Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1028540 | XP_003624080.1 | 95.358 | 517 | 24 | 0 | 1 | 517 | 1 | 517 | 0.0 | 998 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1028540 | sp|P46547|PIP_AERSO | 43.498 | 446 | 226 | 10 | 64 | 509 | 2 | 421 | 1.47e-120 | 363 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1028540 | G7L6P1 | 95.358 | 517 | 24 | 0 | 1 | 517 | 1 | 517 | 0.0 | 998 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1028540 | Msa1067590 | 0.865942 | 4.093932e-65 | -8.615850e-47 |
| Msa1028540 | Msa1112960 | 0.976389 | 9.869166e-142 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1028540 | MtrunA17_Chr7g0248701 | 95.358 | 517 | 24 | 0 | 1 | 517 | 1 | 517 | 0.0 | 998 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1028540 | AT3G61540.1 | 74.398 | 457 | 114 | 1 | 61 | 517 | 62 | 515 | 0.0 | 724 |
Find 138 sgRNAs with CRISPR-Local
Find 321 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTGGACCTTGGACAATTT+TGG | 0.126771 | 7_1:+61591192 | Msa1028540:CDS |
| GCATAGGTGGCCCTTCCTTC+TGG | 0.157533 | 7_1:+61591746 | Msa1028540:intron |
| ATGCCTGAATGTCATATAAT+TGG | 0.164206 | 7_1:-61593020 | None:intergenic |
| AATTATTAATTATTTATTAA+TGG | 0.174487 | 7_1:+61593630 | Msa1028540:three_prime_UTR |
| ACAGTTTCGTCTCATCTTAA+TGG | 0.216029 | 7_1:+61590921 | Msa1028540:CDS |
| ACTAATGAGTTCATGCATTC+TGG | 0.269501 | 7_1:+61593305 | Msa1028540:CDS |
| ATTTCAGTAAATATAATAAT+AGG | 0.289635 | 7_1:-61593534 | None:intergenic |
| CATAGGTGGCCCTTCCTTCT+GGG | 0.305590 | 7_1:+61591747 | Msa1028540:intron |
| GTCCCAATTATATGACATTC+AGG | 0.308263 | 7_1:+61593017 | Msa1028540:CDS |
| GTGGGATCCTACTTTAGTTC+CGG | 0.328918 | 7_1:+61591950 | Msa1028540:CDS |
| AAGTAGTGACTTATTCTCTT+AGG | 0.335186 | 7_1:-61591978 | None:intergenic |
| ATTGTCCAAGGTCCAGCATT+TGG | 0.342399 | 7_1:-61591187 | None:intergenic |
| AAGAGTGACGAGGATGAAAT+TGG | 0.342596 | 7_1:-61589346 | None:intergenic |
| CAAGAGTCTGCAGCCCTCTT+GGG | 0.345042 | 7_1:-61591781 | None:intergenic |
| CCAAGAGTCTGCAGCCCTCT+TGG | 0.358001 | 7_1:-61591782 | None:intergenic |
| GGTCTCTCTGGCTTAGGATC+TGG | 0.360506 | 7_1:+61591803 | Msa1028540:CDS |
| TGGGATCCTACTTTAGTTCC+GGG | 0.370052 | 7_1:+61591951 | Msa1028540:CDS |
| GATGGTCTGCCAGTAGAATA+AGG | 0.370734 | 7_1:+61592547 | Msa1028540:CDS |
| CAAAGTTCTTGATCATTTGT+TGG | 0.375660 | 7_1:+61593346 | Msa1028540:CDS |
| TCCTAGCGTTGCCTAGCCTT+TGG | 0.377305 | 7_1:+61593445 | Msa1028540:three_prime_UTR |
| CTGCAGACTCTTGGTCTCTC+TGG | 0.384271 | 7_1:+61591791 | Msa1028540:CDS |
| TTCGCTCGTGAAGTTGTTGC+AGG | 0.393688 | 7_1:+61589608 | Msa1028540:CDS |
| TACATCTTTGAATGGTTTCA+AGG | 0.395179 | 7_1:-61592965 | None:intergenic |
| GCAGTGCATCCATGTCCTAT+TGG | 0.395461 | 7_1:-61591500 | None:intergenic |
| CATTTGTTGGGAATGTTAAA+CGG | 0.404860 | 7_1:+61593359 | Msa1028540:CDS |
| AAAGTTCTTGATCATTTGTT+GGG | 0.410247 | 7_1:+61593347 | Msa1028540:CDS |
| ACATAAAACATTGGTGGGAC+TGG | 0.418718 | 7_1:-61593423 | None:intergenic |
| ACTTCTCTGCAGCGAGGAAC+AGG | 0.422644 | 7_1:+61591034 | Msa1028540:intron |
| AACTTCAGTCCTTATTCTAC+TGG | 0.423287 | 7_1:-61592556 | None:intergenic |
| GTTCGCCTTGTTCCAAATGC+TGG | 0.428426 | 7_1:+61591175 | Msa1028540:CDS |
| ACTCTTGGTCTCTCTGGCTT+AGG | 0.428598 | 7_1:+61591797 | Msa1028540:CDS |
| CAATCTCCGGTGACATGCTC+CGG | 0.430327 | 7_1:-61589491 | None:intergenic |
| ATTTAAAATCTTCATCCAAC+CGG | 0.433720 | 7_1:-61589220 | None:intergenic |
| CCAAGAGGGCTGCAGACTCT+TGG | 0.439564 | 7_1:+61591782 | Msa1028540:CDS |
| TAATAAACGGCAGCTGCAAC+AGG | 0.439828 | 7_1:-61593209 | None:intergenic |
| GACATGCTCCGGCGAGGAGG+TGG | 0.441501 | 7_1:-61589480 | None:intergenic |
| GAAACAGCTTCTCAAATAGC+TGG | 0.441550 | 7_1:+61593266 | Msa1028540:CDS |
| ATACATGTCTTCATAATAAA+CGG | 0.444263 | 7_1:-61593222 | None:intergenic |
| TTGGGACCAATCCTTCTTCT+CGG | 0.448445 | 7_1:-61593001 | None:intergenic |
| ATTCTGGCTTGCGTGATGAC+GGG | 0.451939 | 7_1:+61593321 | Msa1028540:CDS |
| TGCGTGAGCTTCGGTGAGAA+AGG | 0.454517 | 7_1:-61589418 | None:intergenic |
| TCATTGGAATGCGTGAGCTT+CGG | 0.455215 | 7_1:-61589427 | None:intergenic |
| TGCCTGAATGTCATATAATT+GGG | 0.462537 | 7_1:-61593019 | None:intergenic |
| ATGCTCCGGCGAGGAGGTGG+AGG | 0.463493 | 7_1:-61589477 | None:intergenic |
| CTCCGGCGAGGAGGTGGAGG+AGG | 0.463882 | 7_1:-61589474 | None:intergenic |
| ATATGAGCTACATCTTTGAA+TGG | 0.468347 | 7_1:-61592973 | None:intergenic |
| CGGAGCATGTCACCGGAGAT+TGG | 0.471151 | 7_1:+61589492 | Msa1028540:CDS |
| TCATATACTGTCCGAGAAGA+AGG | 0.473550 | 7_1:+61592990 | Msa1028540:CDS |
| GCAATTAAAGCTGCTAAAGA+AGG | 0.476169 | 7_1:+61592594 | Msa1028540:CDS |
| ATATTTACTGAAATAATGTC+AGG | 0.476978 | 7_1:+61593543 | Msa1028540:three_prime_UTR |
| TTTAAATTATGGCAGAGTTA+CGG | 0.478103 | 7_1:+61591401 | Msa1028540:intron |
| TCAATGTCACAATTCAAGTC+TGG | 0.485879 | 7_1:+61591082 | Msa1028540:CDS |
| CTTCTCAAATAGCTGGGATC+AGG | 0.486016 | 7_1:+61593273 | Msa1028540:CDS |
| AACAATGGTGATCAAAATAG+AGG | 0.490017 | 7_1:-61593389 | None:intergenic |
| CTCCTCCTCCACCTCCTCGC+CGG | 0.492725 | 7_1:+61589472 | Msa1028540:CDS |
| ACATGAATCCATCTATTGTC+AGG | 0.493822 | 7_1:+61592141 | Msa1028540:CDS |
| CATTCTGGCTTGCGTGATGA+CGG | 0.495763 | 7_1:+61593320 | Msa1028540:CDS |
| TCTGGCTTAGGATCTGGAGC+TGG | 0.499369 | 7_1:+61591809 | Msa1028540:CDS |
| CTTATTCTCTTAGGTGATCC+CGG | 0.501387 | 7_1:-61591969 | None:intergenic |
| ACCGGTGGAATTCCTCCAAT+AGG | 0.501435 | 7_1:+61591485 | Msa1028540:CDS |
| TCCTCGCCGGAGCATGTCAC+CGG | 0.504160 | 7_1:+61589485 | Msa1028540:CDS |
| GAGGAATTCCACCGGTCAGA+AGG | 0.505211 | 7_1:-61591478 | None:intergenic |
| ATAGGTGGCCCTTCCTTCTG+GGG | 0.506672 | 7_1:+61591748 | Msa1028540:intron |
| CGAGGAGGTGGAGGAGGAGA+CGG | 0.509853 | 7_1:-61589468 | None:intergenic |
| AAATAGCTGGGATCAGGCTA+TGG | 0.511594 | 7_1:+61593279 | Msa1028540:CDS |
| TGCAGGGTTCTGCTAGTAGA+TGG | 0.513146 | 7_1:+61592529 | Msa1028540:intron |
| TTTCTAGGTTTGAGAGAGTG+TGG | 0.523426 | 7_1:+61591931 | Msa1028540:intron |
| CATAAAACATTGGTGGGACT+GGG | 0.527966 | 7_1:-61593422 | None:intergenic |
| GCGATGGTAAGTCCGTTCAT+TGG | 0.527986 | 7_1:-61589443 | None:intergenic |
| GGAGGAGGAGACGGTGGCGA+TGG | 0.529291 | 7_1:-61589459 | None:intergenic |
| TTCTGGCTTGCGTGATGACG+GGG | 0.530180 | 7_1:+61593322 | Msa1028540:CDS |
| TGAATCTCATCAAACATCCA+TGG | 0.532905 | 7_1:-61592940 | None:intergenic |
| TTGTTCCAAATGCTGGACCT+TGG | 0.539407 | 7_1:+61591182 | Msa1028540:CDS |
| AGGGCTTGCGTCAGCCCTTG+TGG | 0.543083 | 7_1:-61591458 | None:intergenic |
| CTGACGCAAGCCCTTCTGAC+CGG | 0.547262 | 7_1:+61591467 | Msa1028540:CDS |
| TACTGTCCGAGAAGAAGGAT+TGG | 0.549609 | 7_1:+61592995 | Msa1028540:CDS |
| TCGTCTCATCTTAATGGACC+AGG | 0.557516 | 7_1:+61590927 | Msa1028540:CDS |
| GCGTGAGCTTCGGTGAGAAA+GGG | 0.558381 | 7_1:-61589417 | None:intergenic |
| GTCCCTCTCGATTACTCTCA+AGG | 0.558596 | 7_1:+61589557 | Msa1028540:CDS |
| GAATCTCATCAAACATCCAT+GGG | 0.559504 | 7_1:-61592939 | None:intergenic |
| GGTGATCCCGGAACTAAAGT+AGG | 0.561474 | 7_1:-61591957 | None:intergenic |
| TAGCTGAACAAGAAGGAGGA+GGG | 0.562297 | 7_1:+61591630 | Msa1028540:CDS |
| CATTATTATGTGAGGTGAGT+GGG | 0.563392 | 7_1:-61589276 | None:intergenic |
| TTCTAGGTTTGAGAGAGTGT+GGG | 0.563972 | 7_1:+61591932 | Msa1028540:intron |
| CATCCACTAGATTCAGTTGG+TGG | 0.568088 | 7_1:-61590880 | None:intergenic |
| AATTATTTAGCTGAACAAGA+AGG | 0.568672 | 7_1:+61591623 | Msa1028540:CDS |
| GGTGGTCGGCACTCATACCC+AGG | 0.569057 | 7_1:-61590862 | None:intergenic |
| AAGAGTCTGCAGCCCTCTTG+GGG | 0.573534 | 7_1:-61591780 | None:intergenic |
| AAGGTCCAGCATTTGGAACA+AGG | 0.574892 | 7_1:-61591180 | None:intergenic |
| TTAGCTGAACAAGAAGGAGG+AGG | 0.575861 | 7_1:+61591629 | Msa1028540:CDS |
| GGTGAGAAAGGGAGAGTCTG+AGG | 0.576570 | 7_1:-61589406 | None:intergenic |
| ACGCAAGCCCTTCTGACCGG+TGG | 0.577852 | 7_1:+61591470 | Msa1028540:CDS |
| CACTAGATTCAGTTGGTGGT+CGG | 0.578030 | 7_1:-61590876 | None:intergenic |
| TTACTGAAATAATGTCAGGT+TGG | 0.579653 | 7_1:+61593547 | Msa1028540:three_prime_UTR |
| AAACAGCTTCTCAAATAGCT+GGG | 0.579714 | 7_1:+61593267 | Msa1028540:CDS |
| TAGGTGGCCCTTCCTTCTGG+GGG | 0.580614 | 7_1:+61591749 | Msa1028540:intron |
| GTGCATCCATGTCCTATTGG+AGG | 0.585173 | 7_1:-61591497 | None:intergenic |
| ATCCATCCACTAGATTCAGT+TGG | 0.587259 | 7_1:-61590883 | None:intergenic |
| CACCAACTGAATCTAGTGGA+TGG | 0.590816 | 7_1:+61590881 | Msa1028540:CDS |
| TCCTATTGGAGGAATTCCAC+CGG | 0.590937 | 7_1:-61591486 | None:intergenic |
| GTGAGAAAGGGAGAGTCTGA+GGG | 0.591149 | 7_1:-61589405 | None:intergenic |
| GTACTACAAAAGATACCCTC+AGG | 0.591325 | 7_1:+61591574 | Msa1028540:CDS |
| CTAGGACATAAAACATTGGT+GGG | 0.597187 | 7_1:-61593428 | None:intergenic |
| ACATTATTATGTGAGGTGAG+TGG | 0.603531 | 7_1:-61589277 | None:intergenic |
| ACGAAGACGGAGTGAAGGTA+CGG | 0.607003 | 7_1:-61589519 | None:intergenic |
| AGCTGAACAAGAAGGAGGAG+GGG | 0.607085 | 7_1:+61591631 | Msa1028540:CDS |
| GGAATTCCTCCAATAGGACA+TGG | 0.607220 | 7_1:+61591491 | Msa1028540:CDS |
| GGTGACATGCTCCGGCGAGG+AGG | 0.609169 | 7_1:-61589483 | None:intergenic |
| ACCAAAGGCTAGGCAACGCT+AGG | 0.611720 | 7_1:-61593446 | None:intergenic |
| ACCTGCCCCAAAATTGTCCA+AGG | 0.613042 | 7_1:-61591199 | None:intergenic |
| AGCTCACGCATTCCAATGAA+CGG | 0.613457 | 7_1:+61589431 | Msa1028540:CDS |
| GGAGGTGGAGGAGGAGACGG+TGG | 0.618074 | 7_1:-61589465 | None:intergenic |
| ACAGTCTTCGACTAAGATCA+CGG | 0.618266 | 7_1:+61589583 | Msa1028540:CDS |
| TGATCTTAGTCGAAGACTGT+AGG | 0.619626 | 7_1:-61589580 | None:intergenic |
| GCTAGGACATAAAACATTGG+TGG | 0.619882 | 7_1:-61593429 | None:intergenic |
| AGGAATTCCACCGGTCAGAA+GGG | 0.624664 | 7_1:-61591477 | None:intergenic |
| TCTGGCTTGCGTGATGACGG+GGG | 0.627112 | 7_1:+61593323 | Msa1028540:CDS |
| CTGGGAGAGAAGAGTAACAA+TGG | 0.631254 | 7_1:-61593404 | None:intergenic |
| TCCGGTGACATGCTCCGGCG+AGG | 0.640777 | 7_1:-61589486 | None:intergenic |
| TGAATCTGTGATCACGAAGA+CGG | 0.643417 | 7_1:-61589532 | None:intergenic |
| AAATTATGGCAGAGTTACGG+TGG | 0.644222 | 7_1:+61591404 | Msa1028540:intron |
| TATTTAGCTGAACAAGAAGG+AGG | 0.644860 | 7_1:+61591626 | Msa1028540:CDS |
| GGCCTTGAGAGTAATCGAGA+GGG | 0.652247 | 7_1:-61589559 | None:intergenic |
| TGATCACGAAGACGGAGTGA+AGG | 0.654079 | 7_1:-61589524 | None:intergenic |
| GTCACAATTCAAGTCTGGAG+AGG | 0.655467 | 7_1:+61591087 | Msa1028540:CDS |
| GACATTGATGACACAGACAA+AGG | 0.656327 | 7_1:-61591067 | None:intergenic |
| CGACCACCAACTGAATCTAG+TGG | 0.661326 | 7_1:+61590877 | Msa1028540:CDS |
| GGGGCATCTTAACCCCAAGA+GGG | 0.663762 | 7_1:+61591768 | Msa1028540:CDS |
| AACGCTAGGACATAAAACAT+TGG | 0.665080 | 7_1:-61593432 | None:intergenic |
| AGGCCTTGAGAGTAATCGAG+AGG | 0.695258 | 7_1:-61589560 | None:intergenic |
| TGAGAAAGGGAGAGTCTGAG+GGG | 0.709822 | 7_1:-61589404 | None:intergenic |
| TCATGTAGAAGAGCATACAG+TGG | 0.712488 | 7_1:-61592124 | None:intergenic |
| TCAGGCATTGAATAACAACA+AGG | 0.725364 | 7_1:+61593035 | Msa1028540:CDS |
| GTGGTGAGAAGAAAAGATAG+TGG | 0.725726 | 7_1:-61589317 | None:intergenic |
| GTGAGAAGAAAAGATAGTGG+TGG | 0.729472 | 7_1:-61589314 | None:intergenic |
| AAAACGCGAAAAGAGTGACG+AGG | 0.733255 | 7_1:-61589356 | None:intergenic |
| GATAGCAACATTATTATGTG+AGG | 0.734191 | 7_1:-61589284 | None:intergenic |
| AGGATGAAATTGGAGCAATG+TGG | 0.804271 | 7_1:-61589336 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTATTAATTATTTATTAA+TGG | + | chr7_1:61593630-61593649 | Msa1028540:three_prime_UTR | 0.0% |
| !! | AAAAGAAAAATTACTAAATT+TGG | + | chr7_1:61590221-61590240 | Msa1028540:intron | 10.0% |
| !! | AAAGAAAAATTACTAAATTT+GGG | + | chr7_1:61590222-61590241 | Msa1028540:intron | 10.0% |
| !! | ATTTCAGTAAATATAATAAT+AGG | - | chr7_1:61593537-61593556 | None:intergenic | 10.0% |
| !!! | AAATTATTTTCTATCATTTT+AGG | + | chr7_1:61593580-61593599 | Msa1028540:three_prime_UTR | 10.0% |
| !!! | ACAAAATTTATATTTCTATG+AGG | + | chr7_1:61590427-61590446 | Msa1028540:intron | 15.0% |
| !!! | CTTGTGTTATTTTTAAATTA+TGG | + | chr7_1:61591390-61591409 | Msa1028540:intron | 15.0% |
| !! | ATAATTGAATATGTTTATCA+AGG | + | chr7_1:61593125-61593144 | Msa1028540:intron | 15.0% |
| !! | TGAATTTCAAATTTATACCA+AGG | + | chr7_1:61590000-61590019 | Msa1028540:intron | 20.0% |
| !!! | TTCTTTTCTTTATGAAACTA+TGG | + | chr7_1:61590071-61590090 | Msa1028540:intron | 20.0% |
| !!! | TCTTTTCTTTATGAAACTAT+GGG | + | chr7_1:61590072-61590091 | Msa1028540:intron | 20.0% |
| !! | TAATCTTACAGCTATATAAT+TGG | + | chr7_1:61590284-61590303 | Msa1028540:intron | 20.0% |
| !! | AATCTTACAGCTATATAATT+GGG | + | chr7_1:61590285-61590304 | Msa1028540:intron | 20.0% |
| !!! | TTTTTTTTTCTTACCTTTCT+AGG | + | chr7_1:61591916-61591935 | Msa1028540:intron | 20.0% |
| !! | AAAAAATTCTTACAGCATTT+AGG | - | chr7_1:61592004-61592023 | None:intergenic | 20.0% |
| !! | AATATGTTAACAGAATAACT+TGG | - | chr7_1:61593164-61593183 | None:intergenic | 20.0% |
| !! | ATACATGTCTTCATAATAAA+CGG | - | chr7_1:61593225-61593244 | None:intergenic | 20.0% |
| !! | ATATTTACTGAAATAATGTC+AGG | + | chr7_1:61593543-61593562 | Msa1028540:three_prime_UTR | 20.0% |
| !! | ATTTAAAATCTTCATCCAAC+CGG | - | chr7_1:61589223-61589242 | None:intergenic | 25.0% |
| !! | AACCATTCAATTATTTTCCT+TGG | + | chr7_1:61589657-61589676 | Msa1028540:intron | 25.0% |
| ! | ATCCAAGGAAAATAATTGAA+TGG | - | chr7_1:61589662-61589681 | None:intergenic | 25.0% |
| ! | GTATCGAATATTTAGTTATC+TGG | + | chr7_1:61589720-61589739 | Msa1028540:intron | 25.0% |
| ! | TGGAATGTAATCCAAATTAT+TGG | + | chr7_1:61589740-61589759 | Msa1028540:intron | 25.0% |
| ! | TCATTCAGAATCCAATAATT+TGG | - | chr7_1:61589754-61589773 | None:intergenic | 25.0% |
| ! | ATAGTTAACATTTCCTAACA+GGG | - | chr7_1:61590131-61590150 | None:intergenic | 25.0% |
| ! | TGTTAGGAAATGTTAACTAT+GGG | + | chr7_1:61590131-61590150 | Msa1028540:intron | 25.0% |
| !! | TTATATTTCTATGAGGAATG+TGG | + | chr7_1:61590434-61590453 | Msa1028540:intron | 25.0% |
| ! | AAAAGAAATCTCTATGATTC+TGG | - | chr7_1:61590593-61590612 | None:intergenic | 25.0% |
| ! | CCTTGCAAAAATAGTAAATA+TGG | - | chr7_1:61590838-61590857 | None:intergenic | 25.0% |
| !!! | CCATATTTACTATTTTTGCA+AGG | + | chr7_1:61590835-61590854 | Msa1028540:CDS | 25.0% |
| !!! | TATTTACTATTTTTGCAAGG+TGG | + | chr7_1:61590838-61590857 | Msa1028540:CDS | 25.0% |
| ! | TTTGTATGTGTGATAACTTT+AGG | + | chr7_1:61590987-61591006 | Msa1028540:intron | 25.0% |
| ! | ATTGAATTTCAAGGTTACAT+TGG | - | chr7_1:61591356-61591375 | None:intergenic | 25.0% |
| ! | TAAGCAATCATTGAATTTCA+AGG | - | chr7_1:61591365-61591384 | None:intergenic | 25.0% |
| ! | TTTAAATTATGGCAGAGTTA+CGG | + | chr7_1:61591401-61591420 | Msa1028540:intron | 25.0% |
| ! | AATTATTTAGCTGAACAAGA+AGG | + | chr7_1:61591623-61591642 | Msa1028540:CDS | 25.0% |
| ! | AGATAGTTGTAAAAAACACA+AGG | - | chr7_1:61591873-61591892 | None:intergenic | 25.0% |
| !! | GTATAAGAATTTCAAGTAGT+TGG | - | chr7_1:61592439-61592458 | None:intergenic | 25.0% |
| ! | ACTTGAAATTCTTATACTGT+TGG | + | chr7_1:61592442-61592461 | Msa1028540:intron | 25.0% |
| ! | CTTGAAATTCTTATACTGTT+GGG | + | chr7_1:61592443-61592462 | Msa1028540:intron | 25.0% |
| ! | ATGAAGTTATAAAGTCTGTT+TGG | - | chr7_1:61592764-61592783 | None:intergenic | 25.0% |
| ! | TTCTAAATATAATGTGAGTG+CGG | - | chr7_1:61593070-61593089 | None:intergenic | 25.0% |
| ! | TCATATTATACTATGATCAC+AGG | + | chr7_1:61593184-61593203 | Msa1028540:intron | 25.0% |
| ! | AAAGTTCTTGATCATTTGTT+GGG | + | chr7_1:61593347-61593366 | Msa1028540:CDS | 25.0% |
| ! | AAAGAAGTTCAAAAAACCAA+AGG | - | chr7_1:61593464-61593483 | None:intergenic | 25.0% |
| !!! | TATCATTTTAGGTGTTTTGT+AGG | + | chr7_1:61593591-61593610 | Msa1028540:three_prime_UTR | 25.0% |
| GATAGCAACATTATTATGTG+AGG | - | chr7_1:61589287-61589306 | None:intergenic | 30.0% | |
| TTCATGCAAATATGAATCCA+AGG | - | chr7_1:61589677-61589696 | None:intergenic | 30.0% | |
| TGGATTCTCTTTACAAGAAA+AGG | - | chr7_1:61589825-61589844 | None:intergenic | 30.0% | |
| ! | GAGAATCCAAATCATTTTAG+TGG | + | chr7_1:61589836-61589855 | Msa1028540:intron | 30.0% |
| GAAACTATGGGACATATAAT+TGG | + | chr7_1:61590084-61590103 | Msa1028540:intron | 30.0% | |
| CATAGTTAACATTTCCTAAC+AGG | - | chr7_1:61590132-61590151 | None:intergenic | 30.0% | |
| CTGTTAGGAAATGTTAACTA+TGG | + | chr7_1:61590130-61590149 | Msa1028540:intron | 30.0% | |
| GTTAGGAAATGTTAACTATG+GGG | + | chr7_1:61590132-61590151 | Msa1028540:intron | 30.0% | |
| TTAACTATGGGGCATATATA+TGG | + | chr7_1:61590143-61590162 | Msa1028540:intron | 30.0% | |
| TAACTATGGGGCATATATAT+GGG | + | chr7_1:61590144-61590163 | Msa1028540:intron | 30.0% | |
| CACTCTTTAAGCACTTTAAA+CGG | + | chr7_1:61590190-61590209 | Msa1028540:intron | 30.0% | |
| ATGGTATTACTGGTGAAATT+TGG | + | chr7_1:61590379-61590398 | Msa1028540:intron | 30.0% | |
| TGTTGGAATATCCTATGTTT+CGG | + | chr7_1:61590487-61590506 | Msa1028540:intron | 30.0% | |
| ! | ATCACACGAAATTTTCTATG+TGG | - | chr7_1:61590680-61590699 | None:intergenic | 30.0% |
| !!! | TAATTTTTTAGACTGCCTGA+TGG | + | chr7_1:61590706-61590725 | Msa1028540:intron | 30.0% |
| TAAAGCAATGCTAAAGACTA+TGG | - | chr7_1:61591265-61591284 | None:intergenic | 30.0% | |
| ATAGTCTTTAGCATTGCTTT+AGG | + | chr7_1:61591264-61591283 | Msa1028540:intron | 30.0% | |
| TAGTCTTTAGCATTGCTTTA+GGG | + | chr7_1:61591265-61591284 | Msa1028540:intron | 30.0% | |
| !! | GAACAATTTTGATATCCTGA+GGG | - | chr7_1:61591592-61591611 | None:intergenic | 30.0% |
| !! | TGAACAATTTTGATATCCTG+AGG | - | chr7_1:61591593-61591612 | None:intergenic | 30.0% |
| AATAAGGAATTGAGCAAACT+TGG | - | chr7_1:61591708-61591727 | None:intergenic | 30.0% | |
| AAGTAGTGACTTATTCTCTT+AGG | - | chr7_1:61591981-61592000 | None:intergenic | 30.0% | |
| AAACTGCATAGAACAAAAAC+TGG | - | chr7_1:61592077-61592096 | None:intergenic | 30.0% | |
| ! | AAGTTTTACCTGACAATAGA+TGG | - | chr7_1:61592152-61592171 | None:intergenic | 30.0% |
| ! | TGTCAGGTAAAACTTCTTTT+CGG | + | chr7_1:61592157-61592176 | Msa1028540:intron | 30.0% |
| ACCAACTATTGTGAAAGTTT+AGG | + | chr7_1:61592205-61592224 | Msa1028540:intron | 30.0% | |
| ! | TTGAAGCATTAACAATGCTT+AGG | + | chr7_1:61592307-61592326 | Msa1028540:intron | 30.0% |
| ! | TTATACAGATGATTTTCCCA+TGG | + | chr7_1:61592923-61592942 | Msa1028540:intron | 30.0% |
| TACATCTTTGAATGGTTTCA+AGG | - | chr7_1:61592968-61592987 | None:intergenic | 30.0% | |
| ATATGAGCTACATCTTTGAA+TGG | - | chr7_1:61592976-61592995 | None:intergenic | 30.0% | |
| TGCCTGAATGTCATATAATT+GGG | - | chr7_1:61593022-61593041 | None:intergenic | 30.0% | |
| ATGCCTGAATGTCATATAAT+TGG | - | chr7_1:61593023-61593042 | None:intergenic | 30.0% | |
| TAACAGAATAACTTGGAGAT+TGG | - | chr7_1:61593157-61593176 | None:intergenic | 30.0% | |
| CAAAGTTCTTGATCATTTGT+TGG | + | chr7_1:61593346-61593365 | Msa1028540:CDS | 30.0% | |
| ! | CATTTGTTGGGAATGTTAAA+CGG | + | chr7_1:61593359-61593378 | Msa1028540:CDS | 30.0% |
| AACAATGGTGATCAAAATAG+AGG | - | chr7_1:61593392-61593411 | None:intergenic | 30.0% | |
| TTACTGAAATAATGTCAGGT+TGG | + | chr7_1:61593547-61593566 | Msa1028540:three_prime_UTR | 30.0% | |
| CATTATTATGTGAGGTGAGT+GGG | - | chr7_1:61589279-61589298 | None:intergenic | 35.0% | |
| ACATTATTATGTGAGGTGAG+TGG | - | chr7_1:61589280-61589299 | None:intergenic | 35.0% | |
| CAACGTCCACTAAAATGATT+TGG | - | chr7_1:61589845-61589864 | None:intergenic | 35.0% | |
| !! | CAAATCATTTTAGTGGACGT+TGG | + | chr7_1:61589843-61589862 | Msa1028540:intron | 35.0% |
| ! | TTAGTGGACGTTGGAAATTA+CGG | + | chr7_1:61589852-61589871 | Msa1028540:intron | 35.0% |
| ! | CCAAGCAGTTAAAATTTTGG+CGG | - | chr7_1:61589960-61589979 | None:intergenic | 35.0% |
| !!! | CGCCAAAATTTTAACTGCTT+GGG | + | chr7_1:61589958-61589977 | Msa1028540:intron | 35.0% |
| !!! | GCCAAAATTTTAACTGCTTG+GGG | + | chr7_1:61589959-61589978 | Msa1028540:intron | 35.0% |
| CAAATTTATACCAAGGCCTA+AGG | + | chr7_1:61590007-61590026 | Msa1028540:intron | 35.0% | |
| TTCACACTTTATGACACCTT+AGG | - | chr7_1:61590026-61590045 | None:intergenic | 35.0% | |
| !! | AAAGTGCTTAAAGAGTGTCT+GGG | - | chr7_1:61590187-61590206 | None:intergenic | 35.0% |
| !! | TAAAGTGCTTAAAGAGTGTC+TGG | - | chr7_1:61590188-61590207 | None:intergenic | 35.0% |
| ! | TATAATTGGGATGATTTGCC+TGG | + | chr7_1:61590298-61590317 | Msa1028540:intron | 35.0% |
| ! | ATAATTGGGATGATTTGCCT+GGG | + | chr7_1:61590299-61590318 | Msa1028540:intron | 35.0% |
| ! | GTCATTGACATGAGTTTGTT+TGG | + | chr7_1:61590337-61590356 | Msa1028540:intron | 35.0% |
| ! | TGACATGAGTTTGTTTGGAT+AGG | + | chr7_1:61590342-61590361 | Msa1028540:intron | 35.0% |
| TCCCAGTTTCATATGACATA+CGG | + | chr7_1:61590403-61590422 | Msa1028540:intron | 35.0% | |
| ACCGTATGTCATATGAAACT+GGG | - | chr7_1:61590407-61590426 | None:intergenic | 35.0% | |
| TACCGTATGTCATATGAAAC+TGG | - | chr7_1:61590408-61590427 | None:intergenic | 35.0% | |
| GCTGATCATGCATTTAATGT+TGG | + | chr7_1:61590470-61590489 | Msa1028540:intron | 35.0% | |
| GCTCTAGTGTTAACTAGAAA+TGG | + | chr7_1:61590530-61590549 | Msa1028540:intron | 35.0% | |
| AAAAATGCCAACGTGACAAA+GGG | - | chr7_1:61590764-61590783 | None:intergenic | 35.0% | |
| AAAAAATGCCAACGTGACAA+AGG | - | chr7_1:61590765-61590784 | None:intergenic | 35.0% | |
| !!! | GTCTTTTGTTTTGTTGCAGT+TGG | + | chr7_1:61590793-61590812 | Msa1028540:intron | 35.0% |
| ACAGTTTCGTCTCATCTTAA+TGG | + | chr7_1:61590921-61590940 | Msa1028540:CDS | 35.0% | |
| ! | GCAGAGAAGTACATAAGTAA+TGG | - | chr7_1:61591024-61591043 | None:intergenic | 35.0% |
| TCAATGTCACAATTCAAGTC+TGG | + | chr7_1:61591082-61591101 | Msa1028540:CDS | 35.0% | |
| AGTCTTTAGCATTGCTTTAG+GGG | + | chr7_1:61591266-61591285 | Msa1028540:intron | 35.0% | |
| !! | TATTTGAGTTTTGCACCACA+AGG | + | chr7_1:61591443-61591462 | Msa1028540:CDS | 35.0% |
| !! | ATTTGAGTTTTGCACCACAA+GGG | + | chr7_1:61591444-61591463 | Msa1028540:CDS | 35.0% |
| TATTTAGCTGAACAAGAAGG+AGG | + | chr7_1:61591626-61591645 | Msa1028540:CDS | 35.0% | |
| TGCAAAGAGAAAGGGAAATA+AGG | - | chr7_1:61591724-61591743 | None:intergenic | 35.0% | |
| CTATGCTATGCAAAGAGAAA+GGG | - | chr7_1:61591732-61591751 | None:intergenic | 35.0% | |
| ATAGAACAAAAACTGGAGGT+CGG | - | chr7_1:61592070-61592089 | None:intergenic | 35.0% | |
| ACATGAATCCATCTATTGTC+AGG | + | chr7_1:61592141-61592160 | Msa1028540:CDS | 35.0% | |
| GCCTAAACTTTCACAATAGT+TGG | - | chr7_1:61592209-61592228 | None:intergenic | 35.0% | |
| TTGTGAAAGTTTAGGCTGAT+AGG | + | chr7_1:61592213-61592232 | Msa1028540:intron | 35.0% | |
| !! | GTTAAATTTTAGCGCAAGAC+AGG | - | chr7_1:61592337-61592356 | None:intergenic | 35.0% |
| GTTGGGTAACAACATATGAA+TGG | + | chr7_1:61592460-61592479 | Msa1028540:intron | 35.0% | |
| AACTTCAGTCCTTATTCTAC+TGG | - | chr7_1:61592559-61592578 | None:intergenic | 35.0% | |
| GCAATTAAAGCTGCTAAAGA+AGG | + | chr7_1:61592594-61592613 | Msa1028540:CDS | 35.0% | |
| !! | GGACTACCTATACTTTTTAC+AGG | + | chr7_1:61592615-61592634 | Msa1028540:CDS | 35.0% |
| !! | ACCTATACTTTTTACAGGAG+AGG | + | chr7_1:61592620-61592639 | Msa1028540:CDS | 35.0% |
| ! | ACCTCTCCTGTAAAAAGTAT+AGG | - | chr7_1:61592624-61592643 | None:intergenic | 35.0% |
| GAATCTCATCAAACATCCAT+GGG | - | chr7_1:61592942-61592961 | None:intergenic | 35.0% | |
| TGAATCTCATCAAACATCCA+TGG | - | chr7_1:61592943-61592962 | None:intergenic | 35.0% | |
| GTCCCAATTATATGACATTC+AGG | + | chr7_1:61593017-61593036 | Msa1028540:CDS | 35.0% | |
| !! | TCAGGCATTGAATAACAACA+AGG | + | chr7_1:61593035-61593054 | Msa1028540:CDS | 35.0% |
| AAATATAATGTGAGTGCGGA+GGG | - | chr7_1:61593066-61593085 | None:intergenic | 35.0% | |
| TAAATATAATGTGAGTGCGG+AGG | - | chr7_1:61593067-61593086 | None:intergenic | 35.0% | |
| ! | TGTGAATTTTAAGCTGTCGA+AGG | + | chr7_1:61593244-61593263 | Msa1028540:CDS | 35.0% |
| AAACAGCTTCTCAAATAGCT+GGG | + | chr7_1:61593267-61593286 | Msa1028540:CDS | 35.0% | |
| ACTAATGAGTTCATGCATTC+TGG | + | chr7_1:61593305-61593324 | Msa1028540:CDS | 35.0% | |
| CTAGGACATAAAACATTGGT+GGG | - | chr7_1:61593431-61593450 | None:intergenic | 35.0% | |
| AACGCTAGGACATAAAACAT+TGG | - | chr7_1:61593435-61593454 | None:intergenic | 35.0% | |
| AGTTCAAAAAACCAAAGGCT+AGG | - | chr7_1:61593459-61593478 | None:intergenic | 35.0% | |
| ! | GTGAGAAGAAAAGATAGTGG+TGG | - | chr7_1:61589317-61589336 | None:intergenic | 40.0% |
| GTGGTGAGAAGAAAAGATAG+TGG | - | chr7_1:61589320-61589339 | None:intergenic | 40.0% | |
| AGGATGAAATTGGAGCAATG+TGG | - | chr7_1:61589339-61589358 | None:intergenic | 40.0% | |
| AAGAGTGACGAGGATGAAAT+TGG | - | chr7_1:61589349-61589368 | None:intergenic | 40.0% | |
| !!! | TGAGGGGTTTTGAGAAAAGA+GGG | - | chr7_1:61589391-61589410 | None:intergenic | 40.0% |
| TGAATCTGTGATCACGAAGA+CGG | - | chr7_1:61589535-61589554 | None:intergenic | 40.0% | |
| TGATCTTAGTCGAAGACTGT+AGG | - | chr7_1:61589583-61589602 | None:intergenic | 40.0% | |
| ACAGTCTTCGACTAAGATCA+CGG | + | chr7_1:61589583-61589602 | Msa1028540:CDS | 40.0% | |
| GTGAGTTTGACAGAATCACA+TGG | + | chr7_1:61589874-61589893 | Msa1028540:intron | 40.0% | |
| !! | AAAGCTGCACTTTAGAGCTT+CGG | - | chr7_1:61589916-61589935 | None:intergenic | 40.0% |
| !!! | CCGCCAAAATTTTAACTGCT+TGG | + | chr7_1:61589957-61589976 | Msa1028540:intron | 40.0% |
| ! | GCCCCAAGCAGTTAAAATTT+TGG | - | chr7_1:61589963-61589982 | None:intergenic | 40.0% |
| !! | TTGGGGCTTTTTGTTACTTG+AGG | + | chr7_1:61589976-61589995 | Msa1028540:intron | 40.0% |
| AGATTATTCGAGTCCCTGTT+AGG | + | chr7_1:61590115-61590134 | Msa1028540:intron | 40.0% | |
| !! | AAGTGCTTAAAGAGTGTCTG+GGG | - | chr7_1:61590186-61590205 | None:intergenic | 40.0% |
| !! | ATGGCTTTGGATGGTATTAC+TGG | + | chr7_1:61590369-61590388 | Msa1028540:intron | 40.0% |
| ! | AATATCCTATGTTTCGGTGC+TGG | + | chr7_1:61590493-61590512 | Msa1028540:intron | 40.0% |
| TCTCTATGATTCTGGACTTG+AGG | - | chr7_1:61590585-61590604 | None:intergenic | 40.0% | |
| CTATGTGGCTGATCAAAAAC+TGG | - | chr7_1:61590665-61590684 | None:intergenic | 40.0% | |
| AAAATGCCAACGTGACAAAG+GGG | - | chr7_1:61590763-61590782 | None:intergenic | 40.0% | |
| !! | TATTTTTGCAAGGTGGTCCT+GGG | + | chr7_1:61590845-61590864 | Msa1028540:CDS | 40.0% |
| ATCCATCCACTAGATTCAGT+TGG | - | chr7_1:61590886-61590905 | None:intergenic | 40.0% | |
| !! | ATGGACCAGGCATGTTTTTA+TGG | + | chr7_1:61590940-61590959 | Msa1028540:intron | 40.0% |
| AGTGTCCATAAAAACATGCC+TGG | - | chr7_1:61590948-61590967 | None:intergenic | 40.0% | |
| ! | GACATTGATGACACAGACAA+AGG | - | chr7_1:61591070-61591089 | None:intergenic | 40.0% |
| !! | TTTCTTGATTTGTGAGCACG+TGG | + | chr7_1:61591297-61591316 | Msa1028540:intron | 40.0% |
| AAATTATGGCAGAGTTACGG+TGG | + | chr7_1:61591404-61591423 | Msa1028540:intron | 40.0% | |
| GTACTACAAAAGATACCCTC+AGG | + | chr7_1:61591574-61591593 | Msa1028540:CDS | 40.0% | |
| CCTATGCTATGCAAAGAGAA+AGG | - | chr7_1:61591733-61591752 | None:intergenic | 40.0% | |
| CCTTTCTCTTTGCATAGCAT+AGG | + | chr7_1:61591730-61591749 | Msa1028540:intron | 40.0% | |
| TTCTCTTTGCATAGCATAGG+TGG | + | chr7_1:61591733-61591752 | Msa1028540:intron | 40.0% | |
| ACACTCTCTCAAACCTAGAA+AGG | - | chr7_1:61591932-61591951 | None:intergenic | 40.0% | |
| TTTCTAGGTTTGAGAGAGTG+TGG | + | chr7_1:61591931-61591950 | Msa1028540:intron | 40.0% | |
| ! | TTCTAGGTTTGAGAGAGTGT+GGG | + | chr7_1:61591932-61591951 | Msa1028540:intron | 40.0% |
| CTTATTCTCTTAGGTGATCC+CGG | - | chr7_1:61591972-61591991 | None:intergenic | 40.0% | |
| CTGCATAGAACAAAAACTGG+AGG | - | chr7_1:61592074-61592093 | None:intergenic | 40.0% | |
| ! | TCATGTAGAAGAGCATACAG+TGG | - | chr7_1:61592127-61592146 | None:intergenic | 40.0% |
| TCATGACAAATGCATACACG+AGG | - | chr7_1:61592185-61592204 | None:intergenic | 40.0% | |
| ATGTCCCTGATGTAACTAAG+AGG | + | chr7_1:61592277-61592296 | Msa1028540:intron | 40.0% | |
| TGTCCCTGATGTAACTAAGA+GGG | + | chr7_1:61592278-61592297 | Msa1028540:intron | 40.0% | |
| AAGCCCTCTTAGTTACATCA+GGG | - | chr7_1:61592284-61592303 | None:intergenic | 40.0% | |
| GAGCATCAAAGATTGAACTC+TGG | + | chr7_1:61592375-61592394 | Msa1028540:intron | 40.0% | |
| AGATTGAACTCTGGATCACT+TGG | + | chr7_1:61592384-61592403 | Msa1028540:intron | 40.0% | |
| ! | CAAGTAGTTGGTTCATGACA+TGG | - | chr7_1:61592427-61592446 | None:intergenic | 40.0% |
| TGCAATTGCAGAGACATGAA+AGG | - | chr7_1:61592812-61592831 | None:intergenic | 40.0% | |
| TCATATACTGTCCGAGAAGA+AGG | + | chr7_1:61592990-61593009 | Msa1028540:CDS | 40.0% | |
| GAAACAGCTTCTCAAATAGC+TGG | + | chr7_1:61593266-61593285 | Msa1028540:CDS | 40.0% | |
| CATAAAACATTGGTGGGACT+GGG | - | chr7_1:61593425-61593444 | None:intergenic | 40.0% | |
| ACATAAAACATTGGTGGGAC+TGG | - | chr7_1:61593426-61593445 | None:intergenic | 40.0% | |
| GCTAGGACATAAAACATTGG+TGG | - | chr7_1:61593432-61593451 | None:intergenic | 40.0% | |
| AAAACGCGAAAAGAGTGACG+AGG | - | chr7_1:61589359-61589378 | None:intergenic | 45.0% | |
| !!! | CTGAGGGGTTTTGAGAAAAG+AGG | - | chr7_1:61589392-61589411 | None:intergenic | 45.0% |
| TCATTGGAATGCGTGAGCTT+CGG | - | chr7_1:61589430-61589449 | None:intergenic | 45.0% | |
| AGCTCACGCATTCCAATGAA+CGG | + | chr7_1:61589431-61589450 | Msa1028540:CDS | 45.0% | |
| ! | TGCAGCTTTTGTCAAAACCC+TGG | + | chr7_1:61589927-61589946 | Msa1028540:intron | 45.0% |
| ! | CTTTTGTCAAAACCCTGGTG+CGG | + | chr7_1:61589932-61589951 | Msa1028540:intron | 45.0% |
| CTTTATGACACCTTAGGCCT+TGG | - | chr7_1:61590020-61590039 | None:intergenic | 45.0% | |
| !! | AGTGCTTAAAGAGTGTCTGG+GGG | - | chr7_1:61590185-61590204 | None:intergenic | 45.0% |
| GTTTGTTTGGATAGGCGACA+TGG | + | chr7_1:61590350-61590369 | Msa1028540:intron | 45.0% | |
| AAATGCCAACGTGACAAAGG+GGG | - | chr7_1:61590762-61590781 | None:intergenic | 45.0% | |
| !!! | CTATTTTTGCAAGGTGGTCC+TGG | + | chr7_1:61590844-61590863 | Msa1028540:CDS | 45.0% |
| !! | CACTAGATTCAGTTGGTGGT+CGG | - | chr7_1:61590879-61590898 | None:intergenic | 45.0% |
| CATCCACTAGATTCAGTTGG+TGG | - | chr7_1:61590883-61590902 | None:intergenic | 45.0% | |
| CACCAACTGAATCTAGTGGA+TGG | + | chr7_1:61590881-61590900 | Msa1028540:CDS | 45.0% | |
| ! | TCGTCTCATCTTAATGGACC+AGG | + | chr7_1:61590927-61590946 | Msa1028540:CDS | 45.0% |
| TTATGTACTTCTCTGCAGCG+AGG | + | chr7_1:61591028-61591047 | Msa1028540:intron | 45.0% | |
| GTCACAATTCAAGTCTGGAG+AGG | + | chr7_1:61591087-61591106 | Msa1028540:CDS | 45.0% | |
| ! | AAGGTCCAGCATTTGGAACA+AGG | - | chr7_1:61591183-61591202 | None:intergenic | 45.0% |
| TTGTTCCAAATGCTGGACCT+TGG | + | chr7_1:61591182-61591201 | Msa1028540:CDS | 45.0% | |
| ATTGTCCAAGGTCCAGCATT+TGG | - | chr7_1:61591190-61591209 | None:intergenic | 45.0% | |
| ! | TGCTGGACCTTGGACAATTT+TGG | + | chr7_1:61591192-61591211 | Msa1028540:CDS | 45.0% |
| ! | GCTGGACCTTGGACAATTTT+GGG | + | chr7_1:61591193-61591212 | Msa1028540:CDS | 45.0% |
| ! | CTGGACCTTGGACAATTTTG+GGG | + | chr7_1:61591194-61591213 | Msa1028540:CDS | 45.0% |
| !! | CAAGGTTACATTGGCTTCGA+GGG | - | chr7_1:61591347-61591366 | None:intergenic | 45.0% |
| !! | TCAAGGTTACATTGGCTTCG+AGG | - | chr7_1:61591348-61591367 | None:intergenic | 45.0% |
| TCCTATTGGAGGAATTCCAC+CGG | - | chr7_1:61591489-61591508 | None:intergenic | 45.0% | |
| GGAATTCCTCCAATAGGACA+TGG | + | chr7_1:61591491-61591510 | Msa1028540:CDS | 45.0% | |
| TTAGCTGAACAAGAAGGAGG+AGG | + | chr7_1:61591629-61591648 | Msa1028540:CDS | 45.0% | |
| TAGCTGAACAAGAAGGAGGA+GGG | + | chr7_1:61591630-61591649 | Msa1028540:CDS | 45.0% | |
| ! | GTGGGATCCTACTTTAGTTC+CGG | + | chr7_1:61591950-61591969 | Msa1028540:CDS | 45.0% |
| ! | TGGGATCCTACTTTAGTTCC+GGG | + | chr7_1:61591951-61591970 | Msa1028540:CDS | 45.0% |
| !! | ACTGGAGGTCGGTTTTCAAA+AGG | - | chr7_1:61592059-61592078 | None:intergenic | 45.0% |
| CAAGCCCTCTTAGTTACATC+AGG | - | chr7_1:61592285-61592304 | None:intergenic | 45.0% | |
| GATGGTCTGCCAGTAGAATA+AGG | + | chr7_1:61592547-61592566 | Msa1028540:CDS | 45.0% | |
| CATGTCTCTGCAATTGCAGT+CGG | + | chr7_1:61592814-61592833 | Msa1028540:intron | 45.0% | |
| TACTGTCCGAGAAGAAGGAT+TGG | + | chr7_1:61592995-61593014 | Msa1028540:CDS | 45.0% | |
| TTGGGACCAATCCTTCTTCT+CGG | - | chr7_1:61593004-61593023 | None:intergenic | 45.0% | |
| TAATAAACGGCAGCTGCAAC+AGG | - | chr7_1:61593212-61593231 | None:intergenic | 45.0% | |
| CTTCTCAAATAGCTGGGATC+AGG | + | chr7_1:61593273-61593292 | Msa1028540:CDS | 45.0% | |
| AAATAGCTGGGATCAGGCTA+TGG | + | chr7_1:61593279-61593298 | Msa1028540:CDS | 45.0% | |
| CTGGGAGAGAAGAGTAACAA+TGG | - | chr7_1:61593407-61593426 | None:intergenic | 45.0% | |
| TGAGAAAGGGAGAGTCTGAG+GGG | - | chr7_1:61589407-61589426 | None:intergenic | 50.0% | |
| GTGAGAAAGGGAGAGTCTGA+GGG | - | chr7_1:61589408-61589427 | None:intergenic | 50.0% | |
| GCGATGGTAAGTCCGTTCAT+TGG | - | chr7_1:61589446-61589465 | None:intergenic | 50.0% | |
| AGGTACGGAGAACCAATCTC+CGG | - | chr7_1:61589507-61589526 | None:intergenic | 50.0% | |
| ACGAAGACGGAGTGAAGGTA+CGG | - | chr7_1:61589522-61589541 | None:intergenic | 50.0% | |
| TGATCACGAAGACGGAGTGA+AGG | - | chr7_1:61589527-61589546 | None:intergenic | 50.0% | |
| GTCCCTCTCGATTACTCTCA+AGG | + | chr7_1:61589557-61589576 | Msa1028540:CDS | 50.0% | |
| GGCCTTGAGAGTAATCGAGA+GGG | - | chr7_1:61589562-61589581 | None:intergenic | 50.0% | |
| AGGCCTTGAGAGTAATCGAG+AGG | - | chr7_1:61589563-61589582 | None:intergenic | 50.0% | |
| TTCGCTCGTGAAGTTGTTGC+AGG | + | chr7_1:61589608-61589627 | Msa1028540:CDS | 50.0% | |
| ! | GACAGAATCACATGGTGCCA+AGG | + | chr7_1:61589882-61589901 | Msa1028540:intron | 50.0% |
| GAGCTTCGGCAAAATCACCT+TGG | - | chr7_1:61589902-61589921 | None:intergenic | 50.0% | |
| !! | GGGATCCTTAAAGAGTGCCT+CGG | + | chr7_1:61590242-61590261 | Msa1028540:intron | 50.0% |
| !! | GGATCCTTAAAGAGTGCCTC+GGG | + | chr7_1:61590243-61590262 | Msa1028540:intron | 50.0% |
| !! | GATCCTTAAAGAGTGCCTCG+GGG | + | chr7_1:61590244-61590263 | Msa1028540:intron | 50.0% |
| !! | ATCCTTAAAGAGTGCCTCGG+GGG | + | chr7_1:61590245-61590264 | Msa1028540:intron | 50.0% |
| TATATATACGAGTGCCCCCG+AGG | - | chr7_1:61590262-61590281 | None:intergenic | 50.0% | |
| ATTTGCCTGGGATGAGGACA+TGG | + | chr7_1:61590311-61590330 | Msa1028540:intron | 50.0% | |
| TTGGATAGGCGACATGGCTT+TGG | + | chr7_1:61590356-61590375 | Msa1028540:intron | 50.0% | |
| !! | ATAGGCGACATGGCTTTGGA+TGG | + | chr7_1:61590360-61590379 | Msa1028540:intron | 50.0% |
| ! | GTTTGCCAGCACCGAAACAT+AGG | - | chr7_1:61590501-61590520 | None:intergenic | 50.0% |
| AGCACAAGTGCTCATCCATC+AGG | - | chr7_1:61590724-61590743 | None:intergenic | 50.0% | |
| AATCACCCCCTTTGTCACGT+TGG | + | chr7_1:61590754-61590773 | Msa1028540:intron | 50.0% | |
| CGACCACCAACTGAATCTAG+TGG | + | chr7_1:61590877-61590896 | Msa1028540:CDS | 50.0% | |
| ! | GTTCGCCTTGTTCCAAATGC+TGG | + | chr7_1:61591175-61591194 | Msa1028540:CDS | 50.0% |
| !!! | ACCTTGGACAATTTTGGGGC+AGG | + | chr7_1:61591198-61591217 | Msa1028540:CDS | 50.0% |
| ACCTGCCCCAAAATTGTCCA+AGG | - | chr7_1:61591202-61591221 | None:intergenic | 50.0% | |
| AGGAATTCCACCGGTCAGAA+GGG | - | chr7_1:61591480-61591499 | None:intergenic | 50.0% | |
| ACCGGTGGAATTCCTCCAAT+AGG | + | chr7_1:61591485-61591504 | Msa1028540:CDS | 50.0% | |
| GTGCATCCATGTCCTATTGG+AGG | - | chr7_1:61591500-61591519 | None:intergenic | 50.0% | |
| GCAGTGCATCCATGTCCTAT+TGG | - | chr7_1:61591503-61591522 | None:intergenic | 50.0% | |
| AGCTGAACAAGAAGGAGGAG+GGG | + | chr7_1:61591631-61591650 | Msa1028540:CDS | 50.0% | |
| TAAGATGCCCCCAGAAGGAA+GGG | - | chr7_1:61591759-61591778 | None:intergenic | 50.0% | |
| TTAAGATGCCCCCAGAAGGA+AGG | - | chr7_1:61591760-61591779 | None:intergenic | 50.0% | |
| ! | ACTCTTGGTCTCTCTGGCTT+AGG | + | chr7_1:61591797-61591816 | Msa1028540:CDS | 50.0% |
| GGTGATCCCGGAACTAAAGT+AGG | - | chr7_1:61591960-61591979 | None:intergenic | 50.0% | |
| TTGTTCTCCCTTGACACTGC+AGG | + | chr7_1:61592512-61592531 | Msa1028540:intron | 50.0% | |
| TGTTCTCCCTTGACACTGCA+GGG | + | chr7_1:61592513-61592532 | Msa1028540:intron | 50.0% | |
| TGCAGGGTTCTGCTAGTAGA+TGG | + | chr7_1:61592529-61592548 | Msa1028540:intron | 50.0% | |
| TTGGCTCAGCTTCGCATATG+TGG | - | chr7_1:61592745-61592764 | None:intergenic | 50.0% | |
| ! | CAATTGCAGTCGGCTTATGC+AGG | + | chr7_1:61592824-61592843 | Msa1028540:intron | 50.0% |
| !! | CATTCTGGCTTGCGTGATGA+CGG | + | chr7_1:61593320-61593339 | Msa1028540:CDS | 50.0% |
| !! | ATTCTGGCTTGCGTGATGAC+GGG | + | chr7_1:61593321-61593340 | Msa1028540:CDS | 50.0% |
| GGTGAGAAAGGGAGAGTCTG+AGG | - | chr7_1:61589409-61589428 | None:intergenic | 55.0% | |
| GCGTGAGCTTCGGTGAGAAA+GGG | - | chr7_1:61589420-61589439 | None:intergenic | 55.0% | |
| TGCGTGAGCTTCGGTGAGAA+AGG | - | chr7_1:61589421-61589440 | None:intergenic | 55.0% | |
| CAATCTCCGGTGACATGCTC+CGG | - | chr7_1:61589494-61589513 | None:intergenic | 55.0% | |
| !! | ATTTTGGCGGAACCGCACCA+GGG | - | chr7_1:61589947-61589966 | None:intergenic | 55.0% |
| !! | AATTTTGGCGGAACCGCACC+AGG | - | chr7_1:61589948-61589967 | None:intergenic | 55.0% |
| ! | GGGATGATTTGCCTGGGATG+AGG | + | chr7_1:61590305-61590324 | Msa1028540:intron | 55.0% |
| ACTTCTCTGCAGCGAGGAAC+AGG | + | chr7_1:61591034-61591053 | Msa1028540:intron | 55.0% | |
| GAGGAATTCCACCGGTCAGA+AGG | - | chr7_1:61591481-61591500 | None:intergenic | 55.0% | |
| CATAGGTGGCCCTTCCTTCT+GGG | + | chr7_1:61591747-61591766 | Msa1028540:intron | 55.0% | |
| ATAGGTGGCCCTTCCTTCTG+GGG | + | chr7_1:61591748-61591767 | Msa1028540:intron | 55.0% | |
| ! | GGGGCATCTTAACCCCAAGA+GGG | + | chr7_1:61591768-61591787 | Msa1028540:CDS | 55.0% |
| AAGAGTCTGCAGCCCTCTTG+GGG | - | chr7_1:61591783-61591802 | None:intergenic | 55.0% | |
| CAAGAGTCTGCAGCCCTCTT+GGG | - | chr7_1:61591784-61591803 | None:intergenic | 55.0% | |
| CTGCAGACTCTTGGTCTCTC+TGG | + | chr7_1:61591791-61591810 | Msa1028540:CDS | 55.0% | |
| ! | GGTCTCTCTGGCTTAGGATC+TGG | + | chr7_1:61591803-61591822 | Msa1028540:CDS | 55.0% |
| ! | TCTGGCTTAGGATCTGGAGC+TGG | + | chr7_1:61591809-61591828 | Msa1028540:CDS | 55.0% |
| TCTGGATCACTTGGTCGCAG+AGG | + | chr7_1:61592393-61592412 | Msa1028540:intron | 55.0% | |
| GCAGAACCCTGCAGTGTCAA+GGG | - | chr7_1:61592522-61592541 | None:intergenic | 55.0% | |
| AGCAGAACCCTGCAGTGTCA+AGG | - | chr7_1:61592523-61592542 | None:intergenic | 55.0% | |
| !! | TTCTGGCTTGCGTGATGACG+GGG | + | chr7_1:61593322-61593341 | Msa1028540:CDS | 55.0% |
| ! | TCCTAGCGTTGCCTAGCCTT+TGG | + | chr7_1:61593445-61593464 | Msa1028540:three_prime_UTR | 55.0% |
| ACCAAAGGCTAGGCAACGCT+AGG | - | chr7_1:61593449-61593468 | None:intergenic | 55.0% | |
| CGGAGCATGTCACCGGAGAT+TGG | + | chr7_1:61589492-61589511 | Msa1028540:CDS | 60.0% | |
| ! | TGCCCCCGAGGCACTCTTTA+AGG | - | chr7_1:61590250-61590269 | None:intergenic | 60.0% |
| ACCTGCCATGTCCTCATCCC+AGG | - | chr7_1:61590319-61590338 | None:intergenic | 60.0% | |
| CTGACGCAAGCCCTTCTGAC+CGG | + | chr7_1:61591467-61591486 | Msa1028540:CDS | 60.0% | |
| GCATAGGTGGCCCTTCCTTC+TGG | + | chr7_1:61591746-61591765 | Msa1028540:intron | 60.0% | |
| TAGGTGGCCCTTCCTTCTGG+GGG | + | chr7_1:61591749-61591768 | Msa1028540:intron | 60.0% | |
| GGGGTTAAGATGCCCCCAGA+AGG | - | chr7_1:61591764-61591783 | None:intergenic | 60.0% | |
| !! | GGGGGCATCTTAACCCCAAG+AGG | + | chr7_1:61591767-61591786 | Msa1028540:CDS | 60.0% |
| CCAAGAGTCTGCAGCCCTCT+TGG | - | chr7_1:61591785-61591804 | None:intergenic | 60.0% | |
| CCAAGAGGGCTGCAGACTCT+TGG | + | chr7_1:61591782-61591801 | Msa1028540:CDS | 60.0% | |
| !! | TCTGGCTTGCGTGATGACGG+GGG | + | chr7_1:61593323-61593342 | Msa1028540:CDS | 60.0% |
| CGAGGAGGTGGAGGAGGAGA+CGG | - | chr7_1:61589471-61589490 | None:intergenic | 65.0% | |
| TCCTCGCCGGAGCATGTCAC+CGG | + | chr7_1:61589485-61589504 | Msa1028540:CDS | 65.0% | |
| GCCTGGGATGAGGACATGGC+AGG | + | chr7_1:61590315-61590334 | Msa1028540:intron | 65.0% | |
| GGTGGTCGGCACTCATACCC+AGG | - | chr7_1:61590865-61590884 | None:intergenic | 65.0% | |
| AGGGCTTGCGTCAGCCCTTG+TGG | - | chr7_1:61591461-61591480 | None:intergenic | 65.0% | |
| ACGCAAGCCCTTCTGACCGG+TGG | + | chr7_1:61591470-61591489 | Msa1028540:CDS | 65.0% | |
| GGAGGAGGAGACGGTGGCGA+TGG | - | chr7_1:61589462-61589481 | None:intergenic | 70.0% | |
| GGAGGTGGAGGAGGAGACGG+TGG | - | chr7_1:61589468-61589487 | None:intergenic | 70.0% | |
| CTCCTCCTCCACCTCCTCGC+CGG | + | chr7_1:61589472-61589491 | Msa1028540:CDS | 70.0% | |
| ATGCTCCGGCGAGGAGGTGG+AGG | - | chr7_1:61589480-61589499 | None:intergenic | 70.0% | |
| GACATGCTCCGGCGAGGAGG+TGG | - | chr7_1:61589483-61589502 | None:intergenic | 70.0% | |
| GGTGACATGCTCCGGCGAGG+AGG | - | chr7_1:61589486-61589505 | None:intergenic | 70.0% | |
| TCCGGTGACATGCTCCGGCG+AGG | - | chr7_1:61589489-61589508 | None:intergenic | 70.0% | |
| CTCCGGCGAGGAGGTGGAGG+AGG | - | chr7_1:61589477-61589496 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 61589207 | 61593672 | 61589207 | ID=Msa1028540;Name=Msa1028540 |
| chr7_1 | mRNA | 61589207 | 61593672 | 61589207 | ID=Msa1028540-mRNA-1;Parent=Msa1028540;Name=Msa1028540-mRNA-1;_AED=0.08;_eAED=0.08;_QI=89|1|1|1|1|1|10|272|517 |
| chr7_1 | exon | 61589207 | 61589629 | 61589207 | ID=Msa1028540-mRNA-1:exon:12961;Parent=Msa1028540-mRNA-1 |
| chr7_1 | exon | 61590812 | 61590948 | 61590812 | ID=Msa1028540-mRNA-1:exon:12962;Parent=Msa1028540-mRNA-1 |
| chr7_1 | exon | 61591046 | 61591219 | 61591046 | ID=Msa1028540-mRNA-1:exon:12963;Parent=Msa1028540-mRNA-1 |
| chr7_1 | exon | 61591416 | 61591652 | 61591416 | ID=Msa1028540-mRNA-1:exon:12964;Parent=Msa1028540-mRNA-1 |
| chr7_1 | exon | 61591752 | 61591852 | 61591752 | ID=Msa1028540-mRNA-1:exon:12965;Parent=Msa1028540-mRNA-1 |
| chr7_1 | exon | 61591938 | 61592010 | 61591938 | ID=Msa1028540-mRNA-1:exon:12966;Parent=Msa1028540-mRNA-1 |
| chr7_1 | exon | 61592094 | 61592162 | 61592094 | ID=Msa1028540-mRNA-1:exon:12967;Parent=Msa1028540-mRNA-1 |
| chr7_1 | exon | 61592534 | 61592641 | 61592534 | ID=Msa1028540-mRNA-1:exon:12968;Parent=Msa1028540-mRNA-1 |
| chr7_1 | exon | 61592931 | 61593056 | 61592931 | ID=Msa1028540-mRNA-1:exon:12969;Parent=Msa1028540-mRNA-1 |
| chr7_1 | exon | 61593206 | 61593672 | 61593206 | ID=Msa1028540-mRNA-1:exon:12970;Parent=Msa1028540-mRNA-1 |
| chr7_1 | five_prime_UTR | 61589207 | 61589295 | 61589207 | ID=Msa1028540-mRNA-1:five_prime_utr;Parent=Msa1028540-mRNA-1 |
| chr7_1 | CDS | 61589296 | 61589629 | 61589296 | ID=Msa1028540-mRNA-1:cds;Parent=Msa1028540-mRNA-1 |
| chr7_1 | CDS | 61590812 | 61590948 | 61590812 | ID=Msa1028540-mRNA-1:cds;Parent=Msa1028540-mRNA-1 |
| chr7_1 | CDS | 61591046 | 61591219 | 61591046 | ID=Msa1028540-mRNA-1:cds;Parent=Msa1028540-mRNA-1 |
| chr7_1 | CDS | 61591416 | 61591652 | 61591416 | ID=Msa1028540-mRNA-1:cds;Parent=Msa1028540-mRNA-1 |
| chr7_1 | CDS | 61591752 | 61591852 | 61591752 | ID=Msa1028540-mRNA-1:cds;Parent=Msa1028540-mRNA-1 |
| chr7_1 | CDS | 61591938 | 61592010 | 61591938 | ID=Msa1028540-mRNA-1:cds;Parent=Msa1028540-mRNA-1 |
| chr7_1 | CDS | 61592094 | 61592162 | 61592094 | ID=Msa1028540-mRNA-1:cds;Parent=Msa1028540-mRNA-1 |
| chr7_1 | CDS | 61592534 | 61592641 | 61592534 | ID=Msa1028540-mRNA-1:cds;Parent=Msa1028540-mRNA-1 |
| chr7_1 | CDS | 61592931 | 61593056 | 61592931 | ID=Msa1028540-mRNA-1:cds;Parent=Msa1028540-mRNA-1 |
| chr7_1 | CDS | 61593206 | 61593400 | 61593206 | ID=Msa1028540-mRNA-1:cds;Parent=Msa1028540-mRNA-1 |
| chr7_1 | three_prime_UTR | 61593401 | 61593672 | 61593401 | ID=Msa1028540-mRNA-1:three_prime_utr;Parent=Msa1028540-mRNA-1 |
| Gene Sequence |
| Protein sequence |
