Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1028910 | XP_003624171.2 | 93.750 | 112 | 1 | 1 | 1 | 112 | 1 | 106 | 8.38e-66 | 207 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1028910 | sp|Q9FFD8|MBS2_ARATH | 72.321 | 112 | 23 | 2 | 1 | 112 | 1 | 104 | 2.33e-51 | 163 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1028910 | G7KRI0 | 93.750 | 112 | 1 | 1 | 1 | 112 | 1 | 106 | 4.00e-66 | 207 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1028910 | Msa1068040 | 0.998165 | 9.770045e-258 | -8.615850e-47 |
| Msa1028910 | Msa1121870 | 0.905853 | 2.765939e-80 | -8.615850e-47 |
| Msa0482840 | Msa1028910 | -0.805367 | 1.381214e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1028910 | MtrunA17_Chr7g0249291 | 93.750 | 112 | 1 | 1 | 1 | 112 | 1 | 106 | 7.71e-70 | 207 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1028910 | AT5G16470.2 | 72.321 | 112 | 23 | 2 | 1 | 112 | 1 | 104 | 2.37e-52 | 163 |
| Msa1028910 | AT5G16470.1 | 72.321 | 112 | 23 | 2 | 1 | 112 | 1 | 104 | 2.37e-52 | 163 |
| Msa1028910 | AT3G02790.1 | 72.321 | 112 | 24 | 2 | 1 | 112 | 1 | 105 | 1.36e-51 | 161 |
Find 74 sgRNAs with CRISPR-Local
Find 350 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTATGGGTTAGAAGAAAAT+TGG | 0.146164 | 7_1:+62110578 | Msa1028910:CDS |
| TCCTTCGCCGTGTGCTTCTT+TGG | 0.219018 | 7_1:-62109049 | None:intergenic |
| TCTTCCTCAAAAGGGATCTT+TGG | 0.247762 | 7_1:-62109241 | None:intergenic |
| GAAGCTATTGTTGGCGGTCT+TGG | 0.275282 | 7_1:+62110787 | Msa1028910:CDS |
| TCATCACTACCCTCTAAATT+TGG | 0.297989 | 7_1:-62110811 | None:intergenic |
| CGGTCTTGGGCCAAATTTAG+AGG | 0.351765 | 7_1:+62110801 | Msa1028910:CDS |
| GTAGCAAAGGTGGTGGGAGG+TGG | 0.357582 | 7_1:+62110454 | Msa1028910:intron |
| AAGCTATTGTTGGCGGTCTT+GGG | 0.360222 | 7_1:+62110788 | Msa1028910:CDS |
| CGAGAAATTGAAGCTATTGT+TGG | 0.362041 | 7_1:+62110778 | Msa1028910:CDS |
| TAAAGAGGCAAGAGGGTAGT+TGG | 0.365745 | 7_1:+62110693 | Msa1028910:intron |
| GTAGTTGGATTAGTGGTCAT+TGG | 0.381796 | 7_1:+62110708 | Msa1028910:CDS |
| GGGTGTGGAGTTGGCGGTGG+AGG | 0.407827 | 7_1:+62110729 | Msa1028910:CDS |
| TTATGGGTTAGAAGAAAATT+GGG | 0.415374 | 7_1:+62110579 | Msa1028910:CDS |
| TCGAGCAACTTGGTGGAAAT+TGG | 0.417787 | 7_1:+62110534 | Msa1028910:CDS |
| ATTGGGTGTGGAGTTGGCGG+TGG | 0.425398 | 7_1:+62110726 | Msa1028910:CDS |
| TAGTTGGATTAGTGGTCATT+GGG | 0.431442 | 7_1:+62110709 | Msa1028910:CDS |
| GGCTCTTTGAAGGAGGTAGA+AGG | 0.438932 | 7_1:+62110475 | Msa1028910:CDS |
| ATCTGCATCGATTTCACATC+AGG | 0.442800 | 7_1:-62109199 | None:intergenic |
| GGTGGGAGGTGGCTCTTTGA+AGG | 0.446880 | 7_1:+62110465 | Msa1028910:CDS |
| CAAGAGGGTAGTTGGATTAG+TGG | 0.446935 | 7_1:+62110701 | Msa1028910:CDS |
| GGGGACGTGATACTTCTTAT+GGG | 0.450855 | 7_1:+62110563 | Msa1028910:CDS |
| GCCAAAGAAGCACACGGCGA+AGG | 0.455639 | 7_1:+62109048 | Msa1028910:CDS |
| GAAAAGCCGGTTTGCTTGAT+CGG | 0.458319 | 7_1:+62109116 | Msa1028910:CDS |
| AAGCCTCGCCCTGGTGTTCG+TGG | 0.465707 | 7_1:+62109313 | Msa1028910:CDS |
| GAAGGTGGTGGAAGGCTTTG+TGG | 0.471640 | 7_1:+62110511 | Msa1028910:CDS |
| GTCATTGGGTGTGGAGTTGG+CGG | 0.476265 | 7_1:+62110723 | Msa1028910:CDS |
| GGATTAGTGGTCATTGGGTG+TGG | 0.477676 | 7_1:+62110714 | Msa1028910:CDS |
| AAGGAGGTAGAAGGCAGGGT+TGG | 0.478243 | 7_1:+62110484 | Msa1028910:CDS |
| GTGGTCATTGGGTGTGGAGT+TGG | 0.478540 | 7_1:+62110720 | Msa1028910:CDS |
| TGATCGGATCGGTGTTGAAA+AGG | 0.486280 | 7_1:+62109132 | Msa1028910:CDS |
| GCGCCGCGTCAACCTTGGCT+TGG | 0.491264 | 7_1:-62109075 | None:intergenic |
| CGAGGCTTGGAGGATTCAGC+AGG | 0.496573 | 7_1:-62109298 | None:intergenic |
| ACAACTTCTTCCCATGCAAA+CGG | 0.499045 | 7_1:-62110755 | None:intergenic |
| AACACCAGGGCGAGGCTTGG+AGG | 0.501344 | 7_1:-62109308 | None:intergenic |
| GAAATTGAAGCTATTGTTGG+CGG | 0.503271 | 7_1:+62110781 | Msa1028910:CDS |
| GAATCCTCCAAGCCTCGCCC+TGG | 0.508082 | 7_1:+62109304 | Msa1028910:CDS |
| ACCGATCCGATCAAGCAAAC+CGG | 0.511341 | 7_1:-62109122 | None:intergenic |
| GCGCTGACGAATCGCGGCGG+AGG | 0.512793 | 7_1:+62109094 | Msa1028910:CDS |
| GCAGTGAGGGCACTCCCACT+TGG | 0.515764 | 7_1:-62109164 | None:intergenic |
| CTTGGTGGAAATTGGTGTGT+GGG | 0.515874 | 7_1:+62110542 | Msa1028910:CDS |
| TTGAGACTACCACGAACACC+AGG | 0.527196 | 7_1:-62109322 | None:intergenic |
| GAAGGCAGGGTTGGTAGCGA+AGG | 0.528681 | 7_1:+62110493 | Msa1028910:CDS |
| TACGGTGGTAGCAAAGGTGG+TGG | 0.539412 | 7_1:+62110447 | Msa1028910:intron |
| GGCTTTGTGGTCGAGCAACT+TGG | 0.541820 | 7_1:+62110524 | Msa1028910:CDS |
| GGTGGAGGAAGCCGTTTGCA+TGG | 0.541853 | 7_1:+62110744 | Msa1028910:CDS |
| GATCGGATCGGTGTTGAAAA+GGG | 0.542506 | 7_1:+62109133 | Msa1028910:CDS |
| CAATCATCAATCAAGATGAC+GGG | 0.549212 | 7_1:+62109016 | None:intergenic |
| GGGAGGTGGCTCTTTGAAGG+AGG | 0.552437 | 7_1:+62110468 | Msa1028910:CDS |
| GGCAGGGTTGGTAGCGAAGG+TGG | 0.553131 | 7_1:+62110496 | Msa1028910:CDS |
| AATCGCGGCGGAGGAAAAGC+CGG | 0.554621 | 7_1:+62109103 | Msa1028910:CDS |
| CTTTGAAGGAGGTAGAAGGC+AGG | 0.556760 | 7_1:+62110479 | Msa1028910:CDS |
| GTGGAGGAAGCCGTTTGCAT+GGG | 0.557593 | 7_1:+62110745 | Msa1028910:CDS |
| GTTAGAAGAAAATTGGGAGA+TGG | 0.564335 | 7_1:+62110585 | Msa1028910:CDS |
| TTGGTGGAAATTGGTGTGTG+GGG | 0.565390 | 7_1:+62110543 | Msa1028910:CDS |
| GCCGGTTTGCTTGATCGGAT+CGG | 0.570802 | 7_1:+62109121 | Msa1028910:CDS |
| TTGGTAGCGAAGGTGGTGGA+AGG | 0.571289 | 7_1:+62110503 | Msa1028910:CDS |
| ATGTACGGTGGTAGCAAAGG+TGG | 0.589543 | 7_1:+62110444 | Msa1028910:intron |
| AGGGTTGGTAGCGAAGGTGG+TGG | 0.592225 | 7_1:+62110499 | Msa1028910:CDS |
| TTTGTGGTCGAGCAACTTGG+TGG | 0.596208 | 7_1:+62110527 | Msa1028910:CDS |
| TTGTTGTTAAAGAGGCAAGA+GGG | 0.597259 | 7_1:+62110686 | Msa1028910:intron |
| CTACCACGAACACCAGGGCG+AGG | 0.597449 | 7_1:-62109316 | None:intergenic |
| TTTGAAGGAGGTAGAAGGCA+GGG | 0.604114 | 7_1:+62110480 | Msa1028910:CDS |
| ATTGTTGTTAAAGAGGCAAG+AGG | 0.606638 | 7_1:+62110685 | Msa1028910:intron |
| GTGGTAGCAAAGGTGGTGGG+AGG | 0.613507 | 7_1:+62110451 | Msa1028910:intron |
| ACTTGGTGGAAATTGGTGTG+TGG | 0.626805 | 7_1:+62110541 | Msa1028910:CDS |
| ACGGTGGTAGCAAAGGTGGT+GGG | 0.629493 | 7_1:+62110448 | Msa1028910:intron |
| CGGATCGGTGTTGAAAAGGG+TGG | 0.630433 | 7_1:+62109136 | Msa1028910:CDS |
| TGGTGGAAATTGGTGTGTGG+GGG | 0.639428 | 7_1:+62110544 | Msa1028910:CDS |
| GGCGAAGGAGATCCAAGCCA+AGG | 0.648739 | 7_1:+62109063 | Msa1028910:CDS |
| AGCGAAGCCAAAGAAGCACA+CGG | 0.650014 | 7_1:+62109042 | Msa1028910:CDS |
| GATCCAAGCCAAGGTTGACG+CGG | 0.654184 | 7_1:+62109072 | Msa1028910:CDS |
| AAAAGGGTGGACACGCCAAG+TGG | 0.671036 | 7_1:+62109149 | Msa1028910:CDS |
| AAAGGGTGGACACGCCAAGT+GGG | 0.690189 | 7_1:+62109150 | Msa1028910:CDS |
| TGAGACTACCACGAACACCA+GGG | 0.697182 | 7_1:-62109321 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTGAATAATTTGTCAAA+TGG | + | chr7_1:62109464-62109483 | Msa1028910:intron | 15.0% |
| !!! | TATTGAATAATTTGTCAAAT+GGG | + | chr7_1:62109465-62109484 | Msa1028910:intron | 15.0% |
| !!! | ATGTCTTGTATTAAATTTTA+AGG | + | chr7_1:62109949-62109968 | Msa1028910:intron | 15.0% |
| !!! | TTTATACTAATTAGTTTAGA+AGG | + | chr7_1:62110259-62110278 | Msa1028910:intron | 15.0% |
| !!! | TTATTGAATAATTTGTCAAA+TGG | + | chr7_1:62109464-62109483 | Msa1028910:intron | 15.0% |
| !!! | TATTGAATAATTTGTCAAAT+GGG | + | chr7_1:62109465-62109484 | Msa1028910:intron | 15.0% |
| !!! | ATGTCTTGTATTAAATTTTA+AGG | + | chr7_1:62109949-62109968 | Msa1028910:intron | 15.0% |
| !!! | TTTATACTAATTAGTTTAGA+AGG | + | chr7_1:62110259-62110278 | Msa1028910:intron | 15.0% |
| !!! | AATATCAAAATGATGCATTT+TGG | + | chr7_1:62109505-62109524 | Msa1028910:intron | 20.0% |
| !!! | TAGTTTATTTTTGCTATGTT+TGG | + | chr7_1:62109785-62109804 | Msa1028910:intron | 20.0% |
| !!! | CTTGTATTAAATTTTAAGGT+TGG | + | chr7_1:62109953-62109972 | Msa1028910:intron | 20.0% |
| !!! | TAAATTTTAAGGTTGGTTTT+CGG | + | chr7_1:62109960-62109979 | Msa1028910:intron | 20.0% |
| !! | TATAATCTGAATCTCTATTA+TGG | + | chr7_1:62110361-62110380 | Msa1028910:intron | 20.0% |
| !! | ATTATATATCCAAGAGAAAA+AGG | - | chr7_1:62110426-62110445 | None:intergenic | 20.0% |
| !!! | AATATCAAAATGATGCATTT+TGG | + | chr7_1:62109505-62109524 | Msa1028910:intron | 20.0% |
| !!! | TAGTTTATTTTTGCTATGTT+TGG | + | chr7_1:62109785-62109804 | Msa1028910:intron | 20.0% |
| !!! | CTTGTATTAAATTTTAAGGT+TGG | + | chr7_1:62109953-62109972 | Msa1028910:intron | 20.0% |
| !!! | TAAATTTTAAGGTTGGTTTT+CGG | + | chr7_1:62109960-62109979 | Msa1028910:intron | 20.0% |
| !! | TATAATCTGAATCTCTATTA+TGG | + | chr7_1:62110361-62110380 | Msa1028910:intron | 20.0% |
| !! | ATTATATATCCAAGAGAAAA+AGG | - | chr7_1:62110426-62110445 | None:intergenic | 20.0% |
| !!! | TTTCAACTTGTCTTTTTTAG+AGG | + | chr7_1:62109440-62109459 | Msa1028910:intron | 25.0% |
| ! | GGAACAATATATTACATTCA+AGG | - | chr7_1:62109633-62109652 | None:intergenic | 25.0% |
| ! | AACATATAGTAGTAACTAGT+AGG | - | chr7_1:62109680-62109699 | None:intergenic | 25.0% |
| ! | TCTCTTGGATATATAATGTA+CGG | + | chr7_1:62110429-62110448 | Msa1028910:intron | 25.0% |
| !!! | TTATGGGTTAGAAGAAAATT+GGG | + | chr7_1:62110579-62110598 | Msa1028910:CDS | 25.0% |
| ! | ACAATAACAGAAAACAATCT+AGG | - | chr7_1:62110670-62110689 | None:intergenic | 25.0% |
| !! | TTCTGTTATTGTTGTTAAAG+AGG | + | chr7_1:62110678-62110697 | Msa1028910:intron | 25.0% |
| !!! | TTTCAACTTGTCTTTTTTAG+AGG | + | chr7_1:62109440-62109459 | Msa1028910:intron | 25.0% |
| ! | GGAACAATATATTACATTCA+AGG | - | chr7_1:62109633-62109652 | None:intergenic | 25.0% |
| ! | AACATATAGTAGTAACTAGT+AGG | - | chr7_1:62109680-62109699 | None:intergenic | 25.0% |
| ! | TCTCTTGGATATATAATGTA+CGG | + | chr7_1:62110429-62110448 | Msa1028910:intron | 25.0% |
| !!! | TTATGGGTTAGAAGAAAATT+GGG | + | chr7_1:62110579-62110598 | Msa1028910:CDS | 25.0% |
| ! | ACAATAACAGAAAACAATCT+AGG | - | chr7_1:62110670-62110689 | None:intergenic | 25.0% |
| !! | TTCTGTTATTGTTGTTAAAG+AGG | + | chr7_1:62110678-62110697 | Msa1028910:intron | 25.0% |
| TAGTAAAAGCCATGAATGAA+GGG | - | chr7_1:62109394-62109413 | None:intergenic | 30.0% | |
| ATAGTAAAAGCCATGAATGA+AGG | - | chr7_1:62109395-62109414 | None:intergenic | 30.0% | |
| !! | TACATTCAAGGCTTTAAGAA+GGG | - | chr7_1:62109621-62109640 | None:intergenic | 30.0% |
| !! | TTACATTCAAGGCTTTAAGA+AGG | - | chr7_1:62109622-62109641 | None:intergenic | 30.0% |
| GTAATATATTGTTCCCTTGA+TGG | + | chr7_1:62109638-62109657 | Msa1028910:intron | 30.0% | |
| ATCATATTAACTGCCATCAA+GGG | - | chr7_1:62109654-62109673 | None:intergenic | 30.0% | |
| GATTGTCAGTATTAAATCCA+CGG | + | chr7_1:62109897-62109916 | Msa1028910:intron | 30.0% | |
| ! | GAGGTTTGGTAAAATTTCTA+TGG | + | chr7_1:62109924-62109943 | Msa1028910:intron | 30.0% |
| TAAGTTCAGTAGTTAGGTTA+TGG | + | chr7_1:62110047-62110066 | Msa1028910:intron | 30.0% | |
| AAGTTCAGTAGTTAGGTTAT+GGG | + | chr7_1:62110048-62110067 | Msa1028910:intron | 30.0% | |
| CATCATAAAACCGACAAATT+TGG | - | chr7_1:62110202-62110221 | None:intergenic | 30.0% | |
| AGTGATACAAACTAGACATA+CGG | + | chr7_1:62110302-62110321 | Msa1028910:intron | 30.0% | |
| ! | TGATGATATGTTTTACATGC+TGG | + | chr7_1:62110332-62110351 | Msa1028910:intron | 30.0% |
| !! | CTTATGGGTTAGAAGAAAAT+TGG | + | chr7_1:62110578-62110597 | Msa1028910:CDS | 30.0% |
| TAGTAAAAGCCATGAATGAA+GGG | - | chr7_1:62109394-62109413 | None:intergenic | 30.0% | |
| ATAGTAAAAGCCATGAATGA+AGG | - | chr7_1:62109395-62109414 | None:intergenic | 30.0% | |
| !! | TACATTCAAGGCTTTAAGAA+GGG | - | chr7_1:62109621-62109640 | None:intergenic | 30.0% |
| !! | TTACATTCAAGGCTTTAAGA+AGG | - | chr7_1:62109622-62109641 | None:intergenic | 30.0% |
| GTAATATATTGTTCCCTTGA+TGG | + | chr7_1:62109638-62109657 | Msa1028910:intron | 30.0% | |
| ATCATATTAACTGCCATCAA+GGG | - | chr7_1:62109654-62109673 | None:intergenic | 30.0% | |
| GATTGTCAGTATTAAATCCA+CGG | + | chr7_1:62109897-62109916 | Msa1028910:intron | 30.0% | |
| ! | GAGGTTTGGTAAAATTTCTA+TGG | + | chr7_1:62109924-62109943 | Msa1028910:intron | 30.0% |
| TAAGTTCAGTAGTTAGGTTA+TGG | + | chr7_1:62110047-62110066 | Msa1028910:intron | 30.0% | |
| AAGTTCAGTAGTTAGGTTAT+GGG | + | chr7_1:62110048-62110067 | Msa1028910:intron | 30.0% | |
| CATCATAAAACCGACAAATT+TGG | - | chr7_1:62110202-62110221 | None:intergenic | 30.0% | |
| AGTGATACAAACTAGACATA+CGG | + | chr7_1:62110302-62110321 | Msa1028910:intron | 30.0% | |
| ! | TGATGATATGTTTTACATGC+TGG | + | chr7_1:62110332-62110351 | Msa1028910:intron | 30.0% |
| !! | CTTATGGGTTAGAAGAAAAT+TGG | + | chr7_1:62110578-62110597 | Msa1028910:CDS | 30.0% |
| ! | CAAGCTTTTCTTCCTCAAAA+GGG | - | chr7_1:62109252-62109271 | None:intergenic | 35.0% |
| ! | ACAAGCTTTTCTTCCTCAAA+AGG | - | chr7_1:62109253-62109272 | None:intergenic | 35.0% |
| TTTAATCGACCCTTCATTCA+TGG | + | chr7_1:62109382-62109401 | Msa1028910:intron | 35.0% | |
| TTATGATGCTGTGTATGAAG+TGG | + | chr7_1:62109540-62109559 | Msa1028910:intron | 35.0% | |
| ! | TGCTGAAAAGGGTTTTTGAT+GGG | + | chr7_1:62109563-62109582 | Msa1028910:intron | 35.0% |
| ! | AAAGGGTTTTTGATGGGAAT+TGG | + | chr7_1:62109569-62109588 | Msa1028910:intron | 35.0% |
| ! | CAGTTGTGCTGTTATTGATT+TGG | + | chr7_1:62109595-62109614 | Msa1028910:intron | 35.0% |
| CATCATATTAACTGCCATCA+AGG | - | chr7_1:62109655-62109674 | None:intergenic | 35.0% | |
| ! | CTTGATGGCAGTTAATATGA+TGG | + | chr7_1:62109653-62109672 | Msa1028910:intron | 35.0% |
| TCTGTCCTTTGATCATAAAC+TGG | + | chr7_1:62109747-62109766 | Msa1028910:intron | 35.0% | |
| TCAAGCCAGTTTATGATCAA+AGG | - | chr7_1:62109755-62109774 | None:intergenic | 35.0% | |
| ACTCACATAAAAACTTGCCT+CGG | - | chr7_1:62109843-62109862 | None:intergenic | 35.0% | |
| ! | GCAAGTTTTTATGTGAGTTC+AGG | + | chr7_1:62109845-62109864 | Msa1028910:intron | 35.0% |
| AGTTCAGTAGTTAGGTTATG+GGG | + | chr7_1:62110049-62110068 | Msa1028910:intron | 35.0% | |
| !! | AATTTGGATTGTGGCTTTGT+GGG | - | chr7_1:62110186-62110205 | None:intergenic | 35.0% |
| ! | AAATTTGGATTGTGGCTTTG+TGG | - | chr7_1:62110187-62110206 | None:intergenic | 35.0% |
| AAGCCACAATCCAAATTTGT+CGG | + | chr7_1:62110189-62110208 | Msa1028910:intron | 35.0% | |
| AAACCGACAAATTTGGATTG+TGG | - | chr7_1:62110195-62110214 | None:intergenic | 35.0% | |
| AAGGATAACCAAAAGCTACT+GGG | + | chr7_1:62110278-62110297 | Msa1028910:intron | 35.0% | |
| GGATCACTCAAAATGCTTAA+TGG | - | chr7_1:62110397-62110416 | None:intergenic | 35.0% | |
| CTTGGATATATAATGTACGG+TGG | + | chr7_1:62110432-62110451 | Msa1028910:intron | 35.0% | |
| GTTAGAAGAAAATTGGGAGA+TGG | + | chr7_1:62110585-62110604 | Msa1028910:CDS | 35.0% | |
| !! | GATGGACAAAGTGTTCATTT+TGG | + | chr7_1:62110603-62110622 | Msa1028910:intron | 35.0% |
| ! | ATTGTTGTTAAAGAGGCAAG+AGG | + | chr7_1:62110685-62110704 | Msa1028910:intron | 35.0% |
| ! | TTGTTGTTAAAGAGGCAAGA+GGG | + | chr7_1:62110686-62110705 | Msa1028910:intron | 35.0% |
| !! | TAGTTGGATTAGTGGTCATT+GGG | + | chr7_1:62110709-62110728 | Msa1028910:CDS | 35.0% |
| CGAGAAATTGAAGCTATTGT+TGG | + | chr7_1:62110778-62110797 | Msa1028910:CDS | 35.0% | |
| GAAATTGAAGCTATTGTTGG+CGG | + | chr7_1:62110781-62110800 | Msa1028910:CDS | 35.0% | |
| ! | CAAGCTTTTCTTCCTCAAAA+GGG | - | chr7_1:62109252-62109271 | None:intergenic | 35.0% |
| ! | ACAAGCTTTTCTTCCTCAAA+AGG | - | chr7_1:62109253-62109272 | None:intergenic | 35.0% |
| TTTAATCGACCCTTCATTCA+TGG | + | chr7_1:62109382-62109401 | Msa1028910:intron | 35.0% | |
| TTATGATGCTGTGTATGAAG+TGG | + | chr7_1:62109540-62109559 | Msa1028910:intron | 35.0% | |
| ! | TGCTGAAAAGGGTTTTTGAT+GGG | + | chr7_1:62109563-62109582 | Msa1028910:intron | 35.0% |
| ! | AAAGGGTTTTTGATGGGAAT+TGG | + | chr7_1:62109569-62109588 | Msa1028910:intron | 35.0% |
| ! | CAGTTGTGCTGTTATTGATT+TGG | + | chr7_1:62109595-62109614 | Msa1028910:intron | 35.0% |
| CATCATATTAACTGCCATCA+AGG | - | chr7_1:62109655-62109674 | None:intergenic | 35.0% | |
| ! | CTTGATGGCAGTTAATATGA+TGG | + | chr7_1:62109653-62109672 | Msa1028910:intron | 35.0% |
| TCTGTCCTTTGATCATAAAC+TGG | + | chr7_1:62109747-62109766 | Msa1028910:intron | 35.0% | |
| TCAAGCCAGTTTATGATCAA+AGG | - | chr7_1:62109755-62109774 | None:intergenic | 35.0% | |
| ACTCACATAAAAACTTGCCT+CGG | - | chr7_1:62109843-62109862 | None:intergenic | 35.0% | |
| ! | GCAAGTTTTTATGTGAGTTC+AGG | + | chr7_1:62109845-62109864 | Msa1028910:intron | 35.0% |
| AGTTCAGTAGTTAGGTTATG+GGG | + | chr7_1:62110049-62110068 | Msa1028910:intron | 35.0% | |
| !! | AATTTGGATTGTGGCTTTGT+GGG | - | chr7_1:62110186-62110205 | None:intergenic | 35.0% |
| ! | AAATTTGGATTGTGGCTTTG+TGG | - | chr7_1:62110187-62110206 | None:intergenic | 35.0% |
| AAGCCACAATCCAAATTTGT+CGG | + | chr7_1:62110189-62110208 | Msa1028910:intron | 35.0% | |
| AAACCGACAAATTTGGATTG+TGG | - | chr7_1:62110195-62110214 | None:intergenic | 35.0% | |
| AAGGATAACCAAAAGCTACT+GGG | + | chr7_1:62110278-62110297 | Msa1028910:intron | 35.0% | |
| GGATCACTCAAAATGCTTAA+TGG | - | chr7_1:62110397-62110416 | None:intergenic | 35.0% | |
| CTTGGATATATAATGTACGG+TGG | + | chr7_1:62110432-62110451 | Msa1028910:intron | 35.0% | |
| GTTAGAAGAAAATTGGGAGA+TGG | + | chr7_1:62110585-62110604 | Msa1028910:CDS | 35.0% | |
| !! | GATGGACAAAGTGTTCATTT+TGG | + | chr7_1:62110603-62110622 | Msa1028910:intron | 35.0% |
| ! | ATTGTTGTTAAAGAGGCAAG+AGG | + | chr7_1:62110685-62110704 | Msa1028910:intron | 35.0% |
| ! | TTGTTGTTAAAGAGGCAAGA+GGG | + | chr7_1:62110686-62110705 | Msa1028910:intron | 35.0% |
| !! | TAGTTGGATTAGTGGTCATT+GGG | + | chr7_1:62110709-62110728 | Msa1028910:CDS | 35.0% |
| CGAGAAATTGAAGCTATTGT+TGG | + | chr7_1:62110778-62110797 | Msa1028910:CDS | 35.0% | |
| GAAATTGAAGCTATTGTTGG+CGG | + | chr7_1:62110781-62110800 | Msa1028910:CDS | 35.0% | |
| !! | ATCTGCATCGATTTCACATC+AGG | - | chr7_1:62109202-62109221 | None:intergenic | 40.0% |
| TCTTCCTCAAAAGGGATCTT+TGG | - | chr7_1:62109244-62109263 | None:intergenic | 40.0% | |
| ! | TGTATGAAGTGGTGCTGAAA+AGG | + | chr7_1:62109551-62109570 | Msa1028910:intron | 40.0% |
| ! | GTATGAAGTGGTGCTGAAAA+GGG | + | chr7_1:62109552-62109571 | Msa1028910:intron | 40.0% |
| ! | GTGCTGAAAAGGGTTTTTGA+TGG | + | chr7_1:62109562-62109581 | Msa1028910:intron | 40.0% |
| !! | CATAAACTGGCTTGAGTTGT+TGG | + | chr7_1:62109760-62109779 | Msa1028910:intron | 40.0% |
| ! | ATGCCAAACTAACTTGTGCT+CGG | + | chr7_1:62109873-62109892 | Msa1028910:intron | 40.0% |
| GTATTAAATCCACGGCAATG+AGG | + | chr7_1:62109905-62109924 | Msa1028910:intron | 40.0% | |
| !!! | TTTTAAGGTTGGTTTTCGGC+TGG | + | chr7_1:62109964-62109983 | Msa1028910:intron | 40.0% |
| !!! | TTTAAGGTTGGTTTTCGGCT+GGG | + | chr7_1:62109965-62109984 | Msa1028910:intron | 40.0% |
| GGTGGTTAAGTTCAGTAGTT+AGG | + | chr7_1:62110041-62110060 | Msa1028910:intron | 40.0% | |
| GTTCAGTAGTCCGAATGTAT+CGG | + | chr7_1:62110120-62110139 | Msa1028910:intron | 40.0% | |
| ACACTGGTAACCGATACATT+CGG | - | chr7_1:62110133-62110152 | None:intergenic | 40.0% | |
| ! | TGCAGCTTTTGTTCTGCATT+TGG | + | chr7_1:62110234-62110253 | Msa1028910:intron | 40.0% |
| GAAGGATAACCAAAAGCTAC+TGG | + | chr7_1:62110277-62110296 | Msa1028910:intron | 40.0% | |
| ! | TCCTCTGTTCCTTTTTCTCT+TGG | + | chr7_1:62110414-62110433 | Msa1028910:intron | 40.0% |
| TCCAAGAGAAAAAGGAACAG+AGG | - | chr7_1:62110418-62110437 | None:intergenic | 40.0% | |
| ATAATGTACGGTGGTAGCAA+AGG | + | chr7_1:62110441-62110460 | Msa1028910:intron | 40.0% | |
| !! | GTAGTTGGATTAGTGGTCAT+TGG | + | chr7_1:62110708-62110727 | Msa1028910:CDS | 40.0% |
| ACAACTTCTTCCCATGCAAA+CGG | - | chr7_1:62110758-62110777 | None:intergenic | 40.0% | |
| !! | ATCTGCATCGATTTCACATC+AGG | - | chr7_1:62109202-62109221 | None:intergenic | 40.0% |
| TCTTCCTCAAAAGGGATCTT+TGG | - | chr7_1:62109244-62109263 | None:intergenic | 40.0% | |
| ! | TGTATGAAGTGGTGCTGAAA+AGG | + | chr7_1:62109551-62109570 | Msa1028910:intron | 40.0% |
| ! | GTATGAAGTGGTGCTGAAAA+GGG | + | chr7_1:62109552-62109571 | Msa1028910:intron | 40.0% |
| ! | GTGCTGAAAAGGGTTTTTGA+TGG | + | chr7_1:62109562-62109581 | Msa1028910:intron | 40.0% |
| !! | CATAAACTGGCTTGAGTTGT+TGG | + | chr7_1:62109760-62109779 | Msa1028910:intron | 40.0% |
| ! | ATGCCAAACTAACTTGTGCT+CGG | + | chr7_1:62109873-62109892 | Msa1028910:intron | 40.0% |
| GTATTAAATCCACGGCAATG+AGG | + | chr7_1:62109905-62109924 | Msa1028910:intron | 40.0% | |
| !!! | TTTTAAGGTTGGTTTTCGGC+TGG | + | chr7_1:62109964-62109983 | Msa1028910:intron | 40.0% |
| !!! | TTTAAGGTTGGTTTTCGGCT+GGG | + | chr7_1:62109965-62109984 | Msa1028910:intron | 40.0% |
| GGTGGTTAAGTTCAGTAGTT+AGG | + | chr7_1:62110041-62110060 | Msa1028910:intron | 40.0% | |
| GTTCAGTAGTCCGAATGTAT+CGG | + | chr7_1:62110120-62110139 | Msa1028910:intron | 40.0% | |
| ACACTGGTAACCGATACATT+CGG | - | chr7_1:62110133-62110152 | None:intergenic | 40.0% | |
| ! | TGCAGCTTTTGTTCTGCATT+TGG | + | chr7_1:62110234-62110253 | Msa1028910:intron | 40.0% |
| GAAGGATAACCAAAAGCTAC+TGG | + | chr7_1:62110277-62110296 | Msa1028910:intron | 40.0% | |
| ! | TCCTCTGTTCCTTTTTCTCT+TGG | + | chr7_1:62110414-62110433 | Msa1028910:intron | 40.0% |
| TCCAAGAGAAAAAGGAACAG+AGG | - | chr7_1:62110418-62110437 | None:intergenic | 40.0% | |
| ATAATGTACGGTGGTAGCAA+AGG | + | chr7_1:62110441-62110460 | Msa1028910:intron | 40.0% | |
| !! | GTAGTTGGATTAGTGGTCAT+TGG | + | chr7_1:62110708-62110727 | Msa1028910:CDS | 40.0% |
| ACAACTTCTTCCCATGCAAA+CGG | - | chr7_1:62110758-62110777 | None:intergenic | 40.0% | |
| !! | GAAAAGCCGGTTTGCTTGAT+CGG | + | chr7_1:62109116-62109135 | Msa1028910:CDS | 45.0% |
| !! | TGATCGGATCGGTGTTGAAA+AGG | + | chr7_1:62109132-62109151 | Msa1028910:CDS | 45.0% |
| !! | GATCGGATCGGTGTTGAAAA+GGG | + | chr7_1:62109133-62109152 | Msa1028910:CDS | 45.0% |
| ! | GCATCCAAAGATCCCTTTTG+AGG | + | chr7_1:62109237-62109256 | Msa1028910:CDS | 45.0% |
| TCACCGAGCACAAGTTAGTT+TGG | - | chr7_1:62109879-62109898 | None:intergenic | 45.0% | |
| AAATCCACGGCAATGAGGTT+TGG | + | chr7_1:62109910-62109929 | Msa1028910:intron | 45.0% | |
| TTTACCAAACCTCATTGCCG+TGG | - | chr7_1:62109917-62109936 | None:intergenic | 45.0% | |
| CTACTGAACTTAACCACCAC+CGG | - | chr7_1:62110039-62110058 | None:intergenic | 45.0% | |
| AGCTTTCCACGTAACCTTAG+AGG | + | chr7_1:62110153-62110172 | Msa1028910:intron | 45.0% | |
| !! | CACAATCCTCTAAGGTTACG+TGG | - | chr7_1:62110162-62110181 | None:intergenic | 45.0% |
| TTGTGGGTCACAATCCTCTA+AGG | - | chr7_1:62110170-62110189 | None:intergenic | 45.0% | |
| ! | TATCACTGCCCAGTAGCTTT+TGG | - | chr7_1:62110289-62110308 | None:intergenic | 45.0% |
| TTTGAAGGAGGTAGAAGGCA+GGG | + | chr7_1:62110480-62110499 | Msa1028910:CDS | 45.0% | |
| ! | TCGAGCAACTTGGTGGAAAT+TGG | + | chr7_1:62110534-62110553 | Msa1028910:CDS | 45.0% |
| ! | ACTTGGTGGAAATTGGTGTG+TGG | + | chr7_1:62110541-62110560 | Msa1028910:CDS | 45.0% |
| CTTGGTGGAAATTGGTGTGT+GGG | + | chr7_1:62110542-62110561 | Msa1028910:CDS | 45.0% | |
| TTGGTGGAAATTGGTGTGTG+GGG | + | chr7_1:62110543-62110562 | Msa1028910:CDS | 45.0% | |
| GGGGACGTGATACTTCTTAT+GGG | + | chr7_1:62110563-62110582 | Msa1028910:CDS | 45.0% | |
| CAGTGAGTTGTAGATTGCCT+TGG | + | chr7_1:62110632-62110651 | Msa1028910:intron | 45.0% | |
| GAGTTGTAGATTGCCTTGGA+AGG | + | chr7_1:62110636-62110655 | Msa1028910:intron | 45.0% | |
| CTAGGAAAGACAACCTTCCA+AGG | - | chr7_1:62110652-62110671 | None:intergenic | 45.0% | |
| TAAAGAGGCAAGAGGGTAGT+TGG | + | chr7_1:62110693-62110712 | Msa1028910:intron | 45.0% | |
| ! | CAAGAGGGTAGTTGGATTAG+TGG | + | chr7_1:62110701-62110720 | Msa1028910:CDS | 45.0% |
| AAGCTATTGTTGGCGGTCTT+GGG | + | chr7_1:62110788-62110807 | Msa1028910:CDS | 45.0% | |
| !! | GAAAAGCCGGTTTGCTTGAT+CGG | + | chr7_1:62109116-62109135 | Msa1028910:CDS | 45.0% |
| !! | TGATCGGATCGGTGTTGAAA+AGG | + | chr7_1:62109132-62109151 | Msa1028910:CDS | 45.0% |
| !! | GATCGGATCGGTGTTGAAAA+GGG | + | chr7_1:62109133-62109152 | Msa1028910:CDS | 45.0% |
| ! | GCATCCAAAGATCCCTTTTG+AGG | + | chr7_1:62109237-62109256 | Msa1028910:CDS | 45.0% |
| TCACCGAGCACAAGTTAGTT+TGG | - | chr7_1:62109879-62109898 | None:intergenic | 45.0% | |
| AAATCCACGGCAATGAGGTT+TGG | + | chr7_1:62109910-62109929 | Msa1028910:intron | 45.0% | |
| TTTACCAAACCTCATTGCCG+TGG | - | chr7_1:62109917-62109936 | None:intergenic | 45.0% | |
| CTACTGAACTTAACCACCAC+CGG | - | chr7_1:62110039-62110058 | None:intergenic | 45.0% | |
| AGCTTTCCACGTAACCTTAG+AGG | + | chr7_1:62110153-62110172 | Msa1028910:intron | 45.0% | |
| !! | CACAATCCTCTAAGGTTACG+TGG | - | chr7_1:62110162-62110181 | None:intergenic | 45.0% |
| TTGTGGGTCACAATCCTCTA+AGG | - | chr7_1:62110170-62110189 | None:intergenic | 45.0% | |
| ! | TATCACTGCCCAGTAGCTTT+TGG | - | chr7_1:62110289-62110308 | None:intergenic | 45.0% |
| TTTGAAGGAGGTAGAAGGCA+GGG | + | chr7_1:62110480-62110499 | Msa1028910:CDS | 45.0% | |
| ! | TCGAGCAACTTGGTGGAAAT+TGG | + | chr7_1:62110534-62110553 | Msa1028910:CDS | 45.0% |
| ! | ACTTGGTGGAAATTGGTGTG+TGG | + | chr7_1:62110541-62110560 | Msa1028910:CDS | 45.0% |
| CTTGGTGGAAATTGGTGTGT+GGG | + | chr7_1:62110542-62110561 | Msa1028910:CDS | 45.0% | |
| TTGGTGGAAATTGGTGTGTG+GGG | + | chr7_1:62110543-62110562 | Msa1028910:CDS | 45.0% | |
| GGGGACGTGATACTTCTTAT+GGG | + | chr7_1:62110563-62110582 | Msa1028910:CDS | 45.0% | |
| CAGTGAGTTGTAGATTGCCT+TGG | + | chr7_1:62110632-62110651 | Msa1028910:intron | 45.0% | |
| GAGTTGTAGATTGCCTTGGA+AGG | + | chr7_1:62110636-62110655 | Msa1028910:intron | 45.0% | |
| CTAGGAAAGACAACCTTCCA+AGG | - | chr7_1:62110652-62110671 | None:intergenic | 45.0% | |
| TAAAGAGGCAAGAGGGTAGT+TGG | + | chr7_1:62110693-62110712 | Msa1028910:intron | 45.0% | |
| ! | CAAGAGGGTAGTTGGATTAG+TGG | + | chr7_1:62110701-62110720 | Msa1028910:CDS | 45.0% |
| AAGCTATTGTTGGCGGTCTT+GGG | + | chr7_1:62110788-62110807 | Msa1028910:CDS | 45.0% | |
| ! | AGCGAAGCCAAAGAAGCACA+CGG | + | chr7_1:62109042-62109061 | Msa1028910:CDS | 50.0% |
| ACCGATCCGATCAAGCAAAC+CGG | - | chr7_1:62109125-62109144 | None:intergenic | 50.0% | |
| ! | GCGCTGTGATTTTGCAGTGA+GGG | - | chr7_1:62109180-62109199 | None:intergenic | 50.0% |
| TGAGACTACCACGAACACCA+GGG | - | chr7_1:62109324-62109343 | None:intergenic | 50.0% | |
| TTGAGACTACCACGAACACC+AGG | - | chr7_1:62109325-62109344 | None:intergenic | 50.0% | |
| TTTCGGCTGGGCTTAGGTTA+TGG | + | chr7_1:62109977-62109996 | Msa1028910:intron | 50.0% | |
| TTCGGCTGGGCTTAGGTTAT+GGG | + | chr7_1:62109978-62109997 | Msa1028910:intron | 50.0% | |
| GTTGACTGCGCAGCTACAAA+AGG | - | chr7_1:62110012-62110031 | None:intergenic | 50.0% | |
| ! | GAACTTAACCACCACCGGTT+TGG | - | chr7_1:62110034-62110053 | None:intergenic | 50.0% |
| GTTGACTGCGCAGCTACAAA+AGG | - | chr7_1:62110012-62110031 | None:intergenic | 50.0% | |
| CTACTGAACTTAACCGCCAC+CGG | - | chr7_1:62110109-62110128 | None:intergenic | 50.0% | |
| GGTTACGTGGAAAGCTACAC+TGG | - | chr7_1:62110149-62110168 | None:intergenic | 50.0% | |
| ATGTACGGTGGTAGCAAAGG+TGG | + | chr7_1:62110444-62110463 | Msa1028910:intron | 50.0% | |
| ! | GGCTCTTTGAAGGAGGTAGA+AGG | + | chr7_1:62110475-62110494 | Msa1028910:CDS | 50.0% |
| ! | CTTTGAAGGAGGTAGAAGGC+AGG | + | chr7_1:62110479-62110498 | Msa1028910:CDS | 50.0% |
| TTTGTGGTCGAGCAACTTGG+TGG | + | chr7_1:62110527-62110546 | Msa1028910:CDS | 50.0% | |
| TGGTGGAAATTGGTGTGTGG+GGG | + | chr7_1:62110544-62110563 | Msa1028910:CDS | 50.0% | |
| GGGGGACGTGATACTTCTTA+TGG | + | chr7_1:62110562-62110581 | Msa1028910:CDS | 50.0% | |
| ! | GGATTAGTGGTCATTGGGTG+TGG | + | chr7_1:62110714-62110733 | Msa1028910:CDS | 50.0% |
| GAAGCTATTGTTGGCGGTCT+TGG | + | chr7_1:62110787-62110806 | Msa1028910:CDS | 50.0% | |
| ! | AGCGAAGCCAAAGAAGCACA+CGG | + | chr7_1:62109042-62109061 | Msa1028910:CDS | 50.0% |
| ACCGATCCGATCAAGCAAAC+CGG | - | chr7_1:62109125-62109144 | None:intergenic | 50.0% | |
| ! | GCGCTGTGATTTTGCAGTGA+GGG | - | chr7_1:62109180-62109199 | None:intergenic | 50.0% |
| TGAGACTACCACGAACACCA+GGG | - | chr7_1:62109324-62109343 | None:intergenic | 50.0% | |
| TTGAGACTACCACGAACACC+AGG | - | chr7_1:62109325-62109344 | None:intergenic | 50.0% | |
| TTTCGGCTGGGCTTAGGTTA+TGG | + | chr7_1:62109977-62109996 | Msa1028910:intron | 50.0% | |
| TTCGGCTGGGCTTAGGTTAT+GGG | + | chr7_1:62109978-62109997 | Msa1028910:intron | 50.0% | |
| GTTGACTGCGCAGCTACAAA+AGG | - | chr7_1:62110012-62110031 | None:intergenic | 50.0% | |
| ! | GAACTTAACCACCACCGGTT+TGG | - | chr7_1:62110034-62110053 | None:intergenic | 50.0% |
| GTTGACTGCGCAGCTACAAA+AGG | - | chr7_1:62110012-62110031 | None:intergenic | 50.0% | |
| CTACTGAACTTAACCGCCAC+CGG | - | chr7_1:62110109-62110128 | None:intergenic | 50.0% | |
| GGTTACGTGGAAAGCTACAC+TGG | - | chr7_1:62110149-62110168 | None:intergenic | 50.0% | |
| ATGTACGGTGGTAGCAAAGG+TGG | + | chr7_1:62110444-62110463 | Msa1028910:intron | 50.0% | |
| ! | GGCTCTTTGAAGGAGGTAGA+AGG | + | chr7_1:62110475-62110494 | Msa1028910:CDS | 50.0% |
| ! | CTTTGAAGGAGGTAGAAGGC+AGG | + | chr7_1:62110479-62110498 | Msa1028910:CDS | 50.0% |
| TTTGTGGTCGAGCAACTTGG+TGG | + | chr7_1:62110527-62110546 | Msa1028910:CDS | 50.0% | |
| TGGTGGAAATTGGTGTGTGG+GGG | + | chr7_1:62110544-62110563 | Msa1028910:CDS | 50.0% | |
| GGGGGACGTGATACTTCTTA+TGG | + | chr7_1:62110562-62110581 | Msa1028910:CDS | 50.0% | |
| ! | GGATTAGTGGTCATTGGGTG+TGG | + | chr7_1:62110714-62110733 | Msa1028910:CDS | 50.0% |
| GAAGCTATTGTTGGCGGTCT+TGG | + | chr7_1:62110787-62110806 | Msa1028910:CDS | 50.0% | |
| TCCTTCGCCGTGTGCTTCTT+TGG | - | chr7_1:62109052-62109071 | None:intergenic | 55.0% | |
| GATCCAAGCCAAGGTTGACG+CGG | + | chr7_1:62109072-62109091 | Msa1028910:CDS | 55.0% | |
| !! | GCCGGTTTGCTTGATCGGAT+CGG | + | chr7_1:62109121-62109140 | Msa1028910:CDS | 55.0% |
| !! | CGGATCGGTGTTGAAAAGGG+TGG | + | chr7_1:62109136-62109155 | Msa1028910:CDS | 55.0% |
| AAAAGGGTGGACACGCCAAG+TGG | + | chr7_1:62109149-62109168 | Msa1028910:CDS | 55.0% | |
| AAAGGGTGGACACGCCAAGT+GGG | + | chr7_1:62109150-62109169 | Msa1028910:CDS | 55.0% | |
| ! | GGCGCTGTGATTTTGCAGTG+AGG | - | chr7_1:62109181-62109200 | None:intergenic | 55.0% |
| TCCGCGTTAGCTCAAAACCG+AGG | + | chr7_1:62109823-62109842 | Msa1028910:intron | 55.0% | |
| !!! | GCCTCGGTTTTGAGCTAACG+CGG | - | chr7_1:62109827-62109846 | None:intergenic | 55.0% |
| !!! | GTTGGTTTTCGGCTGGGCTT+AGG | + | chr7_1:62109971-62109990 | Msa1028910:intron | 55.0% |
| TCGGCTGGGCTTAGGTTATG+GGG | + | chr7_1:62109979-62109998 | Msa1028910:intron | 55.0% | |
| AGCTGCGCAGTCAACCAAAC+CGG | + | chr7_1:62110017-62110036 | Msa1028910:intron | 55.0% | |
| AGCTGCGCAGTCAACCAAAC+CGG | + | chr7_1:62110017-62110036 | Msa1028910:intron | 55.0% | |
| ! | GAACTTAACCGCCACCGGTT+TGG | - | chr7_1:62110104-62110123 | None:intergenic | 55.0% |
| TACGGTGGTAGCAAAGGTGG+TGG | + | chr7_1:62110447-62110466 | Msa1028910:intron | 55.0% | |
| ACGGTGGTAGCAAAGGTGGT+GGG | + | chr7_1:62110448-62110467 | Msa1028910:intron | 55.0% | |
| AAGGAGGTAGAAGGCAGGGT+TGG | + | chr7_1:62110484-62110503 | Msa1028910:CDS | 55.0% | |
| !! | TTGGTAGCGAAGGTGGTGGA+AGG | + | chr7_1:62110503-62110522 | Msa1028910:CDS | 55.0% |
| !! | GAAGGTGGTGGAAGGCTTTG+TGG | + | chr7_1:62110511-62110530 | Msa1028910:CDS | 55.0% |
| ! | GGCTTTGTGGTCGAGCAACT+TGG | + | chr7_1:62110524-62110543 | Msa1028910:CDS | 55.0% |
| GTGGTCATTGGGTGTGGAGT+TGG | + | chr7_1:62110720-62110739 | Msa1028910:CDS | 55.0% | |
| GTCATTGGGTGTGGAGTTGG+CGG | + | chr7_1:62110723-62110742 | Msa1028910:CDS | 55.0% | |
| GTGGAGGAAGCCGTTTGCAT+GGG | + | chr7_1:62110745-62110764 | Msa1028910:CDS | 55.0% | |
| TCCTTCGCCGTGTGCTTCTT+TGG | - | chr7_1:62109052-62109071 | None:intergenic | 55.0% | |
| GATCCAAGCCAAGGTTGACG+CGG | + | chr7_1:62109072-62109091 | Msa1028910:CDS | 55.0% | |
| !! | GCCGGTTTGCTTGATCGGAT+CGG | + | chr7_1:62109121-62109140 | Msa1028910:CDS | 55.0% |
| !! | CGGATCGGTGTTGAAAAGGG+TGG | + | chr7_1:62109136-62109155 | Msa1028910:CDS | 55.0% |
| AAAAGGGTGGACACGCCAAG+TGG | + | chr7_1:62109149-62109168 | Msa1028910:CDS | 55.0% | |
| AAAGGGTGGACACGCCAAGT+GGG | + | chr7_1:62109150-62109169 | Msa1028910:CDS | 55.0% | |
| ! | GGCGCTGTGATTTTGCAGTG+AGG | - | chr7_1:62109181-62109200 | None:intergenic | 55.0% |
| TCCGCGTTAGCTCAAAACCG+AGG | + | chr7_1:62109823-62109842 | Msa1028910:intron | 55.0% | |
| !!! | GCCTCGGTTTTGAGCTAACG+CGG | - | chr7_1:62109827-62109846 | None:intergenic | 55.0% |
| !!! | GTTGGTTTTCGGCTGGGCTT+AGG | + | chr7_1:62109971-62109990 | Msa1028910:intron | 55.0% |
| TCGGCTGGGCTTAGGTTATG+GGG | + | chr7_1:62109979-62109998 | Msa1028910:intron | 55.0% | |
| AGCTGCGCAGTCAACCAAAC+CGG | + | chr7_1:62110017-62110036 | Msa1028910:intron | 55.0% | |
| AGCTGCGCAGTCAACCAAAC+CGG | + | chr7_1:62110017-62110036 | Msa1028910:intron | 55.0% | |
| ! | GAACTTAACCGCCACCGGTT+TGG | - | chr7_1:62110104-62110123 | None:intergenic | 55.0% |
| TACGGTGGTAGCAAAGGTGG+TGG | + | chr7_1:62110447-62110466 | Msa1028910:intron | 55.0% | |
| ACGGTGGTAGCAAAGGTGGT+GGG | + | chr7_1:62110448-62110467 | Msa1028910:intron | 55.0% | |
| AAGGAGGTAGAAGGCAGGGT+TGG | + | chr7_1:62110484-62110503 | Msa1028910:CDS | 55.0% | |
| !! | TTGGTAGCGAAGGTGGTGGA+AGG | + | chr7_1:62110503-62110522 | Msa1028910:CDS | 55.0% |
| !! | GAAGGTGGTGGAAGGCTTTG+TGG | + | chr7_1:62110511-62110530 | Msa1028910:CDS | 55.0% |
| ! | GGCTTTGTGGTCGAGCAACT+TGG | + | chr7_1:62110524-62110543 | Msa1028910:CDS | 55.0% |
| GTGGTCATTGGGTGTGGAGT+TGG | + | chr7_1:62110720-62110739 | Msa1028910:CDS | 55.0% | |
| GTCATTGGGTGTGGAGTTGG+CGG | + | chr7_1:62110723-62110742 | Msa1028910:CDS | 55.0% | |
| GTGGAGGAAGCCGTTTGCAT+GGG | + | chr7_1:62110745-62110764 | Msa1028910:CDS | 55.0% | |
| ! | GCCAAAGAAGCACACGGCGA+AGG | + | chr7_1:62109048-62109067 | Msa1028910:CDS | 60.0% |
| GGCGAAGGAGATCCAAGCCA+AGG | + | chr7_1:62109063-62109082 | Msa1028910:CDS | 60.0% | |
| AATCGCGGCGGAGGAAAAGC+CGG | + | chr7_1:62109103-62109122 | Msa1028910:CDS | 60.0% | |
| CGAGGCTTGGAGGATTCAGC+AGG | - | chr7_1:62109301-62109320 | None:intergenic | 60.0% | |
| TGCGCAGTCAACCAAACCGG+TGG | + | chr7_1:62110020-62110039 | Msa1028910:intron | 60.0% | |
| GCAGTCAACCAAACCGGTGG+TGG | + | chr7_1:62110023-62110042 | Msa1028910:intron | 60.0% | |
| TGCGCAGTCAACCAAACCGG+TGG | + | chr7_1:62110020-62110039 | Msa1028910:intron | 60.0% | |
| GCAGTCAACCAAACCGGTGG+CGG | + | chr7_1:62110023-62110042 | Msa1028910:intron | 60.0% | |
| !! | GTGGTAGCAAAGGTGGTGGG+AGG | + | chr7_1:62110451-62110470 | Msa1028910:intron | 60.0% |
| !! | GTAGCAAAGGTGGTGGGAGG+TGG | + | chr7_1:62110454-62110473 | Msa1028910:intron | 60.0% |
| GGTGGGAGGTGGCTCTTTGA+AGG | + | chr7_1:62110465-62110484 | Msa1028910:CDS | 60.0% | |
| ! | GGGAGGTGGCTCTTTGAAGG+AGG | + | chr7_1:62110468-62110487 | Msa1028910:CDS | 60.0% |
| !! | GAAGGCAGGGTTGGTAGCGA+AGG | + | chr7_1:62110493-62110512 | Msa1028910:CDS | 60.0% |
| !! | AGGGTTGGTAGCGAAGGTGG+TGG | + | chr7_1:62110499-62110518 | Msa1028910:CDS | 60.0% |
| ATTGGGTGTGGAGTTGGCGG+TGG | + | chr7_1:62110726-62110745 | Msa1028910:CDS | 60.0% | |
| GGTGGAGGAAGCCGTTTGCA+TGG | + | chr7_1:62110744-62110763 | Msa1028910:CDS | 60.0% | |
| ! | GCCAAAGAAGCACACGGCGA+AGG | + | chr7_1:62109048-62109067 | Msa1028910:CDS | 60.0% |
| GGCGAAGGAGATCCAAGCCA+AGG | + | chr7_1:62109063-62109082 | Msa1028910:CDS | 60.0% | |
| AATCGCGGCGGAGGAAAAGC+CGG | + | chr7_1:62109103-62109122 | Msa1028910:CDS | 60.0% | |
| CGAGGCTTGGAGGATTCAGC+AGG | - | chr7_1:62109301-62109320 | None:intergenic | 60.0% | |
| TGCGCAGTCAACCAAACCGG+TGG | + | chr7_1:62110020-62110039 | Msa1028910:intron | 60.0% | |
| GCAGTCAACCAAACCGGTGG+TGG | + | chr7_1:62110023-62110042 | Msa1028910:intron | 60.0% | |
| TGCGCAGTCAACCAAACCGG+TGG | + | chr7_1:62110020-62110039 | Msa1028910:intron | 60.0% | |
| GCAGTCAACCAAACCGGTGG+CGG | + | chr7_1:62110023-62110042 | Msa1028910:intron | 60.0% | |
| !! | GTGGTAGCAAAGGTGGTGGG+AGG | + | chr7_1:62110451-62110470 | Msa1028910:intron | 60.0% |
| !! | GTAGCAAAGGTGGTGGGAGG+TGG | + | chr7_1:62110454-62110473 | Msa1028910:intron | 60.0% |
| GGTGGGAGGTGGCTCTTTGA+AGG | + | chr7_1:62110465-62110484 | Msa1028910:CDS | 60.0% | |
| ! | GGGAGGTGGCTCTTTGAAGG+AGG | + | chr7_1:62110468-62110487 | Msa1028910:CDS | 60.0% |
| !! | GAAGGCAGGGTTGGTAGCGA+AGG | + | chr7_1:62110493-62110512 | Msa1028910:CDS | 60.0% |
| !! | AGGGTTGGTAGCGAAGGTGG+TGG | + | chr7_1:62110499-62110518 | Msa1028910:CDS | 60.0% |
| ATTGGGTGTGGAGTTGGCGG+TGG | + | chr7_1:62110726-62110745 | Msa1028910:CDS | 60.0% | |
| GGTGGAGGAAGCCGTTTGCA+TGG | + | chr7_1:62110744-62110763 | Msa1028910:CDS | 60.0% | |
| !! | GCAGTGAGGGCACTCCCACT+TGG | - | chr7_1:62109167-62109186 | None:intergenic | 65.0% |
| GAATCCTCCAAGCCTCGCCC+TGG | + | chr7_1:62109304-62109323 | Msa1028910:CDS | 65.0% | |
| AACACCAGGGCGAGGCTTGG+AGG | - | chr7_1:62109311-62109330 | None:intergenic | 65.0% | |
| ACGAACACCAGGGCGAGGCT+TGG | - | chr7_1:62109314-62109333 | None:intergenic | 65.0% | |
| AAGCCTCGCCCTGGTGTTCG+TGG | + | chr7_1:62109313-62109332 | Msa1028910:CDS | 65.0% | |
| CTACCACGAACACCAGGGCG+AGG | - | chr7_1:62109319-62109338 | None:intergenic | 65.0% | |
| !! | GGCAGGGTTGGTAGCGAAGG+TGG | + | chr7_1:62110496-62110515 | Msa1028910:CDS | 65.0% |
| !! | GCAGTGAGGGCACTCCCACT+TGG | - | chr7_1:62109167-62109186 | None:intergenic | 65.0% |
| GAATCCTCCAAGCCTCGCCC+TGG | + | chr7_1:62109304-62109323 | Msa1028910:CDS | 65.0% | |
| AACACCAGGGCGAGGCTTGG+AGG | - | chr7_1:62109311-62109330 | None:intergenic | 65.0% | |
| ACGAACACCAGGGCGAGGCT+TGG | - | chr7_1:62109314-62109333 | None:intergenic | 65.0% | |
| AAGCCTCGCCCTGGTGTTCG+TGG | + | chr7_1:62109313-62109332 | Msa1028910:CDS | 65.0% | |
| CTACCACGAACACCAGGGCG+AGG | - | chr7_1:62109319-62109338 | None:intergenic | 65.0% | |
| !! | GGCAGGGTTGGTAGCGAAGG+TGG | + | chr7_1:62110496-62110515 | Msa1028910:CDS | 65.0% |
| GCGCCGCGTCAACCTTGGCT+TGG | - | chr7_1:62109078-62109097 | None:intergenic | 70.0% | |
| CGTCAGCGCCGCGTCAACCT+TGG | - | chr7_1:62109083-62109102 | None:intergenic | 70.0% | |
| !! | GACGCGGCGCTGACGAATCG+CGG | + | chr7_1:62109088-62109107 | Msa1028910:CDS | 70.0% |
| GGGTGTGGAGTTGGCGGTGG+AGG | + | chr7_1:62110729-62110748 | Msa1028910:CDS | 70.0% | |
| GCGCCGCGTCAACCTTGGCT+TGG | - | chr7_1:62109078-62109097 | None:intergenic | 70.0% | |
| CGTCAGCGCCGCGTCAACCT+TGG | - | chr7_1:62109083-62109102 | None:intergenic | 70.0% | |
| !! | GACGCGGCGCTGACGAATCG+CGG | + | chr7_1:62109088-62109107 | Msa1028910:CDS | 70.0% |
| GGGTGTGGAGTTGGCGGTGG+AGG | + | chr7_1:62110729-62110748 | Msa1028910:CDS | 70.0% | |
| !! | GCGGCGCTGACGAATCGCGG+CGG | + | chr7_1:62109091-62109110 | Msa1028910:CDS | 75.0% |
| ! | GCGCTGACGAATCGCGGCGG+AGG | + | chr7_1:62109094-62109113 | Msa1028910:CDS | 75.0% |
| !! | GCGGCGCTGACGAATCGCGG+CGG | + | chr7_1:62109091-62109110 | Msa1028910:CDS | 75.0% |
| ! | GCGCTGACGAATCGCGGCGG+AGG | + | chr7_1:62109094-62109113 | Msa1028910:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 62109031 | 62110820 | 62109031 | ID=Msa1028910;Name=Msa1028910 |
| chr7_1 | mRNA | 62109031 | 62110820 | 62109031 | ID=Msa1028910-mRNA-1;Parent=Msa1028910;Name=Msa1028910-mRNA-1;_AED=0.08;_eAED=0.25;_QI=0|0|0|1|1|1|3|0|193 |
| chr7_1 | exon | 62109031 | 62109334 | 62109031 | ID=Msa1028910-mRNA-1:exon:13191;Parent=Msa1028910-mRNA-1 |
| chr7_1 | exon | 62110458 | 62110612 | 62110458 | ID=Msa1028910-mRNA-1:exon:13192;Parent=Msa1028910-mRNA-1 |
| chr7_1 | exon | 62110698 | 62110820 | 62110698 | ID=Msa1028910-mRNA-1:exon:13193;Parent=Msa1028910-mRNA-1 |
| chr7_1 | CDS | 62109031 | 62109334 | 62109031 | ID=Msa1028910-mRNA-1:cds;Parent=Msa1028910-mRNA-1 |
| chr7_1 | CDS | 62110458 | 62110612 | 62110458 | ID=Msa1028910-mRNA-1:cds;Parent=Msa1028910-mRNA-1 |
| chr7_1 | CDS | 62110698 | 62110820 | 62110698 | ID=Msa1028910-mRNA-1:cds;Parent=Msa1028910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
