Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1395590 | XP_003624126.1 | 95.498 | 622 | 19 | 1 | 1 | 622 | 1 | 613 | 0.0 | 1226 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1395590 | G7KQL6 | 95.498 | 622 | 19 | 1 | 1 | 622 | 1 | 613 | 0.0 | 1226 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1350520 | Msa1395590 | 0.812058 | 5.132739e-51 | -8.615850e-47 |
| Msa0813320 | Msa1395590 | 0.806430 | 8.256709e-50 | -8.615850e-47 |
| Msa1018020 | Msa1395590 | 0.802657 | 5.056224e-49 | -8.615850e-47 |
| Msa1028770 | Msa1395590 | 0.807488 | 4.932097e-50 | -8.615850e-47 |
| Msa1067900 | Msa1395590 | 0.980326 | 5.819551e-150 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1395590 | MtrunA17_Chr7g0249061 | 95.498 | 622 | 19 | 1 | 1 | 622 | 1 | 613 | 0.0 | 1226 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1395590 | AT5G16520.1 | 56.149 | 618 | 234 | 8 | 1 | 608 | 1 | 591 | 0.0 | 709 |
| Msa1395590 | AT5G16520.2 | 65.479 | 449 | 145 | 2 | 1 | 448 | 1 | 440 | 0.0 | 640 |
Find 145 sgRNAs with CRISPR-Local
Find 289 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTTCCATTGCTCTTTATTT+TGG | 0.166778 | tig0021957:+10711 | None:intergenic |
| ACAGCAGTAGCGGGACTATT+TGG | 0.178995 | tig0021957:+13543 | None:intergenic |
| CAACTATGATGAATCTAAAA+AGG | 0.223608 | tig0021957:-11852 | Msa1395590:CDS |
| GGTTGATAAAGAGAGTATTT+TGG | 0.245485 | tig0021957:-13196 | Msa1395590:CDS |
| TCAAATCCAGGAAGTGTTTC+TGG | 0.259839 | tig0021957:+15419 | None:intergenic |
| TTCAGAAATGAGGTTAATTC+TGG | 0.294018 | tig0021957:+13801 | None:intergenic |
| GGTGTAAAGCTCAAGATAAT+TGG | 0.296124 | tig0021957:-12076 | Msa1395590:CDS |
| AACGATGCTTGTAAAATTCA+TGG | 0.301107 | tig0021957:+10648 | None:intergenic |
| ACAGTCACAAGCTGTGTTCT+TGG | 0.320746 | tig0021957:-15378 | Msa1395590:CDS |
| CGTGCAAATTACGGTATATT+CGG | 0.323620 | tig0021957:+13370 | None:intergenic |
| ACCCTTTGTGCTTGTTTACC+AGG | 0.324368 | tig0021957:-15539 | Msa1395590:CDS |
| CCGATAACATGTACATTTCA+TGG | 0.352143 | tig0021957:-13581 | Msa1395590:CDS |
| CCATGAAATGTACATGTTAT+CGG | 0.354805 | tig0021957:+13581 | None:intergenic |
| CAGCAGTAGCGGGACTATTT+GGG | 0.356389 | tig0021957:+13544 | None:intergenic |
| GATAGACCGGTTACATTTAG+AGG | 0.357652 | tig0021957:-13429 | Msa1395590:CDS |
| GATCTCGGTAACATAGTTTC+TGG | 0.357971 | tig0021957:-13723 | Msa1395590:CDS |
| GCTGTATTTGTAGCTGGATT+TGG | 0.358128 | tig0021957:+15879 | None:intergenic |
| AAGCTGCCAGAAACACTTCC+TGG | 0.362286 | tig0021957:-15425 | Msa1395590:CDS |
| TTTGAACATGAATGATGAAA+TGG | 0.364195 | tig0021957:+15671 | None:intergenic |
| TCAAATATTACCACAGATAC+TGG | 0.368279 | tig0021957:-15467 | Msa1395590:CDS |
| TACAATTCTAGTGTGAATAC+AGG | 0.376315 | tig0021957:-12148 | Msa1395590:intron |
| CACTAGTCATGCTTCTCTCT+TGG | 0.381743 | tig0021957:-15349 | Msa1395590:CDS |
| ATCATTAACTCCTCTTGGTC+AGG | 0.389022 | tig0021957:+10590 | None:intergenic |
| TTTCTTAGGTTTATGAGCCT+TGG | 0.397810 | tig0021957:-15311 | Msa1395590:CDS |
| TAACATAGTTTCTGGAAATC+CGG | 0.398968 | tig0021957:-13715 | Msa1395590:CDS |
| TAGTGACAGCTTTACCTTGT+TGG | 0.404150 | tig0021957:+11712 | None:intergenic |
| GGGAGGAACTCGTGAAATAA+AGG | 0.407533 | tig0021957:+13330 | None:intergenic |
| AGTGGTTAGATGAGGAGGAT+TGG | 0.407558 | tig0021957:+10737 | None:intergenic |
| GCTTTAGATCGTGCAAATTA+CGG | 0.408917 | tig0021957:+13361 | None:intergenic |
| TTACAATCATTAACTCCTCT+TGG | 0.410640 | tig0021957:+10585 | None:intergenic |
| GGAAGAGTGGTTAGATGAGG+AGG | 0.418861 | tig0021957:+10732 | None:intergenic |
| CAATAATCATCAAAGAATAT+CGG | 0.420117 | tig0021957:+10435 | None:intergenic |
| TCCCTTGAAAACTCTGTTGA+AGG | 0.423088 | tig0021957:-13270 | Msa1395590:CDS |
| TTCGACTAGGAGGAATACTA+TGG | 0.425566 | tig0021957:+10520 | None:intergenic |
| ATGCAAGAGTGGTTCTGAAA+TGG | 0.427673 | tig0021957:-10848 | Msa1395590:CDS |
| TTGATCTCTTTGATATGATC+TGG | 0.431060 | tig0021957:+13856 | None:intergenic |
| ACGAGTATAATGCCATGTTA+AGG | 0.432576 | tig0021957:-10789 | Msa1395590:CDS |
| GGTGTTGCTGTATTTGTAGC+TGG | 0.435290 | tig0021957:+15873 | None:intergenic |
| TAGTTGTCTTCATCCATTGT+AGG | 0.445858 | tig0021957:+11869 | None:intergenic |
| GTGCAAATTACGGTATATTC+GGG | 0.445963 | tig0021957:+13371 | None:intergenic |
| GTGAGCTTCCTTGCGGACCT+TGG | 0.448940 | tig0021957:-12323 | Msa1395590:CDS |
| CGAGTATAATGCCATGTTAA+GGG | 0.449482 | tig0021957:-10788 | Msa1395590:CDS |
| ATGATTGTAAAATCTTTAAG+TGG | 0.449559 | tig0021957:-10572 | Msa1395590:three_prime_UTR |
| TGCCTCCCTCTAAATGTAAC+CGG | 0.450494 | tig0021957:+13423 | None:intergenic |
| GTTAATGGAACGCTAAAGAA+TGG | 0.451557 | tig0021957:-13465 | Msa1395590:CDS |
| GTGGCGTGTGGTTTAAACTT+AGG | 0.451946 | tig0021957:-15280 | Msa1395590:CDS |
| AAAAGATTCTAACTTGATGA+TGG | 0.452592 | tig0021957:+15639 | None:intergenic |
| TGCCTATGCTAATGCAATAC+AGG | 0.453032 | tig0021957:+12297 | None:intergenic |
| TACACTGCATTATGAAAATA+CGG | 0.455311 | tig0021957:-11431 | Msa1395590:CDS |
| TTACACTTGAGTGCTATTGT+TGG | 0.458629 | tig0021957:+13621 | None:intergenic |
| GTGTAAAGCTCAAGATAATT+GGG | 0.460038 | tig0021957:-12075 | Msa1395590:CDS |
| CCCTGGTAAACAAGCACAAA+GGG | 0.473078 | tig0021957:+15538 | None:intergenic |
| GAAAAGTATCCAACTTGCTA+TGG | 0.476797 | tig0021957:+14025 | None:intergenic |
| GACAGCTTTACCTTGTTGGC+AGG | 0.480270 | tig0021957:+11716 | None:intergenic |
| TAGGTGGTTTGTTAGTCGAT+TGG | 0.488159 | tig0021957:-15261 | Msa1395590:CDS |
| GCATTGAAAGCTGCAGTGTA+TGG | 0.489249 | tig0021957:-10490 | Msa1395590:three_prime_UTR |
| ATTCCTCCTCCACCTTCACT+AGG | 0.491397 | tig0021957:-11328 | Msa1395590:intron |
| TTATTTCACGAGTTCCTCCC+TGG | 0.493003 | tig0021957:-13327 | Msa1395590:CDS |
| TTTCTTAGCGATGAAGTAGT+TGG | 0.496770 | tig0021957:+15817 | None:intergenic |
| TTGAACATGAATGATGAAAT+GGG | 0.498482 | tig0021957:+15672 | None:intergenic |
| ACCAAACGCAAAACTGAACT+TGG | 0.498483 | tig0021957:-14059 | Msa1395590:CDS |
| CCCTTTGTGCTTGTTTACCA+GGG | 0.501452 | tig0021957:-15538 | Msa1395590:CDS |
| ACCTTGTTGGCAGGTAAACT+CGG | 0.504168 | tig0021957:+11725 | None:intergenic |
| TTTGGAAGAGTGGTTAGATG+AGG | 0.506773 | tig0021957:+10729 | None:intergenic |
| AACATAGTTTCTGGAAATCC+GGG | 0.507772 | tig0021957:-13714 | Msa1395590:CDS |
| AGCACAAAGGGTGCCATTGT+AGG | 0.508507 | tig0021957:+15550 | None:intergenic |
| TTGTAGGTGATTGAATTTGA+AGG | 0.508622 | tig0021957:+15566 | None:intergenic |
| AGGGACCCAGATGAGAAAGA+AGG | 0.508864 | tig0021957:+15615 | None:intergenic |
| AGCTTCCTTGCGGACCTTGG+TGG | 0.509357 | tig0021957:-12320 | Msa1395590:CDS |
| TACACTGCAGCTTTCAATGC+AGG | 0.515171 | tig0021957:+10493 | None:intergenic |
| TTCTTAAGAGAATCAAATCC+AGG | 0.515515 | tig0021957:+15407 | None:intergenic |
| AAAAGGGAGCTTGTTGTGAT+GGG | 0.519618 | tig0021957:-11835 | Msa1395590:CDS |
| ATGAGCCTTGGTGATGGTCG+TGG | 0.521704 | tig0021957:-15299 | Msa1395590:CDS |
| TGATTGTAAAATCTTTAAGT+GGG | 0.523923 | tig0021957:-10571 | Msa1395590:three_prime_UTR |
| CTCCATGTCATTCAGAAATG+AGG | 0.532193 | tig0021957:+13791 | None:intergenic |
| AGCGATGAAGTAGTTGGTGT+TGG | 0.533554 | tig0021957:+15823 | None:intergenic |
| AGGTTTATGAGCCTTGGTGA+TGG | 0.533683 | tig0021957:-15305 | Msa1395590:CDS |
| GTCACAAGCTGTGTTCTTGG+AGG | 0.541898 | tig0021957:-15375 | Msa1395590:CDS |
| TGTGCAAATCTACGTGATCT+CGG | 0.542442 | tig0021957:-13738 | Msa1395590:CDS |
| TCTCTCTGCTTATGTTGTGG+AGG | 0.543333 | tig0021957:-13217 | Msa1395590:CDS |
| AAATATGTAAAGTTTACCTA+TGG | 0.546166 | tig0021957:-11896 | Msa1395590:CDS |
| ACTCTTTCGTCAATAAATCC+CGG | 0.547073 | tig0021957:+13696 | None:intergenic |
| GCGTGTGGTTTAAACTTAGG+TGG | 0.547335 | tig0021957:-15277 | Msa1395590:CDS |
| TGAATTCAATCTCGCTTCAA+CGG | 0.549157 | tig0021957:-13514 | Msa1395590:CDS |
| TCATGGAATGGTCCGATGAT+CGG | 0.549630 | tig0021957:+10665 | None:intergenic |
| CATATCAAAGAGATCAATTG+AGG | 0.551013 | tig0021957:-13850 | Msa1395590:CDS |
| ATACCTAGTGAAGGTGGAGG+AGG | 0.553881 | tig0021957:+11325 | None:intergenic |
| CAATGCAGGAATATTCGACT+AGG | 0.554812 | tig0021957:+10507 | None:intergenic |
| GGGACCCAGATGAGAAAGAA+GGG | 0.555871 | tig0021957:+15616 | None:intergenic |
| TGCTTGTAAAATTCATGGAA+TGG | 0.555989 | tig0021957:+10653 | None:intergenic |
| TACCTATGGCGTTCCTACAA+TGG | 0.557289 | tig0021957:-11882 | Msa1395590:CDS |
| ACAATAGCACTCAAGTGTAA+AGG | 0.559783 | tig0021957:-13618 | Msa1395590:CDS |
| ATTCTTGAGGTTGACATGGT+GGG | 0.562440 | tig0021957:+11374 | None:intergenic |
| AAACGCAAAACTGAACTTGG+TGG | 0.565313 | tig0021957:-14056 | Msa1395590:CDS |
| AATAGTCCCGCTACTGCTGT+TGG | 0.568021 | tig0021957:-13540 | Msa1395590:CDS |
| TCATTGATCAGCAAACCGCT+TGG | 0.568543 | tig0021957:-11469 | Msa1395590:CDS |
| CTTTACACAAAATACAGCAC+TGG | 0.568765 | tig0021957:+10330 | None:intergenic |
| GGTAAAGAAGCTCAGAAATG+AGG | 0.569348 | tig0021957:-12126 | Msa1395590:CDS |
| TACAGCACTGGCTATATACA+AGG | 0.570684 | tig0021957:+10342 | None:intergenic |
| GAGCTTTCTCCATAGCAAGT+TGG | 0.572720 | tig0021957:-14034 | Msa1395590:CDS |
| TTTGAGATTCTTCTGAACAT+CGG | 0.574533 | tig0021957:+10819 | None:intergenic |
| TCATAACCAACAGCAGTAGC+GGG | 0.574581 | tig0021957:+13534 | None:intergenic |
| CTCTTGTCACAACTCAAGCA+AGG | 0.574712 | tig0021957:-13646 | Msa1395590:CDS |
| TAATAATCTTTCCCTTAACA+TGG | 0.579247 | tig0021957:+10777 | None:intergenic |
| ATCTGCAGTGAGCTTCCTTG+CGG | 0.582306 | tig0021957:-12330 | Msa1395590:intron |
| ACAATTCTAGTGTGAATACA+GGG | 0.582648 | tig0021957:-12147 | Msa1395590:intron |
| TTCATAACCAACAGCAGTAG+CGG | 0.582794 | tig0021957:+13533 | None:intergenic |
| TCAAATTCAATCACCTACAA+TGG | 0.585924 | tig0021957:-15563 | Msa1395590:CDS |
| ATCCATTGTAGGAACGCCAT+AGG | 0.586263 | tig0021957:+11880 | None:intergenic |
| GATACAGAAAGATGCTTACC+AGG | 0.587041 | tig0021957:+13171 | None:intergenic |
| TCTTTGCATCAACCGATCAT+CGG | 0.588945 | tig0021957:-10677 | Msa1395590:three_prime_UTR |
| GTTATTAGCATACCTAGTGA+AGG | 0.591508 | tig0021957:+11316 | None:intergenic |
| ACCGAGTTTACCTGCCAACA+AGG | 0.597089 | tig0021957:-11726 | Msa1395590:intron |
| TCTTCCAAAATAAAGAGCAA+TGG | 0.597808 | tig0021957:-10715 | Msa1395590:CDS |
| ACGGCAAAGCAGCATAGTGT+TGG | 0.602435 | tig0021957:-11412 | Msa1395590:CDS |
| ATAGACCGGTTACATTTAGA+GGG | 0.604172 | tig0021957:-13428 | Msa1395590:CDS |
| ACAGGCCACCAAGGTCCGCA+AGG | 0.605220 | tig0021957:+12315 | None:intergenic |
| TGCAGGAATATTCGACTAGG+AGG | 0.606318 | tig0021957:+10510 | None:intergenic |
| TTGGTGATGGTCGTGGCGTG+TGG | 0.607994 | tig0021957:-15292 | Msa1395590:CDS |
| TTGATTGAAACCTGACCAAG+AGG | 0.608005 | tig0021957:-10600 | Msa1395590:three_prime_UTR |
| GATTCTTGAGGTTGACATGG+TGG | 0.608815 | tig0021957:+11373 | None:intergenic |
| ATTGAAAAGAAAATCTGAGA+GGG | 0.611668 | tig0021957:+15596 | None:intergenic |
| ACAACATCAAGAACATGCCC+TGG | 0.615401 | tig0021957:+15521 | None:intergenic |
| TCAATAATAGACGATTCTTG+AGG | 0.615422 | tig0021957:+11361 | None:intergenic |
| TATGATGCAGAATGCAAGAG+TGG | 0.623409 | tig0021957:-10859 | Msa1395590:intron |
| AGCATACCTAGTGAAGGTGG+AGG | 0.623423 | tig0021957:+11322 | None:intergenic |
| ATTAGCATACCTAGTGAAGG+TGG | 0.626551 | tig0021957:+11319 | None:intergenic |
| AGAGCAATGGAACTTAGCAT+AGG | 0.627361 | tig0021957:-10702 | Msa1395590:exon |
| GTGGATCATCACATAAGCGA+AGG | 0.627497 | tig0021957:-11787 | Msa1395590:CDS |
| TATCGGATGAAATCAAAATG+TGG | 0.630322 | tig0021957:+10452 | None:intergenic |
| TTGCATTCAATACAAAGCAG+TGG | 0.632289 | tig0021957:-11806 | Msa1395590:CDS |
| GACCGGTTACATTTAGAGGG+AGG | 0.633609 | tig0021957:-13425 | Msa1395590:CDS |
| GTAATCAACACCAGTATCTG+TGG | 0.633899 | tig0021957:+15457 | None:intergenic |
| AACCTCATTTCTGAATGACA+TGG | 0.633930 | tig0021957:-13793 | Msa1395590:CDS |
| GACGATTCTTGAGGTTGACA+TGG | 0.635902 | tig0021957:+11370 | None:intergenic |
| GCCCTGGTAAACAAGCACAA+AGG | 0.639289 | tig0021957:+15537 | None:intergenic |
| TCTTGTCACAACTCAAGCAA+GGG | 0.641712 | tig0021957:-13645 | Msa1395590:CDS |
| GGCCTGTATTGCATTAGCAT+AGG | 0.643277 | tig0021957:-12299 | Msa1395590:CDS |
| TGACGAAACATATATGAACA+TGG | 0.657800 | tig0021957:+10367 | None:intergenic |
| GAGAAAATTGATATACAATG+TGG | 0.658958 | tig0021957:+13236 | None:intergenic |
| TAATGCAATACAGGCCACCA+AGG | 0.675200 | tig0021957:+12306 | None:intergenic |
| ACACGCCACGACCATCACCA+AGG | 0.682883 | tig0021957:+15294 | None:intergenic |
| GAATCATTCGTAGATCCAAG+CGG | 0.684534 | tig0021957:+11454 | None:intergenic |
| CATTGAAAAGAAAATCTGAG+AGG | 0.697366 | tig0021957:+15595 | None:intergenic |
| TGCAAATTACGGTATATTCG+GGG | 0.713711 | tig0021957:+13372 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTAATGATTATTTTTGT+GGG | + | tig0021957:10326-10345 | None:intergenic | 10.0% |
| !!! | TTATTTAATGATTATTTTTG+TGG | + | tig0021957:10327-10346 | None:intergenic | 10.0% |
| !! | ATTGACTAAATATAAAATAT+GGG | + | tig0021957:13011-13030 | None:intergenic | 10.0% |
| !! | AATTGACTAAATATAAAATA+TGG | + | tig0021957:13012-13031 | None:intergenic | 10.0% |
| !! | CTAATAAAAATATGATAAAA+TGG | + | tig0021957:13127-13146 | None:intergenic | 10.0% |
| !!! | AAATTAATTTTAAAAAGATG+CGG | + | tig0021957:14606-14625 | None:intergenic | 10.0% |
| !!! | GTTTGATTAGTTAAATTAAT+TGG | - | tig0021957:10962-10981 | Msa1395590:intron | 15.0% |
| !! | TGTTTATAAGTTAAATTAGT+TGG | - | tig0021957:11044-11063 | Msa1395590:intron | 15.0% |
| !! | TAACTAAATTATATACACTT+TGG | + | tig0021957:11240-11259 | None:intergenic | 15.0% |
| !!! | TAAAGTAGTTTAATTTGTTA+TGG | - | tig0021957:11828-11847 | Msa1395590:CDS | 15.0% |
| !! | TTGAAATAGAATTACAATAT+AGG | - | tig0021957:11914-11933 | Msa1395590:intron | 15.0% |
| !!! | CATTTTAGAAACAAATATAT+AGG | + | tig0021957:13367-13386 | None:intergenic | 15.0% |
| !!! | CTATATATTTGTTTCTAAAA+TGG | - | tig0021957:13365-13384 | Msa1395590:CDS | 15.0% |
| !! | TAAACATTTGTCATATATTA+AGG | - | tig0021957:13550-13569 | Msa1395590:CDS | 15.0% |
| !!! | ATTTTCTTATTGTCAATAAT+AGG | - | tig0021957:14111-14130 | Msa1395590:intron | 15.0% |
| !!! | AGTTTTTCTACTAAAATATA+TGG | - | tig0021957:14574-14593 | Msa1395590:intron | 15.0% |
| !! | TATTAAAACAAACAACTAAT+TGG | + | tig0021957:14826-14845 | None:intergenic | 15.0% |
| !! | ATCCATAAAAGAATAAAAAT+GGG | + | tig0021957:15880-15899 | None:intergenic | 15.0% |
| !! | AATCCATAAAAGAATAAAAA+TGG | + | tig0021957:15881-15900 | None:intergenic | 15.0% |
| !!! | AAAAGAATTGAATTTTGAGT+AGG | + | tig0021957:10262-10281 | None:intergenic | 20.0% |
| !! | AAAAACAACATTAATTGCTT+TGG | - | tig0021957:10352-10371 | Msa1395590:three_prime_UTR | 20.0% |
| !!! | TTTTGTTTTGCTTATTTCTT+AGG | - | tig0021957:10786-10805 | Msa1395590:CDS | 20.0% |
| !! | TGTTTATCAGTTAAATTAGT+TGG | - | tig0021957:11126-11145 | Msa1395590:intron | 20.0% |
| !!! | TTTTTATCAGTTAAGTTAGT+TGG | - | tig0021957:11270-11289 | Msa1395590:intron | 20.0% |
| !! | GTTGTATGTAATTTAGTTAA+AGG | - | tig0021957:11461-11480 | Msa1395590:CDS | 20.0% |
| !! | TTGTAATGATTGATCAAAAT+AGG | + | tig0021957:11603-11622 | None:intergenic | 20.0% |
| !!! | TGAAATCTTAAATTTAGGTT+GGG | + | tig0021957:11727-11746 | None:intergenic | 20.0% |
| !! | ATGAAATCTTAAATTTAGGT+TGG | + | tig0021957:11728-11747 | None:intergenic | 20.0% |
| !! | GTGAATGAAATCTTAAATTT+AGG | + | tig0021957:11732-11751 | None:intergenic | 20.0% |
| !! | AACAAATTTATGAATACAGT+TGG | + | tig0021957:11772-11791 | None:intergenic | 20.0% |
| !! | GCAAAAAAAAAAAACTCTTA+AGG | + | tig0021957:11805-11824 | None:intergenic | 20.0% |
| !! | AAATGGAAGAAAATAGTTAA+AGG | + | tig0021957:13110-13129 | None:intergenic | 20.0% |
| !! | TTAGAAACAAATATATAGGA+TGG | + | tig0021957:13363-13382 | None:intergenic | 20.0% |
| !! | TTTCTATTAAGATTCCATAT+TGG | + | tig0021957:13681-13700 | None:intergenic | 20.0% |
| !!! | ATTTTTCTATCTATTGATAC+AGG | - | tig0021957:13838-13857 | Msa1395590:CDS | 20.0% |
| !! | ATTCTCGATAATATTCAATT+AGG | - | tig0021957:13876-13895 | Msa1395590:intron | 20.0% |
| !!! | TTTTTGAAGAAGTCAATAAT+AGG | - | tig0021957:14140-14159 | Msa1395590:intron | 20.0% |
| !! | AAATATGTAAAGTTTACCTA+TGG | - | tig0021957:14215-14234 | Msa1395590:intron | 20.0% |
| !! | AACTATGATGAATCTAAAAA+GGG | - | tig0021957:14260-14279 | Msa1395590:intron | 20.0% |
| !!! | TTGCTTATATTTGAAACTAT+AGG | - | tig0021957:14523-14542 | Msa1395590:intron | 20.0% |
| !!! | TGCTTATATTTGAAACTATA+GGG | - | tig0021957:14524-14543 | Msa1395590:intron | 20.0% |
| !!! | CAGAAACAAGTTTTAAATAA+TGG | + | tig0021957:15134-15153 | None:intergenic | 20.0% |
| !! | ATGATTGTAAAATCTTTAAG+TGG | - | tig0021957:15539-15558 | Msa1395590:CDS | 20.0% |
| !! | TGATTGTAAAATCTTTAAGT+GGG | - | tig0021957:15540-15559 | Msa1395590:CDS | 20.0% |
| !! | CAATAATCATCAAAGAATAT+CGG | + | tig0021957:15679-15698 | None:intergenic | 20.0% |
| !!! | TTCCCATTTTTATTCTTTTA+TGG | - | tig0021957:15875-15894 | Msa1395590:five_prime_UTR | 20.0% |
| !!! | TTGATCTTGTTTTGATGAAT+TGG | + | tig0021957:10419-10438 | None:intergenic | 25.0% |
| ! | TTGAACATGAATGATGAAAT+GGG | + | tig0021957:10442-10461 | None:intergenic | 25.0% |
| ! | TTTGAACATGAATGATGAAA+TGG | + | tig0021957:10443-10462 | None:intergenic | 25.0% |
| ! | AAAAGATTCTAACTTGATGA+TGG | + | tig0021957:10475-10494 | None:intergenic | 25.0% |
| ! | ATTGAAAAGAAAATCTGAGA+GGG | + | tig0021957:10518-10537 | None:intergenic | 25.0% |
| !!! | GTTAAATTAGTTGGTGTTTT+TGG | - | tig0021957:11053-11072 | Msa1395590:intron | 25.0% |
| ! | CAACTAATTTCACTGATAAA+CGG | + | tig0021957:11354-11373 | None:intergenic | 25.0% |
| ! | GTTTGATCAGTTAAATTAGT+TGG | - | tig0021957:11413-11432 | Msa1395590:CDS | 25.0% |
| !!! | AAATCTTAAATTTAGGTTGG+GGG | + | tig0021957:11725-11744 | None:intergenic | 25.0% |
| !!! | GAAATCTTAAATTTAGGTTG+GGG | + | tig0021957:11726-11745 | None:intergenic | 25.0% |
| !!! | GTGAAATTTTGTTTTCTTGT+AGG | - | tig0021957:12012-12031 | Msa1395590:intron | 25.0% |
| ! | TAGAAATCAAAGCGTAATAA+AGG | + | tig0021957:12180-12199 | None:intergenic | 25.0% |
| ! | GAGAAAATTGATATACAATG+TGG | + | tig0021957:12878-12897 | None:intergenic | 25.0% |
| !!! | GTTGATAAAGAGAGTATTTT+GGG | - | tig0021957:12916-12935 | Msa1395590:intron | 25.0% |
| ! | TACTAGTCACTAAATACTAT+CGG | - | tig0021957:13165-13184 | Msa1395590:CDS | 25.0% |
| !! | CAATTTTCTCAAGATATTAC+TGG | + | tig0021957:13233-13252 | None:intergenic | 25.0% |
| ! | AAACAAATATATAGGATGGA+AGG | + | tig0021957:13359-13378 | None:intergenic | 25.0% |
| !!! | GAACTATTTTGTACTAGTTT+AGG | - | tig0021957:13450-13469 | Msa1395590:CDS | 25.0% |
| !!! | TATTTTGTACTAGTTTAGGT+AGG | - | tig0021957:13454-13473 | Msa1395590:CDS | 25.0% |
| ! | ATGTTTAGACCAAAAAATCA+TGG | + | tig0021957:13537-13556 | None:intergenic | 25.0% |
| ! | TATTAAGATTCCATATTGGT+CGG | + | tig0021957:13677-13696 | None:intergenic | 25.0% |
| ! | GTACAAAGTTTGAATTATTG+AGG | + | tig0021957:13905-13924 | None:intergenic | 25.0% |
| ! | TCAAACTTTGTACTATATGA+TGG | - | tig0021957:13912-13931 | Msa1395590:intron | 25.0% |
| !! | TTTTGCGGTCAATTAAAAAT+CGG | - | tig0021957:14014-14033 | Msa1395590:CDS | 25.0% |
| ! | ATAATAGGCTTCTTATATGT+TGG | - | tig0021957:14155-14174 | Msa1395590:intron | 25.0% |
| ! | CAACTATGATGAATCTAAAA+AGG | - | tig0021957:14259-14278 | Msa1395590:intron | 25.0% |
| ! | TTATGAACTAGAAAAACGAA+CGG | + | tig0021957:14430-14449 | None:intergenic | 25.0% |
| ! | TACACTGCATTATGAAAATA+CGG | - | tig0021957:14680-14699 | Msa1395590:intron | 25.0% |
| ! | CATTATATCATGACAAAACA+TGG | + | tig0021957:14996-15015 | None:intergenic | 25.0% |
| ! | GATATAATGCTATTGAACTT+TGG | - | tig0021957:15007-15026 | Msa1395590:intron | 25.0% |
| ! | TCTCTATTACTTACTATCAT+AGG | - | tig0021957:15037-15056 | Msa1395590:intron | 25.0% |
| ! | AACACATTATGTCTTTCAAT+TGG | - | tig0021957:15070-15089 | Msa1395590:intron | 25.0% |
| ! | ATACAAGTTATATCCATTGA+AGG | + | tig0021957:15227-15246 | None:intergenic | 25.0% |
| ! | TAATAATCTTTCCCTTAACA+TGG | + | tig0021957:15337-15356 | None:intergenic | 25.0% |
| CATTGAAAAGAAAATCTGAG+AGG | + | tig0021957:10519-10538 | None:intergenic | 30.0% | |
| ! | CTCTCAGATTTTCTTTTCAA+TGG | - | tig0021957:10517-10536 | Msa1395590:three_prime_UTR | 30.0% |
| TTGTAGGTGATTGAATTTGA+AGG | + | tig0021957:10548-10567 | None:intergenic | 30.0% | |
| TCAAATTCAATCACCTACAA+TGG | - | tig0021957:10548-10567 | Msa1395590:three_prime_UTR | 30.0% | |
| TCAAATATTACCACAGATAC+TGG | - | tig0021957:10644-10663 | Msa1395590:three_prime_UTR | 30.0% | |
| TTCTTAAGAGAATCAAATCC+AGG | + | tig0021957:10707-10726 | None:intergenic | 30.0% | |
| !!! | TTTGTTTTGCTACTAGACAT+TGG | - | tig0021957:10876-10895 | Msa1395590:intron | 30.0% |
| ATCGAACATATAGAGATTCA+GGG | + | tig0021957:11649-11668 | None:intergenic | 30.0% | |
| TATCGAACATATAGAGATTC+AGG | + | tig0021957:11650-11669 | None:intergenic | 30.0% | |
| TGACTCATGAAATCAAAGAA+AGG | + | tig0021957:11684-11703 | None:intergenic | 30.0% | |
| ! | TTTGATTTCATGAGTCATGA+TGG | - | tig0021957:11687-11706 | Msa1395590:intron | 30.0% |
| CTCATTAATATATCCTGACA+AGG | + | tig0021957:12143-12162 | None:intergenic | 30.0% | |
| TCAACTTTCCAATTTCCATT+AGG | - | tig0021957:12224-12243 | Msa1395590:intron | 30.0% | |
| TATAGCAACCTAATGGAAAT+TGG | + | tig0021957:12235-12254 | None:intergenic | 30.0% | |
| TTGATCTCTTTGATATGATC+TGG | + | tig0021957:12258-12277 | None:intergenic | 30.0% | |
| CATATCAAAGAGATCAATTG+AGG | - | tig0021957:12261-12280 | Msa1395590:intron | 30.0% | |
| TTCAGAAATGAGGTTAATTC+TGG | + | tig0021957:12313-12332 | None:intergenic | 30.0% | |
| ! | TAACATAGTTTCTGGAAATC+CGG | - | tig0021957:12396-12415 | Msa1395590:intron | 30.0% |
| CCATGAAATGTACATGTTAT+CGG | + | tig0021957:12533-12552 | None:intergenic | 30.0% | |
| !!! | AAACACGTGAGTTTTGTTAA+TGG | - | tig0021957:12631-12650 | Msa1395590:intron | 30.0% |
| !!! | GGTTGATAAAGAGAGTATTT+TGG | - | tig0021957:12915-12934 | Msa1395590:intron | 30.0% |
| GACTGCAAAGAAAAAGATAA+AGG | + | tig0021957:13043-13062 | None:intergenic | 30.0% | |
| ATGAGAAAAAAAAAGCCTTG+AGG | + | tig0021957:13065-13084 | None:intergenic | 30.0% | |
| TGACTAGTATGAACAAAGTT+AGG | + | tig0021957:13154-13173 | None:intergenic | 30.0% | |
| ATTGAAATTACCAGATCACT+TGG | - | tig0021957:13481-13500 | Msa1395590:CDS | 30.0% | |
| CACTTGGCAATAGTTAAATT+AGG | - | tig0021957:13497-13516 | Msa1395590:CDS | 30.0% | |
| ! | TGTCATATATTAAGGTGCTT+TGG | - | tig0021957:13558-13577 | Msa1395590:CDS | 30.0% |
| ACTGCAGATAAAACAGAAAA+GGG | + | tig0021957:13770-13789 | None:intergenic | 30.0% | |
| CACACTAGAATTGTAAAACA+AGG | + | tig0021957:13958-13977 | None:intergenic | 30.0% | |
| TACAATTCTAGTGTGAATAC+AGG | - | tig0021957:13963-13982 | Msa1395590:intron | 30.0% | |
| ACAATTCTAGTGTGAATACA+GGG | - | tig0021957:13964-13983 | Msa1395590:intron | 30.0% | |
| GTGTAAAGCTCAAGATAATT+GGG | - | tig0021957:14036-14055 | Msa1395590:CDS | 30.0% | |
| ACTTTACATATTTCCTAAGC+TGG | + | tig0021957:14208-14227 | None:intergenic | 30.0% | |
| TCAATAATAGACGATTCTTG+AGG | + | tig0021957:14753-14772 | None:intergenic | 30.0% | |
| TATTGTCCAGCATACTTATT+AGG | - | tig0021957:14846-14865 | Msa1395590:intron | 30.0% | |
| ATATCACCTAATAAGTATGC+TGG | + | tig0021957:14855-14874 | None:intergenic | 30.0% | |
| ! | TTTGAGATTCTTCTGAACAT+CGG | + | tig0021957:15295-15314 | None:intergenic | 30.0% |
| TCTTCCAAAATAAAGAGCAA+TGG | - | tig0021957:15396-15415 | Msa1395590:CDS | 30.0% | |
| !! | AGTTCCATTGCTCTTTATTT+TGG | + | tig0021957:15403-15422 | None:intergenic | 30.0% |
| TGCTTGTAAAATTCATGGAA+TGG | + | tig0021957:15461-15480 | None:intergenic | 30.0% | |
| AACGATGCTTGTAAAATTCA+TGG | + | tig0021957:15466-15485 | None:intergenic | 30.0% | |
| TTACAATCATTAACTCCTCT+TGG | + | tig0021957:15529-15548 | None:intergenic | 30.0% | |
| TATCGGATGAAATCAAAATG+TGG | + | tig0021957:15662-15681 | None:intergenic | 30.0% | |
| ! | GAAAATCATTTTCAGAAGAG+TGG | + | tig0021957:15725-15744 | None:intergenic | 30.0% |
| TGACGAAACATATATGAACA+TGG | + | tig0021957:15747-15766 | None:intergenic | 30.0% | |
| ! | GTATTTTGTGTAAAGGATAG+TGG | - | tig0021957:15789-15808 | Msa1395590:five_prime_UTR | 30.0% |
| TTTCTTAGCGATGAAGTAGT+TGG | + | tig0021957:10297-10316 | None:intergenic | 35.0% | |
| ! | TTTTCCCTTCTTTCTCATCT+GGG | - | tig0021957:10491-10510 | Msa1395590:three_prime_UTR | 35.0% |
| TTTCTTAGGTTTATGAGCCT+TGG | - | tig0021957:10800-10819 | Msa1395590:CDS | 35.0% | |
| CGATAGCAATTTAGACGAAA+AGG | + | tig0021957:11870-11889 | None:intergenic | 35.0% | |
| !! | GAAAAGTATCCAACTTGCTA+TGG | + | tig0021957:12089-12108 | None:intergenic | 35.0% |
| !! | GCAAGTTGGATACTTTTCAT+TGG | - | tig0021957:12091-12110 | Msa1395590:CDS | 35.0% |
| AACCTCATTTCTGAATGACA+TGG | - | tig0021957:12318-12337 | Msa1395590:CDS | 35.0% | |
| ! | AACATAGTTTCTGGAAATCC+GGG | - | tig0021957:12397-12416 | Msa1395590:intron | 35.0% |
| ACTCTTTCGTCAATAAATCC+CGG | + | tig0021957:12418-12437 | None:intergenic | 35.0% | |
| ! | TTACACTTGAGTGCTATTGT+TGG | + | tig0021957:12493-12512 | None:intergenic | 35.0% |
| ACAATAGCACTCAAGTGTAA+AGG | - | tig0021957:12493-12512 | Msa1395590:intron | 35.0% | |
| CCGATAACATGTACATTTCA+TGG | - | tig0021957:12530-12549 | Msa1395590:intron | 35.0% | |
| TGAATTCAATCTCGCTTCAA+CGG | - | tig0021957:12597-12616 | Msa1395590:intron | 35.0% | |
| GTTAATGGAACGCTAAAGAA+TGG | - | tig0021957:12646-12665 | Msa1395590:intron | 35.0% | |
| !! | AAGCACTTTTGATGATAGAC+CGG | - | tig0021957:12669-12688 | Msa1395590:intron | 35.0% |
| ATAGACCGGTTACATTTAGA+GGG | - | tig0021957:12683-12702 | Msa1395590:intron | 35.0% | |
| TGCAAATTACGGTATATTCG+GGG | + | tig0021957:12742-12761 | None:intergenic | 35.0% | |
| GTGCAAATTACGGTATATTC+GGG | + | tig0021957:12743-12762 | None:intergenic | 35.0% | |
| CGTGCAAATTACGGTATATT+CGG | + | tig0021957:12744-12763 | None:intergenic | 35.0% | |
| ! | GCTTTAGATCGTGCAAATTA+CGG | + | tig0021957:12753-12772 | None:intergenic | 35.0% |
| TATCACGAAAAACTGAACCA+GGG | + | tig0021957:12804-12823 | None:intergenic | 35.0% | |
| ! | TCCTTCAACAGAGTTTTCAA+GGG | + | tig0021957:12845-12864 | None:intergenic | 35.0% |
| ! | TTTTCTCTCTGCTTATGTTG+TGG | - | tig0021957:12891-12910 | Msa1395590:intron | 35.0% |
| CTTCAGATAGAAGACGTTTA+TGG | + | tig0021957:13271-13290 | None:intergenic | 35.0% | |
| AAGTTCAACCATCAAATCCT+TGG | - | tig0021957:13323-13342 | Msa1395590:CDS | 35.0% | |
| TTAGAGATCCAAGGATTTGA+TGG | + | tig0021957:13334-13353 | None:intergenic | 35.0% | |
| TTAACTATTGCCAAGTGATC+TGG | + | tig0021957:13494-13513 | None:intergenic | 35.0% | |
| CCAAAAAATCATGGCTCAAT+TGG | + | tig0021957:13528-13547 | None:intergenic | 35.0% | |
| !!! | CCAATTGAGCCATGATTTTT+TGG | - | tig0021957:13525-13544 | Msa1395590:CDS | 35.0% |
| !!! | GTTAGCTTTTGGAGTTGAAT+TGG | + | tig0021957:13610-13629 | None:intergenic | 35.0% |
| CACTGCAGATAAAACAGAAA+AGG | + | tig0021957:13771-13790 | None:intergenic | 35.0% | |
| ! | GAAATGAGGATAGTGTTTTG+CGG | - | tig0021957:13999-14018 | Msa1395590:intron | 35.0% |
| GGTGTAAAGCTCAAGATAAT+TGG | - | tig0021957:14035-14054 | Msa1395590:CDS | 35.0% | |
| !! | TTTCTGCTTTTAACCAGCTT+AGG | - | tig0021957:14192-14211 | Msa1395590:intron | 35.0% |
| TAGTTGTCTTCATCCATTGT+AGG | + | tig0021957:14245-14264 | None:intergenic | 35.0% | |
| TTGCATTCAATACAAAGCAG+TGG | - | tig0021957:14305-14324 | Msa1395590:intron | 35.0% | |
| GTTATTAGCATACCTAGTGA+AGG | + | tig0021957:14798-14817 | None:intergenic | 35.0% | |
| CAAGAGAGACATTTATGATG+GGG | + | tig0021957:14970-14989 | None:intergenic | 35.0% | |
| CCAAGAGAGACATTTATGAT+GGG | + | tig0021957:14971-14990 | None:intergenic | 35.0% | |
| ACGAGTATAATGCCATGTTA+AGG | - | tig0021957:15322-15341 | Msa1395590:CDS | 35.0% | |
| CGAGTATAATGCCATGTTAA+GGG | - | tig0021957:15323-15342 | Msa1395590:CDS | 35.0% | |
| !!! | TGCTCTTTATTTTGGAAGAG+TGG | + | tig0021957:15395-15414 | None:intergenic | 35.0% |
| !!! | GCATCGTTTTAGCTTAACAA+TGG | - | tig0021957:15478-15497 | Msa1395590:CDS | 35.0% |
| !!! | GGAATACTATGGTTTTGAAG+AGG | + | tig0021957:15583-15602 | None:intergenic | 35.0% |
| CTTTACACAAAATACAGCAC+TGG | + | tig0021957:15784-15803 | None:intergenic | 35.0% | |
| ! | CAGTGCTGTATTTTGTGTAA+AGG | - | tig0021957:15782-15801 | Msa1395590:five_prime_UTR | 35.0% |
| !!! | GGCACTAAATTTGTTTTTGC+AGG | - | tig0021957:15810-15829 | Msa1395590:five_prime_UTR | 35.0% |
| GCTGTATTTGTAGCTGGATT+TGG | + | tig0021957:10235-10254 | None:intergenic | 40.0% | |
| ! | CTTTTCCCTTCTTTCTCATC+TGG | - | tig0021957:10490-10509 | Msa1395590:three_prime_UTR | 40.0% |
| GTAATCAACACCAGTATCTG+TGG | + | tig0021957:10657-10676 | None:intergenic | 40.0% | |
| !! | TCAAATCCAGGAAGTGTTTC+TGG | + | tig0021957:10695-10714 | None:intergenic | 40.0% |
| !! | TAGGTGGTTTGTTAGTCGAT+TGG | - | tig0021957:10850-10869 | Msa1395590:CDS | 40.0% |
| ! | TTTTGCTACTAGACATTGGC+TGG | - | tig0021957:10880-10899 | Msa1395590:intron | 40.0% |
| CATATAGAGATTCAGGGAGA+AGG | + | tig0021957:11643-11662 | None:intergenic | 40.0% | |
| CAATATAGGCATGCTCATGT+AGG | - | tig0021957:11928-11947 | Msa1395590:intron | 40.0% | |
| ACCAAACGCAAAACTGAACT+TGG | - | tig0021957:12052-12071 | Msa1395590:intron | 40.0% | |
| ! | ACCAAGTTCAGTTTTGCGTT+TGG | + | tig0021957:12056-12075 | None:intergenic | 40.0% |
| AAACGCAAAACTGAACTTGG+TGG | - | tig0021957:12055-12074 | Msa1395590:intron | 40.0% | |
| GATCTGGTATAGCAACCTAA+TGG | + | tig0021957:12242-12261 | None:intergenic | 40.0% | |
| CTCCATGTCATTCAGAAATG+AGG | + | tig0021957:12323-12342 | None:intergenic | 40.0% | |
| TGTGCAAATCTACGTGATCT+CGG | - | tig0021957:12373-12392 | Msa1395590:intron | 40.0% | |
| GATCTCGGTAACATAGTTTC+TGG | - | tig0021957:12388-12407 | Msa1395590:intron | 40.0% | |
| TCTTGTCACAACTCAAGCAA+GGG | - | tig0021957:12466-12485 | Msa1395590:intron | 40.0% | |
| TTCATAACCAACAGCAGTAG+CGG | + | tig0021957:12581-12600 | None:intergenic | 40.0% | |
| GATAGACCGGTTACATTTAG+AGG | - | tig0021957:12682-12701 | Msa1395590:intron | 40.0% | |
| GTATCACGAAAAACTGAACC+AGG | + | tig0021957:12805-12824 | None:intergenic | 40.0% | |
| TCCCTTGAAAACTCTGTTGA+AGG | - | tig0021957:12841-12860 | Msa1395590:intron | 40.0% | |
| ! | GTCCTTCAACAGAGTTTTCA+AGG | + | tig0021957:12846-12865 | None:intergenic | 40.0% |
| !!! | AAAGAGAGTATTTTGGGTCC+TGG | - | tig0021957:12922-12941 | Msa1395590:intron | 40.0% |
| GATACAGAAAGATGCTTACC+AGG | + | tig0021957:12943-12962 | None:intergenic | 40.0% | |
| ! | CTTTTTCTTTGCAGTCCTCA+AGG | - | tig0021957:13047-13066 | Msa1395590:intron | 40.0% |
| CAACTCCAAAAGCTAACTAC+AGG | - | tig0021957:13613-13632 | Msa1395590:CDS | 40.0% | |
| TCCAAAAGCTAACTACAGGA+GGG | - | tig0021957:13617-13636 | Msa1395590:CDS | 40.0% | |
| ! | GGAGGGACAATTTTTCTATG+AGG | - | tig0021957:13634-13653 | Msa1395590:CDS | 40.0% |
| GATCATAGATCCGACCAATA+TGG | - | tig0021957:13664-13683 | Msa1395590:CDS | 40.0% | |
| TCAACAGTGTGCACAAAAAC+TGG | + | tig0021957:13740-13759 | None:intergenic | 40.0% | |
| TGCCTATGCTAATGCAATAC+AGG | + | tig0021957:13817-13836 | None:intergenic | 40.0% | |
| GGTAAAGAAGCTCAGAAATG+AGG | - | tig0021957:13985-14004 | Msa1395590:intron | 40.0% | |
| !! | AAAAAGGGAGCTTGTTGTGA+TGG | - | tig0021957:14275-14294 | Msa1395590:intron | 40.0% |
| !! | AAAAGGGAGCTTGTTGTGAT+GGG | - | tig0021957:14276-14295 | Msa1395590:intron | 40.0% |
| TAGTGACAGCTTTACCTTGT+TGG | + | tig0021957:14402-14421 | None:intergenic | 40.0% | |
| TTACTAATGTCAGTCACACG+TGG | - | tig0021957:14450-14469 | Msa1395590:intron | 40.0% | |
| GAATCATTCGTAGATCCAAG+CGG | + | tig0021957:14660-14679 | None:intergenic | 40.0% | |
| ATTCTTGAGGTTGACATGGT+GGG | + | tig0021957:14740-14759 | None:intergenic | 40.0% | |
| ATTAGCATACCTAGTGAAGG+TGG | + | tig0021957:14795-14814 | None:intergenic | 40.0% | |
| CCCATCATAAATGTCTCTCT+TGG | - | tig0021957:14968-14987 | Msa1395590:intron | 40.0% | |
| GCCAAGAGAGACATTTATGA+TGG | + | tig0021957:14972-14991 | None:intergenic | 40.0% | |
| ! | TGGTGTTTTGCTACCTTCAA+TGG | - | tig0021957:15211-15230 | Msa1395590:intron | 40.0% |
| TATGATGCAGAATGCAAGAG+TGG | - | tig0021957:15252-15271 | Msa1395590:CDS | 40.0% | |
| !! | ATGCAAGAGTGGTTCTGAAA+TGG | - | tig0021957:15263-15282 | Msa1395590:CDS | 40.0% |
| TTTGGAAGAGTGGTTAGATG+AGG | + | tig0021957:15385-15404 | None:intergenic | 40.0% | |
| AGAGCAATGGAACTTAGCAT+AGG | - | tig0021957:15409-15428 | Msa1395590:CDS | 40.0% | |
| TCTTTGCATCAACCGATCAT+CGG | - | tig0021957:15434-15453 | Msa1395590:CDS | 40.0% | |
| TTGATTGAAACCTGACCAAG+AGG | - | tig0021957:15511-15530 | Msa1395590:CDS | 40.0% | |
| ATCATTAACTCCTCTTGGTC+AGG | + | tig0021957:15524-15543 | None:intergenic | 40.0% | |
| TTCGACTAGGAGGAATACTA+TGG | + | tig0021957:15594-15613 | None:intergenic | 40.0% | |
| CAATGCAGGAATATTCGACT+AGG | + | tig0021957:15607-15626 | None:intergenic | 40.0% | |
| !! | TACAGCACTGGCTATATACA+AGG | + | tig0021957:15772-15791 | None:intergenic | 40.0% |
| !! | GGTGTTGCTGTATTTGTAGC+TGG | + | tig0021957:10241-10260 | None:intergenic | 45.0% |
| ! | AGCGATGAAGTAGTTGGTGT+TGG | + | tig0021957:10291-10310 | None:intergenic | 45.0% |
| ACCCTTTGTGCTTGTTTACC+AGG | - | tig0021957:10572-10591 | Msa1395590:three_prime_UTR | 45.0% | |
| CCCTGGTAAACAAGCACAAA+GGG | + | tig0021957:10576-10595 | None:intergenic | 45.0% | |
| CCCTTTGTGCTTGTTTACCA+GGG | - | tig0021957:10573-10592 | Msa1395590:three_prime_UTR | 45.0% | |
| ACAACATCAAGAACATGCCC+TGG | + | tig0021957:10593-10612 | None:intergenic | 45.0% | |
| ACAGTCACAAGCTGTGTTCT+TGG | - | tig0021957:10733-10752 | Msa1395590:CDS | 45.0% | |
| CACTAGTCATGCTTCTCTCT+TGG | - | tig0021957:10762-10781 | Msa1395590:CDS | 45.0% | |
| AGGTTTATGAGCCTTGGTGA+TGG | - | tig0021957:10806-10825 | Msa1395590:CDS | 45.0% | |
| GTGGCGTGTGGTTTAAACTT+AGG | - | tig0021957:10831-10850 | Msa1395590:CDS | 45.0% | |
| GCGTGTGGTTTAAACTTAGG+TGG | - | tig0021957:10834-10853 | Msa1395590:CDS | 45.0% | |
| GAGCTTTCTCCATAGCAAGT+TGG | - | tig0021957:12077-12096 | Msa1395590:CDS | 45.0% | |
| TGAGTCTTCGATACCTTGTC+AGG | - | tig0021957:12127-12146 | Msa1395590:CDS | 45.0% | |
| CTCTTGTCACAACTCAAGCA+AGG | - | tig0021957:12465-12484 | Msa1395590:intron | 45.0% | |
| TCATAACCAACAGCAGTAGC+GGG | + | tig0021957:12580-12599 | None:intergenic | 45.0% | |
| TGCCTCCCTCTAAATGTAAC+CGG | + | tig0021957:12691-12710 | None:intergenic | 45.0% | |
| GGGAGGAACTCGTGAAATAA+AGG | + | tig0021957:12784-12803 | None:intergenic | 45.0% | |
| TTATTTCACGAGTTCCTCCC+TGG | - | tig0021957:12784-12803 | Msa1395590:intron | 45.0% | |
| TCTCTCTGCTTATGTTGTGG+AGG | - | tig0021957:12894-12913 | Msa1395590:intron | 45.0% | |
| ! | GTGTCGACATTTCAGTGTCA+TGG | + | tig0021957:13211-13230 | None:intergenic | 45.0% |
| TGGAAGGTCTTAGAGATCCA+AGG | + | tig0021957:13343-13362 | None:intergenic | 45.0% | |
| CTCCAAAAGCTAACTACAGG+AGG | - | tig0021957:13616-13635 | Msa1395590:CDS | 45.0% | |
| !!! | TCCCTCCTGTAGTTAGCTTT+TGG | + | tig0021957:13621-13640 | None:intergenic | 45.0% |
| TAATGCAATACAGGCCACCA+AGG | + | tig0021957:13808-13827 | None:intergenic | 45.0% | |
| GGCCTGTATTGCATTAGCAT+AGG | - | tig0021957:13812-13831 | Msa1395590:CDS | 45.0% | |
| TACCTATGGCGTTCCTACAA+TGG | - | tig0021957:14229-14248 | Msa1395590:intron | 45.0% | |
| ATCCATTGTAGGAACGCCAT+AGG | + | tig0021957:14234-14253 | None:intergenic | 45.0% | |
| GTGGATCATCACATAAGCGA+AGG | - | tig0021957:14324-14343 | Msa1395590:intron | 45.0% | |
| ACCTTGTTGGCAGGTAAACT+CGG | + | tig0021957:14389-14408 | None:intergenic | 45.0% | |
| TCATTGATCAGCAAACCGCT+TGG | - | tig0021957:14642-14661 | Msa1395590:intron | 45.0% | |
| GATTCTTGAGGTTGACATGG+TGG | + | tig0021957:14741-14760 | None:intergenic | 45.0% | |
| GACGATTCTTGAGGTTGACA+TGG | + | tig0021957:14744-14763 | None:intergenic | 45.0% | |
| ! | CATTTATGATGGGGAGACAG+TGG | + | tig0021957:14961-14980 | None:intergenic | 45.0% |
| AGTGGTTAGATGAGGAGGAT+TGG | + | tig0021957:15377-15396 | None:intergenic | 45.0% | |
| TCATGGAATGGTCCGATGAT+CGG | + | tig0021957:15449-15468 | None:intergenic | 45.0% | |
| TGCAGGAATATTCGACTAGG+AGG | + | tig0021957:15604-15623 | None:intergenic | 45.0% | |
| TACACTGCAGCTTTCAATGC+AGG | + | tig0021957:15621-15640 | None:intergenic | 45.0% | |
| GCATTGAAAGCTGCAGTGTA+TGG | - | tig0021957:15621-15640 | Msa1395590:five_prime_UTR | 45.0% | |
| GGGACCCAGATGAGAAAGAA+GGG | + | tig0021957:10498-10517 | None:intergenic | 50.0% | |
| AGGGACCCAGATGAGAAAGA+AGG | + | tig0021957:10499-10518 | None:intergenic | 50.0% | |
| !! | AGCACAAAGGGTGCCATTGT+AGG | + | tig0021957:10564-10583 | None:intergenic | 50.0% |
| GCCCTGGTAAACAAGCACAA+AGG | + | tig0021957:10577-10596 | None:intergenic | 50.0% | |
| AAGCTGCCAGAAACACTTCC+TGG | - | tig0021957:10686-10705 | Msa1395590:three_prime_UTR | 50.0% | |
| GTCACAAGCTGTGTTCTTGG+AGG | - | tig0021957:10736-10755 | Msa1395590:CDS | 50.0% | |
| ! | CAGCAGTAGCGGGACTATTT+GGG | + | tig0021957:12570-12589 | None:intergenic | 50.0% |
| ! | ACAGCAGTAGCGGGACTATT+TGG | + | tig0021957:12571-12590 | None:intergenic | 50.0% |
| AATAGTCCCGCTACTGCTGT+TGG | - | tig0021957:12571-12590 | Msa1395590:intron | 50.0% | |
| GACCGGTTACATTTAGAGGG+AGG | - | tig0021957:12686-12705 | Msa1395590:intron | 50.0% | |
| CACGAAAAACTGAACCAGGG+AGG | + | tig0021957:12801-12820 | None:intergenic | 50.0% | |
| TGGCAGTGTCAGTGCTTCAT+AGG | + | tig0021957:13191-13210 | None:intergenic | 50.0% | |
| ATCTGCAGTGAGCTTCCTTG+CGG | - | tig0021957:13781-13800 | Msa1395590:CDS | 50.0% | |
| ACCGAGTTTACCTGCCAACA+AGG | - | tig0021957:14385-14404 | Msa1395590:intron | 50.0% | |
| GACAGCTTTACCTTGTTGGC+AGG | + | tig0021957:14398-14417 | None:intergenic | 50.0% | |
| !! | GCGGTTTGCTGATCAATGAC+TGG | + | tig0021957:14641-14660 | None:intergenic | 50.0% |
| ACGGCAAAGCAGCATAGTGT+TGG | - | tig0021957:14699-14718 | Msa1395590:intron | 50.0% | |
| ATTCCTCCTCCACCTTCACT+AGG | - | tig0021957:14783-14802 | Msa1395590:intron | 50.0% | |
| ATACCTAGTGAAGGTGGAGG+AGG | + | tig0021957:14789-14808 | None:intergenic | 50.0% | |
| AGCATACCTAGTGAAGGTGG+AGG | + | tig0021957:14792-14811 | None:intergenic | 50.0% | |
| GGAAGAGTGGTTAGATGAGG+AGG | + | tig0021957:15382-15401 | None:intergenic | 50.0% | |
| !! | ATGAGCCTTGGTGATGGTCG+TGG | - | tig0021957:10812-10831 | Msa1395590:CDS | 55.0% |
| ACACGCCACGACCATCACCA+AGG | + | tig0021957:10820-10839 | None:intergenic | 60.0% | |
| !! | TTGGTGATGGTCGTGGCGTG+TGG | - | tig0021957:10819-10838 | Msa1395590:CDS | 60.0% |
| GTGAGCTTCCTTGCGGACCT+TGG | - | tig0021957:13788-13807 | Msa1395590:CDS | 60.0% | |
| AGCTTCCTTGCGGACCTTGG+TGG | - | tig0021957:13791-13810 | Msa1395590:CDS | 60.0% | |
| ACAGGCCACCAAGGTCCGCA+AGG | + | tig0021957:13799-13818 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0021957 | gene | 10196 | 15937 | 10196 | ID=Msa1395590;Name=Msa1395590 |
| tig0021957 | mRNA | 10196 | 15937 | 10196 | ID=Msa1395590-mRNA-1;Parent=Msa1395590;Name=Msa1395590-mRNA-1;_AED=0.08;_eAED=0.08;_QI=340|0.85|0.87|1|1|1|8|512|622 |
| tig0021957 | exon | 10196 | 10871 | 10196 | ID=Msa1395590-mRNA-1:exon:14998;Parent=Msa1395590-mRNA-1 |
| tig0021957 | exon | 11329 | 11491 | 11329 | ID=Msa1395590-mRNA-1:exon:14997;Parent=Msa1395590-mRNA-1 |
| tig0021957 | exon | 11727 | 11924 | 11727 | ID=Msa1395590-mRNA-1:exon:14996;Parent=Msa1395590-mRNA-1 |
| tig0021957 | exon | 12070 | 12159 | 12070 | ID=Msa1395590-mRNA-1:exon:14995;Parent=Msa1395590-mRNA-1 |
| tig0021957 | exon | 12274 | 12344 | 12274 | ID=Msa1395590-mRNA-1:exon:14994;Parent=Msa1395590-mRNA-1 |
| tig0021957 | exon | 13163 | 13887 | 13163 | ID=Msa1395590-mRNA-1:exon:14993;Parent=Msa1395590-mRNA-1 |
| tig0021957 | exon | 14008 | 14099 | 14008 | ID=Msa1395590-mRNA-1:exon:14992;Parent=Msa1395590-mRNA-1 |
| tig0021957 | exon | 15232 | 15937 | 15232 | ID=Msa1395590-mRNA-1:exon:14991;Parent=Msa1395590-mRNA-1 |
| tig0021957 | five_prime_UTR | 15598 | 15937 | 15598 | ID=Msa1395590-mRNA-1:five_prime_utr;Parent=Msa1395590-mRNA-1 |
| tig0021957 | CDS | 15232 | 15597 | 15232 | ID=Msa1395590-mRNA-1:cds;Parent=Msa1395590-mRNA-1 |
| tig0021957 | CDS | 14008 | 14099 | 14008 | ID=Msa1395590-mRNA-1:cds;Parent=Msa1395590-mRNA-1 |
| tig0021957 | CDS | 13163 | 13887 | 13163 | ID=Msa1395590-mRNA-1:cds;Parent=Msa1395590-mRNA-1 |
| tig0021957 | CDS | 12274 | 12344 | 12274 | ID=Msa1395590-mRNA-1:cds;Parent=Msa1395590-mRNA-1 |
| tig0021957 | CDS | 12070 | 12159 | 12070 | ID=Msa1395590-mRNA-1:cds;Parent=Msa1395590-mRNA-1 |
| tig0021957 | CDS | 11727 | 11924 | 11727 | ID=Msa1395590-mRNA-1:cds;Parent=Msa1395590-mRNA-1 |
| tig0021957 | CDS | 11329 | 11491 | 11329 | ID=Msa1395590-mRNA-1:cds;Parent=Msa1395590-mRNA-1 |
| tig0021957 | CDS | 10708 | 10871 | 10708 | ID=Msa1395590-mRNA-1:cds;Parent=Msa1395590-mRNA-1 |
| tig0021957 | three_prime_UTR | 10196 | 10707 | 10196 | ID=Msa1395590-mRNA-1:three_prime_utr;Parent=Msa1395590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
