Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1067900 | XP_003624126.1 | 95.498 | 622 | 19 | 1 | 1 | 622 | 1 | 613 | 0.0 | 1226 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1067900 | G7KQL6 | 95.498 | 622 | 19 | 1 | 1 | 622 | 1 | 613 | 0.0 | 1226 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1028770 | Msa1067900 | 0.803788 | 2.949373e-49 | -8.615850e-47 |
| Msa1067900 | Msa1395590 | 0.980326 | 5.819551e-150 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1067900 | MtrunA17_Chr7g0249061 | 95.498 | 622 | 19 | 1 | 1 | 622 | 1 | 613 | 0.0 | 1226 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1067900 | AT5G16520.1 | 56.149 | 618 | 234 | 8 | 1 | 608 | 1 | 591 | 0.0 | 709 |
| Msa1067900 | AT5G16520.2 | 65.479 | 449 | 145 | 2 | 1 | 448 | 1 | 440 | 0.0 | 640 |
Find 145 sgRNAs with CRISPR-Local
Find 289 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTTCCATTGCTCTTTATTT+TGG | 0.166778 | 7_2:-62848799 | None:intergenic |
| ACAGCAGTAGCGGGACTATT+TGG | 0.178995 | 7_2:-62845966 | None:intergenic |
| CAACTATGATGAATCTAAAA+AGG | 0.223608 | 7_2:+62847658 | Msa1067900:CDS |
| GGTTGATAAAGAGAGTATTT+TGG | 0.245485 | 7_2:+62846313 | Msa1067900:CDS |
| TCAAATCCAGGAAGTGTTTC+TGG | 0.259839 | 7_2:-62844090 | None:intergenic |
| TTCAGAAATGAGGTTAATTC+TGG | 0.294018 | 7_2:-62845708 | None:intergenic |
| GGTGTAAAGCTCAAGATAAT+TGG | 0.296124 | 7_2:+62847434 | Msa1067900:CDS |
| AACGATGCTTGTAAAATTCA+TGG | 0.301107 | 7_2:-62848862 | None:intergenic |
| ACAGTCACAAGCTGTGTTCT+TGG | 0.320746 | 7_2:+62844131 | Msa1067900:CDS |
| CGTGCAAATTACGGTATATT+CGG | 0.323620 | 7_2:-62846139 | None:intergenic |
| ACCCTTTGTGCTTGTTTACC+AGG | 0.324368 | 7_2:+62843970 | Msa1067900:CDS |
| CCGATAACATGTACATTTCA+TGG | 0.352143 | 7_2:+62845928 | Msa1067900:CDS |
| CCATGAAATGTACATGTTAT+CGG | 0.354805 | 7_2:-62845928 | None:intergenic |
| CAGCAGTAGCGGGACTATTT+GGG | 0.356389 | 7_2:-62845965 | None:intergenic |
| GATAGACCGGTTACATTTAG+AGG | 0.357652 | 7_2:+62846080 | Msa1067900:CDS |
| GATCTCGGTAACATAGTTTC+TGG | 0.357971 | 7_2:+62845786 | Msa1067900:CDS |
| GCTGTATTTGTAGCTGGATT+TGG | 0.358128 | 7_2:-62843630 | None:intergenic |
| AAGCTGCCAGAAACACTTCC+TGG | 0.362286 | 7_2:+62844084 | Msa1067900:CDS |
| TTTGAACATGAATGATGAAA+TGG | 0.364195 | 7_2:-62843838 | None:intergenic |
| TCAAATATTACCACAGATAC+TGG | 0.368279 | 7_2:+62844042 | Msa1067900:CDS |
| TACAATTCTAGTGTGAATAC+AGG | 0.376315 | 7_2:+62847362 | Msa1067900:intron |
| CACTAGTCATGCTTCTCTCT+TGG | 0.381743 | 7_2:+62844160 | Msa1067900:CDS |
| ATCATTAACTCCTCTTGGTC+AGG | 0.389022 | 7_2:-62848920 | None:intergenic |
| TTTCTTAGGTTTATGAGCCT+TGG | 0.397810 | 7_2:+62844198 | Msa1067900:CDS |
| TAACATAGTTTCTGGAAATC+CGG | 0.398968 | 7_2:+62845794 | Msa1067900:CDS |
| TAGTGACAGCTTTACCTTGT+TGG | 0.404150 | 7_2:-62847798 | None:intergenic |
| GGGAGGAACTCGTGAAATAA+AGG | 0.407533 | 7_2:-62846179 | None:intergenic |
| AGTGGTTAGATGAGGAGGAT+TGG | 0.407558 | 7_2:-62848773 | None:intergenic |
| GCTTTAGATCGTGCAAATTA+CGG | 0.408917 | 7_2:-62846148 | None:intergenic |
| TTACAATCATTAACTCCTCT+TGG | 0.410640 | 7_2:-62848925 | None:intergenic |
| GGAAGAGTGGTTAGATGAGG+AGG | 0.418861 | 7_2:-62848778 | None:intergenic |
| CAATAATCATCAAAGAATAT+CGG | 0.420117 | 7_2:-62849075 | None:intergenic |
| TCCCTTGAAAACTCTGTTGA+AGG | 0.423088 | 7_2:+62846239 | Msa1067900:CDS |
| TTCGACTAGGAGGAATACTA+TGG | 0.425566 | 7_2:-62848990 | None:intergenic |
| ATGCAAGAGTGGTTCTGAAA+TGG | 0.427673 | 7_2:+62848662 | Msa1067900:CDS |
| TTGATCTCTTTGATATGATC+TGG | 0.431060 | 7_2:-62845653 | None:intergenic |
| ACGAGTATAATGCCATGTTA+AGG | 0.432576 | 7_2:+62848721 | Msa1067900:CDS |
| GGTGTTGCTGTATTTGTAGC+TGG | 0.435290 | 7_2:-62843636 | None:intergenic |
| TAGTTGTCTTCATCCATTGT+AGG | 0.445858 | 7_2:-62847641 | None:intergenic |
| GTGCAAATTACGGTATATTC+GGG | 0.445963 | 7_2:-62846138 | None:intergenic |
| GTGAGCTTCCTTGCGGACCT+TGG | 0.448940 | 7_2:+62847187 | Msa1067900:intron |
| CGAGTATAATGCCATGTTAA+GGG | 0.449482 | 7_2:+62848722 | Msa1067900:CDS |
| ATGATTGTAAAATCTTTAAG+TGG | 0.449559 | 7_2:+62848938 | Msa1067900:three_prime_UTR |
| TGCCTCCCTCTAAATGTAAC+CGG | 0.450494 | 7_2:-62846086 | None:intergenic |
| GTTAATGGAACGCTAAAGAA+TGG | 0.451557 | 7_2:+62846044 | Msa1067900:CDS |
| GTGGCGTGTGGTTTAAACTT+AGG | 0.451946 | 7_2:+62844229 | Msa1067900:CDS |
| AAAAGATTCTAACTTGATGA+TGG | 0.452592 | 7_2:-62843870 | None:intergenic |
| TGCCTATGCTAATGCAATAC+AGG | 0.453032 | 7_2:-62847213 | None:intergenic |
| TACACTGCATTATGAAAATA+CGG | 0.455311 | 7_2:+62848079 | Msa1067900:CDS |
| TTACACTTGAGTGCTATTGT+TGG | 0.458629 | 7_2:-62845888 | None:intergenic |
| GTGTAAAGCTCAAGATAATT+GGG | 0.460038 | 7_2:+62847435 | Msa1067900:CDS |
| CCCTGGTAAACAAGCACAAA+GGG | 0.473078 | 7_2:-62843971 | None:intergenic |
| GAAAAGTATCCAACTTGCTA+TGG | 0.476797 | 7_2:-62845484 | None:intergenic |
| GACAGCTTTACCTTGTTGGC+AGG | 0.480270 | 7_2:-62847794 | None:intergenic |
| TAGGTGGTTTGTTAGTCGAT+TGG | 0.488159 | 7_2:+62844248 | Msa1067900:CDS |
| GCATTGAAAGCTGCAGTGTA+TGG | 0.489249 | 7_2:+62849020 | Msa1067900:three_prime_UTR |
| ATTCCTCCTCCACCTTCACT+AGG | 0.491397 | 7_2:+62848182 | Msa1067900:CDS |
| TTATTTCACGAGTTCCTCCC+TGG | 0.493003 | 7_2:+62846182 | Msa1067900:CDS |
| TTTCTTAGCGATGAAGTAGT+TGG | 0.496770 | 7_2:-62843692 | None:intergenic |
| TTGAACATGAATGATGAAAT+GGG | 0.498482 | 7_2:-62843837 | None:intergenic |
| ACCAAACGCAAAACTGAACT+TGG | 0.498483 | 7_2:+62845450 | Msa1067900:CDS |
| CCCTTTGTGCTTGTTTACCA+GGG | 0.501452 | 7_2:+62843971 | Msa1067900:CDS |
| ACCTTGTTGGCAGGTAAACT+CGG | 0.504168 | 7_2:-62847785 | None:intergenic |
| TTTGGAAGAGTGGTTAGATG+AGG | 0.506773 | 7_2:-62848781 | None:intergenic |
| AACATAGTTTCTGGAAATCC+GGG | 0.507772 | 7_2:+62845795 | Msa1067900:CDS |
| AGCACAAAGGGTGCCATTGT+AGG | 0.508507 | 7_2:-62843959 | None:intergenic |
| TTGTAGGTGATTGAATTTGA+AGG | 0.508622 | 7_2:-62843943 | None:intergenic |
| AGGGACCCAGATGAGAAAGA+AGG | 0.508864 | 7_2:-62843894 | None:intergenic |
| AGCTTCCTTGCGGACCTTGG+TGG | 0.509357 | 7_2:+62847190 | Msa1067900:CDS |
| TACACTGCAGCTTTCAATGC+AGG | 0.515171 | 7_2:-62849017 | None:intergenic |
| TTCTTAAGAGAATCAAATCC+AGG | 0.515515 | 7_2:-62844102 | None:intergenic |
| AAAAGGGAGCTTGTTGTGAT+GGG | 0.519618 | 7_2:+62847675 | Msa1067900:CDS |
| ATGAGCCTTGGTGATGGTCG+TGG | 0.521704 | 7_2:+62844210 | Msa1067900:CDS |
| TGATTGTAAAATCTTTAAGT+GGG | 0.523923 | 7_2:+62848939 | Msa1067900:three_prime_UTR |
| CTCCATGTCATTCAGAAATG+AGG | 0.532193 | 7_2:-62845718 | None:intergenic |
| AGCGATGAAGTAGTTGGTGT+TGG | 0.533554 | 7_2:-62843686 | None:intergenic |
| AGGTTTATGAGCCTTGGTGA+TGG | 0.533683 | 7_2:+62844204 | Msa1067900:CDS |
| GTCACAAGCTGTGTTCTTGG+AGG | 0.541898 | 7_2:+62844134 | Msa1067900:CDS |
| TGTGCAAATCTACGTGATCT+CGG | 0.542442 | 7_2:+62845771 | Msa1067900:CDS |
| TCTCTCTGCTTATGTTGTGG+AGG | 0.543333 | 7_2:+62846292 | Msa1067900:CDS |
| AAATATGTAAAGTTTACCTA+TGG | 0.546166 | 7_2:+62847614 | Msa1067900:CDS |
| ACTCTTTCGTCAATAAATCC+CGG | 0.547073 | 7_2:-62845813 | None:intergenic |
| GCGTGTGGTTTAAACTTAGG+TGG | 0.547335 | 7_2:+62844232 | Msa1067900:CDS |
| TGAATTCAATCTCGCTTCAA+CGG | 0.549157 | 7_2:+62845995 | Msa1067900:CDS |
| TCATGGAATGGTCCGATGAT+CGG | 0.549630 | 7_2:-62848845 | None:intergenic |
| CATATCAAAGAGATCAATTG+AGG | 0.551013 | 7_2:+62845659 | Msa1067900:CDS |
| ATACCTAGTGAAGGTGGAGG+AGG | 0.553881 | 7_2:-62848185 | None:intergenic |
| CAATGCAGGAATATTCGACT+AGG | 0.554812 | 7_2:-62849003 | None:intergenic |
| GGGACCCAGATGAGAAAGAA+GGG | 0.555871 | 7_2:-62843893 | None:intergenic |
| TGCTTGTAAAATTCATGGAA+TGG | 0.555989 | 7_2:-62848857 | None:intergenic |
| TACCTATGGCGTTCCTACAA+TGG | 0.557289 | 7_2:+62847628 | Msa1067900:CDS |
| ACAATAGCACTCAAGTGTAA+AGG | 0.559783 | 7_2:+62845891 | Msa1067900:CDS |
| ATTCTTGAGGTTGACATGGT+GGG | 0.562440 | 7_2:-62848136 | None:intergenic |
| AAACGCAAAACTGAACTTGG+TGG | 0.565313 | 7_2:+62845453 | Msa1067900:CDS |
| AATAGTCCCGCTACTGCTGT+TGG | 0.568021 | 7_2:+62845969 | Msa1067900:CDS |
| TCATTGATCAGCAAACCGCT+TGG | 0.568543 | 7_2:+62848041 | Msa1067900:CDS |
| CTTTACACAAAATACAGCAC+TGG | 0.568765 | 7_2:-62849180 | None:intergenic |
| GGTAAAGAAGCTCAGAAATG+AGG | 0.569348 | 7_2:+62847384 | Msa1067900:CDS |
| TACAGCACTGGCTATATACA+AGG | 0.570684 | 7_2:-62849168 | None:intergenic |
| GAGCTTTCTCCATAGCAAGT+TGG | 0.572720 | 7_2:+62845475 | Msa1067900:CDS |
| TTTGAGATTCTTCTGAACAT+CGG | 0.574533 | 7_2:-62848691 | None:intergenic |
| TCATAACCAACAGCAGTAGC+GGG | 0.574581 | 7_2:-62845975 | None:intergenic |
| CTCTTGTCACAACTCAAGCA+AGG | 0.574712 | 7_2:+62845863 | Msa1067900:CDS |
| TAATAATCTTTCCCTTAACA+TGG | 0.579247 | 7_2:-62848733 | None:intergenic |
| ATCTGCAGTGAGCTTCCTTG+CGG | 0.582306 | 7_2:+62847180 | Msa1067900:intron |
| ACAATTCTAGTGTGAATACA+GGG | 0.582648 | 7_2:+62847363 | Msa1067900:intron |
| TTCATAACCAACAGCAGTAG+CGG | 0.582794 | 7_2:-62845976 | None:intergenic |
| TCAAATTCAATCACCTACAA+TGG | 0.585924 | 7_2:+62843946 | Msa1067900:CDS |
| ATCCATTGTAGGAACGCCAT+AGG | 0.586263 | 7_2:-62847630 | None:intergenic |
| GATACAGAAAGATGCTTACC+AGG | 0.587041 | 7_2:-62846338 | None:intergenic |
| TCTTTGCATCAACCGATCAT+CGG | 0.588945 | 7_2:+62848833 | Msa1067900:three_prime_UTR |
| GTTATTAGCATACCTAGTGA+AGG | 0.591508 | 7_2:-62848194 | None:intergenic |
| ACCGAGTTTACCTGCCAACA+AGG | 0.597089 | 7_2:+62847784 | Msa1067900:CDS |
| TCTTCCAAAATAAAGAGCAA+TGG | 0.597808 | 7_2:+62848795 | Msa1067900:CDS |
| ACGGCAAAGCAGCATAGTGT+TGG | 0.602435 | 7_2:+62848098 | Msa1067900:CDS |
| ATAGACCGGTTACATTTAGA+GGG | 0.604172 | 7_2:+62846081 | Msa1067900:CDS |
| ACAGGCCACCAAGGTCCGCA+AGG | 0.605220 | 7_2:-62847195 | None:intergenic |
| TGCAGGAATATTCGACTAGG+AGG | 0.606318 | 7_2:-62849000 | None:intergenic |
| TTGGTGATGGTCGTGGCGTG+TGG | 0.607994 | 7_2:+62844217 | Msa1067900:CDS |
| TTGATTGAAACCTGACCAAG+AGG | 0.608005 | 7_2:+62848910 | Msa1067900:three_prime_UTR |
| GATTCTTGAGGTTGACATGG+TGG | 0.608815 | 7_2:-62848137 | None:intergenic |
| ATTGAAAAGAAAATCTGAGA+GGG | 0.611668 | 7_2:-62843913 | None:intergenic |
| ACAACATCAAGAACATGCCC+TGG | 0.615401 | 7_2:-62843988 | None:intergenic |
| TCAATAATAGACGATTCTTG+AGG | 0.615422 | 7_2:-62848149 | None:intergenic |
| TATGATGCAGAATGCAAGAG+TGG | 0.623409 | 7_2:+62848651 | Msa1067900:intron |
| AGCATACCTAGTGAAGGTGG+AGG | 0.623423 | 7_2:-62848188 | None:intergenic |
| ATTAGCATACCTAGTGAAGG+TGG | 0.626551 | 7_2:-62848191 | None:intergenic |
| AGAGCAATGGAACTTAGCAT+AGG | 0.627361 | 7_2:+62848808 | Msa1067900:exon |
| GTGGATCATCACATAAGCGA+AGG | 0.627497 | 7_2:+62847723 | Msa1067900:CDS |
| TATCGGATGAAATCAAAATG+TGG | 0.630322 | 7_2:-62849058 | None:intergenic |
| TTGCATTCAATACAAAGCAG+TGG | 0.632289 | 7_2:+62847704 | Msa1067900:CDS |
| GACCGGTTACATTTAGAGGG+AGG | 0.633609 | 7_2:+62846084 | Msa1067900:CDS |
| GTAATCAACACCAGTATCTG+TGG | 0.633899 | 7_2:-62844052 | None:intergenic |
| AACCTCATTTCTGAATGACA+TGG | 0.633930 | 7_2:+62845716 | Msa1067900:CDS |
| GACGATTCTTGAGGTTGACA+TGG | 0.635902 | 7_2:-62848140 | None:intergenic |
| GCCCTGGTAAACAAGCACAA+AGG | 0.639289 | 7_2:-62843972 | None:intergenic |
| TCTTGTCACAACTCAAGCAA+GGG | 0.641712 | 7_2:+62845864 | Msa1067900:CDS |
| GGCCTGTATTGCATTAGCAT+AGG | 0.643277 | 7_2:+62847211 | Msa1067900:CDS |
| TGACGAAACATATATGAACA+TGG | 0.657800 | 7_2:-62849143 | None:intergenic |
| GAGAAAATTGATATACAATG+TGG | 0.658958 | 7_2:-62846273 | None:intergenic |
| TAATGCAATACAGGCCACCA+AGG | 0.675200 | 7_2:-62847204 | None:intergenic |
| ACACGCCACGACCATCACCA+AGG | 0.682883 | 7_2:-62844215 | None:intergenic |
| GAATCATTCGTAGATCCAAG+CGG | 0.684534 | 7_2:-62848056 | None:intergenic |
| CATTGAAAAGAAAATCTGAG+AGG | 0.697366 | 7_2:-62843914 | None:intergenic |
| TGCAAATTACGGTATATTCG+GGG | 0.713711 | 7_2:-62846137 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTAATGATTATTTTTGT+GGG | - | chr7_2:62843724-62843743 | None:intergenic | 10.0% |
| !!! | TTATTTAATGATTATTTTTG+TGG | - | chr7_2:62843725-62843744 | None:intergenic | 10.0% |
| !! | ATTGACTAAATATAAAATAT+GGG | - | chr7_2:62846409-62846428 | None:intergenic | 10.0% |
| !! | AATTGACTAAATATAAAATA+TGG | - | chr7_2:62846410-62846429 | None:intergenic | 10.0% |
| !! | CTAATAAAAATATGATAAAA+TGG | - | chr7_2:62846525-62846544 | None:intergenic | 10.0% |
| !!! | AAATTAATTTTAAAAAGATG+CGG | - | chr7_2:62848005-62848024 | None:intergenic | 10.0% |
| !!! | GTTTGATTAGTTAAATTAAT+TGG | + | chr7_2:62844360-62844379 | Msa1067900:intron | 15.0% |
| !! | TGTTTATAAGTTAAATTAGT+TGG | + | chr7_2:62844442-62844461 | Msa1067900:intron | 15.0% |
| !! | TAACTAAATTATATACACTT+TGG | - | chr7_2:62844638-62844657 | None:intergenic | 15.0% |
| !!! | TAAAGTAGTTTAATTTGTTA+TGG | + | chr7_2:62845226-62845245 | Msa1067900:intron | 15.0% |
| !! | TTGAAATAGAATTACAATAT+AGG | + | chr7_2:62845312-62845331 | Msa1067900:intron | 15.0% |
| !!! | CATTTTAGAAACAAATATAT+AGG | - | chr7_2:62846765-62846784 | None:intergenic | 15.0% |
| !!! | CTATATATTTGTTTCTAAAA+TGG | + | chr7_2:62846763-62846782 | Msa1067900:intron | 15.0% |
| !! | TAAACATTTGTCATATATTA+AGG | + | chr7_2:62846949-62846968 | Msa1067900:intron | 15.0% |
| !!! | ATTTTCTTATTGTCAATAAT+AGG | + | chr7_2:62847510-62847529 | Msa1067900:intron | 15.0% |
| !!! | AGTTTTTCTACTAAAATATA+TGG | + | chr7_2:62847973-62847992 | Msa1067900:intron | 15.0% |
| !! | TATTAAAACAAACAACTAAT+TGG | - | chr7_2:62848225-62848244 | None:intergenic | 15.0% |
| !! | ATCCATAAAAGAATAAAAAT+GGG | - | chr7_2:62849279-62849298 | None:intergenic | 15.0% |
| !! | AATCCATAAAAGAATAAAAA+TGG | - | chr7_2:62849280-62849299 | None:intergenic | 15.0% |
| !!! | AAAAGAATTGAATTTTGAGT+AGG | - | chr7_2:62843660-62843679 | None:intergenic | 20.0% |
| !! | AAAAACAACATTAATTGCTT+TGG | + | chr7_2:62843750-62843769 | Msa1067900:five_prime_UTR | 20.0% |
| !!! | TTTTGTTTTGCTTATTTCTT+AGG | + | chr7_2:62844184-62844203 | Msa1067900:CDS | 20.0% |
| !! | TGTTTATCAGTTAAATTAGT+TGG | + | chr7_2:62844524-62844543 | Msa1067900:intron | 20.0% |
| !!! | TTTTTATCAGTTAAGTTAGT+TGG | + | chr7_2:62844668-62844687 | Msa1067900:intron | 20.0% |
| !! | GTTGTATGTAATTTAGTTAA+AGG | + | chr7_2:62844859-62844878 | Msa1067900:intron | 20.0% |
| !! | TTGTAATGATTGATCAAAAT+AGG | - | chr7_2:62845001-62845020 | None:intergenic | 20.0% |
| !!! | TGAAATCTTAAATTTAGGTT+GGG | - | chr7_2:62845125-62845144 | None:intergenic | 20.0% |
| !! | ATGAAATCTTAAATTTAGGT+TGG | - | chr7_2:62845126-62845145 | None:intergenic | 20.0% |
| !! | GTGAATGAAATCTTAAATTT+AGG | - | chr7_2:62845130-62845149 | None:intergenic | 20.0% |
| !! | AACAAATTTATGAATACAGT+TGG | - | chr7_2:62845170-62845189 | None:intergenic | 20.0% |
| !! | GCAAAAAAAAAAAACTCTTA+AGG | - | chr7_2:62845203-62845222 | None:intergenic | 20.0% |
| !! | AAATGGAAGAAAATAGTTAA+AGG | - | chr7_2:62846508-62846527 | None:intergenic | 20.0% |
| !! | TTAGAAACAAATATATAGGA+TGG | - | chr7_2:62846761-62846780 | None:intergenic | 20.0% |
| !! | TTTCTATTAAGATTCCATAT+TGG | - | chr7_2:62847080-62847099 | None:intergenic | 20.0% |
| !!! | ATTTTTCTATCTATTGATAC+AGG | + | chr7_2:62847237-62847256 | Msa1067900:CDS | 20.0% |
| !! | ATTCTCGATAATATTCAATT+AGG | + | chr7_2:62847275-62847294 | Msa1067900:intron | 20.0% |
| !!! | TTTTTGAAGAAGTCAATAAT+AGG | + | chr7_2:62847539-62847558 | Msa1067900:intron | 20.0% |
| !! | AAATATGTAAAGTTTACCTA+TGG | + | chr7_2:62847614-62847633 | Msa1067900:CDS | 20.0% |
| !! | AACTATGATGAATCTAAAAA+GGG | + | chr7_2:62847659-62847678 | Msa1067900:CDS | 20.0% |
| !!! | TTGCTTATATTTGAAACTAT+AGG | + | chr7_2:62847922-62847941 | Msa1067900:intron | 20.0% |
| !!! | TGCTTATATTTGAAACTATA+GGG | + | chr7_2:62847923-62847942 | Msa1067900:intron | 20.0% |
| !!! | CAGAAACAAGTTTTAAATAA+TGG | - | chr7_2:62848533-62848552 | None:intergenic | 20.0% |
| !! | ATGATTGTAAAATCTTTAAG+TGG | + | chr7_2:62848938-62848957 | Msa1067900:three_prime_UTR | 20.0% |
| !! | TGATTGTAAAATCTTTAAGT+GGG | + | chr7_2:62848939-62848958 | Msa1067900:three_prime_UTR | 20.0% |
| !! | CAATAATCATCAAAGAATAT+CGG | - | chr7_2:62849078-62849097 | None:intergenic | 20.0% |
| !!! | TTCCCATTTTTATTCTTTTA+TGG | + | chr7_2:62849274-62849293 | Msa1067900:three_prime_UTR | 20.0% |
| !!! | TTGATCTTGTTTTGATGAAT+TGG | - | chr7_2:62843817-62843836 | None:intergenic | 25.0% |
| ! | TTGAACATGAATGATGAAAT+GGG | - | chr7_2:62843840-62843859 | None:intergenic | 25.0% |
| ! | TTTGAACATGAATGATGAAA+TGG | - | chr7_2:62843841-62843860 | None:intergenic | 25.0% |
| ! | AAAAGATTCTAACTTGATGA+TGG | - | chr7_2:62843873-62843892 | None:intergenic | 25.0% |
| ! | ATTGAAAAGAAAATCTGAGA+GGG | - | chr7_2:62843916-62843935 | None:intergenic | 25.0% |
| !!! | GTTAAATTAGTTGGTGTTTT+TGG | + | chr7_2:62844451-62844470 | Msa1067900:intron | 25.0% |
| ! | CAACTAATTTCACTGATAAA+CGG | - | chr7_2:62844752-62844771 | None:intergenic | 25.0% |
| ! | GTTTGATCAGTTAAATTAGT+TGG | + | chr7_2:62844811-62844830 | Msa1067900:intron | 25.0% |
| !!! | AAATCTTAAATTTAGGTTGG+GGG | - | chr7_2:62845123-62845142 | None:intergenic | 25.0% |
| !!! | GAAATCTTAAATTTAGGTTG+GGG | - | chr7_2:62845124-62845143 | None:intergenic | 25.0% |
| !!! | GTGAAATTTTGTTTTCTTGT+AGG | + | chr7_2:62845410-62845429 | Msa1067900:intron | 25.0% |
| ! | TAGAAATCAAAGCGTAATAA+AGG | - | chr7_2:62845578-62845597 | None:intergenic | 25.0% |
| ! | GAGAAAATTGATATACAATG+TGG | - | chr7_2:62846276-62846295 | None:intergenic | 25.0% |
| !!! | GTTGATAAAGAGAGTATTTT+GGG | + | chr7_2:62846314-62846333 | Msa1067900:CDS | 25.0% |
| ! | TACTAGTCACTAAATACTAT+CGG | + | chr7_2:62846563-62846582 | Msa1067900:intron | 25.0% |
| !! | CAATTTTCTCAAGATATTAC+TGG | - | chr7_2:62846631-62846650 | None:intergenic | 25.0% |
| ! | AAACAAATATATAGGATGGA+AGG | - | chr7_2:62846757-62846776 | None:intergenic | 25.0% |
| !!! | GAACTATTTTGTACTAGTTT+AGG | + | chr7_2:62846849-62846868 | Msa1067900:intron | 25.0% |
| !!! | TATTTTGTACTAGTTTAGGT+AGG | + | chr7_2:62846853-62846872 | Msa1067900:intron | 25.0% |
| ! | ATGTTTAGACCAAAAAATCA+TGG | - | chr7_2:62846936-62846955 | None:intergenic | 25.0% |
| ! | TATTAAGATTCCATATTGGT+CGG | - | chr7_2:62847076-62847095 | None:intergenic | 25.0% |
| ! | GTACAAAGTTTGAATTATTG+AGG | - | chr7_2:62847304-62847323 | None:intergenic | 25.0% |
| ! | TCAAACTTTGTACTATATGA+TGG | + | chr7_2:62847311-62847330 | Msa1067900:intron | 25.0% |
| !! | TTTTGCGGTCAATTAAAAAT+CGG | + | chr7_2:62847413-62847432 | Msa1067900:CDS | 25.0% |
| ! | ATAATAGGCTTCTTATATGT+TGG | + | chr7_2:62847554-62847573 | Msa1067900:intron | 25.0% |
| ! | CAACTATGATGAATCTAAAA+AGG | + | chr7_2:62847658-62847677 | Msa1067900:CDS | 25.0% |
| ! | TTATGAACTAGAAAAACGAA+CGG | - | chr7_2:62847829-62847848 | None:intergenic | 25.0% |
| ! | TACACTGCATTATGAAAATA+CGG | + | chr7_2:62848079-62848098 | Msa1067900:CDS | 25.0% |
| ! | CATTATATCATGACAAAACA+TGG | - | chr7_2:62848395-62848414 | None:intergenic | 25.0% |
| ! | GATATAATGCTATTGAACTT+TGG | + | chr7_2:62848406-62848425 | Msa1067900:intron | 25.0% |
| ! | TCTCTATTACTTACTATCAT+AGG | + | chr7_2:62848436-62848455 | Msa1067900:intron | 25.0% |
| ! | AACACATTATGTCTTTCAAT+TGG | + | chr7_2:62848469-62848488 | Msa1067900:intron | 25.0% |
| ! | ATACAAGTTATATCCATTGA+AGG | - | chr7_2:62848626-62848645 | None:intergenic | 25.0% |
| ! | TAATAATCTTTCCCTTAACA+TGG | - | chr7_2:62848736-62848755 | None:intergenic | 25.0% |
| CATTGAAAAGAAAATCTGAG+AGG | - | chr7_2:62843917-62843936 | None:intergenic | 30.0% | |
| ! | CTCTCAGATTTTCTTTTCAA+TGG | + | chr7_2:62843915-62843934 | Msa1067900:exon | 30.0% |
| TTGTAGGTGATTGAATTTGA+AGG | - | chr7_2:62843946-62843965 | None:intergenic | 30.0% | |
| TCAAATTCAATCACCTACAA+TGG | + | chr7_2:62843946-62843965 | Msa1067900:CDS | 30.0% | |
| TCAAATATTACCACAGATAC+TGG | + | chr7_2:62844042-62844061 | Msa1067900:CDS | 30.0% | |
| TTCTTAAGAGAATCAAATCC+AGG | - | chr7_2:62844105-62844124 | None:intergenic | 30.0% | |
| !!! | TTTGTTTTGCTACTAGACAT+TGG | + | chr7_2:62844274-62844293 | Msa1067900:CDS | 30.0% |
| ATCGAACATATAGAGATTCA+GGG | - | chr7_2:62845047-62845066 | None:intergenic | 30.0% | |
| TATCGAACATATAGAGATTC+AGG | - | chr7_2:62845048-62845067 | None:intergenic | 30.0% | |
| TGACTCATGAAATCAAAGAA+AGG | - | chr7_2:62845082-62845101 | None:intergenic | 30.0% | |
| ! | TTTGATTTCATGAGTCATGA+TGG | + | chr7_2:62845085-62845104 | Msa1067900:intron | 30.0% |
| CTCATTAATATATCCTGACA+AGG | - | chr7_2:62845541-62845560 | None:intergenic | 30.0% | |
| TCAACTTTCCAATTTCCATT+AGG | + | chr7_2:62845622-62845641 | Msa1067900:intron | 30.0% | |
| TATAGCAACCTAATGGAAAT+TGG | - | chr7_2:62845633-62845652 | None:intergenic | 30.0% | |
| TTGATCTCTTTGATATGATC+TGG | - | chr7_2:62845656-62845675 | None:intergenic | 30.0% | |
| CATATCAAAGAGATCAATTG+AGG | + | chr7_2:62845659-62845678 | Msa1067900:CDS | 30.0% | |
| TTCAGAAATGAGGTTAATTC+TGG | - | chr7_2:62845711-62845730 | None:intergenic | 30.0% | |
| ! | TAACATAGTTTCTGGAAATC+CGG | + | chr7_2:62845794-62845813 | Msa1067900:CDS | 30.0% |
| CCATGAAATGTACATGTTAT+CGG | - | chr7_2:62845931-62845950 | None:intergenic | 30.0% | |
| !!! | AAACACGTGAGTTTTGTTAA+TGG | + | chr7_2:62846029-62846048 | Msa1067900:CDS | 30.0% |
| !!! | GGTTGATAAAGAGAGTATTT+TGG | + | chr7_2:62846313-62846332 | Msa1067900:CDS | 30.0% |
| GACTGCAAAGAAAAAGATAA+AGG | - | chr7_2:62846441-62846460 | None:intergenic | 30.0% | |
| ATGAGAAAAAAAAAGCCTTG+AGG | - | chr7_2:62846463-62846482 | None:intergenic | 30.0% | |
| TGACTAGTATGAACAAAGTT+AGG | - | chr7_2:62846552-62846571 | None:intergenic | 30.0% | |
| ATTGAAATTACCAGATCACT+TGG | + | chr7_2:62846880-62846899 | Msa1067900:intron | 30.0% | |
| CACTTGGCAATAGTTAAATT+AGG | + | chr7_2:62846896-62846915 | Msa1067900:intron | 30.0% | |
| ! | TGTCATATATTAAGGTGCTT+TGG | + | chr7_2:62846957-62846976 | Msa1067900:intron | 30.0% |
| ACTGCAGATAAAACAGAAAA+GGG | - | chr7_2:62847169-62847188 | None:intergenic | 30.0% | |
| CACACTAGAATTGTAAAACA+AGG | - | chr7_2:62847357-62847376 | None:intergenic | 30.0% | |
| TACAATTCTAGTGTGAATAC+AGG | + | chr7_2:62847362-62847381 | Msa1067900:intron | 30.0% | |
| ACAATTCTAGTGTGAATACA+GGG | + | chr7_2:62847363-62847382 | Msa1067900:intron | 30.0% | |
| GTGTAAAGCTCAAGATAATT+GGG | + | chr7_2:62847435-62847454 | Msa1067900:CDS | 30.0% | |
| ACTTTACATATTTCCTAAGC+TGG | - | chr7_2:62847607-62847626 | None:intergenic | 30.0% | |
| TCAATAATAGACGATTCTTG+AGG | - | chr7_2:62848152-62848171 | None:intergenic | 30.0% | |
| TATTGTCCAGCATACTTATT+AGG | + | chr7_2:62848245-62848264 | Msa1067900:intron | 30.0% | |
| ATATCACCTAATAAGTATGC+TGG | - | chr7_2:62848254-62848273 | None:intergenic | 30.0% | |
| ! | TTTGAGATTCTTCTGAACAT+CGG | - | chr7_2:62848694-62848713 | None:intergenic | 30.0% |
| TCTTCCAAAATAAAGAGCAA+TGG | + | chr7_2:62848795-62848814 | Msa1067900:CDS | 30.0% | |
| !! | AGTTCCATTGCTCTTTATTT+TGG | - | chr7_2:62848802-62848821 | None:intergenic | 30.0% |
| TGCTTGTAAAATTCATGGAA+TGG | - | chr7_2:62848860-62848879 | None:intergenic | 30.0% | |
| AACGATGCTTGTAAAATTCA+TGG | - | chr7_2:62848865-62848884 | None:intergenic | 30.0% | |
| TTACAATCATTAACTCCTCT+TGG | - | chr7_2:62848928-62848947 | None:intergenic | 30.0% | |
| TATCGGATGAAATCAAAATG+TGG | - | chr7_2:62849061-62849080 | None:intergenic | 30.0% | |
| ! | GAAAATCATTTTCAGAAGAG+TGG | - | chr7_2:62849124-62849143 | None:intergenic | 30.0% |
| TGACGAAACATATATGAACA+TGG | - | chr7_2:62849146-62849165 | None:intergenic | 30.0% | |
| ! | GTATTTTGTGTAAAGGATAG+TGG | + | chr7_2:62849188-62849207 | Msa1067900:three_prime_UTR | 30.0% |
| TTTCTTAGCGATGAAGTAGT+TGG | - | chr7_2:62843695-62843714 | None:intergenic | 35.0% | |
| ! | TTTTCCCTTCTTTCTCATCT+GGG | + | chr7_2:62843889-62843908 | Msa1067900:five_prime_UTR | 35.0% |
| TTTCTTAGGTTTATGAGCCT+TGG | + | chr7_2:62844198-62844217 | Msa1067900:CDS | 35.0% | |
| CGATAGCAATTTAGACGAAA+AGG | - | chr7_2:62845268-62845287 | None:intergenic | 35.0% | |
| !! | GAAAAGTATCCAACTTGCTA+TGG | - | chr7_2:62845487-62845506 | None:intergenic | 35.0% |
| !! | GCAAGTTGGATACTTTTCAT+TGG | + | chr7_2:62845489-62845508 | Msa1067900:CDS | 35.0% |
| AACCTCATTTCTGAATGACA+TGG | + | chr7_2:62845716-62845735 | Msa1067900:CDS | 35.0% | |
| ! | AACATAGTTTCTGGAAATCC+GGG | + | chr7_2:62845795-62845814 | Msa1067900:CDS | 35.0% |
| ACTCTTTCGTCAATAAATCC+CGG | - | chr7_2:62845816-62845835 | None:intergenic | 35.0% | |
| ! | TTACACTTGAGTGCTATTGT+TGG | - | chr7_2:62845891-62845910 | None:intergenic | 35.0% |
| ACAATAGCACTCAAGTGTAA+AGG | + | chr7_2:62845891-62845910 | Msa1067900:CDS | 35.0% | |
| CCGATAACATGTACATTTCA+TGG | + | chr7_2:62845928-62845947 | Msa1067900:CDS | 35.0% | |
| TGAATTCAATCTCGCTTCAA+CGG | + | chr7_2:62845995-62846014 | Msa1067900:CDS | 35.0% | |
| GTTAATGGAACGCTAAAGAA+TGG | + | chr7_2:62846044-62846063 | Msa1067900:CDS | 35.0% | |
| !! | AAGCACTTTTGATGATAGAC+CGG | + | chr7_2:62846067-62846086 | Msa1067900:CDS | 35.0% |
| ATAGACCGGTTACATTTAGA+GGG | + | chr7_2:62846081-62846100 | Msa1067900:CDS | 35.0% | |
| TGCAAATTACGGTATATTCG+GGG | - | chr7_2:62846140-62846159 | None:intergenic | 35.0% | |
| GTGCAAATTACGGTATATTC+GGG | - | chr7_2:62846141-62846160 | None:intergenic | 35.0% | |
| CGTGCAAATTACGGTATATT+CGG | - | chr7_2:62846142-62846161 | None:intergenic | 35.0% | |
| ! | GCTTTAGATCGTGCAAATTA+CGG | - | chr7_2:62846151-62846170 | None:intergenic | 35.0% |
| TATCACGAAAAACTGAACCA+GGG | - | chr7_2:62846202-62846221 | None:intergenic | 35.0% | |
| ! | TCCTTCAACAGAGTTTTCAA+GGG | - | chr7_2:62846243-62846262 | None:intergenic | 35.0% |
| ! | TTTTCTCTCTGCTTATGTTG+TGG | + | chr7_2:62846289-62846308 | Msa1067900:CDS | 35.0% |
| CTTCAGATAGAAGACGTTTA+TGG | - | chr7_2:62846669-62846688 | None:intergenic | 35.0% | |
| AAGTTCAACCATCAAATCCT+TGG | + | chr7_2:62846721-62846740 | Msa1067900:intron | 35.0% | |
| TTAGAGATCCAAGGATTTGA+TGG | - | chr7_2:62846732-62846751 | None:intergenic | 35.0% | |
| TTAACTATTGCCAAGTGATC+TGG | - | chr7_2:62846893-62846912 | None:intergenic | 35.0% | |
| CCAAAAAATCATGGCTCAAT+TGG | - | chr7_2:62846927-62846946 | None:intergenic | 35.0% | |
| !!! | CCAATTGAGCCATGATTTTT+TGG | + | chr7_2:62846924-62846943 | Msa1067900:intron | 35.0% |
| !!! | GTTAGCTTTTGGAGTTGAAT+TGG | - | chr7_2:62847009-62847028 | None:intergenic | 35.0% |
| CACTGCAGATAAAACAGAAA+AGG | - | chr7_2:62847170-62847189 | None:intergenic | 35.0% | |
| ! | GAAATGAGGATAGTGTTTTG+CGG | + | chr7_2:62847398-62847417 | Msa1067900:CDS | 35.0% |
| GGTGTAAAGCTCAAGATAAT+TGG | + | chr7_2:62847434-62847453 | Msa1067900:CDS | 35.0% | |
| !! | TTTCTGCTTTTAACCAGCTT+AGG | + | chr7_2:62847591-62847610 | Msa1067900:intron | 35.0% |
| TAGTTGTCTTCATCCATTGT+AGG | - | chr7_2:62847644-62847663 | None:intergenic | 35.0% | |
| TTGCATTCAATACAAAGCAG+TGG | + | chr7_2:62847704-62847723 | Msa1067900:CDS | 35.0% | |
| GTTATTAGCATACCTAGTGA+AGG | - | chr7_2:62848197-62848216 | None:intergenic | 35.0% | |
| CAAGAGAGACATTTATGATG+GGG | - | chr7_2:62848369-62848388 | None:intergenic | 35.0% | |
| CCAAGAGAGACATTTATGAT+GGG | - | chr7_2:62848370-62848389 | None:intergenic | 35.0% | |
| ACGAGTATAATGCCATGTTA+AGG | + | chr7_2:62848721-62848740 | Msa1067900:CDS | 35.0% | |
| CGAGTATAATGCCATGTTAA+GGG | + | chr7_2:62848722-62848741 | Msa1067900:CDS | 35.0% | |
| !!! | TGCTCTTTATTTTGGAAGAG+TGG | - | chr7_2:62848794-62848813 | None:intergenic | 35.0% |
| !!! | GCATCGTTTTAGCTTAACAA+TGG | + | chr7_2:62848877-62848896 | Msa1067900:three_prime_UTR | 35.0% |
| !!! | GGAATACTATGGTTTTGAAG+AGG | - | chr7_2:62848982-62849001 | None:intergenic | 35.0% |
| CTTTACACAAAATACAGCAC+TGG | - | chr7_2:62849183-62849202 | None:intergenic | 35.0% | |
| ! | CAGTGCTGTATTTTGTGTAA+AGG | + | chr7_2:62849181-62849200 | Msa1067900:three_prime_UTR | 35.0% |
| !!! | GGCACTAAATTTGTTTTTGC+AGG | + | chr7_2:62849209-62849228 | Msa1067900:three_prime_UTR | 35.0% |
| GCTGTATTTGTAGCTGGATT+TGG | - | chr7_2:62843633-62843652 | None:intergenic | 40.0% | |
| ! | CTTTTCCCTTCTTTCTCATC+TGG | + | chr7_2:62843888-62843907 | Msa1067900:five_prime_UTR | 40.0% |
| GTAATCAACACCAGTATCTG+TGG | - | chr7_2:62844055-62844074 | None:intergenic | 40.0% | |
| !! | TCAAATCCAGGAAGTGTTTC+TGG | - | chr7_2:62844093-62844112 | None:intergenic | 40.0% |
| !! | TAGGTGGTTTGTTAGTCGAT+TGG | + | chr7_2:62844248-62844267 | Msa1067900:CDS | 40.0% |
| ! | TTTTGCTACTAGACATTGGC+TGG | + | chr7_2:62844278-62844297 | Msa1067900:CDS | 40.0% |
| CATATAGAGATTCAGGGAGA+AGG | - | chr7_2:62845041-62845060 | None:intergenic | 40.0% | |
| CAATATAGGCATGCTCATGT+AGG | + | chr7_2:62845326-62845345 | Msa1067900:intron | 40.0% | |
| ACCAAACGCAAAACTGAACT+TGG | + | chr7_2:62845450-62845469 | Msa1067900:CDS | 40.0% | |
| ! | ACCAAGTTCAGTTTTGCGTT+TGG | - | chr7_2:62845454-62845473 | None:intergenic | 40.0% |
| AAACGCAAAACTGAACTTGG+TGG | + | chr7_2:62845453-62845472 | Msa1067900:CDS | 40.0% | |
| GATCTGGTATAGCAACCTAA+TGG | - | chr7_2:62845640-62845659 | None:intergenic | 40.0% | |
| CTCCATGTCATTCAGAAATG+AGG | - | chr7_2:62845721-62845740 | None:intergenic | 40.0% | |
| TGTGCAAATCTACGTGATCT+CGG | + | chr7_2:62845771-62845790 | Msa1067900:CDS | 40.0% | |
| GATCTCGGTAACATAGTTTC+TGG | + | chr7_2:62845786-62845805 | Msa1067900:CDS | 40.0% | |
| TCTTGTCACAACTCAAGCAA+GGG | + | chr7_2:62845864-62845883 | Msa1067900:CDS | 40.0% | |
| TTCATAACCAACAGCAGTAG+CGG | - | chr7_2:62845979-62845998 | None:intergenic | 40.0% | |
| GATAGACCGGTTACATTTAG+AGG | + | chr7_2:62846080-62846099 | Msa1067900:CDS | 40.0% | |
| GTATCACGAAAAACTGAACC+AGG | - | chr7_2:62846203-62846222 | None:intergenic | 40.0% | |
| TCCCTTGAAAACTCTGTTGA+AGG | + | chr7_2:62846239-62846258 | Msa1067900:CDS | 40.0% | |
| ! | GTCCTTCAACAGAGTTTTCA+AGG | - | chr7_2:62846244-62846263 | None:intergenic | 40.0% |
| !!! | AAAGAGAGTATTTTGGGTCC+TGG | + | chr7_2:62846320-62846339 | Msa1067900:CDS | 40.0% |
| GATACAGAAAGATGCTTACC+AGG | - | chr7_2:62846341-62846360 | None:intergenic | 40.0% | |
| ! | CTTTTTCTTTGCAGTCCTCA+AGG | + | chr7_2:62846445-62846464 | Msa1067900:intron | 40.0% |
| CAACTCCAAAAGCTAACTAC+AGG | + | chr7_2:62847012-62847031 | Msa1067900:intron | 40.0% | |
| TCCAAAAGCTAACTACAGGA+GGG | + | chr7_2:62847016-62847035 | Msa1067900:intron | 40.0% | |
| ! | GGAGGGACAATTTTTCTATG+AGG | + | chr7_2:62847033-62847052 | Msa1067900:intron | 40.0% |
| GATCATAGATCCGACCAATA+TGG | + | chr7_2:62847063-62847082 | Msa1067900:intron | 40.0% | |
| TCAACAGTGTGCACAAAAAC+TGG | - | chr7_2:62847139-62847158 | None:intergenic | 40.0% | |
| TGCCTATGCTAATGCAATAC+AGG | - | chr7_2:62847216-62847235 | None:intergenic | 40.0% | |
| GGTAAAGAAGCTCAGAAATG+AGG | + | chr7_2:62847384-62847403 | Msa1067900:CDS | 40.0% | |
| !! | AAAAAGGGAGCTTGTTGTGA+TGG | + | chr7_2:62847674-62847693 | Msa1067900:CDS | 40.0% |
| !! | AAAAGGGAGCTTGTTGTGAT+GGG | + | chr7_2:62847675-62847694 | Msa1067900:CDS | 40.0% |
| TAGTGACAGCTTTACCTTGT+TGG | - | chr7_2:62847801-62847820 | None:intergenic | 40.0% | |
| TTACTAATGTCAGTCACACG+TGG | + | chr7_2:62847849-62847868 | Msa1067900:intron | 40.0% | |
| GAATCATTCGTAGATCCAAG+CGG | - | chr7_2:62848059-62848078 | None:intergenic | 40.0% | |
| ATTCTTGAGGTTGACATGGT+GGG | - | chr7_2:62848139-62848158 | None:intergenic | 40.0% | |
| ATTAGCATACCTAGTGAAGG+TGG | - | chr7_2:62848194-62848213 | None:intergenic | 40.0% | |
| CCCATCATAAATGTCTCTCT+TGG | + | chr7_2:62848367-62848386 | Msa1067900:intron | 40.0% | |
| GCCAAGAGAGACATTTATGA+TGG | - | chr7_2:62848371-62848390 | None:intergenic | 40.0% | |
| ! | TGGTGTTTTGCTACCTTCAA+TGG | + | chr7_2:62848610-62848629 | Msa1067900:intron | 40.0% |
| TATGATGCAGAATGCAAGAG+TGG | + | chr7_2:62848651-62848670 | Msa1067900:intron | 40.0% | |
| !! | ATGCAAGAGTGGTTCTGAAA+TGG | + | chr7_2:62848662-62848681 | Msa1067900:CDS | 40.0% |
| TTTGGAAGAGTGGTTAGATG+AGG | - | chr7_2:62848784-62848803 | None:intergenic | 40.0% | |
| AGAGCAATGGAACTTAGCAT+AGG | + | chr7_2:62848808-62848827 | Msa1067900:exon | 40.0% | |
| TCTTTGCATCAACCGATCAT+CGG | + | chr7_2:62848833-62848852 | Msa1067900:three_prime_UTR | 40.0% | |
| TTGATTGAAACCTGACCAAG+AGG | + | chr7_2:62848910-62848929 | Msa1067900:three_prime_UTR | 40.0% | |
| ATCATTAACTCCTCTTGGTC+AGG | - | chr7_2:62848923-62848942 | None:intergenic | 40.0% | |
| TTCGACTAGGAGGAATACTA+TGG | - | chr7_2:62848993-62849012 | None:intergenic | 40.0% | |
| CAATGCAGGAATATTCGACT+AGG | - | chr7_2:62849006-62849025 | None:intergenic | 40.0% | |
| !! | TACAGCACTGGCTATATACA+AGG | - | chr7_2:62849171-62849190 | None:intergenic | 40.0% |
| !! | GGTGTTGCTGTATTTGTAGC+TGG | - | chr7_2:62843639-62843658 | None:intergenic | 45.0% |
| ! | AGCGATGAAGTAGTTGGTGT+TGG | - | chr7_2:62843689-62843708 | None:intergenic | 45.0% |
| ACCCTTTGTGCTTGTTTACC+AGG | + | chr7_2:62843970-62843989 | Msa1067900:CDS | 45.0% | |
| CCCTGGTAAACAAGCACAAA+GGG | - | chr7_2:62843974-62843993 | None:intergenic | 45.0% | |
| CCCTTTGTGCTTGTTTACCA+GGG | + | chr7_2:62843971-62843990 | Msa1067900:CDS | 45.0% | |
| ACAACATCAAGAACATGCCC+TGG | - | chr7_2:62843991-62844010 | None:intergenic | 45.0% | |
| ACAGTCACAAGCTGTGTTCT+TGG | + | chr7_2:62844131-62844150 | Msa1067900:CDS | 45.0% | |
| CACTAGTCATGCTTCTCTCT+TGG | + | chr7_2:62844160-62844179 | Msa1067900:CDS | 45.0% | |
| AGGTTTATGAGCCTTGGTGA+TGG | + | chr7_2:62844204-62844223 | Msa1067900:CDS | 45.0% | |
| GTGGCGTGTGGTTTAAACTT+AGG | + | chr7_2:62844229-62844248 | Msa1067900:CDS | 45.0% | |
| GCGTGTGGTTTAAACTTAGG+TGG | + | chr7_2:62844232-62844251 | Msa1067900:CDS | 45.0% | |
| GAGCTTTCTCCATAGCAAGT+TGG | + | chr7_2:62845475-62845494 | Msa1067900:CDS | 45.0% | |
| TGAGTCTTCGATACCTTGTC+AGG | + | chr7_2:62845525-62845544 | Msa1067900:intron | 45.0% | |
| CTCTTGTCACAACTCAAGCA+AGG | + | chr7_2:62845863-62845882 | Msa1067900:CDS | 45.0% | |
| TCATAACCAACAGCAGTAGC+GGG | - | chr7_2:62845978-62845997 | None:intergenic | 45.0% | |
| TGCCTCCCTCTAAATGTAAC+CGG | - | chr7_2:62846089-62846108 | None:intergenic | 45.0% | |
| GGGAGGAACTCGTGAAATAA+AGG | - | chr7_2:62846182-62846201 | None:intergenic | 45.0% | |
| TTATTTCACGAGTTCCTCCC+TGG | + | chr7_2:62846182-62846201 | Msa1067900:CDS | 45.0% | |
| TCTCTCTGCTTATGTTGTGG+AGG | + | chr7_2:62846292-62846311 | Msa1067900:CDS | 45.0% | |
| ! | GTGTCGACATTTCAGTGTCA+TGG | - | chr7_2:62846609-62846628 | None:intergenic | 45.0% |
| TGGAAGGTCTTAGAGATCCA+AGG | - | chr7_2:62846741-62846760 | None:intergenic | 45.0% | |
| CTCCAAAAGCTAACTACAGG+AGG | + | chr7_2:62847015-62847034 | Msa1067900:intron | 45.0% | |
| !!! | TCCCTCCTGTAGTTAGCTTT+TGG | - | chr7_2:62847020-62847039 | None:intergenic | 45.0% |
| TAATGCAATACAGGCCACCA+AGG | - | chr7_2:62847207-62847226 | None:intergenic | 45.0% | |
| GGCCTGTATTGCATTAGCAT+AGG | + | chr7_2:62847211-62847230 | Msa1067900:CDS | 45.0% | |
| TACCTATGGCGTTCCTACAA+TGG | + | chr7_2:62847628-62847647 | Msa1067900:CDS | 45.0% | |
| ATCCATTGTAGGAACGCCAT+AGG | - | chr7_2:62847633-62847652 | None:intergenic | 45.0% | |
| GTGGATCATCACATAAGCGA+AGG | + | chr7_2:62847723-62847742 | Msa1067900:CDS | 45.0% | |
| ACCTTGTTGGCAGGTAAACT+CGG | - | chr7_2:62847788-62847807 | None:intergenic | 45.0% | |
| TCATTGATCAGCAAACCGCT+TGG | + | chr7_2:62848041-62848060 | Msa1067900:CDS | 45.0% | |
| GATTCTTGAGGTTGACATGG+TGG | - | chr7_2:62848140-62848159 | None:intergenic | 45.0% | |
| GACGATTCTTGAGGTTGACA+TGG | - | chr7_2:62848143-62848162 | None:intergenic | 45.0% | |
| ! | CATTTATGATGGGGAGACAG+TGG | - | chr7_2:62848360-62848379 | None:intergenic | 45.0% |
| AGTGGTTAGATGAGGAGGAT+TGG | - | chr7_2:62848776-62848795 | None:intergenic | 45.0% | |
| TCATGGAATGGTCCGATGAT+CGG | - | chr7_2:62848848-62848867 | None:intergenic | 45.0% | |
| TGCAGGAATATTCGACTAGG+AGG | - | chr7_2:62849003-62849022 | None:intergenic | 45.0% | |
| TACACTGCAGCTTTCAATGC+AGG | - | chr7_2:62849020-62849039 | None:intergenic | 45.0% | |
| GCATTGAAAGCTGCAGTGTA+TGG | + | chr7_2:62849020-62849039 | Msa1067900:three_prime_UTR | 45.0% | |
| GGGACCCAGATGAGAAAGAA+GGG | - | chr7_2:62843896-62843915 | None:intergenic | 50.0% | |
| AGGGACCCAGATGAGAAAGA+AGG | - | chr7_2:62843897-62843916 | None:intergenic | 50.0% | |
| !! | AGCACAAAGGGTGCCATTGT+AGG | - | chr7_2:62843962-62843981 | None:intergenic | 50.0% |
| GCCCTGGTAAACAAGCACAA+AGG | - | chr7_2:62843975-62843994 | None:intergenic | 50.0% | |
| AAGCTGCCAGAAACACTTCC+TGG | + | chr7_2:62844084-62844103 | Msa1067900:CDS | 50.0% | |
| GTCACAAGCTGTGTTCTTGG+AGG | + | chr7_2:62844134-62844153 | Msa1067900:CDS | 50.0% | |
| ! | CAGCAGTAGCGGGACTATTT+GGG | - | chr7_2:62845968-62845987 | None:intergenic | 50.0% |
| ! | ACAGCAGTAGCGGGACTATT+TGG | - | chr7_2:62845969-62845988 | None:intergenic | 50.0% |
| AATAGTCCCGCTACTGCTGT+TGG | + | chr7_2:62845969-62845988 | Msa1067900:CDS | 50.0% | |
| GACCGGTTACATTTAGAGGG+AGG | + | chr7_2:62846084-62846103 | Msa1067900:CDS | 50.0% | |
| CACGAAAAACTGAACCAGGG+AGG | - | chr7_2:62846199-62846218 | None:intergenic | 50.0% | |
| TGGCAGTGTCAGTGCTTCAT+AGG | - | chr7_2:62846589-62846608 | None:intergenic | 50.0% | |
| ATCTGCAGTGAGCTTCCTTG+CGG | + | chr7_2:62847180-62847199 | Msa1067900:intron | 50.0% | |
| ACCGAGTTTACCTGCCAACA+AGG | + | chr7_2:62847784-62847803 | Msa1067900:CDS | 50.0% | |
| GACAGCTTTACCTTGTTGGC+AGG | - | chr7_2:62847797-62847816 | None:intergenic | 50.0% | |
| !! | GCGGTTTGCTGATCAATGAC+TGG | - | chr7_2:62848040-62848059 | None:intergenic | 50.0% |
| ACGGCAAAGCAGCATAGTGT+TGG | + | chr7_2:62848098-62848117 | Msa1067900:CDS | 50.0% | |
| ATTCCTCCTCCACCTTCACT+AGG | + | chr7_2:62848182-62848201 | Msa1067900:CDS | 50.0% | |
| ATACCTAGTGAAGGTGGAGG+AGG | - | chr7_2:62848188-62848207 | None:intergenic | 50.0% | |
| AGCATACCTAGTGAAGGTGG+AGG | - | chr7_2:62848191-62848210 | None:intergenic | 50.0% | |
| GGAAGAGTGGTTAGATGAGG+AGG | - | chr7_2:62848781-62848800 | None:intergenic | 50.0% | |
| !! | ATGAGCCTTGGTGATGGTCG+TGG | + | chr7_2:62844210-62844229 | Msa1067900:CDS | 55.0% |
| ACACGCCACGACCATCACCA+AGG | - | chr7_2:62844218-62844237 | None:intergenic | 60.0% | |
| !! | TTGGTGATGGTCGTGGCGTG+TGG | + | chr7_2:62844217-62844236 | Msa1067900:CDS | 60.0% |
| GTGAGCTTCCTTGCGGACCT+TGG | + | chr7_2:62847187-62847206 | Msa1067900:intron | 60.0% | |
| AGCTTCCTTGCGGACCTTGG+TGG | + | chr7_2:62847190-62847209 | Msa1067900:CDS | 60.0% | |
| ACAGGCCACCAAGGTCCGCA+AGG | - | chr7_2:62847198-62847217 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 62843594 | 62849336 | 62843594 | ID=Msa1067900;Name=Msa1067900 |
| chr7_2 | mRNA | 62843594 | 62849336 | 62843594 | ID=Msa1067900-mRNA-1;Parent=Msa1067900;Name=Msa1067900-mRNA-1;_AED=0.08;_eAED=0.08;_QI=340|0.85|0.87|1|1|1|8|512|622 |
| chr7_2 | exon | 62843594 | 62844299 | 62843594 | ID=Msa1067900-mRNA-1:exon:12785;Parent=Msa1067900-mRNA-1 |
| chr7_2 | exon | 62845432 | 62845523 | 62845432 | ID=Msa1067900-mRNA-1:exon:12786;Parent=Msa1067900-mRNA-1 |
| chr7_2 | exon | 62845644 | 62846368 | 62845644 | ID=Msa1067900-mRNA-1:exon:12787;Parent=Msa1067900-mRNA-1 |
| chr7_2 | exon | 62847188 | 62847258 | 62847188 | ID=Msa1067900-mRNA-1:exon:12788;Parent=Msa1067900-mRNA-1 |
| chr7_2 | exon | 62847373 | 62847462 | 62847373 | ID=Msa1067900-mRNA-1:exon:12789;Parent=Msa1067900-mRNA-1 |
| chr7_2 | exon | 62847608 | 62847805 | 62847608 | ID=Msa1067900-mRNA-1:exon:12790;Parent=Msa1067900-mRNA-1 |
| chr7_2 | exon | 62848041 | 62848203 | 62848041 | ID=Msa1067900-mRNA-1:exon:12791;Parent=Msa1067900-mRNA-1 |
| chr7_2 | exon | 62848661 | 62849336 | 62848661 | ID=Msa1067900-mRNA-1:exon:12792;Parent=Msa1067900-mRNA-1 |
| chr7_2 | five_prime_UTR | 62843594 | 62843933 | 62843594 | ID=Msa1067900-mRNA-1:five_prime_utr;Parent=Msa1067900-mRNA-1 |
| chr7_2 | CDS | 62843934 | 62844299 | 62843934 | ID=Msa1067900-mRNA-1:cds;Parent=Msa1067900-mRNA-1 |
| chr7_2 | CDS | 62845432 | 62845523 | 62845432 | ID=Msa1067900-mRNA-1:cds;Parent=Msa1067900-mRNA-1 |
| chr7_2 | CDS | 62845644 | 62846368 | 62845644 | ID=Msa1067900-mRNA-1:cds;Parent=Msa1067900-mRNA-1 |
| chr7_2 | CDS | 62847188 | 62847258 | 62847188 | ID=Msa1067900-mRNA-1:cds;Parent=Msa1067900-mRNA-1 |
| chr7_2 | CDS | 62847373 | 62847462 | 62847373 | ID=Msa1067900-mRNA-1:cds;Parent=Msa1067900-mRNA-1 |
| chr7_2 | CDS | 62847608 | 62847805 | 62847608 | ID=Msa1067900-mRNA-1:cds;Parent=Msa1067900-mRNA-1 |
| chr7_2 | CDS | 62848041 | 62848203 | 62848041 | ID=Msa1067900-mRNA-1:cds;Parent=Msa1067900-mRNA-1 |
| chr7_2 | CDS | 62848661 | 62848824 | 62848661 | ID=Msa1067900-mRNA-1:cds;Parent=Msa1067900-mRNA-1 |
| chr7_2 | three_prime_UTR | 62848825 | 62849336 | 62848825 | ID=Msa1067900-mRNA-1:three_prime_utr;Parent=Msa1067900-mRNA-1 |
| Gene Sequence |
| Protein sequence |
