Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1067590 | XP_003624080.1 | 95.164 | 517 | 25 | 0 | 1 | 517 | 1 | 517 | 0.0 | 993 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1067590 | sp|P46547|PIP_AERSO | 43.722 | 446 | 225 | 10 | 64 | 509 | 2 | 421 | 3.08e-121 | 365 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1067590 | G7L6P1 | 95.164 | 517 | 25 | 0 | 1 | 517 | 1 | 517 | 0.0 | 993 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0637930 | Msa1067590 | 0.800880 | 1.171120e-48 | -8.615850e-47 |
| Msa0828590 | Msa1067590 | -0.806458 | 8.146364e-50 | -8.615850e-47 |
| Msa0403480 | Msa1067590 | 0.815000 | 1.156875e-51 | -8.615850e-47 |
| Msa0982090 | Msa1067590 | 0.846137 | 2.623112e-59 | -8.615850e-47 |
| Msa1028540 | Msa1067590 | 0.865942 | 4.093932e-65 | -8.615850e-47 |
| Msa1067590 | Msa1112960 | 0.887655 | 1.178880e-72 | -8.615850e-47 |
| Msa1067590 | Msa1128280 | -0.800629 | 1.317499e-48 | -8.615850e-47 |
| Msa1067590 | Msa1364350 | 0.815369 | 9.578815e-52 | -8.615850e-47 |
| Msa1067590 | Msa1382380 | 0.846194 | 2.531557e-59 | -8.615850e-47 |
| Msa0576120 | Msa1067590 | 0.804044 | 2.609748e-49 | -8.615850e-47 |
| Msa0881530 | Msa1067590 | 0.844103 | 9.299515e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1067590 | MtrunA17_Chr7g0248701 | 95.164 | 517 | 25 | 0 | 1 | 517 | 1 | 517 | 0.0 | 993 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1067590 | AT3G61540.1 | 74.398 | 457 | 114 | 1 | 61 | 517 | 62 | 515 | 0.0 | 723 |
Find 140 sgRNAs with CRISPR-Local
Find 326 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTGGACCTTGGACAATTT+TGG | 0.126771 | 7_2:+62348427 | Msa1067590:CDS |
| GCATAGGTGGCCCTTCCTTC+TGG | 0.157533 | 7_2:+62348992 | Msa1067590:intron |
| ATGCCTGAATGTCATATAAT+TGG | 0.164206 | 7_2:-62350266 | None:intergenic |
| AATTATTAATTATTTATTAA+TGG | 0.174487 | 7_2:+62350876 | Msa1067590:three_prime_UTR |
| ACAGTTTCGTCTCATCTTAA+TGG | 0.216029 | 7_2:+62348156 | Msa1067590:CDS |
| ACTAATGAGTTCATGCATTC+TGG | 0.269501 | 7_2:+62350551 | Msa1067590:CDS |
| ATTTCAGCAAATATAATAAT+AGG | 0.272494 | 7_2:-62350780 | None:intergenic |
| CATAGGTGGCCCTTCCTTCT+GGG | 0.305590 | 7_2:+62348993 | Msa1067590:intron |
| GTCCCAATTATATGACATTC+AGG | 0.308263 | 7_2:+62350263 | Msa1067590:CDS |
| AAGAGCGACGAGGATGAAAT+TGG | 0.312770 | 7_2:-62346567 | None:intergenic |
| GTGGGATCCTACTTTAGTTC+CGG | 0.328918 | 7_2:+62349196 | Msa1067590:CDS |
| AAGTAGTGACTTATTCTCTT+AGG | 0.335186 | 7_2:-62349224 | None:intergenic |
| ATTGTCCAAGGTCCAGCATT+TGG | 0.342399 | 7_2:-62348422 | None:intergenic |
| CAAGAGTCTGCAGCCCTCTT+GGG | 0.345042 | 7_2:-62349027 | None:intergenic |
| CCAAGAGTCTGCAGCCCTCT+TGG | 0.358001 | 7_2:-62349028 | None:intergenic |
| GGTCTCTCTGGCTTAGGATC+TGG | 0.360506 | 7_2:+62349049 | Msa1067590:CDS |
| TGGGATCCTACTTTAGTTCC+GGG | 0.370052 | 7_2:+62349197 | Msa1067590:CDS |
| GATGGTCTGCCAGTAGAATA+AGG | 0.370734 | 7_2:+62349793 | Msa1067590:CDS |
| CAAAGTTCTTGATCATTTGT+TGG | 0.375660 | 7_2:+62350592 | Msa1067590:CDS |
| TCCTAGCGTTGCCTAGCCTT+TGG | 0.377305 | 7_2:+62350691 | Msa1067590:three_prime_UTR |
| CTGCAGACTCTTGGTCTCTC+TGG | 0.384271 | 7_2:+62349037 | Msa1067590:CDS |
| TTCGCTCGTGAAGTTGTTGC+AGG | 0.393688 | 7_2:+62346829 | Msa1067590:CDS |
| TACATCTTTGAATGGTTTCA+AGG | 0.395179 | 7_2:-62350211 | None:intergenic |
| GCAGTGCATCCATGTCCTAT+TGG | 0.395461 | 7_2:-62348746 | None:intergenic |
| CATTTGTTGGGAATGTTAAA+CGG | 0.404860 | 7_2:+62350605 | Msa1067590:CDS |
| AAAGTTCTTGATCATTTGTT+GGG | 0.410247 | 7_2:+62350593 | Msa1067590:CDS |
| ACATAAAACATTGGTGGGAC+TGG | 0.418718 | 7_2:-62350669 | None:intergenic |
| ACTTCTCTGCAGCGAGGAAC+AGG | 0.422644 | 7_2:+62348269 | Msa1067590:intron |
| AACTTCAGTCCTTATTCTAC+TGG | 0.423287 | 7_2:-62349802 | None:intergenic |
| GTTCGCCTTGTTCCAAATGC+TGG | 0.428426 | 7_2:+62348410 | Msa1067590:CDS |
| ACTCTTGGTCTCTCTGGCTT+AGG | 0.428598 | 7_2:+62349043 | Msa1067590:CDS |
| CAATCTCCGGTGACATGCTC+CGG | 0.430327 | 7_2:-62346712 | None:intergenic |
| CCAAGAGGGCTGCAGACTCT+TGG | 0.439564 | 7_2:+62349028 | Msa1067590:CDS |
| TAATAAACGGCAGCTGCAAC+AGG | 0.439828 | 7_2:-62350455 | None:intergenic |
| GACATGCTCCGGCGAGGAGG+TGG | 0.441501 | 7_2:-62346701 | None:intergenic |
| GAAACAGCTTCTCAAATAGC+TGG | 0.441550 | 7_2:+62350512 | Msa1067590:CDS |
| ATACATGTCTTCATAATAAA+CGG | 0.444263 | 7_2:-62350468 | None:intergenic |
| TTGGGACCAATCCTTCTTCT+CGG | 0.448445 | 7_2:-62350247 | None:intergenic |
| ATTCTGGCTTGCGTGATGAC+GGG | 0.451939 | 7_2:+62350567 | Msa1067590:CDS |
| TGCGTGAGCTTCGGTGAGAA+AGG | 0.454517 | 7_2:-62346639 | None:intergenic |
| TCATTGGAATGCGTGAGCTT+CGG | 0.455215 | 7_2:-62346648 | None:intergenic |
| TGCCTGAATGTCATATAATT+GGG | 0.462537 | 7_2:-62350265 | None:intergenic |
| ATGCTCCGGCGAGGAGGTGG+AGG | 0.463493 | 7_2:-62346698 | None:intergenic |
| CTCCGGCGAGGAGGTGGAGG+AGG | 0.463882 | 7_2:-62346695 | None:intergenic |
| ATATGAGCTACATCTTTGAA+TGG | 0.468347 | 7_2:-62350219 | None:intergenic |
| CGGAGCATGTCACCGGAGAT+TGG | 0.471151 | 7_2:+62346713 | Msa1067590:CDS |
| TCATATACTGTCCGAGAAGA+AGG | 0.473550 | 7_2:+62350236 | Msa1067590:CDS |
| GCAATTAAAGCTGCTAAAGA+AGG | 0.476169 | 7_2:+62349840 | Msa1067590:CDS |
| ATATTTGCTGAAATAATGTC+AGG | 0.476978 | 7_2:+62350789 | Msa1067590:three_prime_UTR |
| TTTAAATTATGGCAGAGTTA+CGG | 0.478103 | 7_2:+62348647 | Msa1067590:intron |
| TCAATGTCACAATTCAAGTC+TGG | 0.485879 | 7_2:+62348317 | Msa1067590:CDS |
| CTTCTCAAATAGCTGGGATC+AGG | 0.486016 | 7_2:+62350519 | Msa1067590:CDS |
| AACAATGGTGATCAAAATAG+AGG | 0.490017 | 7_2:-62350635 | None:intergenic |
| CTCCTCCTCCACCTCCTCGC+CGG | 0.492725 | 7_2:+62346693 | Msa1067590:CDS |
| ACATGAATCCATCTATTGTC+AGG | 0.493822 | 7_2:+62349387 | Msa1067590:CDS |
| CATTCTGGCTTGCGTGATGA+CGG | 0.495763 | 7_2:+62350566 | Msa1067590:CDS |
| TCTGGCTTAGGATCTGGAGC+TGG | 0.499369 | 7_2:+62349055 | Msa1067590:CDS |
| CTTATTCTCTTAGGTGATCC+CGG | 0.501387 | 7_2:-62349215 | None:intergenic |
| ACCGGTGGAATTCCTCCAAT+AGG | 0.501435 | 7_2:+62348731 | Msa1067590:CDS |
| TCCTCGCCGGAGCATGTCAC+CGG | 0.504160 | 7_2:+62346706 | Msa1067590:CDS |
| GAGGAATTCCACCGGTCAGA+AGG | 0.505211 | 7_2:-62348724 | None:intergenic |
| ATAGGTGGCCCTTCCTTCTG+GGG | 0.506672 | 7_2:+62348994 | Msa1067590:intron |
| CGAGGAGGTGGAGGAGGAGA+CGG | 0.509853 | 7_2:-62346689 | None:intergenic |
| AAATAGCTGGGATCAGGCTA+TGG | 0.511594 | 7_2:+62350525 | Msa1067590:CDS |
| TGCAGGGTTCTGCTAGTAGA+TGG | 0.513146 | 7_2:+62349775 | Msa1067590:intron |
| CTGAGGGGTATTGAGAAAAG+AGG | 0.520464 | 7_2:-62346610 | None:intergenic |
| TTTCTAGGTTTGAGAGAGTG+TGG | 0.523426 | 7_2:+62349177 | Msa1067590:intron |
| CATAAAACATTGGTGGGACT+GGG | 0.527966 | 7_2:-62350668 | None:intergenic |
| GCGATGGTAAGTCCGTTCAT+TGG | 0.527986 | 7_2:-62346664 | None:intergenic |
| GGAGGAGGAGACGGTGGCGA+TGG | 0.529291 | 7_2:-62346680 | None:intergenic |
| TTCTGGCTTGCGTGATGACG+GGG | 0.530180 | 7_2:+62350568 | Msa1067590:CDS |
| TGAATCTCATCAAACATCCA+TGG | 0.532905 | 7_2:-62350186 | None:intergenic |
| TTGTTCCAAATGCTGGACCT+TGG | 0.539407 | 7_2:+62348417 | Msa1067590:CDS |
| TGAGGGGTATTGAGAAAAGA+GGG | 0.540812 | 7_2:-62346609 | None:intergenic |
| AGGGCTTGCGTCAGCCCTTG+TGG | 0.543083 | 7_2:-62348704 | None:intergenic |
| CTGACGCAAGCCCTTCTGAC+CGG | 0.547262 | 7_2:+62348713 | Msa1067590:CDS |
| TACTGTCCGAGAAGAAGGAT+TGG | 0.549609 | 7_2:+62350241 | Msa1067590:CDS |
| TCGTCTCATCTTAATGGACC+AGG | 0.557516 | 7_2:+62348162 | Msa1067590:CDS |
| GCGTGAGCTTCGGTGAGAAA+GGG | 0.558381 | 7_2:-62346638 | None:intergenic |
| GTCCCTCTCGATTACTCTCA+AGG | 0.558596 | 7_2:+62346778 | Msa1067590:CDS |
| GAATCTCATCAAACATCCAT+GGG | 0.559504 | 7_2:-62350185 | None:intergenic |
| GGTGATCCCGGAACTAAAGT+AGG | 0.561474 | 7_2:-62349203 | None:intergenic |
| TAGCTGAACAAGAAGGAGGA+GGG | 0.562297 | 7_2:+62348876 | Msa1067590:CDS |
| CATTATTATGTGAGGTGAGT+GGG | 0.563392 | 7_2:-62346497 | None:intergenic |
| TTCTAGGTTTGAGAGAGTGT+GGG | 0.563972 | 7_2:+62349178 | Msa1067590:intron |
| CATCCACTAGATTCAGTTGG+TGG | 0.568088 | 7_2:-62348115 | None:intergenic |
| AATTATTTAGCTGAACAAGA+AGG | 0.568672 | 7_2:+62348869 | Msa1067590:CDS |
| GGTGGTCGGCACTCAAACCC+AGG | 0.573202 | 7_2:-62348097 | None:intergenic |
| AAGAGTCTGCAGCCCTCTTG+GGG | 0.573534 | 7_2:-62349026 | None:intergenic |
| AAGGTCCAGCATTTGGAACA+AGG | 0.574892 | 7_2:-62348415 | None:intergenic |
| TTAGCTGAACAAGAAGGAGG+AGG | 0.575861 | 7_2:+62348875 | Msa1067590:CDS |
| GGTGAGAAAGGGAGAGTCTG+AGG | 0.576570 | 7_2:-62346627 | None:intergenic |
| ACGCAAGCCCTTCTGACCGG+TGG | 0.577852 | 7_2:+62348716 | Msa1067590:CDS |
| CACTAGATTCAGTTGGTGGT+CGG | 0.578030 | 7_2:-62348111 | None:intergenic |
| AAACAGCTTCTCAAATAGCT+GGG | 0.579714 | 7_2:+62350513 | Msa1067590:CDS |
| TAGGTGGCCCTTCCTTCTGG+GGG | 0.580614 | 7_2:+62348995 | Msa1067590:intron |
| AATTTAAAATCTTCATCCAA+CGG | 0.581330 | 7_2:-62346442 | None:intergenic |
| GTGCATCCATGTCCTATTGG+AGG | 0.585173 | 7_2:-62348743 | None:intergenic |
| ATCCATCCACTAGATTCAGT+TGG | 0.587259 | 7_2:-62348118 | None:intergenic |
| CACCAACTGAATCTAGTGGA+TGG | 0.590816 | 7_2:+62348116 | Msa1067590:CDS |
| TCCTATTGGAGGAATTCCAC+CGG | 0.590937 | 7_2:-62348732 | None:intergenic |
| GTACTACAAAAGATACCCTC+AGG | 0.591325 | 7_2:+62348820 | Msa1067590:CDS |
| GTGAGAAAGGGAGAGTCTGA+GGG | 0.595887 | 7_2:-62346626 | None:intergenic |
| CTAGGACATAAAACATTGGT+GGG | 0.597187 | 7_2:-62350674 | None:intergenic |
| ACATTATTATGTGAGGTGAG+TGG | 0.603531 | 7_2:-62346498 | None:intergenic |
| ACGAAGACGGAGTGAAGGTA+CGG | 0.607003 | 7_2:-62346740 | None:intergenic |
| AGCTGAACAAGAAGGAGGAG+GGG | 0.607085 | 7_2:+62348877 | Msa1067590:CDS |
| GGAATTCCTCCAATAGGACA+TGG | 0.607220 | 7_2:+62348737 | Msa1067590:CDS |
| GGTGACATGCTCCGGCGAGG+AGG | 0.609169 | 7_2:-62346704 | None:intergenic |
| ACCAAAGGCTAGGCAACGCT+AGG | 0.611720 | 7_2:-62350692 | None:intergenic |
| ACCTGCCCCAAAATTGTCCA+AGG | 0.613042 | 7_2:-62348434 | None:intergenic |
| AGCTCACGCATTCCAATGAA+CGG | 0.613457 | 7_2:+62346652 | Msa1067590:CDS |
| GGAGGTGGAGGAGGAGACGG+TGG | 0.618074 | 7_2:-62346686 | None:intergenic |
| ACAGTCTTCGACTAAGATCA+CGG | 0.618266 | 7_2:+62346804 | Msa1067590:CDS |
| TGATCTTAGTCGAAGACTGT+AGG | 0.619626 | 7_2:-62346801 | None:intergenic |
| GCTAGGACATAAAACATTGG+TGG | 0.619882 | 7_2:-62350675 | None:intergenic |
| AGGAATTCCACCGGTCAGAA+GGG | 0.624664 | 7_2:-62348723 | None:intergenic |
| TTGCTGAAATAATGTCAGGT+TGG | 0.626141 | 7_2:+62350793 | Msa1067590:three_prime_UTR |
| TCTGGCTTGCGTGATGACGG+GGG | 0.627112 | 7_2:+62350569 | Msa1067590:CDS |
| CTGGGAGAGAAGAGTAACAA+TGG | 0.631254 | 7_2:-62350650 | None:intergenic |
| TCCGGTGACATGCTCCGGCG+AGG | 0.640777 | 7_2:-62346707 | None:intergenic |
| TGAATCTGTGATCACGAAGA+CGG | 0.643417 | 7_2:-62346753 | None:intergenic |
| AAATTATGGCAGAGTTACGG+TGG | 0.644222 | 7_2:+62348650 | Msa1067590:intron |
| TATTTAGCTGAACAAGAAGG+AGG | 0.644860 | 7_2:+62348872 | Msa1067590:CDS |
| GGCCTTGAGAGTAATCGAGA+GGG | 0.652247 | 7_2:-62346780 | None:intergenic |
| TGATCACGAAGACGGAGTGA+AGG | 0.654079 | 7_2:-62346745 | None:intergenic |
| GTCACAATTCAAGTCTGGAG+AGG | 0.655467 | 7_2:+62348322 | Msa1067590:CDS |
| GACATTGATGACACAGACAA+AGG | 0.656327 | 7_2:-62348302 | None:intergenic |
| CGACCACCAACTGAATCTAG+TGG | 0.661326 | 7_2:+62348112 | Msa1067590:CDS |
| GGGGCATCTTAACCCCAAGA+GGG | 0.663762 | 7_2:+62349014 | Msa1067590:CDS |
| AACGCTAGGACATAAAACAT+TGG | 0.665080 | 7_2:-62350678 | None:intergenic |
| AGGCCTTGAGAGTAATCGAG+AGG | 0.695258 | 7_2:-62346781 | None:intergenic |
| TGAGAAAGGGAGAGTCTGAG+GGG | 0.710739 | 7_2:-62346625 | None:intergenic |
| TCATGTAGAAGAGCATACAG+TGG | 0.712488 | 7_2:-62349370 | None:intergenic |
| TCAGGCATTGAATAACAACA+AGG | 0.725364 | 7_2:+62350281 | Msa1067590:CDS |
| GTGGTGAGAAGAAAAGATAG+TGG | 0.725726 | 7_2:-62346538 | None:intergenic |
| GTGAGAAGAAAAGATAGTGG+TGG | 0.729472 | 7_2:-62346535 | None:intergenic |
| GATAGCAACATTATTATGTG+AGG | 0.734191 | 7_2:-62346505 | None:intergenic |
| AAAGCGCGAAAAGAGCGACG+AGG | 0.776154 | 7_2:-62346577 | None:intergenic |
| AGGATGAAATTGGAGCAATG+TGG | 0.804271 | 7_2:-62346557 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTATTAATTATTTATTAA+TGG | + | chr7_2:62350876-62350895 | Msa1067590:three_prime_UTR | 0.0% |
| !! | AAAAGAAAAATTACTAAATT+TGG | + | chr7_2:62347450-62347469 | Msa1067590:intron | 10.0% |
| !! | AAAGAAAAATTACTAAATTT+GGG | + | chr7_2:62347451-62347470 | Msa1067590:intron | 10.0% |
| !!! | CTTGTTTTATTTTTAAATTA+TGG | + | chr7_2:62348636-62348655 | Msa1067590:intron | 10.0% |
| !!! | AAATTATTTTCTATCATTTT+AGG | + | chr7_2:62350826-62350845 | Msa1067590:three_prime_UTR | 10.0% |
| !! | CTACAATATATAATCTAAAA+AGG | - | chr7_2:62347020-62347039 | None:intergenic | 15.0% |
| !!! | ACAAAATTTATATTTCTATG+AGG | + | chr7_2:62347654-62347673 | Msa1067590:intron | 15.0% |
| !! | ATAATTGAATATGTTTATCA+AGG | + | chr7_2:62350371-62350390 | Msa1067590:intron | 15.0% |
| !! | ATTTCAGCAAATATAATAAT+AGG | - | chr7_2:62350783-62350802 | None:intergenic | 15.0% |
| !!! | AATTTAAAATCTTCATCCAA+CGG | - | chr7_2:62346445-62346464 | None:intergenic | 20.0% |
| !! | ATTCAAGGAAAATAATTGAA+TGG | - | chr7_2:62346883-62346902 | None:intergenic | 20.0% |
| !! | TGAATTTCAAATTTATACCA+AGG | + | chr7_2:62347229-62347248 | Msa1067590:intron | 20.0% |
| !!! | TTCTTTTCTTTATGAAACTA+TGG | + | chr7_2:62347300-62347319 | Msa1067590:intron | 20.0% |
| !!! | TCTTTTCTTTATGAAACTAT+GGG | + | chr7_2:62347301-62347320 | Msa1067590:intron | 20.0% |
| !! | TAATCTTACAGCTATATAAT+TGG | + | chr7_2:62347511-62347530 | Msa1067590:intron | 20.0% |
| !! | AATCTTACAGCTATATAATT+GGG | + | chr7_2:62347512-62347531 | Msa1067590:intron | 20.0% |
| !!! | TTTTTTTTTCTTACCTTTCT+AGG | + | chr7_2:62349162-62349181 | Msa1067590:intron | 20.0% |
| !! | AAAAAATTCTTACAGCATTT+AGG | - | chr7_2:62349250-62349269 | None:intergenic | 20.0% |
| !! | AATATGTTAACAGAATAACT+TGG | - | chr7_2:62350410-62350429 | None:intergenic | 20.0% |
| !! | ATACATGTCTTCATAATAAA+CGG | - | chr7_2:62350471-62350490 | None:intergenic | 20.0% |
| ! | TTCATGCAAATATGAATTCA+AGG | - | chr7_2:62346898-62346917 | None:intergenic | 25.0% |
| ! | GTATCGAATATTTAGTTATC+TGG | + | chr7_2:62346949-62346968 | Msa1067590:intron | 25.0% |
| ! | TGGAATGTAATCCAAATTAT+TGG | + | chr7_2:62346969-62346988 | Msa1067590:intron | 25.0% |
| ! | TCATTCAGAATCCAATAATT+TGG | - | chr7_2:62346983-62347002 | None:intergenic | 25.0% |
| ! | TGGATTCTCTTTACAATAAA+AGG | - | chr7_2:62347054-62347073 | None:intergenic | 25.0% |
| ! | ATAGTTAACATTTCCTAACA+GGG | - | chr7_2:62347360-62347379 | None:intergenic | 25.0% |
| ! | TGTTAGGAAATGTTAACTAT+GGG | + | chr7_2:62347360-62347379 | Msa1067590:intron | 25.0% |
| !! | TTATATTTCTATGAGGAATG+TGG | + | chr7_2:62347661-62347680 | Msa1067590:intron | 25.0% |
| ! | ACTAGAAATGGTTAATATGA+TGG | + | chr7_2:62347769-62347788 | Msa1067590:intron | 25.0% |
| ! | AAAAGAAATCTCTATGATTC+TGG | - | chr7_2:62347828-62347847 | None:intergenic | 25.0% |
| ! | CCTTGCAAAAATAGTAAATA+TGG | - | chr7_2:62348073-62348092 | None:intergenic | 25.0% |
| !!! | CCATATTTACTATTTTTGCA+AGG | + | chr7_2:62348070-62348089 | Msa1067590:CDS | 25.0% |
| !!! | TATTTACTATTTTTGCAAGG+TGG | + | chr7_2:62348073-62348092 | Msa1067590:CDS | 25.0% |
| ! | TTTGTTTGTGTGATAACTTT+AGG | + | chr7_2:62348222-62348241 | Msa1067590:intron | 25.0% |
| ! | ATTGAATTTCAAGGTTACAT+TGG | - | chr7_2:62348602-62348621 | None:intergenic | 25.0% |
| ! | TAAGCAATCATTGAATTTCA+AGG | - | chr7_2:62348611-62348630 | None:intergenic | 25.0% |
| ! | TTTAAATTATGGCAGAGTTA+CGG | + | chr7_2:62348647-62348666 | Msa1067590:intron | 25.0% |
| ! | AATTATTTAGCTGAACAAGA+AGG | + | chr7_2:62348869-62348888 | Msa1067590:CDS | 25.0% |
| ! | AGATAGTTGTAAAAAACACA+AGG | - | chr7_2:62349119-62349138 | None:intergenic | 25.0% |
| !! | GTATAAGAATTTCAAGTAGT+TGG | - | chr7_2:62349685-62349704 | None:intergenic | 25.0% |
| ! | ACTTGAAATTCTTATACTGT+TGG | + | chr7_2:62349688-62349707 | Msa1067590:intron | 25.0% |
| ! | CTTGAAATTCTTATACTGTT+GGG | + | chr7_2:62349689-62349708 | Msa1067590:intron | 25.0% |
| ! | ATGAAGTTATAAAGTCTGTT+TGG | - | chr7_2:62350010-62350029 | None:intergenic | 25.0% |
| ! | TTCTAAATATAATGTGAGTG+CGG | - | chr7_2:62350316-62350335 | None:intergenic | 25.0% |
| ! | TCATATTATACTATGATCAC+AGG | + | chr7_2:62350430-62350449 | Msa1067590:intron | 25.0% |
| ! | AAAGTTCTTGATCATTTGTT+GGG | + | chr7_2:62350593-62350612 | Msa1067590:CDS | 25.0% |
| ! | AAAGAAGTTCAAAAAACCAA+AGG | - | chr7_2:62350710-62350729 | None:intergenic | 25.0% |
| !! | ATATTTGCTGAAATAATGTC+AGG | + | chr7_2:62350789-62350808 | Msa1067590:three_prime_UTR | 25.0% |
| !!! | TATCATTTTAGGTGTTTTGT+AGG | + | chr7_2:62350837-62350856 | Msa1067590:three_prime_UTR | 25.0% |
| GATAGCAACATTATTATGTG+AGG | - | chr7_2:62346508-62346527 | None:intergenic | 30.0% | |
| ! | GAGAATCCAAATCATTTTAG+TGG | + | chr7_2:62347065-62347084 | Msa1067590:intron | 30.0% |
| GAAACTATGGGACATATAAT+TGG | + | chr7_2:62347313-62347332 | Msa1067590:intron | 30.0% | |
| CATAGTTAACATTTCCTAAC+AGG | - | chr7_2:62347361-62347380 | None:intergenic | 30.0% | |
| CTGTTAGGAAATGTTAACTA+TGG | + | chr7_2:62347359-62347378 | Msa1067590:intron | 30.0% | |
| GTTAGGAAATGTTAACTATG+GGG | + | chr7_2:62347361-62347380 | Msa1067590:intron | 30.0% | |
| TTAACTATGGGGCATATATA+TGG | + | chr7_2:62347372-62347391 | Msa1067590:intron | 30.0% | |
| TAACTATGGGGCATATATAT+GGG | + | chr7_2:62347373-62347392 | Msa1067590:intron | 30.0% | |
| CACTCTTTAAGCACTTTAAA+CGG | + | chr7_2:62347419-62347438 | Msa1067590:intron | 30.0% | |
| ATGGTATTACTGGTGAAATT+TGG | + | chr7_2:62347606-62347625 | Msa1067590:intron | 30.0% | |
| TGTTGGAATATCCTATGTTT+CGG | + | chr7_2:62347714-62347733 | Msa1067590:intron | 30.0% | |
| ! | ATCACACGAAATTTTCTATG+TGG | - | chr7_2:62347915-62347934 | None:intergenic | 30.0% |
| !!! | TAATTTTTTAGACTGCCTGA+TGG | + | chr7_2:62347941-62347960 | Msa1067590:intron | 30.0% |
| ! | TGCACTTAATTGTTTTCTCA+TGG | + | chr7_2:62348458-62348477 | Msa1067590:intron | 30.0% |
| TAAAGCAATGCTAAAGACTA+TGG | - | chr7_2:62348511-62348530 | None:intergenic | 30.0% | |
| ATAGTCTTTAGCATTGCTTT+AGG | + | chr7_2:62348510-62348529 | Msa1067590:intron | 30.0% | |
| TAGTCTTTAGCATTGCTTTA+GGG | + | chr7_2:62348511-62348530 | Msa1067590:intron | 30.0% | |
| !! | GAACAATTTTGATATCCTGA+GGG | - | chr7_2:62348838-62348857 | None:intergenic | 30.0% |
| !! | TGAACAATTTTGATATCCTG+AGG | - | chr7_2:62348839-62348858 | None:intergenic | 30.0% |
| AATAAGGAATTGAGCAAACT+TGG | - | chr7_2:62348954-62348973 | None:intergenic | 30.0% | |
| AAGTAGTGACTTATTCTCTT+AGG | - | chr7_2:62349227-62349246 | None:intergenic | 30.0% | |
| AAACTGCATAGAACAAAAAC+TGG | - | chr7_2:62349323-62349342 | None:intergenic | 30.0% | |
| ! | AAGTTTTACCTGACAATAGA+TGG | - | chr7_2:62349398-62349417 | None:intergenic | 30.0% |
| ! | TGTCAGGTAAAACTTCTTTT+CGG | + | chr7_2:62349403-62349422 | Msa1067590:intron | 30.0% |
| ACCAACTATTGTGAAAGTTT+AGG | + | chr7_2:62349451-62349470 | Msa1067590:intron | 30.0% | |
| ! | TTGAAGCATTAACAATGCTT+AGG | + | chr7_2:62349553-62349572 | Msa1067590:intron | 30.0% |
| ! | TTATACAGATGATTTTCCCA+TGG | + | chr7_2:62350169-62350188 | Msa1067590:intron | 30.0% |
| TACATCTTTGAATGGTTTCA+AGG | - | chr7_2:62350214-62350233 | None:intergenic | 30.0% | |
| ATATGAGCTACATCTTTGAA+TGG | - | chr7_2:62350222-62350241 | None:intergenic | 30.0% | |
| TGCCTGAATGTCATATAATT+GGG | - | chr7_2:62350268-62350287 | None:intergenic | 30.0% | |
| ATGCCTGAATGTCATATAAT+TGG | - | chr7_2:62350269-62350288 | None:intergenic | 30.0% | |
| TAACAGAATAACTTGGAGAT+TGG | - | chr7_2:62350403-62350422 | None:intergenic | 30.0% | |
| CAAAGTTCTTGATCATTTGT+TGG | + | chr7_2:62350592-62350611 | Msa1067590:CDS | 30.0% | |
| ! | CATTTGTTGGGAATGTTAAA+CGG | + | chr7_2:62350605-62350624 | Msa1067590:CDS | 30.0% |
| AACAATGGTGATCAAAATAG+AGG | - | chr7_2:62350638-62350657 | None:intergenic | 30.0% | |
| CATTATTATGTGAGGTGAGT+GGG | - | chr7_2:62346500-62346519 | None:intergenic | 35.0% | |
| ACATTATTATGTGAGGTGAG+TGG | - | chr7_2:62346501-62346520 | None:intergenic | 35.0% | |
| CAACGTCCACTAAAATGATT+TGG | - | chr7_2:62347074-62347093 | None:intergenic | 35.0% | |
| !! | CAAATCATTTTAGTGGACGT+TGG | + | chr7_2:62347072-62347091 | Msa1067590:intron | 35.0% |
| ! | TTAGTGGACGTTGGAAATTA+CGG | + | chr7_2:62347081-62347100 | Msa1067590:intron | 35.0% |
| ! | CCAAGCAGTTAAAATTTTGG+CGG | - | chr7_2:62347189-62347208 | None:intergenic | 35.0% |
| !!! | CGCCAAAATTTTAACTGCTT+GGG | + | chr7_2:62347187-62347206 | Msa1067590:intron | 35.0% |
| !!! | GCCAAAATTTTAACTGCTTG+GGG | + | chr7_2:62347188-62347207 | Msa1067590:intron | 35.0% |
| TTCACACTTTATGACACCTT+GGG | - | chr7_2:62347255-62347274 | None:intergenic | 35.0% | |
| ATTCACACTTTATGACACCT+TGG | - | chr7_2:62347256-62347275 | None:intergenic | 35.0% | |
| !! | AAAGTGCTTAAAGAGTGTCT+GGG | - | chr7_2:62347416-62347435 | None:intergenic | 35.0% |
| !! | TAAAGTGCTTAAAGAGTGTC+TGG | - | chr7_2:62347417-62347436 | None:intergenic | 35.0% |
| ! | TATAATTGGGATGATTTGCC+TGG | + | chr7_2:62347525-62347544 | Msa1067590:intron | 35.0% |
| ! | ATAATTGGGATGATTTGCCT+GGG | + | chr7_2:62347526-62347545 | Msa1067590:intron | 35.0% |
| ! | GTCATTGACATGAGTTTGTT+TGG | + | chr7_2:62347564-62347583 | Msa1067590:intron | 35.0% |
| ! | TGACATGAGTTTGTTTGGAT+AGG | + | chr7_2:62347569-62347588 | Msa1067590:intron | 35.0% |
| TCCCAGTTTCATATGACATA+CGG | + | chr7_2:62347630-62347649 | Msa1067590:intron | 35.0% | |
| ACCGTATGTCATATGAAACT+GGG | - | chr7_2:62347634-62347653 | None:intergenic | 35.0% | |
| TACCGTATGTCATATGAAAC+TGG | - | chr7_2:62347635-62347654 | None:intergenic | 35.0% | |
| GCTGATCATGCATTTAATGT+TGG | + | chr7_2:62347697-62347716 | Msa1067590:intron | 35.0% | |
| GCTCTAGTGTTAACTAGAAA+TGG | + | chr7_2:62347757-62347776 | Msa1067590:intron | 35.0% | |
| AAAAATGCCAACGTGACAAA+GGG | - | chr7_2:62347999-62348018 | None:intergenic | 35.0% | |
| !!! | GTCTTTTGTTTTGTTGCAGT+TGG | + | chr7_2:62348028-62348047 | Msa1067590:intron | 35.0% |
| ACAGTTTCGTCTCATCTTAA+TGG | + | chr7_2:62348156-62348175 | Msa1067590:CDS | 35.0% | |
| ! | GCAGAGAAGTACATAAGTAA+TGG | - | chr7_2:62348259-62348278 | None:intergenic | 35.0% |
| TCAATGTCACAATTCAAGTC+TGG | + | chr7_2:62348317-62348336 | Msa1067590:CDS | 35.0% | |
| AGTCTTTAGCATTGCTTTAG+GGG | + | chr7_2:62348512-62348531 | Msa1067590:intron | 35.0% | |
| !! | TATTTGAGTTTTGCACCACA+AGG | + | chr7_2:62348689-62348708 | Msa1067590:CDS | 35.0% |
| !! | ATTTGAGTTTTGCACCACAA+GGG | + | chr7_2:62348690-62348709 | Msa1067590:CDS | 35.0% |
| TATTTAGCTGAACAAGAAGG+AGG | + | chr7_2:62348872-62348891 | Msa1067590:CDS | 35.0% | |
| TGCAAAGAGAAAGGGAAATA+AGG | - | chr7_2:62348970-62348989 | None:intergenic | 35.0% | |
| CTATGCTATGCAAAGAGAAA+GGG | - | chr7_2:62348978-62348997 | None:intergenic | 35.0% | |
| ATAGAACAAAAACTGGAGGT+CGG | - | chr7_2:62349316-62349335 | None:intergenic | 35.0% | |
| ACATGAATCCATCTATTGTC+AGG | + | chr7_2:62349387-62349406 | Msa1067590:CDS | 35.0% | |
| GCCTAAACTTTCACAATAGT+TGG | - | chr7_2:62349455-62349474 | None:intergenic | 35.0% | |
| TTGTGAAAGTTTAGGCTGAT+AGG | + | chr7_2:62349459-62349478 | Msa1067590:intron | 35.0% | |
| !! | GTTAAATTTTAGCGCAAGAC+AGG | - | chr7_2:62349583-62349602 | None:intergenic | 35.0% |
| GTTGGGTAACAACATATGAA+TGG | + | chr7_2:62349706-62349725 | Msa1067590:intron | 35.0% | |
| AACTTCAGTCCTTATTCTAC+TGG | - | chr7_2:62349805-62349824 | None:intergenic | 35.0% | |
| GCAATTAAAGCTGCTAAAGA+AGG | + | chr7_2:62349840-62349859 | Msa1067590:CDS | 35.0% | |
| !! | GGACTACCTATACTTTTTAC+AGG | + | chr7_2:62349861-62349880 | Msa1067590:CDS | 35.0% |
| !! | ACCTATACTTTTTACAGGAG+AGG | + | chr7_2:62349866-62349885 | Msa1067590:CDS | 35.0% |
| ! | ACCTCTCCTGTAAAAAGTAT+AGG | - | chr7_2:62349870-62349889 | None:intergenic | 35.0% |
| GAATCTCATCAAACATCCAT+GGG | - | chr7_2:62350188-62350207 | None:intergenic | 35.0% | |
| TGAATCTCATCAAACATCCA+TGG | - | chr7_2:62350189-62350208 | None:intergenic | 35.0% | |
| GTCCCAATTATATGACATTC+AGG | + | chr7_2:62350263-62350282 | Msa1067590:CDS | 35.0% | |
| !! | TCAGGCATTGAATAACAACA+AGG | + | chr7_2:62350281-62350300 | Msa1067590:CDS | 35.0% |
| AAATATAATGTGAGTGCGGA+GGG | - | chr7_2:62350312-62350331 | None:intergenic | 35.0% | |
| TAAATATAATGTGAGTGCGG+AGG | - | chr7_2:62350313-62350332 | None:intergenic | 35.0% | |
| ! | TGTGAATTTTAAGCTGTCGA+AGG | + | chr7_2:62350490-62350509 | Msa1067590:CDS | 35.0% |
| AAACAGCTTCTCAAATAGCT+GGG | + | chr7_2:62350513-62350532 | Msa1067590:CDS | 35.0% | |
| ACTAATGAGTTCATGCATTC+TGG | + | chr7_2:62350551-62350570 | Msa1067590:CDS | 35.0% | |
| CTAGGACATAAAACATTGGT+GGG | - | chr7_2:62350677-62350696 | None:intergenic | 35.0% | |
| AACGCTAGGACATAAAACAT+TGG | - | chr7_2:62350681-62350700 | None:intergenic | 35.0% | |
| AGTTCAAAAAACCAAAGGCT+AGG | - | chr7_2:62350705-62350724 | None:intergenic | 35.0% | |
| TTGCTGAAATAATGTCAGGT+TGG | + | chr7_2:62350793-62350812 | Msa1067590:three_prime_UTR | 35.0% | |
| ! | GTGAGAAGAAAAGATAGTGG+TGG | - | chr7_2:62346538-62346557 | None:intergenic | 40.0% |
| GTGGTGAGAAGAAAAGATAG+TGG | - | chr7_2:62346541-62346560 | None:intergenic | 40.0% | |
| AGGATGAAATTGGAGCAATG+TGG | - | chr7_2:62346560-62346579 | None:intergenic | 40.0% | |
| !! | TGAGGGGTATTGAGAAAAGA+GGG | - | chr7_2:62346612-62346631 | None:intergenic | 40.0% |
| TGAATCTGTGATCACGAAGA+CGG | - | chr7_2:62346756-62346775 | None:intergenic | 40.0% | |
| TGATCTTAGTCGAAGACTGT+AGG | - | chr7_2:62346804-62346823 | None:intergenic | 40.0% | |
| ACAGTCTTCGACTAAGATCA+CGG | + | chr7_2:62346804-62346823 | Msa1067590:CDS | 40.0% | |
| GTGAGTTTGACAGAATCACA+TGG | + | chr7_2:62347103-62347122 | Msa1067590:intron | 40.0% | |
| !! | AAAGCTGCACTTTAGAGCTT+CGG | - | chr7_2:62347145-62347164 | None:intergenic | 40.0% |
| !!! | CCGCCAAAATTTTAACTGCT+TGG | + | chr7_2:62347186-62347205 | Msa1067590:intron | 40.0% |
| ! | GCCCCAAGCAGTTAAAATTT+TGG | - | chr7_2:62347192-62347211 | None:intergenic | 40.0% |
| !! | TTGGGGCTTTTTGTTACTTG+AGG | + | chr7_2:62347205-62347224 | Msa1067590:intron | 40.0% |
| CAAATTTATACCAAGGCCCA+AGG | + | chr7_2:62347236-62347255 | Msa1067590:intron | 40.0% | |
| AGATTATTCGAGTCCCTGTT+AGG | + | chr7_2:62347344-62347363 | Msa1067590:intron | 40.0% | |
| !! | AAGTGCTTAAAGAGTGTCTG+GGG | - | chr7_2:62347415-62347434 | None:intergenic | 40.0% |
| TATATATATACGAGTGCCCC+CGG | - | chr7_2:62347493-62347512 | None:intergenic | 40.0% | |
| GTTTGTTTGGATAGGCAACA+TGG | + | chr7_2:62347577-62347596 | Msa1067590:intron | 40.0% | |
| !! | ATGGCTTTGGATGGTATTAC+TGG | + | chr7_2:62347596-62347615 | Msa1067590:intron | 40.0% |
| ! | AATATCCTATGTTTCGGTGC+TGG | + | chr7_2:62347720-62347739 | Msa1067590:intron | 40.0% |
| TCTCTATGATTCTGGACTTG+AGG | - | chr7_2:62347820-62347839 | None:intergenic | 40.0% | |
| CTATGTGGCTGATCAAAAAC+TGG | - | chr7_2:62347900-62347919 | None:intergenic | 40.0% | |
| AAAATGCCAACGTGACAAAG+GGG | - | chr7_2:62347998-62348017 | None:intergenic | 40.0% | |
| CAAAAATGCCAACGTGACAA+AGG | - | chr7_2:62348000-62348019 | None:intergenic | 40.0% | |
| !! | TATTTTTGCAAGGTGGTCCT+GGG | + | chr7_2:62348080-62348099 | Msa1067590:CDS | 40.0% |
| ATCCATCCACTAGATTCAGT+TGG | - | chr7_2:62348121-62348140 | None:intergenic | 40.0% | |
| !! | ATGGACCAGGCATGTTTTTA+TGG | + | chr7_2:62348175-62348194 | Msa1067590:intron | 40.0% |
| AGTGTCCATAAAAACATGCC+TGG | - | chr7_2:62348183-62348202 | None:intergenic | 40.0% | |
| ! | GACATTGATGACACAGACAA+AGG | - | chr7_2:62348305-62348324 | None:intergenic | 40.0% |
| !! | TTTCTTGATTTGTGAGCACG+TGG | + | chr7_2:62348543-62348562 | Msa1067590:intron | 40.0% |
| AAATTATGGCAGAGTTACGG+TGG | + | chr7_2:62348650-62348669 | Msa1067590:intron | 40.0% | |
| GTACTACAAAAGATACCCTC+AGG | + | chr7_2:62348820-62348839 | Msa1067590:CDS | 40.0% | |
| CCTATGCTATGCAAAGAGAA+AGG | - | chr7_2:62348979-62348998 | None:intergenic | 40.0% | |
| CCTTTCTCTTTGCATAGCAT+AGG | + | chr7_2:62348976-62348995 | Msa1067590:intron | 40.0% | |
| TTCTCTTTGCATAGCATAGG+TGG | + | chr7_2:62348979-62348998 | Msa1067590:intron | 40.0% | |
| ACACTCTCTCAAACCTAGAA+AGG | - | chr7_2:62349178-62349197 | None:intergenic | 40.0% | |
| TTTCTAGGTTTGAGAGAGTG+TGG | + | chr7_2:62349177-62349196 | Msa1067590:intron | 40.0% | |
| ! | TTCTAGGTTTGAGAGAGTGT+GGG | + | chr7_2:62349178-62349197 | Msa1067590:intron | 40.0% |
| CTTATTCTCTTAGGTGATCC+CGG | - | chr7_2:62349218-62349237 | None:intergenic | 40.0% | |
| CTGCATAGAACAAAAACTGG+AGG | - | chr7_2:62349320-62349339 | None:intergenic | 40.0% | |
| ! | TCATGTAGAAGAGCATACAG+TGG | - | chr7_2:62349373-62349392 | None:intergenic | 40.0% |
| TCATGACAAATGCATACACG+AGG | - | chr7_2:62349431-62349450 | None:intergenic | 40.0% | |
| ATGTCCCTGATGTAACTAAG+AGG | + | chr7_2:62349523-62349542 | Msa1067590:intron | 40.0% | |
| TGTCCCTGATGTAACTAAGA+GGG | + | chr7_2:62349524-62349543 | Msa1067590:intron | 40.0% | |
| AAGCCCTCTTAGTTACATCA+GGG | - | chr7_2:62349530-62349549 | None:intergenic | 40.0% | |
| GAGCATCAAAGATTGAACTC+TGG | + | chr7_2:62349621-62349640 | Msa1067590:intron | 40.0% | |
| AGATTGAACTCTGGATCACT+TGG | + | chr7_2:62349630-62349649 | Msa1067590:intron | 40.0% | |
| ! | CAAGTAGTTGGTTCATGACA+TGG | - | chr7_2:62349673-62349692 | None:intergenic | 40.0% |
| TGCAATTGCAGAGACATGAA+AGG | - | chr7_2:62350058-62350077 | None:intergenic | 40.0% | |
| TCATATACTGTCCGAGAAGA+AGG | + | chr7_2:62350236-62350255 | Msa1067590:CDS | 40.0% | |
| GAAACAGCTTCTCAAATAGC+TGG | + | chr7_2:62350512-62350531 | Msa1067590:CDS | 40.0% | |
| CATAAAACATTGGTGGGACT+GGG | - | chr7_2:62350671-62350690 | None:intergenic | 40.0% | |
| ACATAAAACATTGGTGGGAC+TGG | - | chr7_2:62350672-62350691 | None:intergenic | 40.0% | |
| GCTAGGACATAAAACATTGG+TGG | - | chr7_2:62350678-62350697 | None:intergenic | 40.0% | |
| AAGAGCGACGAGGATGAAAT+TGG | - | chr7_2:62346570-62346589 | None:intergenic | 45.0% | |
| !! | CTGAGGGGTATTGAGAAAAG+AGG | - | chr7_2:62346613-62346632 | None:intergenic | 45.0% |
| TCATTGGAATGCGTGAGCTT+CGG | - | chr7_2:62346651-62346670 | None:intergenic | 45.0% | |
| AGCTCACGCATTCCAATGAA+CGG | + | chr7_2:62346652-62346671 | Msa1067590:CDS | 45.0% | |
| ! | TGCAGCTTTTGTCAAAACCC+TGG | + | chr7_2:62347156-62347175 | Msa1067590:intron | 45.0% |
| ! | CTTTTGTCAAAACCCTGGTG+CGG | + | chr7_2:62347161-62347180 | Msa1067590:intron | 45.0% |
| !! | AGTGCTTAAAGAGTGTCTGG+GGG | - | chr7_2:62347414-62347433 | None:intergenic | 45.0% |
| ATATATATACGAGTGCCCCC+GGG | - | chr7_2:62347492-62347511 | None:intergenic | 45.0% | |
| TTGGATAGGCAACATGGCTT+TGG | + | chr7_2:62347583-62347602 | Msa1067590:intron | 45.0% | |
| !! | ATAGGCAACATGGCTTTGGA+TGG | + | chr7_2:62347587-62347606 | Msa1067590:intron | 45.0% |
| AAATGCCAACGTGACAAAGG+GGG | - | chr7_2:62347997-62348016 | None:intergenic | 45.0% | |
| !!! | CTATTTTTGCAAGGTGGTCC+TGG | + | chr7_2:62348079-62348098 | Msa1067590:CDS | 45.0% |
| !! | CACTAGATTCAGTTGGTGGT+CGG | - | chr7_2:62348114-62348133 | None:intergenic | 45.0% |
| CATCCACTAGATTCAGTTGG+TGG | - | chr7_2:62348118-62348137 | None:intergenic | 45.0% | |
| CACCAACTGAATCTAGTGGA+TGG | + | chr7_2:62348116-62348135 | Msa1067590:CDS | 45.0% | |
| ! | TCGTCTCATCTTAATGGACC+AGG | + | chr7_2:62348162-62348181 | Msa1067590:CDS | 45.0% |
| TTATGTACTTCTCTGCAGCG+AGG | + | chr7_2:62348263-62348282 | Msa1067590:intron | 45.0% | |
| GTCACAATTCAAGTCTGGAG+AGG | + | chr7_2:62348322-62348341 | Msa1067590:CDS | 45.0% | |
| ! | AAGGTCCAGCATTTGGAACA+AGG | - | chr7_2:62348418-62348437 | None:intergenic | 45.0% |
| TTGTTCCAAATGCTGGACCT+TGG | + | chr7_2:62348417-62348436 | Msa1067590:CDS | 45.0% | |
| ATTGTCCAAGGTCCAGCATT+TGG | - | chr7_2:62348425-62348444 | None:intergenic | 45.0% | |
| ! | TGCTGGACCTTGGACAATTT+TGG | + | chr7_2:62348427-62348446 | Msa1067590:CDS | 45.0% |
| ! | GCTGGACCTTGGACAATTTT+GGG | + | chr7_2:62348428-62348447 | Msa1067590:CDS | 45.0% |
| ! | CTGGACCTTGGACAATTTTG+GGG | + | chr7_2:62348429-62348448 | Msa1067590:CDS | 45.0% |
| !! | CAAGGTTACATTGGCTTCGA+GGG | - | chr7_2:62348593-62348612 | None:intergenic | 45.0% |
| !! | TCAAGGTTACATTGGCTTCG+AGG | - | chr7_2:62348594-62348613 | None:intergenic | 45.0% |
| TCCTATTGGAGGAATTCCAC+CGG | - | chr7_2:62348735-62348754 | None:intergenic | 45.0% | |
| GGAATTCCTCCAATAGGACA+TGG | + | chr7_2:62348737-62348756 | Msa1067590:CDS | 45.0% | |
| TTAGCTGAACAAGAAGGAGG+AGG | + | chr7_2:62348875-62348894 | Msa1067590:CDS | 45.0% | |
| TAGCTGAACAAGAAGGAGGA+GGG | + | chr7_2:62348876-62348895 | Msa1067590:CDS | 45.0% | |
| ! | GTGGGATCCTACTTTAGTTC+CGG | + | chr7_2:62349196-62349215 | Msa1067590:CDS | 45.0% |
| ! | TGGGATCCTACTTTAGTTCC+GGG | + | chr7_2:62349197-62349216 | Msa1067590:CDS | 45.0% |
| !! | ACTGGAGGTCGGTTTTCAAA+AGG | - | chr7_2:62349305-62349324 | None:intergenic | 45.0% |
| CAAGCCCTCTTAGTTACATC+AGG | - | chr7_2:62349531-62349550 | None:intergenic | 45.0% | |
| GATGGTCTGCCAGTAGAATA+AGG | + | chr7_2:62349793-62349812 | Msa1067590:CDS | 45.0% | |
| CATGTCTCTGCAATTGCAGT+CGG | + | chr7_2:62350060-62350079 | Msa1067590:intron | 45.0% | |
| TACTGTCCGAGAAGAAGGAT+TGG | + | chr7_2:62350241-62350260 | Msa1067590:CDS | 45.0% | |
| TTGGGACCAATCCTTCTTCT+CGG | - | chr7_2:62350250-62350269 | None:intergenic | 45.0% | |
| TAATAAACGGCAGCTGCAAC+AGG | - | chr7_2:62350458-62350477 | None:intergenic | 45.0% | |
| CTTCTCAAATAGCTGGGATC+AGG | + | chr7_2:62350519-62350538 | Msa1067590:CDS | 45.0% | |
| AAATAGCTGGGATCAGGCTA+TGG | + | chr7_2:62350525-62350544 | Msa1067590:CDS | 45.0% | |
| CTGGGAGAGAAGAGTAACAA+TGG | - | chr7_2:62350653-62350672 | None:intergenic | 45.0% | |
| TGAGAAAGGGAGAGTCTGAG+GGG | - | chr7_2:62346628-62346647 | None:intergenic | 50.0% | |
| GTGAGAAAGGGAGAGTCTGA+GGG | - | chr7_2:62346629-62346648 | None:intergenic | 50.0% | |
| GCGATGGTAAGTCCGTTCAT+TGG | - | chr7_2:62346667-62346686 | None:intergenic | 50.0% | |
| AGGTACGGAGAACCAATCTC+CGG | - | chr7_2:62346728-62346747 | None:intergenic | 50.0% | |
| ACGAAGACGGAGTGAAGGTA+CGG | - | chr7_2:62346743-62346762 | None:intergenic | 50.0% | |
| TGATCACGAAGACGGAGTGA+AGG | - | chr7_2:62346748-62346767 | None:intergenic | 50.0% | |
| GTCCCTCTCGATTACTCTCA+AGG | + | chr7_2:62346778-62346797 | Msa1067590:CDS | 50.0% | |
| GGCCTTGAGAGTAATCGAGA+GGG | - | chr7_2:62346783-62346802 | None:intergenic | 50.0% | |
| AGGCCTTGAGAGTAATCGAG+AGG | - | chr7_2:62346784-62346803 | None:intergenic | 50.0% | |
| TTCGCTCGTGAAGTTGTTGC+AGG | + | chr7_2:62346829-62346848 | Msa1067590:CDS | 50.0% | |
| ! | GACAGAATCACATGGTGCCA+AGG | + | chr7_2:62347111-62347130 | Msa1067590:intron | 50.0% |
| GAGCTTCGGCAAAATCACCT+TGG | - | chr7_2:62347131-62347150 | None:intergenic | 50.0% | |
| CTTTATGACACCTTGGGCCT+TGG | - | chr7_2:62347249-62347268 | None:intergenic | 50.0% | |
| TATATATACGAGTGCCCCCG+GGG | - | chr7_2:62347491-62347510 | None:intergenic | 50.0% | |
| ATTTGCCTGGGATGAGGACA+TGG | + | chr7_2:62347538-62347557 | Msa1067590:intron | 50.0% | |
| ! | GTTTGCCAGCACCGAAACAT+AGG | - | chr7_2:62347728-62347747 | None:intergenic | 50.0% |
| AGCACAAGTGCTCATCCATC+AGG | - | chr7_2:62347959-62347978 | None:intergenic | 50.0% | |
| AATCACCCCCTTTGTCACGT+TGG | + | chr7_2:62347989-62348008 | Msa1067590:intron | 50.0% | |
| CGACCACCAACTGAATCTAG+TGG | + | chr7_2:62348112-62348131 | Msa1067590:CDS | 50.0% | |
| ! | GTTCGCCTTGTTCCAAATGC+TGG | + | chr7_2:62348410-62348429 | Msa1067590:CDS | 50.0% |
| !!! | ACCTTGGACAATTTTGGGGC+AGG | + | chr7_2:62348433-62348452 | Msa1067590:CDS | 50.0% |
| ACCTGCCCCAAAATTGTCCA+AGG | - | chr7_2:62348437-62348456 | None:intergenic | 50.0% | |
| AGGAATTCCACCGGTCAGAA+GGG | - | chr7_2:62348726-62348745 | None:intergenic | 50.0% | |
| ACCGGTGGAATTCCTCCAAT+AGG | + | chr7_2:62348731-62348750 | Msa1067590:CDS | 50.0% | |
| GTGCATCCATGTCCTATTGG+AGG | - | chr7_2:62348746-62348765 | None:intergenic | 50.0% | |
| GCAGTGCATCCATGTCCTAT+TGG | - | chr7_2:62348749-62348768 | None:intergenic | 50.0% | |
| AGCTGAACAAGAAGGAGGAG+GGG | + | chr7_2:62348877-62348896 | Msa1067590:CDS | 50.0% | |
| TAAGATGCCCCCAGAAGGAA+GGG | - | chr7_2:62349005-62349024 | None:intergenic | 50.0% | |
| TTAAGATGCCCCCAGAAGGA+AGG | - | chr7_2:62349006-62349025 | None:intergenic | 50.0% | |
| ! | ACTCTTGGTCTCTCTGGCTT+AGG | + | chr7_2:62349043-62349062 | Msa1067590:CDS | 50.0% |
| GGTGATCCCGGAACTAAAGT+AGG | - | chr7_2:62349206-62349225 | None:intergenic | 50.0% | |
| TTGTTCTCCCTTGACACTGC+AGG | + | chr7_2:62349758-62349777 | Msa1067590:intron | 50.0% | |
| TGTTCTCCCTTGACACTGCA+GGG | + | chr7_2:62349759-62349778 | Msa1067590:intron | 50.0% | |
| TGCAGGGTTCTGCTAGTAGA+TGG | + | chr7_2:62349775-62349794 | Msa1067590:intron | 50.0% | |
| TTGGCTCAGCTTCGCATATG+TGG | - | chr7_2:62349991-62350010 | None:intergenic | 50.0% | |
| ! | CAATTGCAGTCGGCTTATGC+AGG | + | chr7_2:62350070-62350089 | Msa1067590:intron | 50.0% |
| !! | CATTCTGGCTTGCGTGATGA+CGG | + | chr7_2:62350566-62350585 | Msa1067590:CDS | 50.0% |
| !! | ATTCTGGCTTGCGTGATGAC+GGG | + | chr7_2:62350567-62350586 | Msa1067590:CDS | 50.0% |
| AAAGCGCGAAAAGAGCGACG+AGG | - | chr7_2:62346580-62346599 | None:intergenic | 55.0% | |
| GGTGAGAAAGGGAGAGTCTG+AGG | - | chr7_2:62346630-62346649 | None:intergenic | 55.0% | |
| GCGTGAGCTTCGGTGAGAAA+GGG | - | chr7_2:62346641-62346660 | None:intergenic | 55.0% | |
| TGCGTGAGCTTCGGTGAGAA+AGG | - | chr7_2:62346642-62346661 | None:intergenic | 55.0% | |
| CAATCTCCGGTGACATGCTC+CGG | - | chr7_2:62346715-62346734 | None:intergenic | 55.0% | |
| !! | ATTTTGGCGGAACCGCACCA+GGG | - | chr7_2:62347176-62347195 | None:intergenic | 55.0% |
| !! | AATTTTGGCGGAACCGCACC+AGG | - | chr7_2:62347177-62347196 | None:intergenic | 55.0% |
| !! | GGGATCCTTAAAGAGTGCCC+CGG | + | chr7_2:62347471-62347490 | Msa1067590:intron | 55.0% |
| !! | GGATCCTTAAAGAGTGCCCC+GGG | + | chr7_2:62347472-62347491 | Msa1067590:intron | 55.0% |
| !! | GATCCTTAAAGAGTGCCCCG+GGG | + | chr7_2:62347473-62347492 | Msa1067590:intron | 55.0% |
| !! | ATCCTTAAAGAGTGCCCCGG+GGG | + | chr7_2:62347474-62347493 | Msa1067590:intron | 55.0% |
| ! | GGGATGATTTGCCTGGGATG+AGG | + | chr7_2:62347532-62347551 | Msa1067590:intron | 55.0% |
| ACTTCTCTGCAGCGAGGAAC+AGG | + | chr7_2:62348269-62348288 | Msa1067590:intron | 55.0% | |
| GAGGAATTCCACCGGTCAGA+AGG | - | chr7_2:62348727-62348746 | None:intergenic | 55.0% | |
| CATAGGTGGCCCTTCCTTCT+GGG | + | chr7_2:62348993-62349012 | Msa1067590:intron | 55.0% | |
| ATAGGTGGCCCTTCCTTCTG+GGG | + | chr7_2:62348994-62349013 | Msa1067590:intron | 55.0% | |
| ! | GGGGCATCTTAACCCCAAGA+GGG | + | chr7_2:62349014-62349033 | Msa1067590:CDS | 55.0% |
| AAGAGTCTGCAGCCCTCTTG+GGG | - | chr7_2:62349029-62349048 | None:intergenic | 55.0% | |
| CAAGAGTCTGCAGCCCTCTT+GGG | - | chr7_2:62349030-62349049 | None:intergenic | 55.0% | |
| CTGCAGACTCTTGGTCTCTC+TGG | + | chr7_2:62349037-62349056 | Msa1067590:CDS | 55.0% | |
| ! | GGTCTCTCTGGCTTAGGATC+TGG | + | chr7_2:62349049-62349068 | Msa1067590:CDS | 55.0% |
| ! | TCTGGCTTAGGATCTGGAGC+TGG | + | chr7_2:62349055-62349074 | Msa1067590:CDS | 55.0% |
| TCTGGATCACTTGGTCGCAG+AGG | + | chr7_2:62349639-62349658 | Msa1067590:intron | 55.0% | |
| GCAGAACCCTGCAGTGTCAA+GGG | - | chr7_2:62349768-62349787 | None:intergenic | 55.0% | |
| AGCAGAACCCTGCAGTGTCA+AGG | - | chr7_2:62349769-62349788 | None:intergenic | 55.0% | |
| !! | TTCTGGCTTGCGTGATGACG+GGG | + | chr7_2:62350568-62350587 | Msa1067590:CDS | 55.0% |
| ! | TCCTAGCGTTGCCTAGCCTT+TGG | + | chr7_2:62350691-62350710 | Msa1067590:three_prime_UTR | 55.0% |
| ACCAAAGGCTAGGCAACGCT+AGG | - | chr7_2:62350695-62350714 | None:intergenic | 55.0% | |
| CGGAGCATGTCACCGGAGAT+TGG | + | chr7_2:62346713-62346732 | Msa1067590:CDS | 60.0% | |
| ACCTGCCATGTCCTCATCCC+AGG | - | chr7_2:62347546-62347565 | None:intergenic | 60.0% | |
| CTGACGCAAGCCCTTCTGAC+CGG | + | chr7_2:62348713-62348732 | Msa1067590:CDS | 60.0% | |
| GCATAGGTGGCCCTTCCTTC+TGG | + | chr7_2:62348992-62349011 | Msa1067590:intron | 60.0% | |
| TAGGTGGCCCTTCCTTCTGG+GGG | + | chr7_2:62348995-62349014 | Msa1067590:intron | 60.0% | |
| GGGGTTAAGATGCCCCCAGA+AGG | - | chr7_2:62349010-62349029 | None:intergenic | 60.0% | |
| !! | GGGGGCATCTTAACCCCAAG+AGG | + | chr7_2:62349013-62349032 | Msa1067590:CDS | 60.0% |
| CCAAGAGTCTGCAGCCCTCT+TGG | - | chr7_2:62349031-62349050 | None:intergenic | 60.0% | |
| CCAAGAGGGCTGCAGACTCT+TGG | + | chr7_2:62349028-62349047 | Msa1067590:CDS | 60.0% | |
| !! | TCTGGCTTGCGTGATGACGG+GGG | + | chr7_2:62350569-62350588 | Msa1067590:CDS | 60.0% |
| CGAGGAGGTGGAGGAGGAGA+CGG | - | chr7_2:62346692-62346711 | None:intergenic | 65.0% | |
| TCCTCGCCGGAGCATGTCAC+CGG | + | chr7_2:62346706-62346725 | Msa1067590:CDS | 65.0% | |
| ! | TGCCCCCGGGGCACTCTTTA+AGG | - | chr7_2:62347479-62347498 | None:intergenic | 65.0% |
| GCCTGGGATGAGGACATGGC+AGG | + | chr7_2:62347542-62347561 | Msa1067590:intron | 65.0% | |
| GGTGGTCGGCACTCAAACCC+AGG | - | chr7_2:62348100-62348119 | None:intergenic | 65.0% | |
| AGGGCTTGCGTCAGCCCTTG+TGG | - | chr7_2:62348707-62348726 | None:intergenic | 65.0% | |
| ACGCAAGCCCTTCTGACCGG+TGG | + | chr7_2:62348716-62348735 | Msa1067590:CDS | 65.0% | |
| GGAGGAGGAGACGGTGGCGA+TGG | - | chr7_2:62346683-62346702 | None:intergenic | 70.0% | |
| GGAGGTGGAGGAGGAGACGG+TGG | - | chr7_2:62346689-62346708 | None:intergenic | 70.0% | |
| CTCCTCCTCCACCTCCTCGC+CGG | + | chr7_2:62346693-62346712 | Msa1067590:CDS | 70.0% | |
| ATGCTCCGGCGAGGAGGTGG+AGG | - | chr7_2:62346701-62346720 | None:intergenic | 70.0% | |
| GACATGCTCCGGCGAGGAGG+TGG | - | chr7_2:62346704-62346723 | None:intergenic | 70.0% | |
| GGTGACATGCTCCGGCGAGG+AGG | - | chr7_2:62346707-62346726 | None:intergenic | 70.0% | |
| TCCGGTGACATGCTCCGGCG+AGG | - | chr7_2:62346710-62346729 | None:intergenic | 70.0% | |
| CTCCGGCGAGGAGGTGGAGG+AGG | - | chr7_2:62346698-62346717 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 62346429 | 62350918 | 62346429 | ID=Msa1067590;Name=Msa1067590 |
| chr7_2 | mRNA | 62346429 | 62350918 | 62346429 | ID=Msa1067590-mRNA-1;Parent=Msa1067590;Name=Msa1067590-mRNA-1;_AED=0.09;_eAED=0.09;_QI=88|1|1|1|1|1|10|272|517 |
| chr7_2 | exon | 62346429 | 62346850 | 62346429 | ID=Msa1067590-mRNA-1:exon:12618;Parent=Msa1067590-mRNA-1 |
| chr7_2 | exon | 62348047 | 62348183 | 62348047 | ID=Msa1067590-mRNA-1:exon:12619;Parent=Msa1067590-mRNA-1 |
| chr7_2 | exon | 62348281 | 62348454 | 62348281 | ID=Msa1067590-mRNA-1:exon:12620;Parent=Msa1067590-mRNA-1 |
| chr7_2 | exon | 62348662 | 62348898 | 62348662 | ID=Msa1067590-mRNA-1:exon:12621;Parent=Msa1067590-mRNA-1 |
| chr7_2 | exon | 62348998 | 62349098 | 62348998 | ID=Msa1067590-mRNA-1:exon:12622;Parent=Msa1067590-mRNA-1 |
| chr7_2 | exon | 62349184 | 62349256 | 62349184 | ID=Msa1067590-mRNA-1:exon:12623;Parent=Msa1067590-mRNA-1 |
| chr7_2 | exon | 62349340 | 62349408 | 62349340 | ID=Msa1067590-mRNA-1:exon:12624;Parent=Msa1067590-mRNA-1 |
| chr7_2 | exon | 62349780 | 62349887 | 62349780 | ID=Msa1067590-mRNA-1:exon:12625;Parent=Msa1067590-mRNA-1 |
| chr7_2 | exon | 62350177 | 62350302 | 62350177 | ID=Msa1067590-mRNA-1:exon:12626;Parent=Msa1067590-mRNA-1 |
| chr7_2 | exon | 62350452 | 62350918 | 62350452 | ID=Msa1067590-mRNA-1:exon:12627;Parent=Msa1067590-mRNA-1 |
| chr7_2 | five_prime_UTR | 62346429 | 62346516 | 62346429 | ID=Msa1067590-mRNA-1:five_prime_utr;Parent=Msa1067590-mRNA-1 |
| chr7_2 | CDS | 62346517 | 62346850 | 62346517 | ID=Msa1067590-mRNA-1:cds;Parent=Msa1067590-mRNA-1 |
| chr7_2 | CDS | 62348047 | 62348183 | 62348047 | ID=Msa1067590-mRNA-1:cds;Parent=Msa1067590-mRNA-1 |
| chr7_2 | CDS | 62348281 | 62348454 | 62348281 | ID=Msa1067590-mRNA-1:cds;Parent=Msa1067590-mRNA-1 |
| chr7_2 | CDS | 62348662 | 62348898 | 62348662 | ID=Msa1067590-mRNA-1:cds;Parent=Msa1067590-mRNA-1 |
| chr7_2 | CDS | 62348998 | 62349098 | 62348998 | ID=Msa1067590-mRNA-1:cds;Parent=Msa1067590-mRNA-1 |
| chr7_2 | CDS | 62349184 | 62349256 | 62349184 | ID=Msa1067590-mRNA-1:cds;Parent=Msa1067590-mRNA-1 |
| chr7_2 | CDS | 62349340 | 62349408 | 62349340 | ID=Msa1067590-mRNA-1:cds;Parent=Msa1067590-mRNA-1 |
| chr7_2 | CDS | 62349780 | 62349887 | 62349780 | ID=Msa1067590-mRNA-1:cds;Parent=Msa1067590-mRNA-1 |
| chr7_2 | CDS | 62350177 | 62350302 | 62350177 | ID=Msa1067590-mRNA-1:cds;Parent=Msa1067590-mRNA-1 |
| chr7_2 | CDS | 62350452 | 62350646 | 62350452 | ID=Msa1067590-mRNA-1:cds;Parent=Msa1067590-mRNA-1 |
| chr7_2 | three_prime_UTR | 62350647 | 62350918 | 62350647 | ID=Msa1067590-mRNA-1:three_prime_utr;Parent=Msa1067590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
