Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1068040 | XP_003624171.2 | 93.750 | 112 | 1 | 1 | 1 | 112 | 1 | 106 | 9.35e-66 | 207 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1068040 | sp|Q9FFD8|MBS2_ARATH | 72.321 | 112 | 23 | 2 | 1 | 112 | 1 | 104 | 2.90e-51 | 163 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1068040 | G7KRI0 | 93.750 | 112 | 1 | 1 | 1 | 112 | 1 | 106 | 4.47e-66 | 207 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0125810 | Msa1068040 | -0.800251 | 1.572973e-48 | -8.615850e-47 |
| Msa1028910 | Msa1068040 | 0.998165 | 9.770045e-258 | -8.615850e-47 |
| Msa1068040 | Msa1121870 | 0.896587 | 3.196308e-76 | -8.615850e-47 |
| Msa0482840 | Msa1068040 | -0.809355 | 1.971623e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1068040 | MtrunA17_Chr7g0249291 | 93.750 | 112 | 1 | 1 | 1 | 112 | 1 | 106 | 8.60e-70 | 207 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1068040 | AT5G16470.2 | 72.321 | 112 | 23 | 2 | 1 | 112 | 1 | 104 | 2.95e-52 | 163 |
| Msa1068040 | AT5G16470.1 | 72.321 | 112 | 23 | 2 | 1 | 112 | 1 | 104 | 2.95e-52 | 163 |
| Msa1068040 | AT3G02790.1 | 72.321 | 112 | 24 | 2 | 1 | 112 | 1 | 105 | 1.62e-51 | 161 |
Find 75 sgRNAs with CRISPR-Local
Find 354 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTATGGGTTAGAAGAAAAT+TGG | 0.146164 | 7_2:+63038381 | Msa1068040:CDS |
| TCCTTCGCCGTGTGCTTCTT+TGG | 0.219018 | 7_2:-63036852 | None:intergenic |
| TCTTCCTCAAAAGGGATCTT+TGG | 0.247762 | 7_2:-63037044 | None:intergenic |
| GAAGCTATTGTTGGCGGTCT+TGG | 0.275282 | 7_2:+63038590 | Msa1068040:CDS |
| TCATCACTACCCTCTAAATT+TGG | 0.297989 | 7_2:-63038614 | None:intergenic |
| CGGTCTTGGGCCAAATTTAG+AGG | 0.351765 | 7_2:+63038604 | Msa1068040:CDS |
| GTAGCAAAGGTGGTGGGAGG+TGG | 0.357582 | 7_2:+63038257 | Msa1068040:intron |
| AAGCTATTGTTGGCGGTCTT+GGG | 0.360222 | 7_2:+63038591 | Msa1068040:CDS |
| CGAGAAATTGAAGCTATTGT+TGG | 0.362041 | 7_2:+63038581 | Msa1068040:CDS |
| TAAAGAGGCAAGAGGGTAGT+TGG | 0.365745 | 7_2:+63038496 | Msa1068040:intron |
| GTAGTTGGATTAGTGGTCAT+TGG | 0.381796 | 7_2:+63038511 | Msa1068040:CDS |
| GGGTGTGGAGTTGGCGGTGG+AGG | 0.407827 | 7_2:+63038532 | Msa1068040:CDS |
| TTATGGGTTAGAAGAAAATT+GGG | 0.415374 | 7_2:+63038382 | Msa1068040:CDS |
| TCGAGCAACTTGGTGGAAAT+TGG | 0.417787 | 7_2:+63038337 | Msa1068040:CDS |
| ATTGGGTGTGGAGTTGGCGG+TGG | 0.425398 | 7_2:+63038529 | Msa1068040:CDS |
| TAGTTGGATTAGTGGTCATT+GGG | 0.431442 | 7_2:+63038512 | Msa1068040:CDS |
| GGCTCTTTGAAGGAGGTAGA+AGG | 0.438932 | 7_2:+63038278 | Msa1068040:CDS |
| ATCTGCATCGATTTCACATC+AGG | 0.442800 | 7_2:-63037002 | None:intergenic |
| GGTGGGAGGTGGCTCTTTGA+AGG | 0.446880 | 7_2:+63038268 | Msa1068040:CDS |
| CAAGAGGGTAGTTGGATTAG+TGG | 0.446935 | 7_2:+63038504 | Msa1068040:CDS |
| GAAGGCAGGGTTGGTGGCGA+AGG | 0.448406 | 7_2:+63038296 | Msa1068040:CDS |
| GGGGACGTGATACTTCTTAT+GGG | 0.450855 | 7_2:+63038366 | Msa1068040:CDS |
| GCCAAAGAAGCACACGGCGA+AGG | 0.455639 | 7_2:+63036851 | Msa1068040:CDS |
| GAAAAGCCGGTTTGCTTGAT+CGG | 0.458319 | 7_2:+63036919 | Msa1068040:CDS |
| AAGCCTCGCCCTGGTGTTCG+TGG | 0.465707 | 7_2:+63037116 | Msa1068040:CDS |
| AGGGTTGGTGGCGAAGGTGG+TGG | 0.467061 | 7_2:+63038302 | Msa1068040:CDS |
| GAGGTAGAAGGCAGGGTTGG+TGG | 0.473973 | 7_2:+63038290 | Msa1068040:CDS |
| AAGGAGGTAGAAGGCAGGGT+TGG | 0.475550 | 7_2:+63038287 | Msa1068040:CDS |
| GAAGGTGGTGGAAGGCTTTG+TGG | 0.476145 | 7_2:+63038314 | Msa1068040:CDS |
| GTCATTGGGTGTGGAGTTGG+CGG | 0.476265 | 7_2:+63038526 | Msa1068040:CDS |
| GGATTAGTGGTCATTGGGTG+TGG | 0.477676 | 7_2:+63038517 | Msa1068040:CDS |
| GTGGTCATTGGGTGTGGAGT+TGG | 0.478540 | 7_2:+63038523 | Msa1068040:CDS |
| GGCAGGGTTGGTGGCGAAGG+TGG | 0.481735 | 7_2:+63038299 | Msa1068040:CDS |
| TGATCGGATCGGTGTTGAAA+AGG | 0.486280 | 7_2:+63036935 | Msa1068040:CDS |
| GCGCCGCGTCAACCTTGGCT+TGG | 0.491264 | 7_2:-63036878 | None:intergenic |
| CGAGGCTTGGAGGATTCAGC+AGG | 0.496573 | 7_2:-63037101 | None:intergenic |
| ACAACTTCTTCCCATGCAAA+CGG | 0.499045 | 7_2:-63038558 | None:intergenic |
| AACACCAGGGCGAGGCTTGG+AGG | 0.501344 | 7_2:-63037111 | None:intergenic |
| GAAATTGAAGCTATTGTTGG+CGG | 0.503271 | 7_2:+63038584 | Msa1068040:CDS |
| GAATCCTCCAAGCCTCGCCC+TGG | 0.508082 | 7_2:+63037107 | Msa1068040:CDS |
| ACCGATCCGATCAAGCAAAC+CGG | 0.511341 | 7_2:-63036925 | None:intergenic |
| GCGCTGACGAATCGCGGCGG+AGG | 0.512793 | 7_2:+63036897 | Msa1068040:CDS |
| GCAGTGAGGGCACTCCCACT+TGG | 0.515764 | 7_2:-63036967 | None:intergenic |
| CTTGGTGGAAATTGGTGTGT+GGG | 0.515874 | 7_2:+63038345 | Msa1068040:CDS |
| TTGAGACTACCACGAACACC+AGG | 0.527196 | 7_2:-63037125 | None:intergenic |
| TTGGTGGCGAAGGTGGTGGA+AGG | 0.530577 | 7_2:+63038306 | Msa1068040:CDS |
| TACGGTGGTAGCAAAGGTGG+TGG | 0.539412 | 7_2:+63038250 | Msa1068040:intron |
| GGCTTTGTGGTCGAGCAACT+TGG | 0.541820 | 7_2:+63038327 | Msa1068040:CDS |
| GGTGGAGGAAGCCGTTTGCA+TGG | 0.541853 | 7_2:+63038547 | Msa1068040:CDS |
| GATCGGATCGGTGTTGAAAA+GGG | 0.542506 | 7_2:+63036936 | Msa1068040:CDS |
| CAATCATCAATCAAGATGAC+GGG | 0.549212 | 7_2:+63036819 | None:intergenic |
| GGGAGGTGGCTCTTTGAAGG+AGG | 0.552437 | 7_2:+63038271 | Msa1068040:CDS |
| AATCGCGGCGGAGGAAAAGC+CGG | 0.554621 | 7_2:+63036906 | Msa1068040:CDS |
| CTTTGAAGGAGGTAGAAGGC+AGG | 0.556760 | 7_2:+63038282 | Msa1068040:CDS |
| GTGGAGGAAGCCGTTTGCAT+GGG | 0.557593 | 7_2:+63038548 | Msa1068040:CDS |
| GTTAGAAGAAAATTGGGAGA+TGG | 0.564335 | 7_2:+63038388 | Msa1068040:CDS |
| TTGGTGGAAATTGGTGTGTG+GGG | 0.565390 | 7_2:+63038346 | Msa1068040:CDS |
| GCCGGTTTGCTTGATCGGAT+CGG | 0.570802 | 7_2:+63036924 | Msa1068040:CDS |
| ATGTACGGTGGTAGCAAAGG+TGG | 0.589543 | 7_2:+63038247 | Msa1068040:intron |
| TTTGTGGTCGAGCAACTTGG+TGG | 0.596208 | 7_2:+63038330 | Msa1068040:CDS |
| TTGTTGTTAAAGAGGCAAGA+GGG | 0.597259 | 7_2:+63038489 | Msa1068040:intron |
| CTACCACGAACACCAGGGCG+AGG | 0.597449 | 7_2:-63037119 | None:intergenic |
| TTTGAAGGAGGTAGAAGGCA+GGG | 0.604114 | 7_2:+63038283 | Msa1068040:CDS |
| ATTGTTGTTAAAGAGGCAAG+AGG | 0.606638 | 7_2:+63038488 | Msa1068040:intron |
| GTGGTAGCAAAGGTGGTGGG+AGG | 0.613507 | 7_2:+63038254 | Msa1068040:intron |
| ACTTGGTGGAAATTGGTGTG+TGG | 0.626805 | 7_2:+63038344 | Msa1068040:CDS |
| ACGGTGGTAGCAAAGGTGGT+GGG | 0.629493 | 7_2:+63038251 | Msa1068040:intron |
| CGGATCGGTGTTGAAAAGGG+TGG | 0.630433 | 7_2:+63036939 | Msa1068040:CDS |
| TGGTGGAAATTGGTGTGTGG+GGG | 0.639428 | 7_2:+63038347 | Msa1068040:CDS |
| GGCGAAGGAGATCCAAGCCA+AGG | 0.648739 | 7_2:+63036866 | Msa1068040:CDS |
| AGCGAAGCCAAAGAAGCACA+CGG | 0.650014 | 7_2:+63036845 | Msa1068040:CDS |
| GATCCAAGCCAAGGTTGACG+CGG | 0.654184 | 7_2:+63036875 | Msa1068040:CDS |
| AAAAGGGTGGACACGCCAAG+TGG | 0.671036 | 7_2:+63036952 | Msa1068040:CDS |
| AAAGGGTGGACACGCCAAGT+GGG | 0.690189 | 7_2:+63036953 | Msa1068040:CDS |
| TGAGACTACCACGAACACCA+GGG | 0.697182 | 7_2:-63037124 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTGAATAATTTGTCAAA+TGG | + | chr7_2:63037267-63037286 | Msa1068040:intron | 15.0% |
| !!! | TATTGAATAATTTGTCAAAT+GGG | + | chr7_2:63037268-63037287 | Msa1068040:intron | 15.0% |
| !!! | ATGTCTTGTATTAAATTTTA+AGG | + | chr7_2:63037752-63037771 | Msa1068040:intron | 15.0% |
| !!! | TTTATACTAATTAGTTTAGA+AGG | + | chr7_2:63038062-63038081 | Msa1068040:intron | 15.0% |
| !!! | TTATTGAATAATTTGTCAAA+TGG | + | chr7_2:63037267-63037286 | Msa1068040:intron | 15.0% |
| !!! | TATTGAATAATTTGTCAAAT+GGG | + | chr7_2:63037268-63037287 | Msa1068040:intron | 15.0% |
| !!! | ATGTCTTGTATTAAATTTTA+AGG | + | chr7_2:63037752-63037771 | Msa1068040:intron | 15.0% |
| !!! | TTTATACTAATTAGTTTAGA+AGG | + | chr7_2:63038062-63038081 | Msa1068040:intron | 15.0% |
| !!! | AATATCAAAATGATGCATTT+TGG | + | chr7_2:63037308-63037327 | Msa1068040:intron | 20.0% |
| !!! | TTGTTGGTTTAGTTTATTTT+TGG | + | chr7_2:63037579-63037598 | Msa1068040:intron | 20.0% |
| !!! | TAGTTTATTTTTGGTATGTT+TGG | + | chr7_2:63037588-63037607 | Msa1068040:intron | 20.0% |
| !!! | CTTGTATTAAATTTTAAGGT+TGG | + | chr7_2:63037756-63037775 | Msa1068040:intron | 20.0% |
| !!! | TAAATTTTAAGGTTGGTTTT+CGG | + | chr7_2:63037763-63037782 | Msa1068040:intron | 20.0% |
| !! | TATAATCTGAATCTCTATTA+TGG | + | chr7_2:63038164-63038183 | Msa1068040:intron | 20.0% |
| !! | ATTATATATCCAAGAGAAAA+AGG | - | chr7_2:63038229-63038248 | None:intergenic | 20.0% |
| !!! | AATATCAAAATGATGCATTT+TGG | + | chr7_2:63037308-63037327 | Msa1068040:intron | 20.0% |
| !!! | TTGTTGGTTTAGTTTATTTT+TGG | + | chr7_2:63037579-63037598 | Msa1068040:intron | 20.0% |
| !!! | TAGTTTATTTTTGGTATGTT+TGG | + | chr7_2:63037588-63037607 | Msa1068040:intron | 20.0% |
| !!! | CTTGTATTAAATTTTAAGGT+TGG | + | chr7_2:63037756-63037775 | Msa1068040:intron | 20.0% |
| !!! | TAAATTTTAAGGTTGGTTTT+CGG | + | chr7_2:63037763-63037782 | Msa1068040:intron | 20.0% |
| !! | TATAATCTGAATCTCTATTA+TGG | + | chr7_2:63038164-63038183 | Msa1068040:intron | 20.0% |
| !! | ATTATATATCCAAGAGAAAA+AGG | - | chr7_2:63038229-63038248 | None:intergenic | 20.0% |
| !!! | TTTCAACTTGTCTTTTTTAG+AGG | + | chr7_2:63037243-63037262 | Msa1068040:intron | 25.0% |
| ! | GGAACAATATATTACATTCA+AGG | - | chr7_2:63037436-63037455 | None:intergenic | 25.0% |
| ! | AACATATAGTAGTAACTAGT+AGG | - | chr7_2:63037483-63037502 | None:intergenic | 25.0% |
| ! | TCTCTTGGATATATAATGTA+CGG | + | chr7_2:63038232-63038251 | Msa1068040:intron | 25.0% |
| !!! | TTATGGGTTAGAAGAAAATT+GGG | + | chr7_2:63038382-63038401 | Msa1068040:CDS | 25.0% |
| ! | ACAATAACAGAAAACAATCT+AGG | - | chr7_2:63038473-63038492 | None:intergenic | 25.0% |
| !! | TTCTGTTATTGTTGTTAAAG+AGG | + | chr7_2:63038481-63038500 | Msa1068040:intron | 25.0% |
| !!! | TTTCAACTTGTCTTTTTTAG+AGG | + | chr7_2:63037243-63037262 | Msa1068040:intron | 25.0% |
| ! | GGAACAATATATTACATTCA+AGG | - | chr7_2:63037436-63037455 | None:intergenic | 25.0% |
| ! | AACATATAGTAGTAACTAGT+AGG | - | chr7_2:63037483-63037502 | None:intergenic | 25.0% |
| ! | TCTCTTGGATATATAATGTA+CGG | + | chr7_2:63038232-63038251 | Msa1068040:intron | 25.0% |
| !!! | TTATGGGTTAGAAGAAAATT+GGG | + | chr7_2:63038382-63038401 | Msa1068040:CDS | 25.0% |
| ! | ACAATAACAGAAAACAATCT+AGG | - | chr7_2:63038473-63038492 | None:intergenic | 25.0% |
| !! | TTCTGTTATTGTTGTTAAAG+AGG | + | chr7_2:63038481-63038500 | Msa1068040:intron | 25.0% |
| TAGTAAAAGCCATGAATGAA+GGG | - | chr7_2:63037197-63037216 | None:intergenic | 30.0% | |
| ATAGTAAAAGCCATGAATGA+AGG | - | chr7_2:63037198-63037217 | None:intergenic | 30.0% | |
| !! | TACATTCAAGGCTTTAAGAA+GGG | - | chr7_2:63037424-63037443 | None:intergenic | 30.0% |
| !! | TTACATTCAAGGCTTTAAGA+AGG | - | chr7_2:63037425-63037444 | None:intergenic | 30.0% |
| GTAATATATTGTTCCCTTGA+TGG | + | chr7_2:63037441-63037460 | Msa1068040:intron | 30.0% | |
| ATCATATTAACTGCCATCAA+GGG | - | chr7_2:63037457-63037476 | None:intergenic | 30.0% | |
| GATTGTCAGTATTAAATCCA+CGG | + | chr7_2:63037700-63037719 | Msa1068040:intron | 30.0% | |
| ! | GAGGTTTGGTAAAATTTCTA+TGG | + | chr7_2:63037727-63037746 | Msa1068040:intron | 30.0% |
| TAAGTTCAGTAGTTAGGTTA+TGG | + | chr7_2:63037850-63037869 | Msa1068040:intron | 30.0% | |
| AAGTTCAGTAGTTAGGTTAT+GGG | + | chr7_2:63037851-63037870 | Msa1068040:intron | 30.0% | |
| CATCATAAAACCGACAAATT+TGG | - | chr7_2:63038005-63038024 | None:intergenic | 30.0% | |
| AGTGATACAAACTAGACATA+CGG | + | chr7_2:63038105-63038124 | Msa1068040:intron | 30.0% | |
| ! | TGATGATATGTTTTACATGC+TGG | + | chr7_2:63038135-63038154 | Msa1068040:intron | 30.0% |
| !! | CTTATGGGTTAGAAGAAAAT+TGG | + | chr7_2:63038381-63038400 | Msa1068040:CDS | 30.0% |
| TAGTAAAAGCCATGAATGAA+GGG | - | chr7_2:63037197-63037216 | None:intergenic | 30.0% | |
| ATAGTAAAAGCCATGAATGA+AGG | - | chr7_2:63037198-63037217 | None:intergenic | 30.0% | |
| !! | TACATTCAAGGCTTTAAGAA+GGG | - | chr7_2:63037424-63037443 | None:intergenic | 30.0% |
| !! | TTACATTCAAGGCTTTAAGA+AGG | - | chr7_2:63037425-63037444 | None:intergenic | 30.0% |
| GTAATATATTGTTCCCTTGA+TGG | + | chr7_2:63037441-63037460 | Msa1068040:intron | 30.0% | |
| ATCATATTAACTGCCATCAA+GGG | - | chr7_2:63037457-63037476 | None:intergenic | 30.0% | |
| GATTGTCAGTATTAAATCCA+CGG | + | chr7_2:63037700-63037719 | Msa1068040:intron | 30.0% | |
| ! | GAGGTTTGGTAAAATTTCTA+TGG | + | chr7_2:63037727-63037746 | Msa1068040:intron | 30.0% |
| TAAGTTCAGTAGTTAGGTTA+TGG | + | chr7_2:63037850-63037869 | Msa1068040:intron | 30.0% | |
| AAGTTCAGTAGTTAGGTTAT+GGG | + | chr7_2:63037851-63037870 | Msa1068040:intron | 30.0% | |
| CATCATAAAACCGACAAATT+TGG | - | chr7_2:63038005-63038024 | None:intergenic | 30.0% | |
| AGTGATACAAACTAGACATA+CGG | + | chr7_2:63038105-63038124 | Msa1068040:intron | 30.0% | |
| ! | TGATGATATGTTTTACATGC+TGG | + | chr7_2:63038135-63038154 | Msa1068040:intron | 30.0% |
| !! | CTTATGGGTTAGAAGAAAAT+TGG | + | chr7_2:63038381-63038400 | Msa1068040:CDS | 30.0% |
| ! | CAAGCTTTTCTTCCTCAAAA+GGG | - | chr7_2:63037055-63037074 | None:intergenic | 35.0% |
| ! | ACAAGCTTTTCTTCCTCAAA+AGG | - | chr7_2:63037056-63037075 | None:intergenic | 35.0% |
| TTTAATCGACCCTTCATTCA+TGG | + | chr7_2:63037185-63037204 | Msa1068040:intron | 35.0% | |
| TTATGATGCTGTGTATGAAG+TGG | + | chr7_2:63037343-63037362 | Msa1068040:intron | 35.0% | |
| ! | TGCTGAAAAGGGTTTTTGAT+GGG | + | chr7_2:63037366-63037385 | Msa1068040:intron | 35.0% |
| ! | AAAGGGTTTTTGATGGGAAT+TGG | + | chr7_2:63037372-63037391 | Msa1068040:intron | 35.0% |
| ! | CAGTTGTGCTGTTATTGATT+TGG | + | chr7_2:63037398-63037417 | Msa1068040:intron | 35.0% |
| CATCATATTAACTGCCATCA+AGG | - | chr7_2:63037458-63037477 | None:intergenic | 35.0% | |
| ! | CTTGATGGCAGTTAATATGA+TGG | + | chr7_2:63037456-63037475 | Msa1068040:intron | 35.0% |
| TCTGTCCTTTGATCATAAAC+TGG | + | chr7_2:63037550-63037569 | Msa1068040:intron | 35.0% | |
| TCAAGCCAGTTTATGATCAA+AGG | - | chr7_2:63037558-63037577 | None:intergenic | 35.0% | |
| ACTCACATAAAAACTTGCCT+CGG | - | chr7_2:63037646-63037665 | None:intergenic | 35.0% | |
| ! | GCAAGTTTTTATGTGAGTTC+AGG | + | chr7_2:63037648-63037667 | Msa1068040:intron | 35.0% |
| AGTTCAGTAGTTAGGTTATG+GGG | + | chr7_2:63037852-63037871 | Msa1068040:intron | 35.0% | |
| !! | AATTTGGATTGTGGCTTTGT+GGG | - | chr7_2:63037989-63038008 | None:intergenic | 35.0% |
| ! | AAATTTGGATTGTGGCTTTG+TGG | - | chr7_2:63037990-63038009 | None:intergenic | 35.0% |
| AAGCCACAATCCAAATTTGT+CGG | + | chr7_2:63037992-63038011 | Msa1068040:intron | 35.0% | |
| AAACCGACAAATTTGGATTG+TGG | - | chr7_2:63037998-63038017 | None:intergenic | 35.0% | |
| AAGGATAACCAAAAGCTACT+GGG | + | chr7_2:63038081-63038100 | Msa1068040:intron | 35.0% | |
| GGATCACTCAAAATGCTTAA+TGG | - | chr7_2:63038200-63038219 | None:intergenic | 35.0% | |
| CTTGGATATATAATGTACGG+TGG | + | chr7_2:63038235-63038254 | Msa1068040:intron | 35.0% | |
| GTTAGAAGAAAATTGGGAGA+TGG | + | chr7_2:63038388-63038407 | Msa1068040:CDS | 35.0% | |
| !! | GATGGACAAAGTGTTCATTT+TGG | + | chr7_2:63038406-63038425 | Msa1068040:intron | 35.0% |
| ! | ATTGTTGTTAAAGAGGCAAG+AGG | + | chr7_2:63038488-63038507 | Msa1068040:intron | 35.0% |
| ! | TTGTTGTTAAAGAGGCAAGA+GGG | + | chr7_2:63038489-63038508 | Msa1068040:intron | 35.0% |
| !! | TAGTTGGATTAGTGGTCATT+GGG | + | chr7_2:63038512-63038531 | Msa1068040:CDS | 35.0% |
| CGAGAAATTGAAGCTATTGT+TGG | + | chr7_2:63038581-63038600 | Msa1068040:CDS | 35.0% | |
| GAAATTGAAGCTATTGTTGG+CGG | + | chr7_2:63038584-63038603 | Msa1068040:CDS | 35.0% | |
| ! | CAAGCTTTTCTTCCTCAAAA+GGG | - | chr7_2:63037055-63037074 | None:intergenic | 35.0% |
| ! | ACAAGCTTTTCTTCCTCAAA+AGG | - | chr7_2:63037056-63037075 | None:intergenic | 35.0% |
| TTTAATCGACCCTTCATTCA+TGG | + | chr7_2:63037185-63037204 | Msa1068040:intron | 35.0% | |
| TTATGATGCTGTGTATGAAG+TGG | + | chr7_2:63037343-63037362 | Msa1068040:intron | 35.0% | |
| ! | TGCTGAAAAGGGTTTTTGAT+GGG | + | chr7_2:63037366-63037385 | Msa1068040:intron | 35.0% |
| ! | AAAGGGTTTTTGATGGGAAT+TGG | + | chr7_2:63037372-63037391 | Msa1068040:intron | 35.0% |
| ! | CAGTTGTGCTGTTATTGATT+TGG | + | chr7_2:63037398-63037417 | Msa1068040:intron | 35.0% |
| CATCATATTAACTGCCATCA+AGG | - | chr7_2:63037458-63037477 | None:intergenic | 35.0% | |
| ! | CTTGATGGCAGTTAATATGA+TGG | + | chr7_2:63037456-63037475 | Msa1068040:intron | 35.0% |
| TCTGTCCTTTGATCATAAAC+TGG | + | chr7_2:63037550-63037569 | Msa1068040:intron | 35.0% | |
| TCAAGCCAGTTTATGATCAA+AGG | - | chr7_2:63037558-63037577 | None:intergenic | 35.0% | |
| ACTCACATAAAAACTTGCCT+CGG | - | chr7_2:63037646-63037665 | None:intergenic | 35.0% | |
| ! | GCAAGTTTTTATGTGAGTTC+AGG | + | chr7_2:63037648-63037667 | Msa1068040:intron | 35.0% |
| AGTTCAGTAGTTAGGTTATG+GGG | + | chr7_2:63037852-63037871 | Msa1068040:intron | 35.0% | |
| !! | AATTTGGATTGTGGCTTTGT+GGG | - | chr7_2:63037989-63038008 | None:intergenic | 35.0% |
| ! | AAATTTGGATTGTGGCTTTG+TGG | - | chr7_2:63037990-63038009 | None:intergenic | 35.0% |
| AAGCCACAATCCAAATTTGT+CGG | + | chr7_2:63037992-63038011 | Msa1068040:intron | 35.0% | |
| AAACCGACAAATTTGGATTG+TGG | - | chr7_2:63037998-63038017 | None:intergenic | 35.0% | |
| AAGGATAACCAAAAGCTACT+GGG | + | chr7_2:63038081-63038100 | Msa1068040:intron | 35.0% | |
| GGATCACTCAAAATGCTTAA+TGG | - | chr7_2:63038200-63038219 | None:intergenic | 35.0% | |
| CTTGGATATATAATGTACGG+TGG | + | chr7_2:63038235-63038254 | Msa1068040:intron | 35.0% | |
| GTTAGAAGAAAATTGGGAGA+TGG | + | chr7_2:63038388-63038407 | Msa1068040:CDS | 35.0% | |
| !! | GATGGACAAAGTGTTCATTT+TGG | + | chr7_2:63038406-63038425 | Msa1068040:intron | 35.0% |
| ! | ATTGTTGTTAAAGAGGCAAG+AGG | + | chr7_2:63038488-63038507 | Msa1068040:intron | 35.0% |
| ! | TTGTTGTTAAAGAGGCAAGA+GGG | + | chr7_2:63038489-63038508 | Msa1068040:intron | 35.0% |
| !! | TAGTTGGATTAGTGGTCATT+GGG | + | chr7_2:63038512-63038531 | Msa1068040:CDS | 35.0% |
| CGAGAAATTGAAGCTATTGT+TGG | + | chr7_2:63038581-63038600 | Msa1068040:CDS | 35.0% | |
| GAAATTGAAGCTATTGTTGG+CGG | + | chr7_2:63038584-63038603 | Msa1068040:CDS | 35.0% | |
| !! | ATCTGCATCGATTTCACATC+AGG | - | chr7_2:63037005-63037024 | None:intergenic | 40.0% |
| TCTTCCTCAAAAGGGATCTT+TGG | - | chr7_2:63037047-63037066 | None:intergenic | 40.0% | |
| ! | TGTATGAAGTGGTGCTGAAA+AGG | + | chr7_2:63037354-63037373 | Msa1068040:intron | 40.0% |
| ! | GTATGAAGTGGTGCTGAAAA+GGG | + | chr7_2:63037355-63037374 | Msa1068040:intron | 40.0% |
| ! | GTGCTGAAAAGGGTTTTTGA+TGG | + | chr7_2:63037365-63037384 | Msa1068040:intron | 40.0% |
| !! | CATAAACTGGCTTGAGTTGT+TGG | + | chr7_2:63037563-63037582 | Msa1068040:intron | 40.0% |
| ! | ATGCCAAACTAACTTGTGCT+CGG | + | chr7_2:63037676-63037695 | Msa1068040:intron | 40.0% |
| GTATTAAATCCACGGCAATG+AGG | + | chr7_2:63037708-63037727 | Msa1068040:intron | 40.0% | |
| !!! | TTTTAAGGTTGGTTTTCGGC+TGG | + | chr7_2:63037767-63037786 | Msa1068040:intron | 40.0% |
| !!! | TTTAAGGTTGGTTTTCGGCT+GGG | + | chr7_2:63037768-63037787 | Msa1068040:intron | 40.0% |
| GGTGGTTAAGTTCAGTAGTT+AGG | + | chr7_2:63037844-63037863 | Msa1068040:intron | 40.0% | |
| GTTCAGTAGTCCGAATGTAT+CGG | + | chr7_2:63037923-63037942 | Msa1068040:intron | 40.0% | |
| ACACTGGTAACCGATACATT+CGG | - | chr7_2:63037936-63037955 | None:intergenic | 40.0% | |
| ! | TGCAGCTTTTGTTCTGCATT+TGG | + | chr7_2:63038037-63038056 | Msa1068040:intron | 40.0% |
| GAAGGATAACCAAAAGCTAC+TGG | + | chr7_2:63038080-63038099 | Msa1068040:intron | 40.0% | |
| ! | TCCTCTGTTCCTTTTTCTCT+TGG | + | chr7_2:63038217-63038236 | Msa1068040:intron | 40.0% |
| TCCAAGAGAAAAAGGAACAG+AGG | - | chr7_2:63038221-63038240 | None:intergenic | 40.0% | |
| ATAATGTACGGTGGTAGCAA+AGG | + | chr7_2:63038244-63038263 | Msa1068040:intron | 40.0% | |
| !! | GTAGTTGGATTAGTGGTCAT+TGG | + | chr7_2:63038511-63038530 | Msa1068040:CDS | 40.0% |
| ACAACTTCTTCCCATGCAAA+CGG | - | chr7_2:63038561-63038580 | None:intergenic | 40.0% | |
| !! | ATCTGCATCGATTTCACATC+AGG | - | chr7_2:63037005-63037024 | None:intergenic | 40.0% |
| TCTTCCTCAAAAGGGATCTT+TGG | - | chr7_2:63037047-63037066 | None:intergenic | 40.0% | |
| ! | TGTATGAAGTGGTGCTGAAA+AGG | + | chr7_2:63037354-63037373 | Msa1068040:intron | 40.0% |
| ! | GTATGAAGTGGTGCTGAAAA+GGG | + | chr7_2:63037355-63037374 | Msa1068040:intron | 40.0% |
| ! | GTGCTGAAAAGGGTTTTTGA+TGG | + | chr7_2:63037365-63037384 | Msa1068040:intron | 40.0% |
| !! | CATAAACTGGCTTGAGTTGT+TGG | + | chr7_2:63037563-63037582 | Msa1068040:intron | 40.0% |
| ! | ATGCCAAACTAACTTGTGCT+CGG | + | chr7_2:63037676-63037695 | Msa1068040:intron | 40.0% |
| GTATTAAATCCACGGCAATG+AGG | + | chr7_2:63037708-63037727 | Msa1068040:intron | 40.0% | |
| !!! | TTTTAAGGTTGGTTTTCGGC+TGG | + | chr7_2:63037767-63037786 | Msa1068040:intron | 40.0% |
| !!! | TTTAAGGTTGGTTTTCGGCT+GGG | + | chr7_2:63037768-63037787 | Msa1068040:intron | 40.0% |
| GGTGGTTAAGTTCAGTAGTT+AGG | + | chr7_2:63037844-63037863 | Msa1068040:intron | 40.0% | |
| GTTCAGTAGTCCGAATGTAT+CGG | + | chr7_2:63037923-63037942 | Msa1068040:intron | 40.0% | |
| ACACTGGTAACCGATACATT+CGG | - | chr7_2:63037936-63037955 | None:intergenic | 40.0% | |
| ! | TGCAGCTTTTGTTCTGCATT+TGG | + | chr7_2:63038037-63038056 | Msa1068040:intron | 40.0% |
| GAAGGATAACCAAAAGCTAC+TGG | + | chr7_2:63038080-63038099 | Msa1068040:intron | 40.0% | |
| ! | TCCTCTGTTCCTTTTTCTCT+TGG | + | chr7_2:63038217-63038236 | Msa1068040:intron | 40.0% |
| TCCAAGAGAAAAAGGAACAG+AGG | - | chr7_2:63038221-63038240 | None:intergenic | 40.0% | |
| ATAATGTACGGTGGTAGCAA+AGG | + | chr7_2:63038244-63038263 | Msa1068040:intron | 40.0% | |
| !! | GTAGTTGGATTAGTGGTCAT+TGG | + | chr7_2:63038511-63038530 | Msa1068040:CDS | 40.0% |
| ACAACTTCTTCCCATGCAAA+CGG | - | chr7_2:63038561-63038580 | None:intergenic | 40.0% | |
| !! | GAAAAGCCGGTTTGCTTGAT+CGG | + | chr7_2:63036919-63036938 | Msa1068040:CDS | 45.0% |
| !! | TGATCGGATCGGTGTTGAAA+AGG | + | chr7_2:63036935-63036954 | Msa1068040:CDS | 45.0% |
| !! | GATCGGATCGGTGTTGAAAA+GGG | + | chr7_2:63036936-63036955 | Msa1068040:CDS | 45.0% |
| ! | GCATCCAAAGATCCCTTTTG+AGG | + | chr7_2:63037040-63037059 | Msa1068040:CDS | 45.0% |
| TCACCGAGCACAAGTTAGTT+TGG | - | chr7_2:63037682-63037701 | None:intergenic | 45.0% | |
| AAATCCACGGCAATGAGGTT+TGG | + | chr7_2:63037713-63037732 | Msa1068040:intron | 45.0% | |
| TTTACCAAACCTCATTGCCG+TGG | - | chr7_2:63037720-63037739 | None:intergenic | 45.0% | |
| CTACTGAACTTAACCACCAC+CGG | - | chr7_2:63037842-63037861 | None:intergenic | 45.0% | |
| AGCTTTCCACGTAACCTTAG+AGG | + | chr7_2:63037956-63037975 | Msa1068040:intron | 45.0% | |
| !! | CACAATCCTCTAAGGTTACG+TGG | - | chr7_2:63037965-63037984 | None:intergenic | 45.0% |
| TTGTGGGTCACAATCCTCTA+AGG | - | chr7_2:63037973-63037992 | None:intergenic | 45.0% | |
| ! | TATCACTGCCCAGTAGCTTT+TGG | - | chr7_2:63038092-63038111 | None:intergenic | 45.0% |
| TTTGAAGGAGGTAGAAGGCA+GGG | + | chr7_2:63038283-63038302 | Msa1068040:CDS | 45.0% | |
| ! | TCGAGCAACTTGGTGGAAAT+TGG | + | chr7_2:63038337-63038356 | Msa1068040:CDS | 45.0% |
| ! | ACTTGGTGGAAATTGGTGTG+TGG | + | chr7_2:63038344-63038363 | Msa1068040:CDS | 45.0% |
| CTTGGTGGAAATTGGTGTGT+GGG | + | chr7_2:63038345-63038364 | Msa1068040:CDS | 45.0% | |
| TTGGTGGAAATTGGTGTGTG+GGG | + | chr7_2:63038346-63038365 | Msa1068040:CDS | 45.0% | |
| GGGGACGTGATACTTCTTAT+GGG | + | chr7_2:63038366-63038385 | Msa1068040:CDS | 45.0% | |
| CAGTGAGTTGTAGATTGCCT+TGG | + | chr7_2:63038435-63038454 | Msa1068040:intron | 45.0% | |
| GAGTTGTAGATTGCCTTGGA+AGG | + | chr7_2:63038439-63038458 | Msa1068040:intron | 45.0% | |
| CTAGGAAAGACAACCTTCCA+AGG | - | chr7_2:63038455-63038474 | None:intergenic | 45.0% | |
| TAAAGAGGCAAGAGGGTAGT+TGG | + | chr7_2:63038496-63038515 | Msa1068040:intron | 45.0% | |
| ! | CAAGAGGGTAGTTGGATTAG+TGG | + | chr7_2:63038504-63038523 | Msa1068040:CDS | 45.0% |
| AAGCTATTGTTGGCGGTCTT+GGG | + | chr7_2:63038591-63038610 | Msa1068040:CDS | 45.0% | |
| !! | GAAAAGCCGGTTTGCTTGAT+CGG | + | chr7_2:63036919-63036938 | Msa1068040:CDS | 45.0% |
| !! | TGATCGGATCGGTGTTGAAA+AGG | + | chr7_2:63036935-63036954 | Msa1068040:CDS | 45.0% |
| !! | GATCGGATCGGTGTTGAAAA+GGG | + | chr7_2:63036936-63036955 | Msa1068040:CDS | 45.0% |
| ! | GCATCCAAAGATCCCTTTTG+AGG | + | chr7_2:63037040-63037059 | Msa1068040:CDS | 45.0% |
| TCACCGAGCACAAGTTAGTT+TGG | - | chr7_2:63037682-63037701 | None:intergenic | 45.0% | |
| AAATCCACGGCAATGAGGTT+TGG | + | chr7_2:63037713-63037732 | Msa1068040:intron | 45.0% | |
| TTTACCAAACCTCATTGCCG+TGG | - | chr7_2:63037720-63037739 | None:intergenic | 45.0% | |
| CTACTGAACTTAACCACCAC+CGG | - | chr7_2:63037842-63037861 | None:intergenic | 45.0% | |
| AGCTTTCCACGTAACCTTAG+AGG | + | chr7_2:63037956-63037975 | Msa1068040:intron | 45.0% | |
| !! | CACAATCCTCTAAGGTTACG+TGG | - | chr7_2:63037965-63037984 | None:intergenic | 45.0% |
| TTGTGGGTCACAATCCTCTA+AGG | - | chr7_2:63037973-63037992 | None:intergenic | 45.0% | |
| ! | TATCACTGCCCAGTAGCTTT+TGG | - | chr7_2:63038092-63038111 | None:intergenic | 45.0% |
| TTTGAAGGAGGTAGAAGGCA+GGG | + | chr7_2:63038283-63038302 | Msa1068040:CDS | 45.0% | |
| ! | TCGAGCAACTTGGTGGAAAT+TGG | + | chr7_2:63038337-63038356 | Msa1068040:CDS | 45.0% |
| ! | ACTTGGTGGAAATTGGTGTG+TGG | + | chr7_2:63038344-63038363 | Msa1068040:CDS | 45.0% |
| CTTGGTGGAAATTGGTGTGT+GGG | + | chr7_2:63038345-63038364 | Msa1068040:CDS | 45.0% | |
| TTGGTGGAAATTGGTGTGTG+GGG | + | chr7_2:63038346-63038365 | Msa1068040:CDS | 45.0% | |
| GGGGACGTGATACTTCTTAT+GGG | + | chr7_2:63038366-63038385 | Msa1068040:CDS | 45.0% | |
| CAGTGAGTTGTAGATTGCCT+TGG | + | chr7_2:63038435-63038454 | Msa1068040:intron | 45.0% | |
| GAGTTGTAGATTGCCTTGGA+AGG | + | chr7_2:63038439-63038458 | Msa1068040:intron | 45.0% | |
| CTAGGAAAGACAACCTTCCA+AGG | - | chr7_2:63038455-63038474 | None:intergenic | 45.0% | |
| TAAAGAGGCAAGAGGGTAGT+TGG | + | chr7_2:63038496-63038515 | Msa1068040:intron | 45.0% | |
| ! | CAAGAGGGTAGTTGGATTAG+TGG | + | chr7_2:63038504-63038523 | Msa1068040:CDS | 45.0% |
| AAGCTATTGTTGGCGGTCTT+GGG | + | chr7_2:63038591-63038610 | Msa1068040:CDS | 45.0% | |
| ! | AGCGAAGCCAAAGAAGCACA+CGG | + | chr7_2:63036845-63036864 | Msa1068040:CDS | 50.0% |
| ACCGATCCGATCAAGCAAAC+CGG | - | chr7_2:63036928-63036947 | None:intergenic | 50.0% | |
| ! | GCGCTGTGATTTTGCAGTGA+GGG | - | chr7_2:63036983-63037002 | None:intergenic | 50.0% |
| TGAGACTACCACGAACACCA+GGG | - | chr7_2:63037127-63037146 | None:intergenic | 50.0% | |
| TTGAGACTACCACGAACACC+AGG | - | chr7_2:63037128-63037147 | None:intergenic | 50.0% | |
| TTTCGGCTGGGCTTAGGTTA+TGG | + | chr7_2:63037780-63037799 | Msa1068040:intron | 50.0% | |
| TTCGGCTGGGCTTAGGTTAT+GGG | + | chr7_2:63037781-63037800 | Msa1068040:intron | 50.0% | |
| GTTGACTGCGCAGCTACAAA+AGG | - | chr7_2:63037815-63037834 | None:intergenic | 50.0% | |
| ! | GAACTTAACCACCACCGGTT+TGG | - | chr7_2:63037837-63037856 | None:intergenic | 50.0% |
| GTTGACTGCGCAGCTACAAA+AGG | - | chr7_2:63037815-63037834 | None:intergenic | 50.0% | |
| CTACTGAACTTAACCGCCAC+CGG | - | chr7_2:63037912-63037931 | None:intergenic | 50.0% | |
| GGTTACGTGGAAAGCTACAC+TGG | - | chr7_2:63037952-63037971 | None:intergenic | 50.0% | |
| ATGTACGGTGGTAGCAAAGG+TGG | + | chr7_2:63038247-63038266 | Msa1068040:intron | 50.0% | |
| ! | GGCTCTTTGAAGGAGGTAGA+AGG | + | chr7_2:63038278-63038297 | Msa1068040:CDS | 50.0% |
| ! | CTTTGAAGGAGGTAGAAGGC+AGG | + | chr7_2:63038282-63038301 | Msa1068040:CDS | 50.0% |
| TTTGTGGTCGAGCAACTTGG+TGG | + | chr7_2:63038330-63038349 | Msa1068040:CDS | 50.0% | |
| TGGTGGAAATTGGTGTGTGG+GGG | + | chr7_2:63038347-63038366 | Msa1068040:CDS | 50.0% | |
| GGGGGACGTGATACTTCTTA+TGG | + | chr7_2:63038365-63038384 | Msa1068040:CDS | 50.0% | |
| ! | GGATTAGTGGTCATTGGGTG+TGG | + | chr7_2:63038517-63038536 | Msa1068040:CDS | 50.0% |
| GAAGCTATTGTTGGCGGTCT+TGG | + | chr7_2:63038590-63038609 | Msa1068040:CDS | 50.0% | |
| ! | AGCGAAGCCAAAGAAGCACA+CGG | + | chr7_2:63036845-63036864 | Msa1068040:CDS | 50.0% |
| ACCGATCCGATCAAGCAAAC+CGG | - | chr7_2:63036928-63036947 | None:intergenic | 50.0% | |
| ! | GCGCTGTGATTTTGCAGTGA+GGG | - | chr7_2:63036983-63037002 | None:intergenic | 50.0% |
| TGAGACTACCACGAACACCA+GGG | - | chr7_2:63037127-63037146 | None:intergenic | 50.0% | |
| TTGAGACTACCACGAACACC+AGG | - | chr7_2:63037128-63037147 | None:intergenic | 50.0% | |
| TTTCGGCTGGGCTTAGGTTA+TGG | + | chr7_2:63037780-63037799 | Msa1068040:intron | 50.0% | |
| TTCGGCTGGGCTTAGGTTAT+GGG | + | chr7_2:63037781-63037800 | Msa1068040:intron | 50.0% | |
| GTTGACTGCGCAGCTACAAA+AGG | - | chr7_2:63037815-63037834 | None:intergenic | 50.0% | |
| ! | GAACTTAACCACCACCGGTT+TGG | - | chr7_2:63037837-63037856 | None:intergenic | 50.0% |
| GTTGACTGCGCAGCTACAAA+AGG | - | chr7_2:63037815-63037834 | None:intergenic | 50.0% | |
| CTACTGAACTTAACCGCCAC+CGG | - | chr7_2:63037912-63037931 | None:intergenic | 50.0% | |
| GGTTACGTGGAAAGCTACAC+TGG | - | chr7_2:63037952-63037971 | None:intergenic | 50.0% | |
| ATGTACGGTGGTAGCAAAGG+TGG | + | chr7_2:63038247-63038266 | Msa1068040:intron | 50.0% | |
| ! | GGCTCTTTGAAGGAGGTAGA+AGG | + | chr7_2:63038278-63038297 | Msa1068040:CDS | 50.0% |
| ! | CTTTGAAGGAGGTAGAAGGC+AGG | + | chr7_2:63038282-63038301 | Msa1068040:CDS | 50.0% |
| TTTGTGGTCGAGCAACTTGG+TGG | + | chr7_2:63038330-63038349 | Msa1068040:CDS | 50.0% | |
| TGGTGGAAATTGGTGTGTGG+GGG | + | chr7_2:63038347-63038366 | Msa1068040:CDS | 50.0% | |
| GGGGGACGTGATACTTCTTA+TGG | + | chr7_2:63038365-63038384 | Msa1068040:CDS | 50.0% | |
| ! | GGATTAGTGGTCATTGGGTG+TGG | + | chr7_2:63038517-63038536 | Msa1068040:CDS | 50.0% |
| GAAGCTATTGTTGGCGGTCT+TGG | + | chr7_2:63038590-63038609 | Msa1068040:CDS | 50.0% | |
| TCCTTCGCCGTGTGCTTCTT+TGG | - | chr7_2:63036855-63036874 | None:intergenic | 55.0% | |
| GATCCAAGCCAAGGTTGACG+CGG | + | chr7_2:63036875-63036894 | Msa1068040:CDS | 55.0% | |
| !! | GCCGGTTTGCTTGATCGGAT+CGG | + | chr7_2:63036924-63036943 | Msa1068040:CDS | 55.0% |
| !! | CGGATCGGTGTTGAAAAGGG+TGG | + | chr7_2:63036939-63036958 | Msa1068040:CDS | 55.0% |
| AAAAGGGTGGACACGCCAAG+TGG | + | chr7_2:63036952-63036971 | Msa1068040:CDS | 55.0% | |
| AAAGGGTGGACACGCCAAGT+GGG | + | chr7_2:63036953-63036972 | Msa1068040:CDS | 55.0% | |
| ! | GGCGCTGTGATTTTGCAGTG+AGG | - | chr7_2:63036984-63037003 | None:intergenic | 55.0% |
| TCCGCGTTAGCTCAAAACCG+AGG | + | chr7_2:63037626-63037645 | Msa1068040:intron | 55.0% | |
| !!! | GCCTCGGTTTTGAGCTAACG+CGG | - | chr7_2:63037630-63037649 | None:intergenic | 55.0% |
| !!! | GTTGGTTTTCGGCTGGGCTT+AGG | + | chr7_2:63037774-63037793 | Msa1068040:intron | 55.0% |
| TCGGCTGGGCTTAGGTTATG+GGG | + | chr7_2:63037782-63037801 | Msa1068040:intron | 55.0% | |
| AGCTGCGCAGTCAACCAAAC+CGG | + | chr7_2:63037820-63037839 | Msa1068040:intron | 55.0% | |
| AGCTGCGCAGTCAACCAAAC+CGG | + | chr7_2:63037820-63037839 | Msa1068040:intron | 55.0% | |
| ! | GAACTTAACCGCCACCGGTT+TGG | - | chr7_2:63037907-63037926 | None:intergenic | 55.0% |
| TACGGTGGTAGCAAAGGTGG+TGG | + | chr7_2:63038250-63038269 | Msa1068040:intron | 55.0% | |
| ACGGTGGTAGCAAAGGTGGT+GGG | + | chr7_2:63038251-63038270 | Msa1068040:intron | 55.0% | |
| AAGGAGGTAGAAGGCAGGGT+TGG | + | chr7_2:63038287-63038306 | Msa1068040:CDS | 55.0% | |
| !! | GAAGGTGGTGGAAGGCTTTG+TGG | + | chr7_2:63038314-63038333 | Msa1068040:CDS | 55.0% |
| ! | GGCTTTGTGGTCGAGCAACT+TGG | + | chr7_2:63038327-63038346 | Msa1068040:CDS | 55.0% |
| GTGGTCATTGGGTGTGGAGT+TGG | + | chr7_2:63038523-63038542 | Msa1068040:CDS | 55.0% | |
| GTCATTGGGTGTGGAGTTGG+CGG | + | chr7_2:63038526-63038545 | Msa1068040:CDS | 55.0% | |
| GTGGAGGAAGCCGTTTGCAT+GGG | + | chr7_2:63038548-63038567 | Msa1068040:CDS | 55.0% | |
| TCCTTCGCCGTGTGCTTCTT+TGG | - | chr7_2:63036855-63036874 | None:intergenic | 55.0% | |
| GATCCAAGCCAAGGTTGACG+CGG | + | chr7_2:63036875-63036894 | Msa1068040:CDS | 55.0% | |
| !! | GCCGGTTTGCTTGATCGGAT+CGG | + | chr7_2:63036924-63036943 | Msa1068040:CDS | 55.0% |
| !! | CGGATCGGTGTTGAAAAGGG+TGG | + | chr7_2:63036939-63036958 | Msa1068040:CDS | 55.0% |
| AAAAGGGTGGACACGCCAAG+TGG | + | chr7_2:63036952-63036971 | Msa1068040:CDS | 55.0% | |
| AAAGGGTGGACACGCCAAGT+GGG | + | chr7_2:63036953-63036972 | Msa1068040:CDS | 55.0% | |
| ! | GGCGCTGTGATTTTGCAGTG+AGG | - | chr7_2:63036984-63037003 | None:intergenic | 55.0% |
| TCCGCGTTAGCTCAAAACCG+AGG | + | chr7_2:63037626-63037645 | Msa1068040:intron | 55.0% | |
| !!! | GCCTCGGTTTTGAGCTAACG+CGG | - | chr7_2:63037630-63037649 | None:intergenic | 55.0% |
| !!! | GTTGGTTTTCGGCTGGGCTT+AGG | + | chr7_2:63037774-63037793 | Msa1068040:intron | 55.0% |
| TCGGCTGGGCTTAGGTTATG+GGG | + | chr7_2:63037782-63037801 | Msa1068040:intron | 55.0% | |
| AGCTGCGCAGTCAACCAAAC+CGG | + | chr7_2:63037820-63037839 | Msa1068040:intron | 55.0% | |
| AGCTGCGCAGTCAACCAAAC+CGG | + | chr7_2:63037820-63037839 | Msa1068040:intron | 55.0% | |
| ! | GAACTTAACCGCCACCGGTT+TGG | - | chr7_2:63037907-63037926 | None:intergenic | 55.0% |
| TACGGTGGTAGCAAAGGTGG+TGG | + | chr7_2:63038250-63038269 | Msa1068040:intron | 55.0% | |
| ACGGTGGTAGCAAAGGTGGT+GGG | + | chr7_2:63038251-63038270 | Msa1068040:intron | 55.0% | |
| AAGGAGGTAGAAGGCAGGGT+TGG | + | chr7_2:63038287-63038306 | Msa1068040:CDS | 55.0% | |
| !! | GAAGGTGGTGGAAGGCTTTG+TGG | + | chr7_2:63038314-63038333 | Msa1068040:CDS | 55.0% |
| ! | GGCTTTGTGGTCGAGCAACT+TGG | + | chr7_2:63038327-63038346 | Msa1068040:CDS | 55.0% |
| GTGGTCATTGGGTGTGGAGT+TGG | + | chr7_2:63038523-63038542 | Msa1068040:CDS | 55.0% | |
| GTCATTGGGTGTGGAGTTGG+CGG | + | chr7_2:63038526-63038545 | Msa1068040:CDS | 55.0% | |
| GTGGAGGAAGCCGTTTGCAT+GGG | + | chr7_2:63038548-63038567 | Msa1068040:CDS | 55.0% | |
| ! | GCCAAAGAAGCACACGGCGA+AGG | + | chr7_2:63036851-63036870 | Msa1068040:CDS | 60.0% |
| GGCGAAGGAGATCCAAGCCA+AGG | + | chr7_2:63036866-63036885 | Msa1068040:CDS | 60.0% | |
| AATCGCGGCGGAGGAAAAGC+CGG | + | chr7_2:63036906-63036925 | Msa1068040:CDS | 60.0% | |
| CGAGGCTTGGAGGATTCAGC+AGG | - | chr7_2:63037104-63037123 | None:intergenic | 60.0% | |
| TGCGCAGTCAACCAAACCGG+TGG | + | chr7_2:63037823-63037842 | Msa1068040:intron | 60.0% | |
| GCAGTCAACCAAACCGGTGG+TGG | + | chr7_2:63037826-63037845 | Msa1068040:intron | 60.0% | |
| TGCGCAGTCAACCAAACCGG+TGG | + | chr7_2:63037823-63037842 | Msa1068040:intron | 60.0% | |
| GCAGTCAACCAAACCGGTGG+CGG | + | chr7_2:63037826-63037845 | Msa1068040:intron | 60.0% | |
| !! | GTGGTAGCAAAGGTGGTGGG+AGG | + | chr7_2:63038254-63038273 | Msa1068040:intron | 60.0% |
| !! | GTAGCAAAGGTGGTGGGAGG+TGG | + | chr7_2:63038257-63038276 | Msa1068040:intron | 60.0% |
| GGTGGGAGGTGGCTCTTTGA+AGG | + | chr7_2:63038268-63038287 | Msa1068040:CDS | 60.0% | |
| ! | GGGAGGTGGCTCTTTGAAGG+AGG | + | chr7_2:63038271-63038290 | Msa1068040:CDS | 60.0% |
| GAGGTAGAAGGCAGGGTTGG+TGG | + | chr7_2:63038290-63038309 | Msa1068040:CDS | 60.0% | |
| !! | TTGGTGGCGAAGGTGGTGGA+AGG | + | chr7_2:63038306-63038325 | Msa1068040:CDS | 60.0% |
| ATTGGGTGTGGAGTTGGCGG+TGG | + | chr7_2:63038529-63038548 | Msa1068040:CDS | 60.0% | |
| GGTGGAGGAAGCCGTTTGCA+TGG | + | chr7_2:63038547-63038566 | Msa1068040:CDS | 60.0% | |
| ! | GCCAAAGAAGCACACGGCGA+AGG | + | chr7_2:63036851-63036870 | Msa1068040:CDS | 60.0% |
| GGCGAAGGAGATCCAAGCCA+AGG | + | chr7_2:63036866-63036885 | Msa1068040:CDS | 60.0% | |
| AATCGCGGCGGAGGAAAAGC+CGG | + | chr7_2:63036906-63036925 | Msa1068040:CDS | 60.0% | |
| CGAGGCTTGGAGGATTCAGC+AGG | - | chr7_2:63037104-63037123 | None:intergenic | 60.0% | |
| TGCGCAGTCAACCAAACCGG+TGG | + | chr7_2:63037823-63037842 | Msa1068040:intron | 60.0% | |
| GCAGTCAACCAAACCGGTGG+TGG | + | chr7_2:63037826-63037845 | Msa1068040:intron | 60.0% | |
| TGCGCAGTCAACCAAACCGG+TGG | + | chr7_2:63037823-63037842 | Msa1068040:intron | 60.0% | |
| GCAGTCAACCAAACCGGTGG+CGG | + | chr7_2:63037826-63037845 | Msa1068040:intron | 60.0% | |
| !! | GTGGTAGCAAAGGTGGTGGG+AGG | + | chr7_2:63038254-63038273 | Msa1068040:intron | 60.0% |
| !! | GTAGCAAAGGTGGTGGGAGG+TGG | + | chr7_2:63038257-63038276 | Msa1068040:intron | 60.0% |
| GGTGGGAGGTGGCTCTTTGA+AGG | + | chr7_2:63038268-63038287 | Msa1068040:CDS | 60.0% | |
| ! | GGGAGGTGGCTCTTTGAAGG+AGG | + | chr7_2:63038271-63038290 | Msa1068040:CDS | 60.0% |
| GAGGTAGAAGGCAGGGTTGG+TGG | + | chr7_2:63038290-63038309 | Msa1068040:CDS | 60.0% | |
| !! | TTGGTGGCGAAGGTGGTGGA+AGG | + | chr7_2:63038306-63038325 | Msa1068040:CDS | 60.0% |
| ATTGGGTGTGGAGTTGGCGG+TGG | + | chr7_2:63038529-63038548 | Msa1068040:CDS | 60.0% | |
| GGTGGAGGAAGCCGTTTGCA+TGG | + | chr7_2:63038547-63038566 | Msa1068040:CDS | 60.0% | |
| !! | GCAGTGAGGGCACTCCCACT+TGG | - | chr7_2:63036970-63036989 | None:intergenic | 65.0% |
| GAATCCTCCAAGCCTCGCCC+TGG | + | chr7_2:63037107-63037126 | Msa1068040:CDS | 65.0% | |
| AACACCAGGGCGAGGCTTGG+AGG | - | chr7_2:63037114-63037133 | None:intergenic | 65.0% | |
| ACGAACACCAGGGCGAGGCT+TGG | - | chr7_2:63037117-63037136 | None:intergenic | 65.0% | |
| AAGCCTCGCCCTGGTGTTCG+TGG | + | chr7_2:63037116-63037135 | Msa1068040:CDS | 65.0% | |
| CTACCACGAACACCAGGGCG+AGG | - | chr7_2:63037122-63037141 | None:intergenic | 65.0% | |
| !! | GAAGGCAGGGTTGGTGGCGA+AGG | + | chr7_2:63038296-63038315 | Msa1068040:CDS | 65.0% |
| !! | AGGGTTGGTGGCGAAGGTGG+TGG | + | chr7_2:63038302-63038321 | Msa1068040:CDS | 65.0% |
| !! | GCAGTGAGGGCACTCCCACT+TGG | - | chr7_2:63036970-63036989 | None:intergenic | 65.0% |
| GAATCCTCCAAGCCTCGCCC+TGG | + | chr7_2:63037107-63037126 | Msa1068040:CDS | 65.0% | |
| AACACCAGGGCGAGGCTTGG+AGG | - | chr7_2:63037114-63037133 | None:intergenic | 65.0% | |
| ACGAACACCAGGGCGAGGCT+TGG | - | chr7_2:63037117-63037136 | None:intergenic | 65.0% | |
| AAGCCTCGCCCTGGTGTTCG+TGG | + | chr7_2:63037116-63037135 | Msa1068040:CDS | 65.0% | |
| CTACCACGAACACCAGGGCG+AGG | - | chr7_2:63037122-63037141 | None:intergenic | 65.0% | |
| !! | GAAGGCAGGGTTGGTGGCGA+AGG | + | chr7_2:63038296-63038315 | Msa1068040:CDS | 65.0% |
| !! | AGGGTTGGTGGCGAAGGTGG+TGG | + | chr7_2:63038302-63038321 | Msa1068040:CDS | 65.0% |
| GCGCCGCGTCAACCTTGGCT+TGG | - | chr7_2:63036881-63036900 | None:intergenic | 70.0% | |
| CGTCAGCGCCGCGTCAACCT+TGG | - | chr7_2:63036886-63036905 | None:intergenic | 70.0% | |
| !! | GACGCGGCGCTGACGAATCG+CGG | + | chr7_2:63036891-63036910 | Msa1068040:CDS | 70.0% |
| !! | GGCAGGGTTGGTGGCGAAGG+TGG | + | chr7_2:63038299-63038318 | Msa1068040:CDS | 70.0% |
| GGGTGTGGAGTTGGCGGTGG+AGG | + | chr7_2:63038532-63038551 | Msa1068040:CDS | 70.0% | |
| GCGCCGCGTCAACCTTGGCT+TGG | - | chr7_2:63036881-63036900 | None:intergenic | 70.0% | |
| CGTCAGCGCCGCGTCAACCT+TGG | - | chr7_2:63036886-63036905 | None:intergenic | 70.0% | |
| !! | GACGCGGCGCTGACGAATCG+CGG | + | chr7_2:63036891-63036910 | Msa1068040:CDS | 70.0% |
| !! | GGCAGGGTTGGTGGCGAAGG+TGG | + | chr7_2:63038299-63038318 | Msa1068040:CDS | 70.0% |
| GGGTGTGGAGTTGGCGGTGG+AGG | + | chr7_2:63038532-63038551 | Msa1068040:CDS | 70.0% | |
| !! | GCGGCGCTGACGAATCGCGG+CGG | + | chr7_2:63036894-63036913 | Msa1068040:CDS | 75.0% |
| ! | GCGCTGACGAATCGCGGCGG+AGG | + | chr7_2:63036897-63036916 | Msa1068040:CDS | 75.0% |
| !! | GCGGCGCTGACGAATCGCGG+CGG | + | chr7_2:63036894-63036913 | Msa1068040:CDS | 75.0% |
| ! | GCGCTGACGAATCGCGGCGG+AGG | + | chr7_2:63036897-63036916 | Msa1068040:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 63036834 | 63038623 | 63036834 | ID=Msa1068040;Name=Msa1068040 |
| chr7_2 | mRNA | 63036834 | 63038623 | 63036834 | ID=Msa1068040-mRNA-1;Parent=Msa1068040;Name=Msa1068040-mRNA-1;_AED=0.08;_eAED=0.25;_QI=0|0|0|1|1|1|3|0|193 |
| chr7_2 | exon | 63036834 | 63037137 | 63036834 | ID=Msa1068040-mRNA-1:exon:12902;Parent=Msa1068040-mRNA-1 |
| chr7_2 | exon | 63038261 | 63038415 | 63038261 | ID=Msa1068040-mRNA-1:exon:12903;Parent=Msa1068040-mRNA-1 |
| chr7_2 | exon | 63038501 | 63038623 | 63038501 | ID=Msa1068040-mRNA-1:exon:12904;Parent=Msa1068040-mRNA-1 |
| chr7_2 | CDS | 63036834 | 63037137 | 63036834 | ID=Msa1068040-mRNA-1:cds;Parent=Msa1068040-mRNA-1 |
| chr7_2 | CDS | 63038261 | 63038415 | 63038261 | ID=Msa1068040-mRNA-1:cds;Parent=Msa1068040-mRNA-1 |
| chr7_2 | CDS | 63038501 | 63038623 | 63038501 | ID=Msa1068040-mRNA-1:cds;Parent=Msa1068040-mRNA-1 |
| Gene Sequence |
| Protein sequence |
