Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1028770 | XP_003624126.1 | 91.525 | 649 | 19 | 2 | 1 | 649 | 1 | 613 | 0.0 | 1213 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1028770 | G7KQL6 | 91.525 | 649 | 19 | 2 | 1 | 649 | 1 | 613 | 0.0 | 1213 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1028770 | Msa1067900 | 0.803788 | 2.949373e-49 | -8.615850e-47 |
| Msa1028770 | Msa1395590 | 0.807488 | 4.932097e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1028770 | MtrunA17_Chr7g0249061 | 91.525 | 649 | 19 | 2 | 1 | 649 | 1 | 613 | 0.0 | 1213 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1028770 | AT5G16520.1 | 53.798 | 645 | 234 | 9 | 1 | 635 | 1 | 591 | 0.0 | 695 |
| Msa1028770 | AT5G16520.2 | 64.474 | 456 | 145 | 2 | 1 | 455 | 1 | 440 | 0.0 | 638 |
Find 148 sgRNAs with CRISPR-Local
Find 325 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTTCCATTGCTCTTTATTT+TGG | 0.166778 | 7_1:-61964227 | None:intergenic |
| ACAGCAGTAGCGGGACTATT+TGG | 0.178995 | 7_1:-61961057 | None:intergenic |
| TTTGAACATGAATGATTAAA+TGG | 0.181268 | 7_1:-61958852 | None:intergenic |
| CAACTATGATGAATCTAAAA+AGG | 0.223608 | 7_1:+61962771 | Msa1028770:CDS |
| GGTTGATAAAGAGAGTATTT+TGG | 0.245485 | 7_1:+61961404 | Msa1028770:CDS |
| TTCAGAAATGAGGTTAATTC+TGG | 0.294018 | 7_1:-61960799 | None:intergenic |
| GGTGTAAAGCTCAAGATAAT+TGG | 0.296124 | 7_1:+61962547 | Msa1028770:CDS |
| AACGATGCTTGTAAAATTCA+TGG | 0.301107 | 7_1:-61964290 | None:intergenic |
| ACAGTCACAAGCTGTGTTCT+TGG | 0.320746 | 7_1:+61959145 | Msa1028770:CDS |
| CGTGCAAATTACGGTATATT+CGG | 0.323620 | 7_1:-61961230 | None:intergenic |
| AAGCTGCCAGAGACACTTCC+TGG | 0.334787 | 7_1:+61959098 | Msa1028770:CDS |
| CACTTGTCATGCTTCTCTCT+TGG | 0.348333 | 7_1:+61959174 | Msa1028770:CDS |
| CCGATAACATGTACATTTCA+TGG | 0.352143 | 7_1:+61961019 | Msa1028770:CDS |
| ACCCTTTGTGCTTGTTTACC+AGG | 0.353018 | 7_1:+61958984 | Msa1028770:CDS |
| CCATGAAATGTACATGTTAT+CGG | 0.354805 | 7_1:-61961019 | None:intergenic |
| CAGCAGTAGCGGGACTATTT+GGG | 0.356389 | 7_1:-61961056 | None:intergenic |
| GATAGACCGGTTACATTTAG+AGG | 0.357652 | 7_1:+61961171 | Msa1028770:CDS |
| GATCTCGGTAACATAGTTTC+TGG | 0.357971 | 7_1:+61960877 | Msa1028770:CDS |
| GCTGTATTTGTAGCTGGATT+TGG | 0.358128 | 7_1:-61958644 | None:intergenic |
| TCAAATATTACCACAGATAC+TGG | 0.368279 | 7_1:+61959056 | Msa1028770:CDS |
| TACAATTCTAGTGTGAATAC+AGG | 0.376315 | 7_1:+61962475 | Msa1028770:intron |
| ATCATTAACTCCTCTTGGTC+AGG | 0.389022 | 7_1:-61964348 | None:intergenic |
| TTTCTTAGGTTTATGAGCCT+TGG | 0.397810 | 7_1:+61959212 | Msa1028770:CDS |
| TAACATAGTTTCTGGAAATC+CGG | 0.398968 | 7_1:+61960885 | Msa1028770:CDS |
| TAGTGACAGCTTTACCTTGT+TGG | 0.404150 | 7_1:-61962911 | None:intergenic |
| GGGAGGAACTCGTGAAATAA+AGG | 0.407533 | 7_1:-61961270 | None:intergenic |
| AGTGGTTAGATGAGGAGGAT+TGG | 0.407558 | 7_1:-61964201 | None:intergenic |
| GCTTTAGATCGTGCAAATTA+CGG | 0.408917 | 7_1:-61961239 | None:intergenic |
| TTACAATCATTAACTCCTCT+TGG | 0.410640 | 7_1:-61964353 | None:intergenic |
| ATTAATTGCTTTGGTTCTGT+TGG | 0.418819 | 7_1:+61958773 | Msa1028770:five_prime_UTR |
| GGAAGAGTGGTTAGATGAGG+AGG | 0.418861 | 7_1:-61964206 | None:intergenic |
| CAATAATCATCAAAGAATAT+CGG | 0.420117 | 7_1:-61964503 | None:intergenic |
| TCCCTTGAAAACTCTGTTGA+AGG | 0.423088 | 7_1:+61961330 | Msa1028770:CDS |
| TTCGACTAGGAGGAATACTA+TGG | 0.425566 | 7_1:-61964418 | None:intergenic |
| ATGCAAGAGTGGTTCTGAAA+TGG | 0.427673 | 7_1:+61964090 | Msa1028770:CDS |
| ATAATAGGCTTCTTATATGT+TGG | 0.430710 | 7_1:+61962667 | Msa1028770:CDS |
| TTGATCTCTTTGATATGATC+TGG | 0.431060 | 7_1:-61960744 | None:intergenic |
| ACGAGTATAATGCCATGTTA+AGG | 0.432576 | 7_1:+61964149 | Msa1028770:CDS |
| GGTGTTGCTGTATTTGTAGC+TGG | 0.435290 | 7_1:-61958650 | None:intergenic |
| AAAAGATTCTAACTTAATGA+TGG | 0.436507 | 7_1:-61958884 | None:intergenic |
| TAGTTGTCTTCATCCATTGT+AGG | 0.445858 | 7_1:-61962754 | None:intergenic |
| GTGCAAATTACGGTATATTC+GGG | 0.445963 | 7_1:-61961229 | None:intergenic |
| CACTGCAGATAAAACAGAAA+AGG | 0.448718 | 7_1:-61962280 | None:intergenic |
| GTGAGCTTCCTTGCGGACCT+TGG | 0.448940 | 7_1:+61962300 | Msa1028770:CDS |
| CGAGTATAATGCCATGTTAA+GGG | 0.449482 | 7_1:+61964150 | Msa1028770:CDS |
| ATGATTGTAAAATCTTTAAG+TGG | 0.449559 | 7_1:+61964366 | Msa1028770:three_prime_UTR |
| TGCCTCCCTCTAAATGTAAC+CGG | 0.450494 | 7_1:-61961177 | None:intergenic |
| GTTAATGGAACGCTAAAGAA+TGG | 0.451557 | 7_1:+61961135 | Msa1028770:CDS |
| GTGGCGTGTGGTTTAAACTT+AGG | 0.451946 | 7_1:+61959243 | Msa1028770:CDS |
| TGCCTATGCTAATGCAATAC+AGG | 0.453032 | 7_1:-61962326 | None:intergenic |
| ACTTTACATATTTCCTAAGC+TGG | 0.453508 | 7_1:-61962717 | None:intergenic |
| TTACACTTGAGTGCTATTGT+TGG | 0.458629 | 7_1:-61960979 | None:intergenic |
| GTGTAAAGCTCAAGATAATT+GGG | 0.460038 | 7_1:+61962548 | Msa1028770:CDS |
| GACACTGCATTATGAAAATA+CGG | 0.462073 | 7_1:+61963192 | Msa1028770:CDS |
| TCAAATCCAGGAAGTGTCTC+TGG | 0.475260 | 7_1:-61959104 | None:intergenic |
| GAAAAGTATCCAACTTGCTA+TGG | 0.476797 | 7_1:-61960575 | None:intergenic |
| GACAGCTTTACCTTGTTGGC+AGG | 0.480270 | 7_1:-61962907 | None:intergenic |
| TAGGTGGTTTGTTAGTCGAT+TGG | 0.488159 | 7_1:+61959262 | Msa1028770:CDS |
| GCATTGAAAGCTGCAGTGTA+TGG | 0.489249 | 7_1:+61964448 | Msa1028770:three_prime_UTR |
| TCCTGGTAAACAAGCACAAA+GGG | 0.489276 | 7_1:-61958985 | None:intergenic |
| ATTCCTCCTCCACCTTCACT+AGG | 0.491397 | 7_1:+61963295 | Msa1028770:CDS |
| TTATTTCACGAGTTCCTCCC+TGG | 0.493003 | 7_1:+61961273 | Msa1028770:CDS |
| TTTCTTAGCGATGAAGTAGT+TGG | 0.496770 | 7_1:-61958706 | None:intergenic |
| TTGAACATGAATGATTAAAT+GGG | 0.498233 | 7_1:-61958851 | None:intergenic |
| AAATATGTAAAGTTTACATA+TGG | 0.498234 | 7_1:+61962727 | Msa1028770:CDS |
| ACCAAACGCAAAACTGAACT+TGG | 0.498483 | 7_1:+61960541 | Msa1028770:CDS |
| ACCTTGTTGGCAGGTAAACT+CGG | 0.504168 | 7_1:-61962898 | None:intergenic |
| TTTGGAAGAGTGGTTAGATG+AGG | 0.506773 | 7_1:-61964209 | None:intergenic |
| AACATAGTTTCTGGAAATCC+GGG | 0.507772 | 7_1:+61960886 | Msa1028770:CDS |
| AGCACAAAGGGTGCCATTGT+AGG | 0.508507 | 7_1:-61958973 | None:intergenic |
| TTGTAGGTGATTGAATTTGA+AGG | 0.508622 | 7_1:-61958957 | None:intergenic |
| AGGGACCCAGATGAGAAAGA+AGG | 0.508864 | 7_1:-61958908 | None:intergenic |
| AGCTTCCTTGCGGACCTTGG+TGG | 0.509357 | 7_1:+61962303 | Msa1028770:CDS |
| TACACTGCAGCTTTCAATGC+AGG | 0.515171 | 7_1:-61964445 | None:intergenic |
| TTCTTAAGAGAATCAAATCC+AGG | 0.515515 | 7_1:-61959116 | None:intergenic |
| AAAAGGGAGCTTGTTGTGAT+GGG | 0.519618 | 7_1:+61962788 | Msa1028770:CDS |
| ATGAGCCTTGGTGATGGTCG+TGG | 0.521704 | 7_1:+61959224 | Msa1028770:CDS |
| TGATTGTAAAATCTTTAAGT+GGG | 0.523923 | 7_1:+61964367 | Msa1028770:three_prime_UTR |
| CTCCATGTCATTCAGAAATG+AGG | 0.532193 | 7_1:-61960809 | None:intergenic |
| AGCGATGAAGTAGTTGGTGT+TGG | 0.533554 | 7_1:-61958700 | None:intergenic |
| AGGTTTATGAGCCTTGGTGA+TGG | 0.533683 | 7_1:+61959218 | Msa1028770:CDS |
| GTCACAAGCTGTGTTCTTGG+AGG | 0.541898 | 7_1:+61959148 | Msa1028770:CDS |
| ACTGCAGATAAAACAGAAAA+GGG | 0.541938 | 7_1:-61962279 | None:intergenic |
| TGTGCAAATCTACGTGATCT+CGG | 0.542442 | 7_1:+61960862 | Msa1028770:CDS |
| TCTCTCTGCTTATGTTGTGG+AGG | 0.543333 | 7_1:+61961383 | Msa1028770:CDS |
| TACATATGGCGTTCCTACAA+TGG | 0.546732 | 7_1:+61962741 | Msa1028770:CDS |
| ACTCTTTCGTCAATAAATCC+CGG | 0.547073 | 7_1:-61960904 | None:intergenic |
| GCGTGTGGTTTAAACTTAGG+TGG | 0.547335 | 7_1:+61959246 | Msa1028770:CDS |
| TGAATTCAATCTCGCTTCAA+CGG | 0.549157 | 7_1:+61961086 | Msa1028770:CDS |
| TCATGGAATGGTCCGATGAT+CGG | 0.549630 | 7_1:-61964273 | None:intergenic |
| CATATCAAAGAGATCAATTG+AGG | 0.551013 | 7_1:+61960750 | Msa1028770:CDS |
| CAATGCAGGAATATTCGACT+AGG | 0.554812 | 7_1:-61964431 | None:intergenic |
| GGGACCCAGATGAGAAAGAA+GGG | 0.555871 | 7_1:-61958907 | None:intergenic |
| TGCTTGTAAAATTCATGGAA+TGG | 0.555989 | 7_1:-61964285 | None:intergenic |
| ATACCTAGTGAAGGTGGAGG+AGG | 0.558500 | 7_1:-61963298 | None:intergenic |
| ACAATAGCACTCAAGTGTAA+AGG | 0.559783 | 7_1:+61960982 | Msa1028770:CDS |
| ATTCTTGAGGTTGACATGGT+GGG | 0.562440 | 7_1:-61963249 | None:intergenic |
| AAACGCAAAACTGAACTTGG+TGG | 0.565313 | 7_1:+61960544 | Msa1028770:CDS |
| AATAGTCCCGCTACTGCTGT+TGG | 0.568021 | 7_1:+61961060 | Msa1028770:CDS |
| TCATTGATCAGCAAACCGCT+TGG | 0.568543 | 7_1:+61963154 | Msa1028770:CDS |
| CTTTACACAAAATACAGCAC+TGG | 0.568765 | 7_1:-61964608 | None:intergenic |
| GGTAAAGAAGCTCAGAAATG+AGG | 0.569348 | 7_1:+61962497 | Msa1028770:CDS |
| TACAGCACTGGCTATATACA+AGG | 0.570684 | 7_1:-61964596 | None:intergenic |
| GAGCTTTCTCCATAGCAAGT+TGG | 0.572720 | 7_1:+61960566 | Msa1028770:CDS |
| TTTGAGATTCTTCTGAACAT+CGG | 0.574533 | 7_1:-61964119 | None:intergenic |
| TCATAACCAACAGCAGTAGC+GGG | 0.574581 | 7_1:-61961066 | None:intergenic |
| CTCTTGTCACAACTCAAGCA+AGG | 0.574712 | 7_1:+61960954 | Msa1028770:CDS |
| TAATAATCTTTCCCTTAACA+TGG | 0.579247 | 7_1:-61964161 | None:intergenic |
| ATCTGCAGTGAGCTTCCTTG+CGG | 0.582306 | 7_1:+61962293 | Msa1028770:CDS |
| ACAATTCTAGTGTGAATACA+GGG | 0.582648 | 7_1:+61962476 | Msa1028770:intron |
| TTCATAACCAACAGCAGTAG+CGG | 0.582794 | 7_1:-61961067 | None:intergenic |
| TCAAATTCAATCACCTACAA+TGG | 0.585924 | 7_1:+61958960 | Msa1028770:CDS |
| TCTTTGCATCAACCGATCAT+CGG | 0.588945 | 7_1:+61964261 | Msa1028770:three_prime_UTR |
| ACGACATCAAGAACATGTCC+TGG | 0.595746 | 7_1:-61959002 | None:intergenic |
| ACCGAGTTTACCTGCCAACA+AGG | 0.597089 | 7_1:+61962897 | Msa1028770:CDS |
| TCTTCCAAAATAAAGAGCAA+TGG | 0.597808 | 7_1:+61964223 | Msa1028770:CDS |
| ACGGCAAAGCAGCATAGTGT+TGG | 0.602435 | 7_1:+61963211 | Msa1028770:CDS |
| ATAGACCGGTTACATTTAGA+GGG | 0.604172 | 7_1:+61961172 | Msa1028770:CDS |
| ACAGGCCACCAAGGTCCGCA+AGG | 0.605220 | 7_1:-61962308 | None:intergenic |
| TGCAGGAATATTCGACTAGG+AGG | 0.606318 | 7_1:-61964428 | None:intergenic |
| TTGGTGATGGTCGTGGCGTG+TGG | 0.607994 | 7_1:+61959231 | Msa1028770:CDS |
| TTGATTGAAACCTGACCAAG+AGG | 0.608005 | 7_1:+61964338 | Msa1028770:three_prime_UTR |
| GATTCTTGAGGTTGACATGG+TGG | 0.608815 | 7_1:-61963250 | None:intergenic |
| CACATACCTAGTGAAGGTGG+AGG | 0.611361 | 7_1:-61963301 | None:intergenic |
| ATTGAAAAGAAAATCTGAGA+GGG | 0.611668 | 7_1:-61958927 | None:intergenic |
| TCAATAATAGACGATTCTTG+AGG | 0.615422 | 7_1:-61963262 | None:intergenic |
| TATCACATACCTAGTGAAGG+TGG | 0.617045 | 7_1:-61963304 | None:intergenic |
| TTCTATCACATACCTAGTGA+AGG | 0.621309 | 7_1:-61963307 | None:intergenic |
| TATGATACAGAATGCAAGAG+TGG | 0.623409 | 7_1:+61964079 | Msa1028770:intron |
| AGGACATGTTCTTGATGTCG+TGG | 0.625773 | 7_1:+61959004 | Msa1028770:CDS |
| AGAGCAATGGAACTTAGCAT+AGG | 0.627361 | 7_1:+61964236 | Msa1028770:exon |
| GTGGATCATCACATAAGCGA+AGG | 0.627497 | 7_1:+61962836 | Msa1028770:CDS |
| TATCGGATGAAATCAAAATG+TGG | 0.630322 | 7_1:-61964486 | None:intergenic |
| TTGCATTCAATACAAAGCAG+TGG | 0.632289 | 7_1:+61962817 | Msa1028770:CDS |
| GTCCTGGTAAACAAGCACAA+AGG | 0.632356 | 7_1:-61958986 | None:intergenic |
| GACCGGTTACATTTAGAGGG+AGG | 0.633609 | 7_1:+61961175 | Msa1028770:CDS |
| GTAATCAACACCAGTATCTG+TGG | 0.633899 | 7_1:-61959066 | None:intergenic |
| AACCTCATTTCTGAATGACA+TGG | 0.633930 | 7_1:+61960807 | Msa1028770:CDS |
| GACGATTCTTGAGGTTGACA+TGG | 0.635902 | 7_1:-61963253 | None:intergenic |
| TCTTGTCACAACTCAAGCAA+GGG | 0.641712 | 7_1:+61960955 | Msa1028770:CDS |
| TGACGAAACGTATATGAACA+TGG | 0.642571 | 7_1:-61964571 | None:intergenic |
| GGCCTGTATTGCATTAGCAT+AGG | 0.643277 | 7_1:+61962324 | Msa1028770:CDS |
| GAGAAAATTGATATACAATG+TGG | 0.658958 | 7_1:-61961364 | None:intergenic |
| TAATGCAATACAGGCCACCA+AGG | 0.675200 | 7_1:-61962317 | None:intergenic |
| ACACGCCACGACCATCACCA+AGG | 0.682883 | 7_1:-61959229 | None:intergenic |
| CATTGAAAAGAAAATCTGAG+AGG | 0.687502 | 7_1:-61958928 | None:intergenic |
| TGCAAATTACGGTATATTCG+GGG | 0.713711 | 7_1:-61961228 | None:intergenic |
| GAATCATTCGTAGATCCAAG+CGG | 0.714214 | 7_1:-61963169 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTAATGATTATTTTTGT+GGG | - | chr7_1:61958738-61958757 | None:intergenic | 10.0% |
| !!! | TTATTTAATGATTATTTTTG+TGG | - | chr7_1:61958739-61958758 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAAAACTCTTA+AGG | - | chr7_1:61960290-61960309 | None:intergenic | 10.0% |
| !! | ATTGACTAAATATAAAATAT+GGG | - | chr7_1:61961500-61961519 | None:intergenic | 10.0% |
| !! | AATTGACTAAATATAAAATA+TGG | - | chr7_1:61961501-61961520 | None:intergenic | 10.0% |
| !! | CTAATAAAAATATGATAAAA+TGG | - | chr7_1:61961615-61961634 | None:intergenic | 10.0% |
| !!! | AAATTAATTTTAAAAAGATG+CGG | - | chr7_1:61963118-61963137 | None:intergenic | 10.0% |
| !!! | GTTTGATTAGTTAAATTAAT+TGG | + | chr7_1:61959389-61959408 | Msa1028770:intron | 15.0% |
| !! | TGTTTATAAGTTAAATTAGT+TGG | + | chr7_1:61959471-61959490 | Msa1028770:intron | 15.0% |
| !! | TAACTAAATTATATACACTT+TGG | - | chr7_1:61959667-61959686 | None:intergenic | 15.0% |
| !!! | TAAAGTAGTTTAATTTGTTA+TGG | + | chr7_1:61960317-61960336 | Msa1028770:intron | 15.0% |
| !! | TTGAAATAGAATTACAATAT+AGG | + | chr7_1:61960403-61960422 | Msa1028770:intron | 15.0% |
| !!! | CATTTTAGAAACAAATATAT+AGG | - | chr7_1:61961877-61961896 | None:intergenic | 15.0% |
| !!! | CTATATATTTGTTTCTAAAA+TGG | + | chr7_1:61961875-61961894 | Msa1028770:intron | 15.0% |
| !! | TAAACATTTGTCATATATTA+AGG | + | chr7_1:61962060-61962079 | Msa1028770:intron | 15.0% |
| !!! | ATTTTCTTATTGTCAATAAT+AGG | + | chr7_1:61962623-61962642 | Msa1028770:intron | 15.0% |
| !! | AAATATGTAAAGTTTACATA+TGG | + | chr7_1:61962727-61962746 | Msa1028770:CDS | 15.0% |
| !!! | AGTTTTTCTACTAAAATATA+TGG | + | chr7_1:61963086-61963105 | Msa1028770:intron | 15.0% |
| !! | TATTAAAACAAACAACTAAT+TGG | - | chr7_1:61963653-61963672 | None:intergenic | 15.0% |
| !!! | AATTTTTGAAACTTGAAAAA+AGG | - | chr7_1:61964012-61964031 | None:intergenic | 15.0% |
| !! | ATCCATAAAAGAATAAAAAT+GGG | - | chr7_1:61964707-61964726 | None:intergenic | 15.0% |
| !! | AATCCATAAAAGAATAAAAA+TGG | - | chr7_1:61964708-61964727 | None:intergenic | 15.0% |
| !!! | AAAAGAATTGAATTTTGAGT+AGG | - | chr7_1:61958674-61958693 | None:intergenic | 20.0% |
| !! | AAAAACAACATTAATTGCTT+TGG | + | chr7_1:61958764-61958783 | Msa1028770:five_prime_UTR | 20.0% |
| !! | TTGAACATGAATGATTAAAT+GGG | - | chr7_1:61958854-61958873 | None:intergenic | 20.0% |
| !! | TTTGAACATGAATGATTAAA+TGG | - | chr7_1:61958855-61958874 | None:intergenic | 20.0% |
| !! | AAAAGATTCTAACTTAATGA+TGG | - | chr7_1:61958887-61958906 | None:intergenic | 20.0% |
| !!! | TTTTGTTTTGCTTATTTCTT+AGG | + | chr7_1:61959198-61959217 | Msa1028770:CDS | 20.0% |
| !! | TGTTTATCAGTTAAATTAGT+TGG | + | chr7_1:61959553-61959572 | Msa1028770:intron | 20.0% |
| !!! | TTTTTATCAGTTAAGTTAGT+TGG | + | chr7_1:61959697-61959716 | Msa1028770:intron | 20.0% |
| !! | GTTGTATGTAATTTAGTTAA+AGG | + | chr7_1:61959888-61959907 | Msa1028770:intron | 20.0% |
| !! | TTGTAATGATTGATCAAAAT+AGG | - | chr7_1:61960090-61960109 | None:intergenic | 20.0% |
| !!! | TGAAATCTTAAATTTAGGTT+GGG | - | chr7_1:61960212-61960231 | None:intergenic | 20.0% |
| !! | ATGAAATCTTAAATTTAGGT+TGG | - | chr7_1:61960213-61960232 | None:intergenic | 20.0% |
| !! | GTGAATGAAATCTTAAATTT+AGG | - | chr7_1:61960217-61960236 | None:intergenic | 20.0% |
| !! | AACAAATTTATGAATACAGT+TGG | - | chr7_1:61960257-61960276 | None:intergenic | 20.0% |
| !! | TAGAAATCAAAGCATAATAA+AGG | - | chr7_1:61960669-61960688 | None:intergenic | 20.0% |
| !! | AAATGGAAGAAAATAGTTAA+AGG | - | chr7_1:61961598-61961617 | None:intergenic | 20.0% |
| !! | TTAGAAACAAATATATAGGA+TGG | - | chr7_1:61961873-61961892 | None:intergenic | 20.0% |
| !! | TTTCTATTAAGATTCCATAT+TGG | - | chr7_1:61962193-61962212 | None:intergenic | 20.0% |
| !!! | ATTTTTCTATCTATTGATAC+AGG | + | chr7_1:61962350-61962369 | Msa1028770:CDS | 20.0% |
| !! | ATTCTCGATAATATTCAATT+AGG | + | chr7_1:61962388-61962407 | Msa1028770:intron | 20.0% |
| !!! | TTTTTGAAGAAGTCAATAAT+AGG | + | chr7_1:61962652-61962671 | Msa1028770:intron | 20.0% |
| !! | AACTATGATGAATCTAAAAA+GGG | + | chr7_1:61962772-61962791 | Msa1028770:CDS | 20.0% |
| !!! | CAGAAACAAGTTTTAAATAA+TGG | - | chr7_1:61963961-61963980 | None:intergenic | 20.0% |
| !! | ATGATTGTAAAATCTTTAAG+TGG | + | chr7_1:61964366-61964385 | Msa1028770:three_prime_UTR | 20.0% |
| !! | TGATTGTAAAATCTTTAAGT+GGG | + | chr7_1:61964367-61964386 | Msa1028770:three_prime_UTR | 20.0% |
| !! | CAATAATCATCAAAGAATAT+CGG | - | chr7_1:61964506-61964525 | None:intergenic | 20.0% |
| !!! | TTCCCATTTTTATTCTTTTA+TGG | + | chr7_1:61964702-61964721 | Msa1028770:three_prime_UTR | 20.0% |
| !!! | TTGATCTTGTTTTGATGAAT+TGG | - | chr7_1:61958831-61958850 | None:intergenic | 25.0% |
| ! | ATTGAAAAGAAAATCTGAGA+GGG | - | chr7_1:61958930-61958949 | None:intergenic | 25.0% |
| !!! | GTTAAATTAGTTGGTGTTTT+TGG | + | chr7_1:61959480-61959499 | Msa1028770:intron | 25.0% |
| ! | CAACTAATTTCACTGATAAA+CGG | - | chr7_1:61959781-61959800 | None:intergenic | 25.0% |
| ! | GTTTGATCAGTTAAATTAGT+TGG | + | chr7_1:61959840-61959859 | Msa1028770:intron | 25.0% |
| ! | TCCTATTTATAAGAGAAACT+TGG | + | chr7_1:61960000-61960019 | Msa1028770:intron | 25.0% |
| ! | CCTATTTATAAGAGAAACTT+GGG | + | chr7_1:61960001-61960020 | Msa1028770:intron | 25.0% |
| !!! | AAATCTTAAATTTAGGTTGG+GGG | - | chr7_1:61960210-61960229 | None:intergenic | 25.0% |
| !!! | GAAATCTTAAATTTAGGTTG+GGG | - | chr7_1:61960211-61960230 | None:intergenic | 25.0% |
| !!! | GTGAAATTTTGTTTTCTTGT+AGG | + | chr7_1:61960501-61960520 | Msa1028770:intron | 25.0% |
| !! | TCAACTTTTCAATTTCCATT+AGG | + | chr7_1:61960713-61960732 | Msa1028770:intron | 25.0% |
| ! | GAGAAAATTGATATACAATG+TGG | - | chr7_1:61961367-61961386 | None:intergenic | 25.0% |
| !!! | GTTGATAAAGAGAGTATTTT+GGG | + | chr7_1:61961405-61961424 | Msa1028770:CDS | 25.0% |
| ! | TACTAGTCACTAAATACTAT+CGG | + | chr7_1:61961653-61961672 | Msa1028770:intron | 25.0% |
| !! | CAATTTTCTCAAGATATTAC+TGG | - | chr7_1:61961721-61961740 | None:intergenic | 25.0% |
| ! | TTAAATGTAACCATACATGT+CGG | + | chr7_1:61961746-61961765 | Msa1028770:intron | 25.0% |
| ! | AAACAAATATATAGGATGGA+AGG | - | chr7_1:61961869-61961888 | None:intergenic | 25.0% |
| !!! | GAACTATTTTGTACTAGTTT+AGG | + | chr7_1:61961960-61961979 | Msa1028770:intron | 25.0% |
| !!! | TATTTTGTACTAGTTTAGGT+AGG | + | chr7_1:61961964-61961983 | Msa1028770:intron | 25.0% |
| ! | ATGTTTAGACCAAAAAATCA+TGG | - | chr7_1:61962047-61962066 | None:intergenic | 25.0% |
| ! | TATTAAGATTCCATATTGGT+TGG | - | chr7_1:61962189-61962208 | None:intergenic | 25.0% |
| ! | GTACAAAGTTTGAATTATTG+AGG | - | chr7_1:61962417-61962436 | None:intergenic | 25.0% |
| ! | TCAAACTTTGTACTATATGA+TGG | + | chr7_1:61962424-61962443 | Msa1028770:intron | 25.0% |
| !! | TTTTGCGGTCAATTAAAAAT+CGG | + | chr7_1:61962526-61962545 | Msa1028770:CDS | 25.0% |
| ! | ATAATAGGCTTCTTATATGT+TGG | + | chr7_1:61962667-61962686 | Msa1028770:CDS | 25.0% |
| ! | CAACTATGATGAATCTAAAA+AGG | + | chr7_1:61962771-61962790 | Msa1028770:CDS | 25.0% |
| ! | TTGCTTATATTCGAAACTAT+AGG | + | chr7_1:61963035-61963054 | Msa1028770:intron | 25.0% |
| ! | TGCTTATATTCGAAACTATA+GGG | + | chr7_1:61963036-61963055 | Msa1028770:intron | 25.0% |
| ! | GTATTATAAATAAGATGCAG+AGG | - | chr7_1:61963477-61963496 | None:intergenic | 25.0% |
| ! | ATTAGCATACTGTTAGTAAT+AGG | - | chr7_1:61963622-61963641 | None:intergenic | 25.0% |
| ! | CATTATATCATGACAAAACA+TGG | - | chr7_1:61963823-61963842 | None:intergenic | 25.0% |
| ! | GATATAATGCTATTGAACTT+TGG | + | chr7_1:61963834-61963853 | Msa1028770:intron | 25.0% |
| ! | TCTCTATTACTTACTATCAT+AGG | + | chr7_1:61963864-61963883 | Msa1028770:intron | 25.0% |
| ! | AACACATTATGTCTTTCAAT+TGG | + | chr7_1:61963897-61963916 | Msa1028770:intron | 25.0% |
| ! | AAGTTTCAAAAATTGTACTG+TGG | + | chr7_1:61964018-61964037 | Msa1028770:intron | 25.0% |
| ! | ATACAAGTTATATCCATTGA+AGG | - | chr7_1:61964054-61964073 | None:intergenic | 25.0% |
| ! | TAATAATCTTTCCCTTAACA+TGG | - | chr7_1:61964164-61964183 | None:intergenic | 25.0% |
| !! | ATTAATTGCTTTGGTTCTGT+TGG | + | chr7_1:61958773-61958792 | Msa1028770:five_prime_UTR | 30.0% |
| CATTGAAAAGAAAATCTGAG+AGG | - | chr7_1:61958931-61958950 | None:intergenic | 30.0% | |
| ! | CTCTCAGATTTTCTTTTCAA+TGG | + | chr7_1:61958929-61958948 | Msa1028770:exon | 30.0% |
| TTGTAGGTGATTGAATTTGA+AGG | - | chr7_1:61958960-61958979 | None:intergenic | 30.0% | |
| TCAAATTCAATCACCTACAA+TGG | + | chr7_1:61958960-61958979 | Msa1028770:CDS | 30.0% | |
| TCAAATATTACCACAGATAC+TGG | + | chr7_1:61959056-61959075 | Msa1028770:CDS | 30.0% | |
| TTCTTAAGAGAATCAAATCC+AGG | - | chr7_1:61959119-61959138 | None:intergenic | 30.0% | |
| !!! | TTTGTTTTGCTACTAGACAT+TGG | + | chr7_1:61959288-61959307 | Msa1028770:CDS | 30.0% |
| GTTTCTCTTATAAATAGGAC+CGG | - | chr7_1:61959999-61960018 | None:intergenic | 30.0% | |
| CCCAAGTTTCTCTTATAAAT+AGG | - | chr7_1:61960004-61960023 | None:intergenic | 30.0% | |
| ATATCGAACATAGAGATTCA+GGG | - | chr7_1:61960136-61960155 | None:intergenic | 30.0% | |
| TGACTCATGAAATCAAAGAA+AGG | - | chr7_1:61960169-61960188 | None:intergenic | 30.0% | |
| ! | TTTGATTTCATGAGTCATGA+TGG | + | chr7_1:61960172-61960191 | Msa1028770:intron | 30.0% |
| CTCATTAATATATCCTGACA+AGG | - | chr7_1:61960632-61960651 | None:intergenic | 30.0% | |
| TTGATCTCTTTGATATGATC+TGG | - | chr7_1:61960747-61960766 | None:intergenic | 30.0% | |
| CATATCAAAGAGATCAATTG+AGG | + | chr7_1:61960750-61960769 | Msa1028770:CDS | 30.0% | |
| TTCAGAAATGAGGTTAATTC+TGG | - | chr7_1:61960802-61960821 | None:intergenic | 30.0% | |
| ! | TAACATAGTTTCTGGAAATC+CGG | + | chr7_1:61960885-61960904 | Msa1028770:CDS | 30.0% |
| CCATGAAATGTACATGTTAT+CGG | - | chr7_1:61961022-61961041 | None:intergenic | 30.0% | |
| !!! | AAACACGTGAGTTTTGTTAA+TGG | + | chr7_1:61961120-61961139 | Msa1028770:CDS | 30.0% |
| !!! | GGTTGATAAAGAGAGTATTT+TGG | + | chr7_1:61961404-61961423 | Msa1028770:CDS | 30.0% |
| GACTGCAAAGAAAAAGATAA+AGG | - | chr7_1:61961532-61961551 | None:intergenic | 30.0% | |
| TGACTAGTATGAACAAAGTT+AGG | - | chr7_1:61961642-61961661 | None:intergenic | 30.0% | |
| ATTGAAATTACCAGATCACT+TGG | + | chr7_1:61961991-61962010 | Msa1028770:intron | 30.0% | |
| CACTTGGCAATAGTTAAATT+AGG | + | chr7_1:61962007-61962026 | Msa1028770:intron | 30.0% | |
| ! | TGTCATATATTAAGGTGCTT+TGG | + | chr7_1:61962068-61962087 | Msa1028770:intron | 30.0% |
| ACTGCAGATAAAACAGAAAA+GGG | - | chr7_1:61962282-61962301 | None:intergenic | 30.0% | |
| CACACTAGAATTGTAAAACA+AGG | - | chr7_1:61962470-61962489 | None:intergenic | 30.0% | |
| TACAATTCTAGTGTGAATAC+AGG | + | chr7_1:61962475-61962494 | Msa1028770:intron | 30.0% | |
| ACAATTCTAGTGTGAATACA+GGG | + | chr7_1:61962476-61962495 | Msa1028770:intron | 30.0% | |
| GTGTAAAGCTCAAGATAATT+GGG | + | chr7_1:61962548-61962567 | Msa1028770:CDS | 30.0% | |
| ACTTTACATATTTCCTAAGC+TGG | - | chr7_1:61962720-61962739 | None:intergenic | 30.0% | |
| TTGTGAACTAGAAAAACGAA+CGG | - | chr7_1:61962942-61962961 | None:intergenic | 30.0% | |
| GACACTGCATTATGAAAATA+CGG | + | chr7_1:61963192-61963211 | Msa1028770:CDS | 30.0% | |
| TCAATAATAGACGATTCTTG+AGG | - | chr7_1:61963265-61963284 | None:intergenic | 30.0% | |
| TATTGTCCAGCATACTTATT+AGG | + | chr7_1:61963673-61963692 | Msa1028770:intron | 30.0% | |
| ATATCACCTAATAAGTATGC+TGG | - | chr7_1:61963682-61963701 | None:intergenic | 30.0% | |
| TTTATCTGCTTAATAGCTGT+TGG | + | chr7_1:61963920-61963939 | Msa1028770:intron | 30.0% | |
| ! | TTTGAGATTCTTCTGAACAT+CGG | - | chr7_1:61964122-61964141 | None:intergenic | 30.0% |
| TCTTCCAAAATAAAGAGCAA+TGG | + | chr7_1:61964223-61964242 | Msa1028770:CDS | 30.0% | |
| !! | AGTTCCATTGCTCTTTATTT+TGG | - | chr7_1:61964230-61964249 | None:intergenic | 30.0% |
| TGCTTGTAAAATTCATGGAA+TGG | - | chr7_1:61964288-61964307 | None:intergenic | 30.0% | |
| AACGATGCTTGTAAAATTCA+TGG | - | chr7_1:61964293-61964312 | None:intergenic | 30.0% | |
| TTACAATCATTAACTCCTCT+TGG | - | chr7_1:61964356-61964375 | None:intergenic | 30.0% | |
| TATCGGATGAAATCAAAATG+TGG | - | chr7_1:61964489-61964508 | None:intergenic | 30.0% | |
| ! | GAAAATCATTTTCAGAAGAG+TGG | - | chr7_1:61964552-61964571 | None:intergenic | 30.0% |
| TTTCTTAGCGATGAAGTAGT+TGG | - | chr7_1:61958709-61958728 | None:intergenic | 35.0% | |
| ! | TTTTCCCTTCTTTCTCATCT+GGG | + | chr7_1:61958903-61958922 | Msa1028770:five_prime_UTR | 35.0% |
| TTTCTTAGGTTTATGAGCCT+TGG | + | chr7_1:61959212-61959231 | Msa1028770:CDS | 35.0% | |
| GAGTTATATTATACTCCCTC+CGG | + | chr7_1:61959977-61959996 | Msa1028770:intron | 35.0% | |
| CATATCGAACATAGAGATTC+AGG | - | chr7_1:61960137-61960156 | None:intergenic | 35.0% | |
| CGATAGCAATTTAGACGAAA+AGG | - | chr7_1:61960359-61960378 | None:intergenic | 35.0% | |
| !! | GAAAAGTATCCAACTTGCTA+TGG | - | chr7_1:61960578-61960597 | None:intergenic | 35.0% |
| !! | GCAAGTTGGATACTTTTCAT+TGG | + | chr7_1:61960580-61960599 | Msa1028770:CDS | 35.0% |
| AACCTCATTTCTGAATGACA+TGG | + | chr7_1:61960807-61960826 | Msa1028770:CDS | 35.0% | |
| ! | AACATAGTTTCTGGAAATCC+GGG | + | chr7_1:61960886-61960905 | Msa1028770:CDS | 35.0% |
| ACTCTTTCGTCAATAAATCC+CGG | - | chr7_1:61960907-61960926 | None:intergenic | 35.0% | |
| ! | TTACACTTGAGTGCTATTGT+TGG | - | chr7_1:61960982-61961001 | None:intergenic | 35.0% |
| ACAATAGCACTCAAGTGTAA+AGG | + | chr7_1:61960982-61961001 | Msa1028770:CDS | 35.0% | |
| CCGATAACATGTACATTTCA+TGG | + | chr7_1:61961019-61961038 | Msa1028770:CDS | 35.0% | |
| TGAATTCAATCTCGCTTCAA+CGG | + | chr7_1:61961086-61961105 | Msa1028770:CDS | 35.0% | |
| GTTAATGGAACGCTAAAGAA+TGG | + | chr7_1:61961135-61961154 | Msa1028770:CDS | 35.0% | |
| !! | AAGCACTTTTGATGATAGAC+CGG | + | chr7_1:61961158-61961177 | Msa1028770:CDS | 35.0% |
| ATAGACCGGTTACATTTAGA+GGG | + | chr7_1:61961172-61961191 | Msa1028770:CDS | 35.0% | |
| TGCAAATTACGGTATATTCG+GGG | - | chr7_1:61961231-61961250 | None:intergenic | 35.0% | |
| GTGCAAATTACGGTATATTC+GGG | - | chr7_1:61961232-61961251 | None:intergenic | 35.0% | |
| CGTGCAAATTACGGTATATT+CGG | - | chr7_1:61961233-61961252 | None:intergenic | 35.0% | |
| ! | GCTTTAGATCGTGCAAATTA+CGG | - | chr7_1:61961242-61961261 | None:intergenic | 35.0% |
| TATCACGAAAAACTGAACCA+GGG | - | chr7_1:61961293-61961312 | None:intergenic | 35.0% | |
| ! | TCCTTCAACAGAGTTTTCAA+GGG | - | chr7_1:61961334-61961353 | None:intergenic | 35.0% |
| ! | TTTTCTCTCTGCTTATGTTG+TGG | + | chr7_1:61961380-61961399 | Msa1028770:CDS | 35.0% |
| CATGAGAAAAAAAAGCCTTG+AGG | - | chr7_1:61961554-61961573 | None:intergenic | 35.0% | |
| AAGTTCAACCATCAAATCCT+TGG | + | chr7_1:61961833-61961852 | Msa1028770:intron | 35.0% | |
| TTAGAGATCCAAGGATTTGA+TGG | - | chr7_1:61961844-61961863 | None:intergenic | 35.0% | |
| TTAACTATTGCCAAGTGATC+TGG | - | chr7_1:61962004-61962023 | None:intergenic | 35.0% | |
| CCAAAAAATCATGGCTCAAT+TGG | - | chr7_1:61962038-61962057 | None:intergenic | 35.0% | |
| !!! | CCAATTGAGCCATGATTTTT+TGG | + | chr7_1:61962035-61962054 | Msa1028770:intron | 35.0% |
| !!! | GTTAGCTTTTGGAGTTGAAT+TGG | - | chr7_1:61962122-61962141 | None:intergenic | 35.0% |
| GATCATAGATCCAACCAATA+TGG | + | chr7_1:61962176-61962195 | Msa1028770:intron | 35.0% | |
| CACTGCAGATAAAACAGAAA+AGG | - | chr7_1:61962283-61962302 | None:intergenic | 35.0% | |
| ! | GAAATGAGGATAGTGTTTTG+CGG | + | chr7_1:61962511-61962530 | Msa1028770:CDS | 35.0% |
| GGTGTAAAGCTCAAGATAAT+TGG | + | chr7_1:61962547-61962566 | Msa1028770:CDS | 35.0% | |
| !! | TTTCTGCTTTTAACCAGCTT+AGG | + | chr7_1:61962704-61962723 | Msa1028770:CDS | 35.0% |
| TAGTTGTCTTCATCCATTGT+AGG | - | chr7_1:61962757-61962776 | None:intergenic | 35.0% | |
| TTGCATTCAATACAAAGCAG+TGG | + | chr7_1:61962817-61962836 | Msa1028770:CDS | 35.0% | |
| TTCTATCACATACCTAGTGA+AGG | - | chr7_1:61963310-61963329 | None:intergenic | 35.0% | |
| ATTGGGATAAAGGATAGGTA+GGG | - | chr7_1:61963435-61963454 | None:intergenic | 35.0% | |
| TAAGATGCAGAGGAAAAGAA+AGG | - | chr7_1:61963467-61963486 | None:intergenic | 35.0% | |
| GACTTCTATGTAACAGCTAT+AGG | - | chr7_1:61963505-61963524 | None:intergenic | 35.0% | |
| GTTAGTAATAGGACTCCTAA+GGG | - | chr7_1:61963611-61963630 | None:intergenic | 35.0% | |
| TGTTAGTAATAGGACTCCTA+AGG | - | chr7_1:61963612-61963631 | None:intergenic | 35.0% | |
| CAAGAGAGACATTTATGATG+GGG | - | chr7_1:61963797-61963816 | None:intergenic | 35.0% | |
| CCAAGAGAGACATTTATGAT+GGG | - | chr7_1:61963798-61963817 | None:intergenic | 35.0% | |
| TATGATACAGAATGCAAGAG+TGG | + | chr7_1:61964079-61964098 | Msa1028770:intron | 35.0% | |
| ACGAGTATAATGCCATGTTA+AGG | + | chr7_1:61964149-61964168 | Msa1028770:CDS | 35.0% | |
| CGAGTATAATGCCATGTTAA+GGG | + | chr7_1:61964150-61964169 | Msa1028770:CDS | 35.0% | |
| !!! | TGCTCTTTATTTTGGAAGAG+TGG | - | chr7_1:61964222-61964241 | None:intergenic | 35.0% |
| !!! | GCATCGTTTTAGCTTAACAA+TGG | + | chr7_1:61964305-61964324 | Msa1028770:three_prime_UTR | 35.0% |
| !!! | GGAATACTATGGTTTTGAAG+AGG | - | chr7_1:61964410-61964429 | None:intergenic | 35.0% |
| ! | TCATTTTCAGAAGAGTGGTA+AGG | - | chr7_1:61964547-61964566 | None:intergenic | 35.0% |
| TGACGAAACGTATATGAACA+TGG | - | chr7_1:61964574-61964593 | None:intergenic | 35.0% | |
| CTTTACACAAAATACAGCAC+TGG | - | chr7_1:61964611-61964630 | None:intergenic | 35.0% | |
| ! | CAGTGCTGTATTTTGTGTAA+AGG | + | chr7_1:61964609-61964628 | Msa1028770:three_prime_UTR | 35.0% |
| ! | GTATTTTGTGTAAAGGAGAG+TGG | + | chr7_1:61964616-61964635 | Msa1028770:three_prime_UTR | 35.0% |
| !!! | GGCACTAAATTTGTTTTTGC+AGG | + | chr7_1:61964637-61964656 | Msa1028770:three_prime_UTR | 35.0% |
| GCTGTATTTGTAGCTGGATT+TGG | - | chr7_1:61958647-61958666 | None:intergenic | 40.0% | |
| ! | CTTTTCCCTTCTTTCTCATC+TGG | + | chr7_1:61958902-61958921 | Msa1028770:five_prime_UTR | 40.0% |
| TCCTGGTAAACAAGCACAAA+GGG | - | chr7_1:61958988-61959007 | None:intergenic | 40.0% | |
| GTAATCAACACCAGTATCTG+TGG | - | chr7_1:61959069-61959088 | None:intergenic | 40.0% | |
| !! | TAGGTGGTTTGTTAGTCGAT+TGG | + | chr7_1:61959262-61959281 | Msa1028770:CDS | 40.0% |
| ! | TTTTGCTACTAGACATTGGC+TGG | + | chr7_1:61959292-61959311 | Msa1028770:CDS | 40.0% |
| CTCTTATAAATAGGACCGGA+GGG | - | chr7_1:61959995-61960014 | None:intergenic | 40.0% | |
| TCTCTTATAAATAGGACCGG+AGG | - | chr7_1:61959996-61960015 | None:intergenic | 40.0% | |
| AACATAGAGATTCAGGGAGA+AGG | - | chr7_1:61960130-61960149 | None:intergenic | 40.0% | |
| CAATATAGGCATGCTCATGT+AGG | + | chr7_1:61960417-61960436 | Msa1028770:intron | 40.0% | |
| ACCAAACGCAAAACTGAACT+TGG | + | chr7_1:61960541-61960560 | Msa1028770:CDS | 40.0% | |
| ! | ACCAAGTTCAGTTTTGCGTT+TGG | - | chr7_1:61960545-61960564 | None:intergenic | 40.0% |
| AAACGCAAAACTGAACTTGG+TGG | + | chr7_1:61960544-61960563 | Msa1028770:CDS | 40.0% | |
| GATCTGGTATAGCAACCTAA+TGG | - | chr7_1:61960731-61960750 | None:intergenic | 40.0% | |
| CTCCATGTCATTCAGAAATG+AGG | - | chr7_1:61960812-61960831 | None:intergenic | 40.0% | |
| TGTGCAAATCTACGTGATCT+CGG | + | chr7_1:61960862-61960881 | Msa1028770:CDS | 40.0% | |
| GATCTCGGTAACATAGTTTC+TGG | + | chr7_1:61960877-61960896 | Msa1028770:CDS | 40.0% | |
| TCTTGTCACAACTCAAGCAA+GGG | + | chr7_1:61960955-61960974 | Msa1028770:CDS | 40.0% | |
| TTCATAACCAACAGCAGTAG+CGG | - | chr7_1:61961070-61961089 | None:intergenic | 40.0% | |
| GATAGACCGGTTACATTTAG+AGG | + | chr7_1:61961171-61961190 | Msa1028770:CDS | 40.0% | |
| GTATCACGAAAAACTGAACC+AGG | - | chr7_1:61961294-61961313 | None:intergenic | 40.0% | |
| TCCCTTGAAAACTCTGTTGA+AGG | + | chr7_1:61961330-61961349 | Msa1028770:CDS | 40.0% | |
| ! | GTCCTTCAACAGAGTTTTCA+AGG | - | chr7_1:61961335-61961354 | None:intergenic | 40.0% |
| !!! | AAAGAGAGTATTTTGGGTCC+TGG | + | chr7_1:61961411-61961430 | Msa1028770:CDS | 40.0% |
| GATACAGAAAGATGCTTACC+AGG | - | chr7_1:61961432-61961451 | None:intergenic | 40.0% | |
| ! | CTTTTTCTTTGCAGTCCTCA+AGG | + | chr7_1:61961536-61961555 | Msa1028770:intron | 40.0% |
| CTTCAGATAGAAGACGTATC+TGG | - | chr7_1:61961781-61961800 | None:intergenic | 40.0% | |
| CAACTCCAAAAGCTAACTAC+AGG | + | chr7_1:61962125-61962144 | Msa1028770:intron | 40.0% | |
| TCCAAAAGCTAACTACAGGA+GGG | + | chr7_1:61962129-61962148 | Msa1028770:intron | 40.0% | |
| ! | GGAGGGACAATTTTTCTATG+AGG | + | chr7_1:61962146-61962165 | Msa1028770:intron | 40.0% |
| TCAACAGTGTGCACAAAAAC+TGG | - | chr7_1:61962252-61962271 | None:intergenic | 40.0% | |
| TGCCTATGCTAATGCAATAC+AGG | - | chr7_1:61962329-61962348 | None:intergenic | 40.0% | |
| GGTAAAGAAGCTCAGAAATG+AGG | + | chr7_1:61962497-61962516 | Msa1028770:CDS | 40.0% | |
| TACATATGGCGTTCCTACAA+TGG | + | chr7_1:61962741-61962760 | Msa1028770:CDS | 40.0% | |
| !! | AAAAAGGGAGCTTGTTGTGA+TGG | + | chr7_1:61962787-61962806 | Msa1028770:CDS | 40.0% |
| !! | AAAAGGGAGCTTGTTGTGAT+GGG | + | chr7_1:61962788-61962807 | Msa1028770:CDS | 40.0% |
| TAGTGACAGCTTTACCTTGT+TGG | - | chr7_1:61962914-61962933 | None:intergenic | 40.0% | |
| TTACTAATGTCAGTCACACG+TGG | + | chr7_1:61962962-61962981 | Msa1028770:intron | 40.0% | |
| GAATCATTCGTAGATCCAAG+CGG | - | chr7_1:61963172-61963191 | None:intergenic | 40.0% | |
| ATTCTTGAGGTTGACATGGT+GGG | - | chr7_1:61963252-61963271 | None:intergenic | 40.0% | |
| TATCACATACCTAGTGAAGG+TGG | - | chr7_1:61963307-61963326 | None:intergenic | 40.0% | |
| CCAAGACTCTCGAATTTCTT+GGG | - | chr7_1:61963376-61963395 | None:intergenic | 40.0% | |
| ACCAAGACTCTCGAATTTCT+TGG | - | chr7_1:61963377-61963396 | None:intergenic | 40.0% | |
| GATTGGGATAAAGGATAGGT+AGG | - | chr7_1:61963436-61963455 | None:intergenic | 40.0% | |
| !! | AAGAAAGGCATTCAGGGATT+GGG | - | chr7_1:61963452-61963471 | None:intergenic | 40.0% |
| !! | AAAGAAAGGCATTCAGGGAT+TGG | - | chr7_1:61963453-61963472 | None:intergenic | 40.0% |
| !! | GAGGAAAAGAAAGGCATTCA+GGG | - | chr7_1:61963458-61963477 | None:intergenic | 40.0% |
| !! | AGAGGAAAAGAAAGGCATTC+AGG | - | chr7_1:61963459-61963478 | None:intergenic | 40.0% |
| CCCATCATAAATGTCTCTCT+TGG | + | chr7_1:61963795-61963814 | Msa1028770:intron | 40.0% | |
| GCCAAGAGAGACATTTATGA+TGG | - | chr7_1:61963799-61963818 | None:intergenic | 40.0% | |
| ! | TGGTGTTTTGCTACCTTCAA+TGG | + | chr7_1:61964038-61964057 | Msa1028770:intron | 40.0% |
| !! | ATGCAAGAGTGGTTCTGAAA+TGG | + | chr7_1:61964090-61964109 | Msa1028770:CDS | 40.0% |
| TTTGGAAGAGTGGTTAGATG+AGG | - | chr7_1:61964212-61964231 | None:intergenic | 40.0% | |
| AGAGCAATGGAACTTAGCAT+AGG | + | chr7_1:61964236-61964255 | Msa1028770:exon | 40.0% | |
| TCTTTGCATCAACCGATCAT+CGG | + | chr7_1:61964261-61964280 | Msa1028770:three_prime_UTR | 40.0% | |
| TTGATTGAAACCTGACCAAG+AGG | + | chr7_1:61964338-61964357 | Msa1028770:three_prime_UTR | 40.0% | |
| ATCATTAACTCCTCTTGGTC+AGG | - | chr7_1:61964351-61964370 | None:intergenic | 40.0% | |
| TTCGACTAGGAGGAATACTA+TGG | - | chr7_1:61964421-61964440 | None:intergenic | 40.0% | |
| CAATGCAGGAATATTCGACT+AGG | - | chr7_1:61964434-61964453 | None:intergenic | 40.0% | |
| !! | TACAGCACTGGCTATATACA+AGG | - | chr7_1:61964599-61964618 | None:intergenic | 40.0% |
| !! | GGTGTTGCTGTATTTGTAGC+TGG | - | chr7_1:61958653-61958672 | None:intergenic | 45.0% |
| ! | AGCGATGAAGTAGTTGGTGT+TGG | - | chr7_1:61958703-61958722 | None:intergenic | 45.0% |
| ACCCTTTGTGCTTGTTTACC+AGG | + | chr7_1:61958984-61959003 | Msa1028770:CDS | 45.0% | |
| GTCCTGGTAAACAAGCACAA+AGG | - | chr7_1:61958989-61959008 | None:intergenic | 45.0% | |
| ACGACATCAAGAACATGTCC+TGG | - | chr7_1:61959005-61959024 | None:intergenic | 45.0% | |
| AGGACATGTTCTTGATGTCG+TGG | + | chr7_1:61959004-61959023 | Msa1028770:CDS | 45.0% | |
| !! | TCAAATCCAGGAAGTGTCTC+TGG | - | chr7_1:61959107-61959126 | None:intergenic | 45.0% |
| ACAGTCACAAGCTGTGTTCT+TGG | + | chr7_1:61959145-61959164 | Msa1028770:CDS | 45.0% | |
| CACTTGTCATGCTTCTCTCT+TGG | + | chr7_1:61959174-61959193 | Msa1028770:CDS | 45.0% | |
| AGGTTTATGAGCCTTGGTGA+TGG | + | chr7_1:61959218-61959237 | Msa1028770:CDS | 45.0% | |
| GTGGCGTGTGGTTTAAACTT+AGG | + | chr7_1:61959243-61959262 | Msa1028770:CDS | 45.0% | |
| GCGTGTGGTTTAAACTTAGG+TGG | + | chr7_1:61959246-61959265 | Msa1028770:CDS | 45.0% | |
| GAGCTTTCTCCATAGCAAGT+TGG | + | chr7_1:61960566-61960585 | Msa1028770:CDS | 45.0% | |
| TGAGTCTTCGATACCTTGTC+AGG | + | chr7_1:61960616-61960635 | Msa1028770:intron | 45.0% | |
| CTCTTGTCACAACTCAAGCA+AGG | + | chr7_1:61960954-61960973 | Msa1028770:CDS | 45.0% | |
| TCATAACCAACAGCAGTAGC+GGG | - | chr7_1:61961069-61961088 | None:intergenic | 45.0% | |
| TGCCTCCCTCTAAATGTAAC+CGG | - | chr7_1:61961180-61961199 | None:intergenic | 45.0% | |
| GGGAGGAACTCGTGAAATAA+AGG | - | chr7_1:61961273-61961292 | None:intergenic | 45.0% | |
| TTATTTCACGAGTTCCTCCC+TGG | + | chr7_1:61961273-61961292 | Msa1028770:CDS | 45.0% | |
| TCTCTCTGCTTATGTTGTGG+AGG | + | chr7_1:61961383-61961402 | Msa1028770:CDS | 45.0% | |
| ! | GTGTCGACATTTCAGTGTCA+TGG | - | chr7_1:61961699-61961718 | None:intergenic | 45.0% |
| TGTAACCATACATGTCGGTG+TGG | + | chr7_1:61961751-61961770 | Msa1028770:intron | 45.0% | |
| GTAACCATACATGTCGGTGT+GGG | + | chr7_1:61961752-61961771 | Msa1028770:intron | 45.0% | |
| TGGAAGGTCTTAGAGATCCA+AGG | - | chr7_1:61961853-61961872 | None:intergenic | 45.0% | |
| CTCCAAAAGCTAACTACAGG+AGG | + | chr7_1:61962128-61962147 | Msa1028770:intron | 45.0% | |
| !!! | TCCCTCCTGTAGTTAGCTTT+TGG | - | chr7_1:61962133-61962152 | None:intergenic | 45.0% |
| TAATGCAATACAGGCCACCA+AGG | - | chr7_1:61962320-61962339 | None:intergenic | 45.0% | |
| GGCCTGTATTGCATTAGCAT+AGG | + | chr7_1:61962324-61962343 | Msa1028770:CDS | 45.0% | |
| GTGGATCATCACATAAGCGA+AGG | + | chr7_1:61962836-61962855 | Msa1028770:CDS | 45.0% | |
| ACCTTGTTGGCAGGTAAACT+CGG | - | chr7_1:61962901-61962920 | None:intergenic | 45.0% | |
| TCATTGATCAGCAAACCGCT+TGG | + | chr7_1:61963154-61963173 | Msa1028770:CDS | 45.0% | |
| GATTCTTGAGGTTGACATGG+TGG | - | chr7_1:61963253-61963272 | None:intergenic | 45.0% | |
| GACGATTCTTGAGGTTGACA+TGG | - | chr7_1:61963256-61963275 | None:intergenic | 45.0% | |
| CCCAAGAAATTCGAGAGTCT+TGG | + | chr7_1:61963373-61963392 | Msa1028770:intron | 45.0% | |
| AAGCTCTCGAATTCTTGGAG+GGG | - | chr7_1:61963405-61963424 | None:intergenic | 45.0% | |
| CAAGCTCTCGAATTCTTGGA+GGG | - | chr7_1:61963406-61963425 | None:intergenic | 45.0% | |
| AGACCAAGCTCTCGAATTCT+TGG | - | chr7_1:61963410-61963429 | None:intergenic | 45.0% | |
| CAGGGATTGGGATAAAGGAT+AGG | - | chr7_1:61963440-61963459 | None:intergenic | 45.0% | |
| GCATTCAGGGATTGGGATAA+AGG | - | chr7_1:61963445-61963464 | None:intergenic | 45.0% | |
| ! | CATTTATGATGGGGAGACAG+TGG | - | chr7_1:61963788-61963807 | None:intergenic | 45.0% |
| AGTGGTTAGATGAGGAGGAT+TGG | - | chr7_1:61964204-61964223 | None:intergenic | 45.0% | |
| TCATGGAATGGTCCGATGAT+CGG | - | chr7_1:61964276-61964295 | None:intergenic | 45.0% | |
| TGCAGGAATATTCGACTAGG+AGG | - | chr7_1:61964431-61964450 | None:intergenic | 45.0% | |
| TACACTGCAGCTTTCAATGC+AGG | - | chr7_1:61964448-61964467 | None:intergenic | 45.0% | |
| GCATTGAAAGCTGCAGTGTA+TGG | + | chr7_1:61964448-61964467 | Msa1028770:three_prime_UTR | 45.0% | |
| GGGACCCAGATGAGAAAGAA+GGG | - | chr7_1:61958910-61958929 | None:intergenic | 50.0% | |
| AGGGACCCAGATGAGAAAGA+AGG | - | chr7_1:61958911-61958930 | None:intergenic | 50.0% | |
| !! | AGCACAAAGGGTGCCATTGT+AGG | - | chr7_1:61958976-61958995 | None:intergenic | 50.0% |
| GTCACAAGCTGTGTTCTTGG+AGG | + | chr7_1:61959148-61959167 | Msa1028770:CDS | 50.0% | |
| ! | CAGCAGTAGCGGGACTATTT+GGG | - | chr7_1:61961059-61961078 | None:intergenic | 50.0% |
| ! | ACAGCAGTAGCGGGACTATT+TGG | - | chr7_1:61961060-61961079 | None:intergenic | 50.0% |
| AATAGTCCCGCTACTGCTGT+TGG | + | chr7_1:61961060-61961079 | Msa1028770:CDS | 50.0% | |
| GACCGGTTACATTTAGAGGG+AGG | + | chr7_1:61961175-61961194 | Msa1028770:CDS | 50.0% | |
| CACGAAAAACTGAACCAGGG+AGG | - | chr7_1:61961290-61961309 | None:intergenic | 50.0% | |
| TGGCAGTGTCAGTGCTTCAT+AGG | - | chr7_1:61961679-61961698 | None:intergenic | 50.0% | |
| ATCTGCAGTGAGCTTCCTTG+CGG | + | chr7_1:61962293-61962312 | Msa1028770:CDS | 50.0% | |
| ACCGAGTTTACCTGCCAACA+AGG | + | chr7_1:61962897-61962916 | Msa1028770:CDS | 50.0% | |
| GACAGCTTTACCTTGTTGGC+AGG | - | chr7_1:61962910-61962929 | None:intergenic | 50.0% | |
| !! | GCGGTTTGCTGATCAATGAC+TGG | - | chr7_1:61963153-61963172 | None:intergenic | 50.0% |
| ACGGCAAAGCAGCATAGTGT+TGG | + | chr7_1:61963211-61963230 | Msa1028770:CDS | 50.0% | |
| ATTCCTCCTCCACCTTCACT+AGG | + | chr7_1:61963295-61963314 | Msa1028770:CDS | 50.0% | |
| ATACCTAGTGAAGGTGGAGG+AGG | - | chr7_1:61963301-61963320 | None:intergenic | 50.0% | |
| CACATACCTAGTGAAGGTGG+AGG | - | chr7_1:61963304-61963323 | None:intergenic | 50.0% | |
| CCAAGCTCTCGAATTCTTGG+AGG | - | chr7_1:61963407-61963426 | None:intergenic | 50.0% | |
| CCTCCAAGAATTCGAGAGCT+TGG | + | chr7_1:61963404-61963423 | Msa1028770:intron | 50.0% | |
| GGAAGAGTGGTTAGATGAGG+AGG | - | chr7_1:61964209-61964228 | None:intergenic | 50.0% | |
| AAGCTGCCAGAGACACTTCC+TGG | + | chr7_1:61959098-61959117 | Msa1028770:CDS | 55.0% | |
| !! | ATGAGCCTTGGTGATGGTCG+TGG | + | chr7_1:61959224-61959243 | Msa1028770:CDS | 55.0% |
| GTGTCCCACACCGACATGTA+TGG | - | chr7_1:61961759-61961778 | None:intergenic | 55.0% | |
| ACACGCCACGACCATCACCA+AGG | - | chr7_1:61959232-61959251 | None:intergenic | 60.0% | |
| !! | TTGGTGATGGTCGTGGCGTG+TGG | + | chr7_1:61959231-61959250 | Msa1028770:CDS | 60.0% |
| GTGAGCTTCCTTGCGGACCT+TGG | + | chr7_1:61962300-61962319 | Msa1028770:CDS | 60.0% | |
| AGCTTCCTTGCGGACCTTGG+TGG | + | chr7_1:61962303-61962322 | Msa1028770:CDS | 60.0% | |
| ACAGGCCACCAAGGTCCGCA+AGG | - | chr7_1:61962311-61962330 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 61958608 | 61964764 | 61958608 | ID=Msa1028770;Name=Msa1028770 |
| chr7_1 | mRNA | 61958608 | 61964764 | 61958608 | ID=Msa1028770-mRNA-1;Parent=Msa1028770;Name=Msa1028770-mRNA-1;_AED=0.06;_eAED=0.08;_QI=340|0.71|0.75|1|1|1|8|512|649 |
| chr7_1 | exon | 61958608 | 61959313 | 61958608 | ID=Msa1028770-mRNA-1:exon:13063;Parent=Msa1028770-mRNA-1 |
| chr7_1 | exon | 61960523 | 61960614 | 61960523 | ID=Msa1028770-mRNA-1:exon:13064;Parent=Msa1028770-mRNA-1 |
| chr7_1 | exon | 61960735 | 61961432 | 61960735 | ID=Msa1028770-mRNA-1:exon:13065;Parent=Msa1028770-mRNA-1 |
| chr7_1 | exon | 61962253 | 61962371 | 61962253 | ID=Msa1028770-mRNA-1:exon:13066;Parent=Msa1028770-mRNA-1 |
| chr7_1 | exon | 61962486 | 61962575 | 61962486 | ID=Msa1028770-mRNA-1:exon:13067;Parent=Msa1028770-mRNA-1 |
| chr7_1 | exon | 61962661 | 61962918 | 61962661 | ID=Msa1028770-mRNA-1:exon:13068;Parent=Msa1028770-mRNA-1 |
| chr7_1 | exon | 61963154 | 61963316 | 61963154 | ID=Msa1028770-mRNA-1:exon:13069;Parent=Msa1028770-mRNA-1 |
| chr7_1 | exon | 61964089 | 61964764 | 61964089 | ID=Msa1028770-mRNA-1:exon:13070;Parent=Msa1028770-mRNA-1 |
| chr7_1 | five_prime_UTR | 61958608 | 61958947 | 61958608 | ID=Msa1028770-mRNA-1:five_prime_utr;Parent=Msa1028770-mRNA-1 |
| chr7_1 | CDS | 61958948 | 61959313 | 61958948 | ID=Msa1028770-mRNA-1:cds;Parent=Msa1028770-mRNA-1 |
| chr7_1 | CDS | 61960523 | 61960614 | 61960523 | ID=Msa1028770-mRNA-1:cds;Parent=Msa1028770-mRNA-1 |
| chr7_1 | CDS | 61960735 | 61961432 | 61960735 | ID=Msa1028770-mRNA-1:cds;Parent=Msa1028770-mRNA-1 |
| chr7_1 | CDS | 61962253 | 61962371 | 61962253 | ID=Msa1028770-mRNA-1:cds;Parent=Msa1028770-mRNA-1 |
| chr7_1 | CDS | 61962486 | 61962575 | 61962486 | ID=Msa1028770-mRNA-1:cds;Parent=Msa1028770-mRNA-1 |
| chr7_1 | CDS | 61962661 | 61962918 | 61962661 | ID=Msa1028770-mRNA-1:cds;Parent=Msa1028770-mRNA-1 |
| chr7_1 | CDS | 61963154 | 61963316 | 61963154 | ID=Msa1028770-mRNA-1:cds;Parent=Msa1028770-mRNA-1 |
| chr7_1 | CDS | 61964089 | 61964252 | 61964089 | ID=Msa1028770-mRNA-1:cds;Parent=Msa1028770-mRNA-1 |
| chr7_1 | three_prime_UTR | 61964253 | 61964764 | 61964253 | ID=Msa1028770-mRNA-1:three_prime_utr;Parent=Msa1028770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
