:+68741180 Msa0567390:CDS
TGAAACAGAACCCAATAACA+CGG 0.650306 4_1:+68743358 Msa0567390:CDS
TAATCGAATCTAAATCCCGA+GGG 0.653442 4_1:-68745080 None:intergenic
CCAAATGTATTAGATGAAGG+TGG 0.656043 4_1:+68745303 Msa0567390:CDS
ATGCAAGAGACCAATACCAC+AGG 0.658465 4_1:+68746923 Msa0567390:CDS
CTAATCGAATCTAAATCCCG+AGG 0.658480 4_1:-68745081 None:intergenic
GAAACAGAACCCAATAACAC+GGG 0.662228 4_1:+68743359 Msa0567390:CDS
ACGAACTTACTGGATGCTTG+AGG 0.663844 4_1:+68741494 Msa0567390:CDS
TTACCGTCTAGCATTAACAG+TGG 0.677007 4_1:+68742516 Msa0567390:CDS
GAAAAGATGGACATAACTGG+AGG 0.677852 4_1:+68741131 Msa0567390:CDS
ATGGACTGCTCTTCATTGGG+CGG 0.678377 4_1:+68745425 Msa0567390:CDS
AAACAACAAAAGGAATACGA+TGG 0.685779 4_1:+68746334 Msa0567390:CDS
TTTGCGTGGATTCAAATCAG+AGG 0.685933 4_1:+68746759 Msa0567390:CDS
TTACAACATTCAACAACCTG+TGG 0.686006 4_1:-68746939 None:intergenic
AAAATCGTAGTCATCCTCAG+TGG 0.687131 4_1:-68746821 None:intergenic
ATAGTTCTCCAAGTGCACCT+GGG 0.691663 4_1:-68744404 None:intergenic
CTCAAGGATATGAGACAATG+GGG 0.695507 4_1:+68743396 Msa0567390:CDS
ATACTTGGAGGCATATACGA+AGG 0.704350 4_1:-68740959 None:intergenic
GCTTAAAGAATTAAAACCAG+AGG 0.714724 4_1:-68743948 None:intergenic
CAAAGTTATGCCTAACACAG+AGG 0.717841 4_1:+68742482 Msa0567390:CDS
AGTAAGATATCATCCACCTG+AGG 0.729515 4_1:-68743197 None:intergenic
AGGTGTATCATCTTCCACTG+AGG 0.765631 4_1:+68746807 Msa0567390:CDS
ACAATGCTTCAAGATCAACG+AGG 0.891821 4_1:-68747410 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAATAATTTATAATCCT+TGG + chr4_1:68741591-68741610 Msa0567390:intron 10.0%
!!! AAATTATTTAGTTTTAAATC+AGG + chr4_1:68743633-68743652 Msa0567390:intron 10.0%
!! AAAAAGTTATTAAAAAAACA+TGG + chr4_1:68744641-68744660 Msa0567390:intron 10.0%
!!! AACATATCTTTCTAATTTTA+CGG + chr4_1:68741368-68741387 Msa0567390:intron 15.0%
!!! AGAAATTGCTAATTTTTTTT+TGG + chr4_1:68742080-68742099 Msa0567390:intron 15.0%
!! GAAGAATAAAAAAATAAAGA+AGG - chr4_1:68742653-68742672 None:intergenic 15.0%
!! ATATTAAAATAGATACAAGA+AGG - chr4_1:68742682-68742701 None:intergenic 15.0%
!!! TTTCAATTTTACAATTAGTA+TGG - chr4_1:68743142-68743161 None:intergenic 15.0%
!!! TTTTATGAATTGTGATGTTT+TGG + chr4_1:68741048-68741067 Msa0567390:intron 20.0%
!! GTTACAACTTTAATCTAAAT+TGG + chr4_1:68741257-68741276 Msa0567390:intron 20.0%
!! TCATATGTTATTCAATGTAA+TGG - chr4_1:68741400-68741419 None:intergenic 20.0%
!! TGATTAATAAAATTCCGTTA+AGG + chr4_1:68741640-68741659 Msa0567390:intron 20.0%
!!! GTATAAGTTGTTATTACAAT+TGG - chr4_1:68741758-68741777 None:intergenic 20.0%
!!! AATTGCTAATTTTTTTTTGG+TGG + chr4_1:68742083-68742102 Msa0567390:intron 20.0%
!! ACATTCTTAGTAACAATTTA+AGG + chr4_1:68742299-68742318 Msa0567390:intron 20.0%
!!! GAATACCTATATTACTTTTA+AGG - chr4_1:68742373-68742392 None:intergenic 20.0%
!!! ATTAGATTCTTCATTTTCTT+TGG - chr4_1:68742442-68742461 None:intergenic 20.0%
!!! CAACAATTTATTTTGATGTA+CGG + chr4_1:68742867-68742886 Msa0567390:intron 20.0%
!!! TTTTATATATTCCGAAATGT+TGG + chr4_1:68743084-68743103 Msa0567390:intron 20.0%
!!! AAAAATTTAAAGACTAGTCA+AGG + chr4_1:68743816-68743835 Msa0567390:intron 20.0%
!!! CTTTTAAAAGTATTTCATGA+GGG - chr4_1:68744132-68744151 None:intergenic 20.0%
!!! ACTACTAATATCAATTTTAC+AGG + chr4_1:68744738-68744757 Msa0567390:intron 20.0%
!!! GATACTTTTAATAAACGATT+TGG + chr4_1:68745030-68745049 Msa0567390:CDS 20.0%
!! AATATGCTTCATTTATCATA+GGG + chr4_1:68745658-68745677 Msa0567390:intron 20.0%
!! TCATAGTTGAAAAATGAAAA+TGG + chr4_1:68745738-68745757 Msa0567390:intron 20.0%
!!! TGATTTTTCAATTTTCATTG+AGG + chr4_1:68745937-68745956 Msa0567390:intron 20.0%
!! ATAATAAGTTAGAGGATTAA+AGG - chr4_1:68746633-68746652 None:intergenic 20.0%
!! TTAATCCTCTAACTTATTAT+AGG + chr4_1:68746633-68746652 Msa0567390:intron 20.0%
!! AAAACATATAGTGTGAAATT+TGG - chr4_1:68747028-68747047 None:intergenic 20.0%
!!! TTACTAGTTTATCAGAAATA+CGG + chr4_1:68747093-68747112 Msa0567390:intron 20.0%
!! AATTAAATGATATTAACTGC+TGG - chr4_1:68747210-68747229 None:intergenic 20.0%
!! TGTAGTTAAAAAGAAATTGT+AGG + chr4_1:68747589-68747608 Msa0567390:three_prime_UTR 20.0%
!! GTAGTTAAAAAGAAATTGTA+GGG + chr4_1:68747590-68747609 Msa0567390:three_prime_UTR 20.0%
! TGTTATAGTTAGTGAGAATT+TGG - chr4_1:68740919-68740938 None:intergenic 25.0%
! GAATCAGAATTAATCATACT+TGG - chr4_1:68740977-68740996 None:intergenic 25.0%
! AAAAAGATGGAAAAACTGTT+AGG + chr4_1:68741158-68741177 Msa0567390:CDS 25.0%
! AAAAGATGGAAAAACTGTTA+GGG + chr4_1:68741159-68741178 Msa0567390:CDS 25.0%
!! ATACCTAAGGTTTTTATCTT+AGG - chr4_1:68741230-68741249 None:intergenic 25.0%
! AATGTCATTAAAATCAATCC+TGG + chr4_1:68741322-68741341 Msa0567390:intron 25.0%
! ATTAAAATCAATCCTGGAAT+AGG + chr4_1:68741328-68741347 Msa0567390:intron 25.0%
!! GAATAACATATGATGTTTTC+AGG + chr4_1:68741407-68741426 Msa0567390:intron 25.0%
! TTTAGTGTGAGATTTGAAAA+TGG - chr4_1:68741538-68741557 None:intergenic 25.0%
! TAGAATTACATGCTTTAACT+AGG - chr4_1:68742051-68742070 None:intergenic 25.0%
!!! TCTTTATCCTTGTTATTTGA+TGG + chr4_1:68742250-68742269 Msa0567390:intron 25.0%
!!! ACATATAATTTTTCAGTGCT+TGG + chr4_1:68742337-68742356 Msa0567390:intron 25.0%
!! AAATTTACCTTTGAGAGATA+GGG - chr4_1:68742828-68742847 None:intergenic 25.0%
! TACATGATTGATCGATAAAA+GGG - chr4_1:68742922-68742941 None:intergenic 25.0%
! ATACATGATTGATCGATAAA+AGG - chr4_1:68742923-68742942 None:intergenic 25.0%
!!! TCTAGAATAGAATTTTACTG+CGG - chr4_1:68743034-68743053 None:intergenic 25.0%
! ACCAAATACATTAACAATGT+TGG + chr4_1:68743236-68743255 Msa0567390:CDS 25.0%
! TCCAACATTGTTAATGTATT+TGG - chr4_1:68743240-68743259 None:intergenic 25.0%
! GCAAGATATCTTAGAAAATA+AGG + chr4_1:68743301-68743320 Msa0567390:CDS 25.0%
!!! GCTTTTAAAAGTATTTCATG+AGG - chr4_1:68744133-68744152 None:intergenic 25.0%
! ACAAGTTAAAATCAGATCTA+GGG + chr4_1:68744158-68744177 Msa0567390:CDS 25.0%
! TTAAAAAAACATGGTATCCA+TGG + chr4_1:68744650-68744669 Msa0567390:intron 25.0%
! TAAAAGATAAACTACATGCA+TGG + chr4_1:68745247-68745266 Msa0567390:CDS 25.0%
! TTCAGAAAAAAACTGAAGAT+GGG + chr4_1:68745274-68745293 Msa0567390:CDS 25.0%
! TGACAATACATGAAACTAAT+AGG + chr4_1:68745531-68745550 Msa0567390:intron 25.0%
! CTGTATAAAATATGTGAAAC+AGG + chr4_1:68745597-68745616 Msa0567390:intron 25.0%
! CAATATGCTTCATTTATCAT+AGG + chr4_1:68745657-68745676 Msa0567390:intron 25.0%
! AGCATATTGAGTACAAAAAA+AGG - chr4_1:68745709-68745728 None:intergenic 25.0%
! AGTTGAAAAATGAAAATGGA+AGG + chr4_1:68745742-68745761 Msa0567390:intron 25.0%
!!! ACACTTCGTTTTTAATTAGA+GGG - chr4_1:68745826-68745845 None:intergenic 25.0%
! ATTTAAATAATCGAAGTGTG+TGG + chr4_1:68745847-68745866 Msa0567390:intron 25.0%
! TTTAAATAATCGAAGTGTGT+GGG + chr4_1:68745848-68745867 Msa0567390:intron 25.0%
!! TGCATTTTACTTTCATTATC+AGG + chr4_1:68745963-68745982 Msa0567390:intron 25.0%
!! GCATTTTACTTTCATTATCA+GGG + chr4_1:68745964-68745983 Msa0567390:intron 25.0%
! TTTGTACATAATTCATGCAA+AGG - chr4_1:68746562-68746581 None:intergenic 25.0%
! AAAACTATGGGAAGATAATT+TGG + chr4_1:68746683-68746702 Msa0567390:CDS 25.0%
!! TACTAGTTTATCAGAAATAC+GGG + chr4_1:68747094-68747113 Msa0567390:intron 25.0%
! ATGAACAACCAAACATATTA+TGG - chr4_1:68747485-68747504 None:intergenic 25.0%
!! TGATTCAAGATTTTTCTACA+AGG - chr4_1:68747559-68747578 None:intergenic 25.0%
TCAGAATTAATCATACTTGG+AGG - chr4_1:68740974-68740993 None:intergenic 30.0%
!! TGAATTGTGATGTTTTGGAT+TGG + chr4_1:68741053-68741072 Msa0567390:intron 30.0%
!! ACTTTTCTTGTTTGATCGAA+AGG + chr4_1:68741093-68741112 Msa0567390:CDS 30.0%
! ACGAGATACTTTAGAAAAGA+TGG + chr4_1:68741118-68741137 Msa0567390:CDS 30.0%
TTAGAAAAGATGGACATAAC+TGG + chr4_1:68741128-68741147 Msa0567390:CDS 30.0%
CAACCTAAGATAAAAACCTT+AGG + chr4_1:68741224-68741243 Msa0567390:intron 30.0%
TGTAACTGTAACAATACCTA+AGG - chr4_1:68741243-68741262 None:intergenic 30.0%
TTCAGTTTATTTCCTATTCC+AGG - chr4_1:68741343-68741362 None:intergenic 30.0%
!!! ATTGTCATTTTGTTCTCCAT+GGG - chr4_1:68741466-68741485 None:intergenic 30.0%
!!! AATTGTCATTTTGTTCTCCA+TGG - chr4_1:68741467-68741486 None:intergenic 30.0%
! ATTTTCAAAGACGAACTTAC+TGG + chr4_1:68741484-68741503 Msa0567390:CDS 30.0%
ATCCTTGGTTTATAACTAAG+TGG + chr4_1:68741606-68741625 Msa0567390:intron 30.0%
AACCACTTAGTTATAAACCA+AGG - chr4_1:68741611-68741630 None:intergenic 30.0%
TTGGTTTATAACTAAGTGGT+TGG + chr4_1:68741610-68741629 Msa0567390:intron 30.0%
! AGTTGTTATTACAATTGGAG+AGG - chr4_1:68741753-68741772 None:intergenic 30.0%
TTTGTATTCGACATTGTTAC+AGG + chr4_1:68742151-68742170 Msa0567390:intron 30.0%
TTGTATTCGACATTGTTACA+GGG + chr4_1:68742152-68742171 Msa0567390:intron 30.0%
TGAGATTCCATCAAATAACA+AGG - chr4_1:68742260-68742279 None:intergenic 30.0%
CTGGTCCTTAAAAGTAATAT+AGG + chr4_1:68742365-68742384 Msa0567390:intron 30.0%
! TTGTATGTTTGTTGATCACA+AGG - chr4_1:68742465-68742484 None:intergenic 30.0%
ATTCAATAGCCATGCAAATT+CGG + chr4_1:68742727-68742746 Msa0567390:CDS 30.0%
! AATTTACCTTTGAGAGATAG+GGG - chr4_1:68742827-68742846 None:intergenic 30.0%
! GAAATTTACCTTTGAGAGAT+AGG - chr4_1:68742829-68742848 None:intergenic 30.0%
!! TTAAAAGAGTGTGACTTTTG+AGG + chr4_1:68742953-68742972 Msa0567390:intron 30.0%
TACAATTAGTATGGCATGTA+AGG - chr4_1:68743133-68743152 None:intergenic 30.0%
TGAAATTGTGATAGATGATC+AGG + chr4_1:68743157-68743176 Msa0567390:intron 30.0%
GATATCTTAGAAAATAAGGC+TGG + chr4_1:68743305-68743324 Msa0567390:CDS 30.0%
ATACTGTTTAGTAATGCTGA+TGG - chr4_1:68743432-68743451 None:intergenic 30.0%
! GAAATGTGTCATTCTGATAT+TGG + chr4_1:68743527-68743546 Msa0567390:intron 30.0%
GTTCTGTATAAGCTTCAATA+TGG + chr4_1:68743667-68743686 Msa0567390:intron 30.0%
! TCTTAATTTTCCTTGTGAAC+AGG + chr4_1:68743925-68743944 Msa0567390:intron 30.0%
GCTTAAAGAATTAAAACCAG+AGG - chr4_1:68743951-68743970 None:intergenic 30.0%
!! AGTTGATTTTCAACAATCCT+TGG + chr4_1:68744054-68744073 Msa0567390:CDS 30.0%
GACAAGTTAAAATCAGATCT+AGG + chr4_1:68744157-68744176 Msa0567390:CDS 30.0%
ATTTGAAGACTCGGAAATTA+AGG + chr4_1:68744492-68744511 Msa0567390:CDS 30.0%
CAAGTGCAGAATATCAAAAT+AGG - chr4_1:68744521-68744540 None:intergenic 30.0%
! TTTTCTCTCTTTTTCTTCCA+TGG - chr4_1:68744670-68744689 None:intergenic 30.0%
AAAGTGCACTATATTGATGA+CGG + chr4_1:68744695-68744714 Msa0567390:intron 30.0%
! ATTTTACAGGTTCTCATTTC+AGG + chr4_1:68744751-68744770 Msa0567390:intron 30.0%
ATGAAGCAGAAGATTGTAAA+TGG + chr4_1:68744794-68744813 Msa0567390:CDS 30.0%
TTAGAACATGTTACGTAGAA+AGG - chr4_1:68744913-68744932 None:intergenic 30.0%
TCTACGTAACATGTTCTAAT+AGG + chr4_1:68744914-68744933 Msa0567390:CDS 30.0%
CTTCTTGAGTATAATTGACT+CGG - chr4_1:68744972-68744991 None:intergenic 30.0%
AGTAAAATCAGTTCTTTGCT+TGG + chr4_1:68745129-68745148 Msa0567390:CDS 30.0%
!!! CATCTTCAGTTTTTTTCTGA+AGG - chr4_1:68745275-68745294 None:intergenic 30.0%
CTTCAGAAAAAAACTGAAGA+TGG + chr4_1:68745273-68745292 Msa0567390:CDS 30.0%
AAAAAAACTGAAGATGGGAA+AGG + chr4_1:68745279-68745298 Msa0567390:CDS 30.0%
CACCTTCATCTAATACATTT+GGG - chr4_1:68745305-68745324 None:intergenic 30.0%
CATAGGGTTGAAAAATGAAA+AGG + chr4_1:68745674-68745693 Msa0567390:intron 30.0%
TGAAAATGGAAGGTTATGTT+AGG + chr4_1:68745752-68745771 Msa0567390:intron 30.0%
!! GACACTTCGTTTTTAATTAG+AGG - chr4_1:68745827-68745846 None:intergenic 30.0%
ATTCCAGAGAAAACAACAAA+AGG + chr4_1:68746324-68746343 Msa0567390:CDS 30.0%
!!! ATTCCTTTTGTTGTTTTCTC+TGG - chr4_1:68746330-68746349 None:intergenic 30.0%
AAACAACAAAAGGAATACGA+TGG + chr4_1:68746334-68746353 Msa0567390:CDS 30.0%
! GAATTTTTACAATTCGCTGT+CGG - chr4_1:68746519-68746538 None:intergenic 30.0%
ACAGCGAATTGTAAAAATTC+AGG + chr4_1:68746519-68746538 Msa0567390:CDS 30.0%
TACATAATTCATGCAAAGGT+TGG - chr4_1:68746558-68746577 None:intergenic 30.0%
TGGAAAAGGTTATATTACGT+TGG + chr4_1:68746719-68746738 Msa0567390:CDS 30.0%
!!! GACTACGATTTTTTGAAAGA+AGG + chr4_1:68746832-68746851 Msa0567390:CDS 30.0%
AACTGAGATACAAGAAAATC+AGG + chr4_1:68746960-68746979 Msa0567390:CDS 30.0%
TTGCACAGTTGTGAAAAAAA+TGG - chr4_1:68747054-68747073 None:intergenic 30.0%
ATCAAGAATGCAAAACTTAG+AGG + chr4_1:68747118-68747137 Msa0567390:intron 30.0%
AACCATAATGCAAAATCATC+AGG + chr4_1:68747172-68747191 Msa0567390:intron 30.0%
!! ATTTTGAAAGTCCTGATGAT+TGG - chr4_1:68747186-68747205 None:intergenic 30.0%
!! AAAAGGCATTTACAAAAGAC+TGG - chr4_1:68747333-68747352 None:intergenic 30.0%
! CTTTTGTAAATGCCTTTTGT+AGG + chr4_1:68747335-68747354 Msa0567390:intron 30.0%
ACAACCAAACATATTATGGA+TGG - chr4_1:68747481-68747500 None:intergenic 30.0%
TTGGTTGTTCATTGTATGTA+TGG + chr4_1:68747493-68747512 Msa0567390:three_prime_UTR 30.0%
TGGTTGTTCATTGTATGTAT+GGG + chr4_1:68747494-68747513 Msa0567390:three_prime_UTR 30.0%
GGTTAGATTGTAACATAATC+AGG + chr4_1:68747515-68747534 Msa0567390:three_prime_UTR 30.0%
! AGTTTTTGCATTTTTGTGTG+AGG - chr4_1:68747629-68747648 None:intergenic 30.0%
AGAATTTGGCAAATTTCAGC+CGG - chr4_1:68740905-68740924 None:intergenic 35.0%
!!! GTTTTGGATTGGTTGACAAT+AGG + chr4_1:68741064-68741083 Msa0567390:intron 35.0%
AACTGGAGGAAGAAAAAAGA+TGG + chr4_1:68741145-68741164 Msa0567390:CDS 35.0%
!! AACATATGATGTTTTCAGGC+TGG + chr4_1:68741411-68741430 Msa0567390:intron 35.0%
AGAGAACGATTTGACCTTAA+CGG - chr4_1:68741657-68741676 None:intergenic 35.0%
! CAGACAAGGCTTTAACATAA+AGG - chr4_1:68741788-68741807 None:intergenic 35.0%
ATTAAGCGCTTATTCAGACA+AGG - chr4_1:68741802-68741821 None:intergenic 35.0%
CAATACCAATATGTGTGAGA+TGG - chr4_1:68741895-68741914 None:intergenic 35.0%
! TTTTCTTCATTTGCTCTGCA+TGG - chr4_1:68741919-68741938 None:intergenic 35.0%
GTATTGCTGATCACATGTAT+TGG - chr4_1:68742009-68742028 None:intergenic 35.0%
!! AAAGAAGTACTTCCAGAGAT+AGG - chr4_1:68742111-68742130 None:intergenic 35.0%
!!! TCTCTGGAAGTACTTCTTTT+AGG + chr4_1:68742112-68742131 Msa0567390:intron 35.0%
ACATCGTTCTAGTCCATTAT+CGG + chr4_1:68742184-68742203 Msa0567390:CDS 35.0%
! TTTTCAGTGCTTGGTAAATC+TGG + chr4_1:68742346-68742365 Msa0567390:intron 35.0%
!!! TGATCAAGTTTTTTCCTCCA+GGG + chr4_1:68742393-68742412 Msa0567390:intron 35.0%
GAATATGAAGAAGCTGAATC+AGG + chr4_1:68742549-68742568 Msa0567390:CDS 35.0%
GGCTATTCAAAAAGTTCTCT+AGG - chr4_1:68742632-68742651 None:intergenic 35.0%
AGTAGAAATCCGAATTTGCA+TGG - chr4_1:68742739-68742758 None:intergenic 35.0%
! GCTTTAATCTTTTGAACAGC+AGG - chr4_1:68742782-68742801 None:intergenic 35.0%
ATAGGGGACAGTTAGAATAA+GGG - chr4_1:68742811-68742830 None:intergenic 35.0%
TTGTGATAGATGATCAGGAA+AGG + chr4_1:68743162-68743181 Msa0567390:intron 35.0%
TGTGAACTCTCAAAAGTTCT+TGG + chr4_1:68743266-68743285 Msa0567390:CDS 35.0%
!! AAGTTCTTGGCTTTTCATCA+TGG + chr4_1:68743279-68743298 Msa0567390:CDS 35.0%
GTTTCAGGAAAAGACTGAAA+AGG - chr4_1:68743344-68743363 None:intergenic 35.0%
TGAAACAGAACCCAATAACA+CGG + chr4_1:68743358-68743377 Msa0567390:CDS 35.0%
!! CTATTGATTCCCGTGTTATT+GGG - chr4_1:68743371-68743390 None:intergenic 35.0%
!! ACTATTGATTCCCGTGTTAT+TGG - chr4_1:68743372-68743391 None:intergenic 35.0%
GGAATCAATAGTACTTCTCA+AGG + chr4_1:68743380-68743399 Msa0567390:CDS 35.0%
TTCTCAAGGATATGAGACAA+TGG + chr4_1:68743394-68743413 Msa0567390:CDS 35.0%
TCTCAAGGATATGAGACAAT+GGG + chr4_1:68743395-68743414 Msa0567390:CDS 35.0%
AACCATGTCTGCAAGTAAAA+TGG + chr4_1:68743573-68743592 Msa0567390:intron 35.0%
! ATCCATTTTACTTGCAGACA+TGG - chr4_1:68743578-68743597 None:intergenic 35.0%
GAGCAGTTAAATGAGTTTGA+TGG - chr4_1:68743897-68743916 None:intergenic 35.0%
TAGTTATAGTGACAATGAGC+AGG + chr4_1:68744021-68744040 Msa0567390:CDS 35.0%
TTTGTTGGTGTGTATGAAGA+AGG - chr4_1:68744087-68744106 None:intergenic 35.0%
TCATACACACCAACAAAACA+AGG + chr4_1:68744090-68744109 Msa0567390:CDS 35.0%
!!! GCATAAGAACCTTGTTTTGT+TGG - chr4_1:68744102-68744121 None:intergenic 35.0%
GACTCTATTAAGTGTATCTG+TGG + chr4_1:68744231-68744250 Msa0567390:CDS 35.0%
! CTAGTTCTTTACTCATCCAT+CGG - chr4_1:68744291-68744310 None:intergenic 35.0%
TATCCCAATAAGCACTAGAA+GGG - chr4_1:68744342-68744361 None:intergenic 35.0%
GATACAGTTGAAAGCGAAAA+TGG + chr4_1:68744358-68744377 Msa0567390:CDS 35.0%
AGCTGATCATAGCAAATAGA+TGG - chr4_1:68744439-68744458 None:intergenic 35.0%
! TCATTGATTATTCCCCAAGT+TGG + chr4_1:68744467-68744486 Msa0567390:CDS 35.0%
! CATTGATTATTCCCCAAGTT+GGG + chr4_1:68744468-68744487 Msa0567390:CDS 35.0%
AGTGAACATATGGTCAAAAC+TGG - chr4_1:68744544-68744563 None:intergenic 35.0%
ACAACAGTTCAGTGAACATA+TGG - chr4_1:68744554-68744573 None:intergenic 35.0%
TGTAAATGGTCATGCATGTT+CGG + chr4_1:68744808-68744827 Msa0567390:CDS 35.0%
TAATCGAATCTAAATCCCGA+GGG - chr4_1:68745083-68745102 None:intergenic 35.0%
AAATCAGTTCTTTGCTTGGT+AGG + chr4_1:68745133-68745152 Msa0567390:CDS 35.0%
AGTTGATCATGTACAAGTTC+TGG - chr4_1:68745213-68745232 None:intergenic 35.0%
CCACCTTCATCTAATACATT+TGG - chr4_1:68745306-68745325 None:intergenic 35.0%
CCAAATGTATTAGATGAAGG+TGG + chr4_1:68745303-68745322 Msa0567390:CDS 35.0%
!! AGCAACAATTGTTGGTTCTA+AGG - chr4_1:68745373-68745392 None:intergenic 35.0%
TTAGAACCAACAATTGTTGC+TGG + chr4_1:68745372-68745391 Msa0567390:CDS 35.0%
ATTGTCAAAGTGTATCGTGT+TGG - chr4_1:68745518-68745537 None:intergenic 35.0%
! GTAAGCATTTTACTTCTGCT+AGG - chr4_1:68745623-68745642 None:intergenic 35.0%
GGGTTGAAAAATGAAAAGGT+TGG + chr4_1:68745678-68745697 Msa0567390:intron 35.0%
TTACTTTCATTATCAGGGAG+AGG + chr4_1:68745969-68745988 Msa0567390:intron 35.0%
!!! GACTCTTTGTTTTGTTCCAA+CGG - chr4_1:68746188-68746207 None:intergenic 35.0%
!! AGCACTCATTGTTTTGTTCT+CGG - chr4_1:68746210-68746229 None:intergenic 35.0%
ACCTTCAATGAAAGATTCAC+TGG + chr4_1:68746240-68746259 Msa0567390:CDS 35.0%
GAATACGATGGTGACAAATT+TGG + chr4_1:68746346-68746365 Msa0567390:CDS 35.0%
GTGAGCCTATAATAAGTTAG+AGG - chr4_1:68746641-68746660 None:intergenic 35.0%
ACCAGGTTAGGAAAAACTAT+GGG + chr4_1:68746671-68746690 Msa0567390:CDS 35.0%
CTATGGGAAGATAATTTGGT+CGG + chr4_1:68746687-68746706 Msa0567390:CDS 35.0%
!! AAATCAGAGGCTATTTCTGA+GGG + chr4_1:68746772-68746791 Msa0567390:CDS 35.0%
!!! ACGATTTTTTGAAAGAAGGC+AGG + chr4_1:68746836-68746855 Msa0567390:CDS 35.0%
TTACAACATTCAACAACCTG+TGG - chr4_1:68746942-68746961 None:intergenic 35.0%
! GTCCTGATGATTTTGCATTA+TGG - chr4_1:68747177-68747196 None:intergenic 35.0%
GATCTTGCTTTACCTACAAA+AGG - chr4_1:68747350-68747369 None:intergenic 35.0%
! ATACTTGGAGGCATATACGA+AGG - chr4_1:68740962-68740981 None:intergenic 40.0%
!! TTGGATTGGTTGACAATAGG+TGG + chr4_1:68741067-68741086 Msa0567390:intron 40.0%
GAAAAGATGGACATAACTGG+AGG + chr4_1:68741131-68741150 Msa0567390:CDS 40.0%
! AAGGCAGAAACTTTGAAGGA+GGG - chr4_1:68741858-68741877 None:intergenic 40.0%
TGTCTCCATCTCACACATAT+TGG + chr4_1:68741887-68741906 Msa0567390:intron 40.0%
GATGCATTTGTTCTTGCTTG+AGG + chr4_1:68741968-68741987 Msa0567390:intron 40.0%
!! TTTTTGGTGGTTCCTATCTC+TGG + chr4_1:68742096-68742115 Msa0567390:intron 40.0%
CATCGTTCTAGTCCATTATC+GGG + chr4_1:68742185-68742204 Msa0567390:CDS 40.0%
ATACCTTCACTTCCCGATAA+TGG - chr4_1:68742200-68742219 None:intergenic 40.0%
!!! CTGATCAAGTTTTTTCCTCC+AGG + chr4_1:68742392-68742411 Msa0567390:intron 40.0%
! TTAAAGTTGCTTTGGTTCCC+TGG - chr4_1:68742413-68742432 None:intergenic 40.0%
GGCATGCATTAAAGTTGCTT+TGG - chr4_1:68742421-68742440 None:intergenic 40.0%
CAAAGTTATGCCTAACACAG+AGG + chr4_1:68742482-68742501 Msa0567390:CDS 40.0%
TTACCGTCTAGCATTAACAG+TGG + chr4_1:68742516-68742535 Msa0567390:CDS 40.0%
TGACCACTGTTAATGCTAGA+CGG - chr4_1:68742522-68742541 None:intergenic 40.0%
GATAGGGGACAGTTAGAATA+AGG - chr4_1:68742812-68742831 None:intergenic 40.0%
CAAACTTAGTGACGTAGCAA+TGG + chr4_1:68742980-68742999 Msa0567390:intron 40.0%
!! TATTCCGAAATGTTGGCCTT+TGG + chr4_1:68743091-68743110 Msa0567390:intron 40.0%
TGATCCAAAGGCCAACATTT+CGG - chr4_1:68743098-68743117 None:intergenic 40.0%
TAAGATCTTGCCTGATCCAA+AGG - chr4_1:68743110-68743129 None:intergenic 40.0%
AGTAAGATATCATCCACCTG+AGG - chr4_1:68743200-68743219 None:intergenic 40.0%
! GTGTTATTGGGTTCTGTTTC+AGG - chr4_1:68743359-68743378 None:intergenic 40.0%
GAAACAGAACCCAATAACAC+GGG + chr4_1:68743359-68743378 Msa0567390:CDS 40.0%
CTCAAGGATATGAGACAATG+GGG + chr4_1:68743396-68743415 Msa0567390:CDS 40.0%
TTTATACCAGCTGAAGCTGA+AGG + chr4_1:68743464-68743483 Msa0567390:CDS 40.0%
TGAAGGAAATTGGCAGGTAT+GGG + chr4_1:68743481-68743500 Msa0567390:intron 40.0%
GACTCACTACAAAGTGATGT+TGG + chr4_1:68743726-68743745 Msa0567390:intron 40.0%
ATTCTTTAAGCGCATCCACA+TGG + chr4_1:68743960-68743979 Msa0567390:CDS 40.0%
CCTGAATAGGCACTATCTTT+GGG - chr4_1:68743986-68744005 None:intergenic 40.0%
ATGAAGAAGGAACTGTTCCA+AGG - chr4_1:68744074-68744093 None:intergenic 40.0%
GAGTGTCTTCTATTCCAACT+AGG - chr4_1:68744195-68744214 None:intergenic 40.0%
CGATGGATGAGTAAAGAACT+AGG + chr4_1:68744289-68744308 Msa0567390:CDS 40.0%
ATTCCCCTTCTAGTGCTTAT+TGG + chr4_1:68744335-68744354 Msa0567390:CDS 40.0%
TTCCCCTTCTAGTGCTTATT+GGG + chr4_1:68744336-68744355 Msa0567390:CDS 40.0%
ATCCCAATAAGCACTAGAAG+GGG - chr4_1:68744341-68744360 None:intergenic 40.0%
GTATCCCAATAAGCACTAGA+AGG - chr4_1:68744343-68744362 None:intergenic 40.0%
AGTCTTCAAATGCCCAACTT+GGG - chr4_1:68744483-68744502 None:intergenic 40.0%
AAGTTGGGCATTTGAAGACT+CGG + chr4_1:68744483-68744502 Msa0567390:CDS 40.0%
CTAATCGAATCTAAATCCCG+AGG - chr4_1:68745084-68745103 None:intergenic 40.0%
GGCCCAAATGTATTAGATGA+AGG + chr4_1:68745300-68745319 Msa0567390:CDS 40.0%
! CTTCATTTTGCAGCCTTTCT+TGG + chr4_1:68745336-68745355 Msa0567390:CDS 40.0%
TTCACACCAGCAACAATTGT+TGG - chr4_1:68745381-68745400 None:intergenic 40.0%
GTGAACTTTCGCGATGTAAA+TGG + chr4_1:68745402-68745421 Msa0567390:CDS 40.0%
ACTTTCGCGATGTAAATGGA+TGG + chr4_1:68745406-68745425 Msa0567390:CDS 40.0%
TGGGCTATTTAAGCATACCT+CGG + chr4_1:68745867-68745886 Msa0567390:intron 40.0%
ATTTAAGCATACCTCGGGAA+AGG + chr4_1:68745873-68745892 Msa0567390:intron 40.0%
! TGGACTCTTTTCATGGGAAA+TGG - chr4_1:68745905-68745924 None:intergenic 40.0%
! TCACGTTGGACTCTTTTCAT+GGG - chr4_1:68745911-68745930 None:intergenic 40.0%
AAAAATCACGAGTCTCACGT+TGG - chr4_1:68745925-68745944 None:intergenic 40.0%
TTGCTTCCCTCATATCTCTT+GGG + chr4_1:68745996-68746015 Msa0567390:CDS 40.0%
TTCTACCAGAAGGATGTTGT+GGG - chr4_1:68746051-68746070 None:intergenic 40.0%
AATGGACACAAAGGAATTGC+TGG + chr4_1:68746094-68746113 Msa0567390:CDS 40.0%
AGAAACATGAGAGAAACCGT+TGG + chr4_1:68746169-68746188 Msa0567390:CDS 40.0%
GCCAGTGAATCTTTCATTGA+AGG - chr4_1:68746244-68746263 None:intergenic 40.0%
TTCAGAACAAGTTTCGCAGT+TGG + chr4_1:68746467-68746486 Msa0567390:CDS 40.0%
AACAAGTTTCGCAGTTGGAA+GGG + chr4_1:68746472-68746491 Msa0567390:CDS 40.0%
TTATTATAGGCTCACGTGAG+AGG + chr4_1:68746646-68746665 Msa0567390:intron 40.0%
CACCAGGTTAGGAAAAACTA+TGG + chr4_1:68746670-68746689 Msa0567390:CDS 40.0%
! TCCCATAGTTTTTCCTAACC+TGG - chr4_1:68746675-68746694 None:intergenic 40.0%
GGAAGATAATTTGGTCGGTT+GGG + chr4_1:68746692-68746711 Msa0567390:CDS 40.0%
! ATATTACGTTGGCGTCGAAA+AGG + chr4_1:68746730-68746749 Msa0567390:CDS 40.0%
TTTGCGTGGATTCAAATCAG+AGG + chr4_1:68746759-68746778 Msa0567390:CDS 40.0%
!! CAAATCAGAGGCTATTTCTG+AGG + chr4_1:68746771-68746790 Msa0567390:CDS 40.0%
AAAATCGTAGTCATCCTCAG+TGG - chr4_1:68746824-68746843 None:intergenic 40.0%
GAAGCAAACTGAGAAAAGGT+TGG + chr4_1:68746858-68746877 Msa0567390:CDS 40.0%
!! CATTGACTTCACTCTAGCAA+GGG - chr4_1:68746890-68746909 None:intergenic 40.0%
CATTCAACAACCTGTGGTAT+TGG - chr4_1:68746936-68746955 None:intergenic 40.0%
TATGGTTCAGCAGATGATTC+AGG - chr4_1:68747159-68747178 None:intergenic 40.0%
ACAATGCTTCAAGATCAACG+AGG - chr4_1:68747413-68747432 None:intergenic 40.0%
!! CGTTGATCTTGAAGCATTGT+TGG + chr4_1:68747413-68747432 Msa0567390:CDS 40.0%
GCTAATTTCTAAGTGGCTGT+AGG - chr4_1:68747456-68747475 None:intergenic 40.0%
GATGGACGCTAATTTCTAAG+TGG - chr4_1:68747463-68747482 None:intergenic 40.0%
GCGTCCATCCATAATATGTT+TGG + chr4_1:68747474-68747493 Msa0567390:three_prime_UTR 40.0%
ACAATATCGATGGCTACGTC+CGG + chr4_1:68740883-68740902 Msa0567390:five_prime_UTR 45.0%
!! ATGTTTTCAGGCTGGAAGTG+TGG + chr4_1:68741419-68741438 Msa0567390:intron 45.0%
ACGAACTTACTGGATGCTTG+AGG + chr4_1:68741494-68741513 Msa0567390:CDS 45.0%
! CAAGGCAGAAACTTTGAAGG+AGG - chr4_1:68741859-68741878 None:intergenic 45.0%
AGGCAAGGCAGAAACTTTGA+AGG - chr4_1:68741862-68741881 None:intergenic 45.0%
TGTGAGATGGAGACAAAGTG+AGG - chr4_1:68741882-68741901 None:intergenic 45.0%
AGTCCATTATCGGGAAGTGA+AGG + chr4_1:68742194-68742213 Msa0567390:CDS 45.0%
AACTGTCCCCTATCTCTCAA+AGG + chr4_1:68742818-68742837 Msa0567390:CDS 45.0%
CTTAGTGACGTAGCAATGGA+TGG + chr4_1:68742984-68743003 Msa0567390:intron 45.0%
!! GAAATGTTGGCCTTTGGATC+AGG + chr4_1:68743097-68743116 Msa0567390:intron 45.0%
CAATTTCCTTCAGCTTCAGC+TGG - chr4_1:68743473-68743492 None:intergenic 45.0%
CAGCTGAAGCTGAAGGAAAT+TGG + chr4_1:68743471-68743490 Msa0567390:CDS 45.0%
TGAAGCTGAAGGAAATTGGC+AGG + chr4_1:68743475-68743494 Msa0567390:CDS 45.0%
CTGAAGGAAATTGGCAGGTA+TGG + chr4_1:68743480-68743499 Msa0567390:intron 45.0%
CCCAAAGATAGTGCCTATTC+AGG + chr4_1:68743983-68744002 Msa0567390:CDS 45.0%
GCCTGAATAGGCACTATCTT+TGG - chr4_1:68743987-68744006 None:intergenic 45.0%
GGGATCGATAAAAGCCTAGT+TGG + chr4_1:68744178-68744197 Msa0567390:CDS 45.0%
AAGTGTATCTGTGGCAGAAG+AGG + chr4_1:68744240-68744259 Msa0567390:CDS 45.0%
AGTGTATCTGTGGCAGAAGA+GGG + chr4_1:68744241-68744260 Msa0567390:CDS 45.0%
TGAAACTGTCGAGCTTCTTC+AGG - chr4_1:68744267-68744286 None:intergenic 45.0%
CAGTACAACTATTCCTTCCC+AGG + chr4_1:68744387-68744406 Msa0567390:CDS 45.0%
ATAGTTCTCCAAGTGCACCT+GGG - chr4_1:68744407-68744426 None:intergenic 45.0%
GCACTTGGAGAACTATGTAC+TGG + chr4_1:68744411-68744430 Msa0567390:CDS 45.0%
GTCTTCAAATGCCCAACTTG+GGG - chr4_1:68744482-68744501 None:intergenic 45.0%
GAGTCTTCAAATGCCCAACT+TGG - chr4_1:68744484-68744503 None:intergenic 45.0%
CTATTCCTGGTTATCTCTGC+CGG - chr4_1:68744847-68744866 None:intergenic 45.0%
TATACACCTCAACACAAGGC+TGG + chr4_1:68744880-68744899 Msa0567390:CDS 45.0%
ACTCAAGAAGTCAACACTGC+CGG + chr4_1:68744982-68745001 Msa0567390:CDS 45.0%
! ATTGCTGCTTCTGATCTCAC+CGG - chr4_1:68745004-68745023 None:intergenic 45.0%
CAGTTCTTTGCTTGGTAGGA+AGG + chr4_1:68745137-68745156 Msa0567390:CDS 45.0%
TTGGTAGGAAGGACGATGAA+TGG + chr4_1:68745148-68745167 Msa0567390:CDS 45.0%
TGGTAGGAAGGACGATGAAT+GGG + chr4_1:68745149-68745168 Msa0567390:CDS 45.0%
GTATTAGATGAAGGTGGCCA+AGG + chr4_1:68745309-68745328 Msa0567390:CDS 45.0%
CTGCAAAATGAAGCACACCT+TGG - chr4_1:68745329-68745348 None:intergenic 45.0%
AGCCTTTCTTGGCTACGATT+GGG + chr4_1:68745347-68745366 Msa0567390:CDS 45.0%
!! ATGGATGGACTGCTCTTCAT+TGG + chr4_1:68745421-68745440 Msa0567390:CDS 45.0%
!! TGGATGGACTGCTCTTCATT+GGG + chr4_1:68745422-68745441 Msa0567390:CDS 45.0%
GGGCTATTTAAGCATACCTC+GGG + chr4_1:68745868-68745887 Msa0567390:intron 45.0%
! CTCACGTTGGACTCTTTTCA+TGG - chr4_1:68745912-68745931 None:intergenic 45.0%
GTTGCTTCCCTCATATCTCT+TGG + chr4_1:68745995-68746014 Msa0567390:CDS 45.0%
TGCTTCCCTCATATCTCTTG+GGG + chr4_1:68745997-68746016 Msa0567390:CDS 45.0%
GTTCTACCAGAAGGATGTTG+TGG - chr4_1:68746052-68746071 None:intergenic 45.0%
TCCATTTGCAGAAGCTAGGT+CGG - chr4_1:68746080-68746099 None:intergenic 45.0%
TGTGTCCATTTGCAGAAGCT+AGG - chr4_1:68746084-68746103 None:intergenic 45.0%
GCTTCTGCAAATGGACACAA+AGG + chr4_1:68746085-68746104 Msa0567390:CDS 45.0%
AATGCGAAGTCACACAAGTC+TGG + chr4_1:68746406-68746425 Msa0567390:CDS 45.0%
GAACAAGTTTCGCAGTTGGA+AGG + chr4_1:68746471-68746490 Msa0567390:CDS 45.0%
GGGAAGATAATTTGGTCGGT+TGG + chr4_1:68746691-68746710 Msa0567390:CDS 45.0%
AATTTGGTCGGTTGGGATTG+TGG + chr4_1:68746699-68746718 Msa0567390:CDS 45.0%
!! GGCTATTTCTGAGGGAACTA+TGG + chr4_1:68746780-68746799 Msa0567390:CDS 45.0%
TCTGAGGGAACTATGGTACA+AGG + chr4_1:68746787-68746806 Msa0567390:CDS 45.0%
AGGTGTATCATCTTCCACTG+AGG + chr4_1:68746807-68746826 Msa0567390:CDS 45.0%
GCAGGAAGCAAACTGAGAAA+AGG + chr4_1:68746854-68746873 Msa0567390:CDS 45.0%
!! CCATTGACTTCACTCTAGCA+AGG - chr4_1:68746891-68746910 None:intergenic 45.0%
CCTTGCTAGAGTGAAGTCAA+TGG + chr4_1:68746888-68746907 Msa0567390:CDS 45.0%
!! TGGTATTGGTCTCTTGCATC+TGG - chr4_1:68746922-68746941 None:intergenic 45.0%
ATGCAAGAGACCAATACCAC+AGG + chr4_1:68746923-68746942 Msa0567390:CDS 45.0%
GTTCAGCAGATGATTCAGGT+GGG - chr4_1:68747155-68747174 None:intergenic 45.0%
! AAAGACTGGCTAAGCTTTGC+TGG - chr4_1:68747319-68747338 None:intergenic 45.0%
GGAAGCTCATGAGAGACTCA+AGG + chr4_1:68741180-68741199 Msa0567390:CDS 50.0%
GATGGAGACAAAGTGAGGCA+AGG - chr4_1:68741877-68741896 None:intergenic 50.0%
! AAGTTGCTTTGGTTCCCTGG+AGG - chr4_1:68742410-68742429 None:intergenic 50.0%
GAAGTCTCTGCCTCTGTGTT+AGG - chr4_1:68742495-68742514 None:intergenic 50.0%
AAGGTTGCCTGTCATTCCTC+AGG + chr4_1:68743181-68743200 Msa0567390:CDS 50.0%
TCATCCACCTGAGGAATGAC+AGG - chr4_1:68743191-68743210 None:intergenic 50.0%
TTTCCTTGTGAACAGGCCTC+TGG + chr4_1:68743932-68743951 Msa0567390:intron 50.0%
AAACCAGAGGCCTGTTCACA+AGG - chr4_1:68743938-68743957 None:intergenic 50.0%
CTCACACGATGAGCCTGAAT+AGG - chr4_1:68743999-68744018 None:intergenic 50.0%
CTATTCAGGCTCATCGTGTG+AGG + chr4_1:68743997-68744016 Msa0567390:CDS 50.0%
AGCTCGACAGTTTCAACCGA+TGG + chr4_1:68744272-68744291 Msa0567390:CDS 50.0%
TATTCCTTCCCAGGTGCACT+TGG + chr4_1:68744396-68744415 Msa0567390:CDS 50.0%
CATAGTTCTCCAAGTGCACC+TGG - chr4_1:68744408-68744427 None:intergenic 50.0%
CAGCCTTTCTTGGCTACGAT+TGG + chr4_1:68745346-68745365 Msa0567390:CDS 50.0%
! ATGGACTGCTCTTCATTGGG+CGG + chr4_1:68745425-68745444 Msa0567390:CDS 50.0%
TGCTGCCCCAAGAGATATGA+GGG - chr4_1:68746005-68746024 None:intergenic 50.0%
CATGGATCAGTAAGTGCTCC+TGG - chr4_1:68746028-68746047 None:intergenic 50.0%
CGTGTTGCAGCAACATGAAC+AGG - chr4_1:68746445-68746464 None:intergenic 50.0%
GTCGGTTGGGATTGTGGAAA+AGG + chr4_1:68746705-68746724 Msa0567390:CDS 50.0%
! CGAAAAGGTAGTGGTTTGCG+TGG + chr4_1:68746745-68746764 Msa0567390:CDS 50.0%
GGTTCAGCAGATGATTCAGG+TGG - chr4_1:68747156-68747175 None:intergenic 50.0%
! CTGATGATTGGCTGCTTTGC+TGG - chr4_1:68747247-68747266 None:intergenic 50.0%
CAGCAAAGCAGCCAATCATC+AGG + chr4_1:68747245-68747264 Msa0567390:intron 50.0%
TTGCACTGCTACTACGCCCA+TGG + chr4_1:68741447-68741466 Msa0567390:CDS 55.0%
GTTGCCTGTCATTCCTCAGG+TGG + chr4_1:68743184-68743203 Msa0567390:CDS 55.0%
GGCACTATCTTTGGGCCATG+TGG - chr4_1:68743978-68743997 None:intergenic 55.0%
TTCTCCAAGTGCACCTGGGA+AGG - chr4_1:68744403-68744422 None:intergenic 55.0%
! GTTCGGCGAGATAGAAGTGC+CGG + chr4_1:68744825-68744844 Msa0567390:CDS 55.0%
!! AAGTGCCGGCAGAGATAACC+AGG + chr4_1:68744839-68744858 Msa0567390:CDS 55.0%
CACCTCAACACAAGGCTGGA+CGG + chr4_1:68744884-68744903 Msa0567390:CDS 55.0%
ACCTCAACACAAGGCTGGAC+GGG + chr4_1:68744885-68744904 Msa0567390:CDS 55.0%
CCGAGGGAAGTCATGCTCTT+GGG - chr4_1:68745067-68745086 None:intergenic 55.0%
! CCCAAGAGCATGACTTCCCT+CGG + chr4_1:68745064-68745083 Msa0567390:CDS 55.0%
! CCAAGAGCATGACTTCCCTC+GGG + chr4_1:68745065-68745084 Msa0567390:CDS 55.0%
GGCCCAATCGTAGCCAAGAA+AGG - chr4_1:68745352-68745371 None:intergenic 55.0%
! CTTCATTGGGCGGCGTTTTG+TGG + chr4_1:68745435-68745454 Msa0567390:CDS 55.0%
GTGCTGCCCCAAGAGATATG+AGG - chr4_1:68746006-68746025 None:intergenic 55.0%
ATATCTCTTGGGGCAGCACC+AGG + chr4_1:68746007-68746026 Msa0567390:CDS 55.0%
CCAGAAGGATGTTGTGGGCA+TGG - chr4_1:68746046-68746065 None:intergenic 55.0%
CCATGCCCACAACATCCTTC+TGG + chr4_1:68746043-68746062 Msa0567390:CDS 55.0%
TCGGCTGGTGTTCTACCAGA+AGG - chr4_1:68746061-68746080 None:intergenic 55.0%
TTTGCAGAAGCTAGGTCGGC+TGG - chr4_1:68746076-68746095 None:intergenic 55.0%
GCCGACCTAGCTTCTGCAAA+TGG + chr4_1:68746076-68746095 Msa0567390:CDS 55.0%
ACGTGAGAGGTCACCAGGTT+AGG + chr4_1:68746659-68746678 Msa0567390:CDS 55.0%
! CGTTGGCGTCGAAAAGGTAG+TGG + chr4_1:68746736-68746755 Msa0567390:CDS 55.0%
! ACCCGTCCAGCCTTGTGTTG+AGG - chr4_1:68744889-68744908 None:intergenic 60.0%
CCCGAGGGAAGTCATGCTCT+TGG - chr4_1:68745068-68745087 None:intergenic 60.0%
! ATTGGGCGGCGTTTTGTGGC+AGG + chr4_1:68745439-68745458 Msa0567390:CDS 60.0%
AATGGCTCTCGCCTTTCCCG+AGG - chr4_1:68745887-68745906 None:intergenic 60.0%
GGCTCACGTGAGAGGTCACC+AGG + chr4_1:68746654-68746673 Msa0567390:intron 65.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 68740879 68747680 68740879 ID=Msa0567390;Name=Msa0567390
chr4_1 mRNA 68740879 68747680 68740879 ID=Msa0567390-mRNA-1;Parent=Msa0567390;Name=Msa0567390-mRNA-1;_AED=0.31;_eAED=0.31;_QI=89|1|1|1|0.90|0.83|12|213|1038
chr4_1 exon 68740879 68740977 68740879 ID=Msa0567390-mRNA-1:exon:22726;Parent=Msa0567390-mRNA-1
chr4_1 exon 68741086 68741201 68741086 ID=Msa0567390-mRNA-1:exon:22727;Parent=Msa0567390-mRNA-1
chr4_1 exon 68741429 68741517 68741429 ID=Msa0567390-mRNA-1:exon:22728;Parent=Msa0567390-mRNA-1
chr4_1 exon 68742173 68742215 68742173 ID=Msa0567390-mRNA-1:exon:22729;Parent=Msa0567390-mRNA-1
chr4_1 exon 68742414 68742570 68742414 ID=Msa0567390-mRNA-1:exon:22730;Parent=Msa0567390-mRNA-1
chr4_1 exon 68742726 68742839 68742726 ID=Msa0567390-mRNA-1:exon:22731;Parent=Msa0567390-mRNA-1
chr4_1 exon 68743171 68743496 68743171 ID=Msa0567390-mRNA-1:exon:22732;Parent=Msa0567390-mRNA-1
chr4_1 exon 68743947 68744513 68743947 ID=Msa0567390-mRNA-1:exon:22733;Parent=Msa0567390-mRNA-1
chr4_1 exon 68744760 68745460 68744760 ID=Msa0567390-mRNA-1:exon:22734;Parent=Msa0567390-mRNA-1
chr4_1 exon 68745985 68746540 68745985 ID=Msa0567390-mRNA-1:exon:22735;Parent=Msa0567390-mRNA-1
chr4_1 exon 68746655 68746981 68746655 ID=Msa0567390-mRNA-1:exon:22736;Parent=Msa0567390-mRNA-1
chr4_1 exon 68747357 68747680 68747357 ID=Msa0567390-mRNA-1:exon:22737;Parent=Msa0567390-mRNA-1
chr4_1 five_prime_UTR 68740879 68740967 68740879 ID=Msa0567390-mRNA-1:five_prime_utr;Parent=Msa0567390-mRNA-1
chr4_1 CDS 68740968 68740977 68740968 ID=Msa0567390-mRNA-1:cds;Parent=Msa0567390-mRNA-1
chr4_1 CDS 68741086 68741201 68741086 ID=Msa0567390-mRNA-1:cds;Parent=Msa0567390-mRNA-1
chr4_1 CDS 68741429 68741517 68741429 ID=Msa0567390-mRNA-1:cds;Parent=Msa0567390-mRNA-1
chr4_1 CDS 68742173 68742215 68742173 ID=Msa0567390-mRNA-1:cds;Parent=Msa0567390-mRNA-1
chr4_1 CDS 68742414 68742570 68742414 ID=Msa0567390-mRNA-1:cds;Parent=Msa0567390-mRNA-1
chr4_1 CDS 68742726 68742839 68742726 ID=Msa0567390-mRNA-1:cds;Parent=Msa0567390-mRNA-1
chr4_1 CDS 68743171 68743496 68743171 ID=Msa0567390-mRNA-1:cds;Parent=Msa0567390-mRNA-1
chr4_1 CDS 68743947 68744513 68743947 ID=Msa0567390-mRNA-1:cds;Parent=Msa0567390-mRNA-1
chr4_1 CDS 68744760 68745460 68744760 ID=Msa0567390-mRNA-1:cds;Parent=Msa0567390-mRNA-1
chr4_1 CDS 68745985 68746540 68745985 ID=Msa0567390-mRNA-1:cds;Parent=Msa0567390-mRNA-1
chr4_1 CDS 68746655 68746981 68746655 ID=Msa0567390-mRNA-1:cds;Parent=Msa0567390-mRNA-1
chr4_1 CDS 68747357 68747467 68747357 ID=Msa0567390-mRNA-1:cds;Parent=Msa0567390-mRNA-1
chr4_1 three_prime_UTR 68747468 68747680 68747468 ID=Msa0567390-mRNA-1:three_prime_utr;Parent=Msa0567390-mRNA-1
Gene Sequence

>Msa0567390

ATGCCTCCAAGTGGTTCACTTTTCTTGTTTGATCGAAAGGTGACGAGATACTTTAGAAAAGATGGACATAACTGGAGGAAGAAAAAAGATGGAAAAACTGTTAGGGAAGCTCATGAGAGACTCAAGGCTGGAAGTGTGGAAGTATTGCACTGCTACTACGCCCATGGAGAACAAAATGACAATTTTCAAAGACGAACTTACTGGATGCTTGAGGAGGAACTCTCACACATCGTTCTAGTCCATTATCGGGAAGTGAAGGGAACCAAAGCAACTTTAATGCATGCCAAAGAAAATGAAGAATCTAATCCTTGTGATCAACAAACATACAAAGTTATGCCTAACACAGAGGCAGAGACTTCTTTACCGTCTAGCATTAACAGTGGTCAAGCATCAGAATATGAAGAAGCTGAATCAGCATTCAATAGCCATGCAAATTCGGATTTCTACTCTTTTCTTGAGCTGCAACAGCCTGCTGTTCAAAAGATTAAAGCTCAACTCCCTTATTCTAACTGTCCCCTATCTCTCAAAGATGATCAGGAAAGGTTGCCTGTCATTCCTCAGGTGGATGATATCTTACTCAGTCAAGCTAATGAAACCAAATACATTAACAATGTTGGATTGACATGTGAACTCTCAAAAGTTCTTGGCTTTTCATCATGGCAAGATATCTTAGAAAATAAGGCTGGAAGTCATAATGTGCCTTTTCAGTCTTTTCCTGAAACAGAACCCAATAACACGGGAATCAATAGTACTTCTCAAGGATATGAGACAATGGGGCAACATTTAACCATCAGCATTACTAAACAGTATGATAATAGAAGTTTTATACCAGCTGAAGCTGAAGGAAATTGGCAGGCCTCTGGTTTTAATTCTTTAAGCGCATCCACATGGCCCAAAGATAGTGCCTATTCAGGCTCATCGTGTGAGGTTAGTTATAGTGACAATGAGCAGGAAGTTAATGAAGTTGATTTTCAACAATCCTTGGAACAGTTCCTTCTTCATACACACCAACAAAACAAGGTTCTTATGCAAAATAGCCCTCATGAAATACTTTTAAAAGCAGAAGACAAGTTAAAATCAGATCTAGGGATCGATAAAAGCCTAGTTGGAATAGAAGACACTCATTTCACTTCAAAGAAGACTCTATTAAGTGTATCTGTGGCAGAAGAGGGCCTGAAGAAGCTCGACAGTTTCAACCGATGGATGAGTAAAGAACTAGGCGATGTCGAAGAATCAAGCAAGCATTCCCCTTCTAGTGCTTATTGGGATACAGTTGAAAGCGAAAATGGTGTTGACAGTACAACTATTCCTTCCCAGGTGCACTTGGAGAACTATGTACTGGATCCATCTATTTGCTATGATCAGCTTTTTAGCATCATTGATTATTCCCCAAGTTGGGCATTTGAAGACTCGGAAATTAAGGTTCTCATTTCAGGACGATTCTTAAAGAGTCAACATGAAGCAGAAGATTGTAAATGGTCATGCATGTTCGGCGAGATAGAAGTGCCGGCAGAGATAACCAGGAATAGTGTTCTCTGTTGTTATACACCTCAACACAAGGCTGGACGGGTTCCTTTCTACGTAACATGTTCTAATAGGTTAGCATGTAGTGAAGTGCGCGAATTCGATTTCCGAGTCAATTATACTCAAGAAGTCAACACTGCCGGTGAGATCAGAAGCAGCAATACTTATGATACTTTTAATAAACGATTTGGAGAATTGTTGTCCCAAGAGCATGACTTCCCTCGGGATTTAGATTCGATTAGTGTGAATGAGAAATCTCAACTGAGAAGTAAAATCAGTTCTTTGCTTGGTAGGAAGGACGATGAATGGGACGAACTACTTAAATTTACTCTAGACAAAGATTTTTCTCCAGAACTTGTACATGATCAACTGCTTCAAAATCTTGTAAAAGATAAACTACATGCATGGCTCCTTCAGAAAAAAACTGAAGATGGGAAAGGCCCAAATGTATTAGATGAAGGTGGCCAAGGTGTGCTTCATTTTGCAGCCTTTCTTGGCTACGATTGGGCCTTAGAACCAACAATTGTTGCTGGTGTGAATGTGAACTTTCGCGATGTAAATGGATGGACTGCTCTTCATTGGGCGGCGTTTTGTGGCAGGGAGAGGACAGTTGCTTCCCTCATATCTCTTGGGGCAGCACCAGGAGCACTTACTGATCCATGCCCACAACATCCTTCTGGTAGAACACCAGCCGACCTAGCTTCTGCAAATGGACACAAAGGAATTGCTGGTTATCTTGCAGAATCTTTCTTAAGCTCACAACTCAAGTCTCTTGATTTGAAAAGAAACATGAGAGAAACCGTTGGAACAAAACAAAGAGTCCGAGAACAAAACAATGAGTGCTTCTCACATGAACCTTCAATGAAAGATTCACTGGCTGCAGTGTGCAATGCAACTCAAGCTGCTGCTCGTATTCATCAAGTTTTTAGAGTGCAATCATTCCAGAGAAAACAACAAAAGGAATACGATGGTGACAAATTTGGAATATCTGATGAACGTGCTCTTTCACTAATATCAGTGAATGCGAAGTCACACAAGTCTGGACTACGCAATGAGCCTGTTCATGTTGCTGCAACACGTATTCAGAACAAGTTTCGCAGTTGGAAGGGCAGAAAAGATTTTTTGATTATCCGACAGCGAATTGTAAAAATTCAGGCTCACGTGAGAGGTCACCAGGTTAGGAAAAACTATGGGAAGATAATTTGGTCGGTTGGGATTGTGGAAAAGGTTATATTACGTTGGCGTCGAAAAGGTAGTGGTTTGCGTGGATTCAAATCAGAGGCTATTTCTGAGGGAACTATGGTACAAGGTGTATCATCTTCCACTGAGGATGACTACGATTTTTTGAAAGAAGGCAGGAAGCAAACTGAGAAAAGGTTGGAGAAAGCCCTTGCTAGAGTGAAGTCAATGGCTCAATATCCAGATGCAAGAGACCAATACCACAGGTTGTTGAATGTTGTAACTGAGATACAAGAAAATCAGGTAAAGCAAGATCGAAATTTTATCAATTCAGAAGAAACAAGACAATTCAATAACCTCGTTGATCTTGAAGCATTGTTGGACGAAGATACTTTCATGCCTACAGCCACTTAG
Protein sequence

>Msa0567390

MPPSGSLFLFDRKVTRYFRKDGHNWRKKKDGKTVREAHERLKAGSVEVLHCYYAHGEQNDNFQRRTYWMLEEELSHIVLVHYREVKGTKATLMHAKENEESNPCDQQTYKVMPNTEAETSLPSSINSGQASEYEEAESAFNSHANSDFYSFLELQQPAVQKIKAQLPYSNCPLSLKDDQERLPVIPQVDDILLSQANETKYINNVGLTCELSKVLGFSSWQDILENKAGSHNVPFQSFPETEPNNTGINSTSQGYETMGQHLTISITKQYDNRSFIPAEAEGNWQASGFNSLSASTWPKDSAYSGSSCEVSYSDNEQEVNEVDFQQSLEQFLLHTHQQNKVLMQNSPHEILLKAEDKLKSDLGIDKSLVGIEDTHFTSKKTLLSVSVAEEGLKKLDSFNRWMSKELGDVEESSKHSPSSAYWDTVESENGVDSTTIPSQVHLENYVLDPSICYDQLFSIIDYSPSWAFEDSEIKVLISGRFLKSQHEAEDCKWSCMFGEIEVPAEITRNSVLCCYTPQHKAGRVPFYVTCSNRLACSEVREFDFRVNYTQEVNTAGEIRSSNTYDTFNKRFGELLSQEHDFPRDLDSISVNEKSQLRSKISSLLGRKDDEWDELLKFTLDKDFSPELVHDQLLQNLVKDKLHAWLLQKKTEDGKGPNVLDEGGQGVLHFAAFLGYDWALEPTIVAGVNVNFRDVNGWTALHWAAFCGRERTVASLISLGAAPGALTDPCPQHPSGRTPADLASANGHKGIAGYLAESFLSSQLKSLDLKRNMRETVGTKQRVREQNNECFSHEPSMKDSLAAVCNATQAAARIHQVFRVQSFQRKQQKEYDGDKFGISDERALSLISVNAKSHKSGLRNEPVHVAATRIQNKFRSWKGRKDFLIIRQRIVKIQAHVRGHQVRKNYGKIIWSVGIVEKVILRWRRKGSGLRGFKSEAISEGTMVQGVSSSTEDDYDFLKEGRKQTEKRLEKALARVKSMAQYPDARDQYHRLLNVVTEIQENQVKQDRNFINSEETRQFNNLVDLEALLDEDTFMPTAT*