Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1029380 | ABN05929.1 | 41.784 | 213 | 114 | 8 | 144 | 352 | 1 | 207 | 6.22e-31 | 127 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1029380 | A2Q1W2 | 41.784 | 213 | 114 | 8 | 144 | 352 | 1 | 207 | 2.97e-31 | 127 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1029380 | Msa1029390 | 0.813991 | 1.933878e-51 | -8.615850e-47 |
| Msa1029380 | Msa1068240 | 0.955880 | 1.089025e-113 | -8.615850e-47 |
| Msa1029380 | Msa1068250 | 0.803326 | 3.677943e-49 | -8.615850e-47 |
| Msa1029380 | Msa1156380 | 0.918480 | 1.479734e-86 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1029380 | MtrunA17_Chr7g0250191 | 41.784 | 213 | 114 | 8 | 144 | 352 | 1 | 207 | 5.72e-35 | 127 |
| Msa1029380 | MtrunA17_Chr7g0250171 | 40.104 | 192 | 105 | 5 | 146 | 332 | 92 | 278 | 3.26e-30 | 117 |
| Msa1029380 | MtrunA17_Chr7g0225921 | 42.857 | 126 | 64 | 5 | 26 | 144 | 1 | 125 | 2.66e-16 | 75.1 |
| Msa1029380 | MtrunA17_Chr6g0459231 | 42.222 | 90 | 49 | 2 | 26 | 113 | 3 | 91 | 6.56e-13 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 96 sgRNAs with CRISPR-Local
Find 271 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATATGCTACCTTATAAAT+TGG | 0.194854 | 7_1:-62829127 | Msa1029380:CDS |
| GGGTTTCTACTGACATTATT+TGG | 0.199993 | 7_1:-62829302 | Msa1029380:CDS |
| GTACTGTTTGTGGTTATTTC+AGG | 0.218791 | 7_1:+62829224 | None:intergenic |
| TTCAGTTACTTTGATGTAAA+TGG | 0.224758 | 7_1:-62829997 | Msa1029380:CDS |
| GCGGTGATTTGCGCAATTTC+TGG | 0.233947 | 7_1:+62829155 | None:intergenic |
| AAGCTGATGCCTTGCGTAAC+AGG | 0.279171 | 7_1:+62829021 | None:intergenic |
| TTTGTAACTTCAGTGGCTTT+TGG | 0.337238 | 7_1:-62828945 | Msa1029380:CDS |
| AAATGGGCTCCGGTGGTAAT+CGG | 0.343364 | 7_1:-62832754 | Msa1029380:CDS |
| CAACTAGAATCCAATTTATA+AGG | 0.347305 | 7_1:+62829117 | None:intergenic |
| CCACCGGAGCCCATTTCCTT+TGG | 0.348978 | 7_1:+62832761 | None:intergenic |
| AGTCTCTGTAGCATGCTTGC+TGG | 0.352137 | 7_1:-62829582 | Msa1029380:CDS |
| CCACTAGTTTCCAAAGGAAA+TGG | 0.353353 | 7_1:-62832771 | Msa1029380:exon |
| CCCATGTTCGCGTGGCGAAA+TGG | 0.354518 | 7_1:+62829322 | None:intergenic |
| CTTGCTCCTCTTCAGGCAAA+TGG | 0.379382 | 7_1:-62829446 | Msa1029380:intron |
| CGAGGGAACAAGGAAGATAA+AGG | 0.383866 | 7_1:-62829826 | Msa1029380:CDS |
| TGTACCATTCCTCTACTTCC+CGG | 0.384557 | 7_1:-62829045 | Msa1029380:CDS |
| GTTTGTGGTTATTTCAGGTT+GGG | 0.384684 | 7_1:+62829229 | None:intergenic |
| CATTGCTCGTTCTTTATGTC+AGG | 0.401081 | 7_1:-62828896 | Msa1029380:CDS |
| AGTAAGCGTAAAAGATGAAA+TGG | 0.405844 | 7_1:+62832924 | None:intergenic |
| TCCATTTCGCCACGCGAACA+TGG | 0.411223 | 7_1:-62829323 | Msa1029380:CDS |
| GTTATCTGTGGAGGATTTAG+AGG | 0.411714 | 7_1:-62829917 | Msa1029380:CDS |
| GTCTCTGTAGCATGCTTGCT+GGG | 0.411876 | 7_1:-62829581 | Msa1029380:CDS |
| AATGGGCTCCGGTGGTAATC+GGG | 0.412290 | 7_1:-62832753 | Msa1029380:CDS |
| TCATCTTGAGTACTTATTGT+TGG | 0.412372 | 7_1:+62828855 | None:intergenic |
| GCTAAATTGTTAGAAGATAC+AGG | 0.420133 | 7_1:+62829404 | None:intergenic |
| TACTCAAGATGAGGTTGTCC+TGG | 0.433902 | 7_1:-62828844 | Msa1029380:CDS |
| ACTCCTAAGAAAATTCTTCA+AGG | 0.447232 | 7_1:+62829352 | None:intergenic |
| TAAGCACGGTGTAATTATAC+AGG | 0.447737 | 7_1:-62828712 | Msa1029380:three_prime_UTR |
| TAAGCACGGTGTAATTATAC+AGG | 0.447737 | 7_1:-62828789 | Msa1029380:three_prime_UTR |
| TATAACTGCAATTAGGTTGT+TGG | 0.450790 | 7_1:-62830222 | Msa1029380:intron |
| CTAGACGGTGATGAACTGTT+GGG | 0.455821 | 7_1:-62829880 | Msa1029380:CDS |
| TGTTTGTGGTTATTTCAGGT+TGG | 0.464613 | 7_1:+62829228 | None:intergenic |
| GAAGTTACAAATGCAATAAG+AGG | 0.465364 | 7_1:+62828957 | None:intergenic |
| CACTAGTTTCCAAAGGAAAT+GGG | 0.471861 | 7_1:-62832770 | Msa1029380:exon |
| TATTGCATTTGTAACTTCAG+TGG | 0.472514 | 7_1:-62828952 | Msa1029380:CDS |
| TCAGGTTGGGACTGATCAAA+TGG | 0.477463 | 7_1:+62829242 | None:intergenic |
| CCATTTCGCCACGCGAACAT+GGG | 0.483035 | 7_1:-62829322 | Msa1029380:CDS |
| ATGCCTTGCGTAACAGGTCC+GGG | 0.487951 | 7_1:+62829027 | None:intergenic |
| GATGCTTCATGAGGTTATCC+TGG | 0.494541 | 7_1:-62828767 | Msa1029380:three_prime_UTR |
| TAAAGGGCAAAGCTTTAAAG+AGG | 0.495939 | 7_1:-62829809 | Msa1029380:CDS |
| AGTTACCATGGTGAGTGAAA+AGG | 0.506430 | 7_1:+62832896 | None:intergenic |
| CTTACAGGTTTCCGTTCCAC+CGG | 0.510555 | 7_1:-62829646 | Msa1029380:intron |
| CCATTTCCTTTGGAAACTAG+TGG | 0.512766 | 7_1:+62832771 | None:intergenic |
| GGATGATTGGTGTCAAGAAA+TGG | 0.517269 | 7_1:+62832945 | None:intergenic |
| CGGAGATTTGTGGAAGCTCG+AGG | 0.524244 | 7_1:-62829844 | Msa1029380:CDS |
| CCTCCACAGATAACTCCTCA+TGG | 0.528422 | 7_1:+62829926 | None:intergenic |
| TCTAGACGGTGATGAACTGT+TGG | 0.531424 | 7_1:-62829881 | Msa1029380:CDS |
| TAAAAGATGAAATGGATGAT+TGG | 0.532647 | 7_1:+62832932 | None:intergenic |
| GGAGGATTTAGAGGCGGTTG+AGG | 0.533575 | 7_1:-62829908 | Msa1029380:CDS |
| TTTCCAAAGGAAATGGGCTC+CGG | 0.535403 | 7_1:-62832764 | Msa1029380:exon |
| AAGAAATGGTGCTCTGCACT+AGG | 0.537224 | 7_1:+62832959 | None:intergenic |
| GCAATTAGGTTGTTGGCCGT+TGG | 0.539578 | 7_1:-62830215 | Msa1029380:intron |
| TGAGTGTGGTGTACTGTTTG+TGG | 0.544187 | 7_1:+62829214 | None:intergenic |
| CGTTCAAATCATCCTCATCC+AGG | 0.544881 | 7_1:+62828826 | None:intergenic |
| CTTTATGTCAGGTTACTCCA+TGG | 0.545073 | 7_1:-62828885 | Msa1029380:CDS |
| TGTTCAAATCATCCTCATCC+AGG | 0.548909 | 7_1:+62828749 | None:intergenic |
| GAGGGAACAAGGAAGATAAA+GGG | 0.552009 | 7_1:-62829825 | Msa1029380:CDS |
| CATTTCCTTTGGAAACTAGT+GGG | 0.553010 | 7_1:+62832772 | None:intergenic |
| TTACGCGTTCATGTGGCTTG+CGG | 0.554497 | 7_1:-62828999 | Msa1029380:CDS |
| TGTGGAAGCTCGAGGGAACA+AGG | 0.565881 | 7_1:-62829836 | Msa1029380:CDS |
| CTTAACCCACTAGTTTCCAA+AGG | 0.565900 | 7_1:-62832777 | Msa1029380:intron |
| ATCAGCTTTACGCGTTCATG+TGG | 0.567312 | 7_1:-62829006 | Msa1029380:CDS |
| TGCCACTAGCACTTAGACTG+CGG | 0.573207 | 7_1:-62829094 | Msa1029380:CDS |
| CCAAAGGAAATGGGCTCCGG+TGG | 0.579203 | 7_1:-62832761 | Msa1029380:exon |
| ATCAACCTCCCGATTACCAC+CGG | 0.581587 | 7_1:+62832745 | None:intergenic |
| AACAATAAGTACTCAAGATG+AGG | 0.587586 | 7_1:-62828853 | Msa1029380:CDS |
| CACAGATAACTCCTCATGGA+TGG | 0.590113 | 7_1:+62829930 | None:intergenic |
| AGATACAGGAAGAACATCGT+TGG | 0.591251 | 7_1:+62829418 | None:intergenic |
| TAGACGGTGATGAACTGTTG+GGG | 0.595417 | 7_1:-62829879 | Msa1029380:CDS |
| TGAATTGCAAAATTGCATGA+AGG | 0.597499 | 7_1:-62829953 | Msa1029380:CDS |
| AGATGAGGTTGTCCTGGATG+AGG | 0.599334 | 7_1:-62828838 | Msa1029380:CDS |
| ATCAAGACCATAACTACACT+CGG | 0.600780 | 7_1:-62832990 | Msa1029380:five_prime_UTR |
| TCATGAGGTTATCCTGGATG+AGG | 0.601123 | 7_1:-62828761 | Msa1029380:three_prime_UTR |
| TTACAGGTTTCCGTTCCACC+GGG | 0.603359 | 7_1:-62829645 | Msa1029380:intron |
| CGGAAGCTTACTAGTGAGTG+TGG | 0.610294 | 7_1:+62829200 | None:intergenic |
| GGAGATTTGTGGAAGCTCGA+GGG | 0.611100 | 7_1:-62829843 | Msa1029380:CDS |
| GCGGTTGAGGCATTTCTAGA+CGG | 0.612643 | 7_1:-62829895 | Msa1029380:CDS |
| TAATCGGGAGGTTGATCAAG+AGG | 0.623522 | 7_1:-62832738 | Msa1029380:intron |
| ATTATACAGGATGCTTCATG+AGG | 0.626242 | 7_1:-62828776 | Msa1029380:three_prime_UTR |
| ATCTGTGGAGGATTTAGAGG+CGG | 0.627233 | 7_1:-62829914 | Msa1029380:CDS |
| CAAATGCAATAAGAGGCAGC+TGG | 0.632451 | 7_1:+62828964 | None:intergenic |
| CAGATGTCTTCGTTTAAGCA+CGG | 0.633417 | 7_1:-62828726 | Msa1029380:three_prime_UTR |
| GTAACAGGTCCGGGAAGTAG+AGG | 0.634533 | 7_1:+62829036 | None:intergenic |
| AGGTCCGGGAAGTAGAGGAA+TGG | 0.634665 | 7_1:+62829041 | None:intergenic |
| AATGGTACATAAAACAAGAG+TGG | 0.636670 | 7_1:+62829059 | None:intergenic |
| CAGATGTCTTCGTTTAAGCA+CGG | 0.638065 | 7_1:-62828803 | Msa1029380:exon |
| AGTAGAAACCCATGTTCGCG+TGG | 0.639401 | 7_1:+62829314 | None:intergenic |
| AGCCGCAGTCTAAGTGCTAG+TGG | 0.639546 | 7_1:+62829092 | None:intergenic |
| CCATGAGGAGTTATCTGTGG+AGG | 0.646843 | 7_1:-62829926 | Msa1029380:CDS |
| CTTCCCGGACCTGTTACGCA+AGG | 0.650567 | 7_1:-62829030 | Msa1029380:CDS |
| GGTACATACATAGAAGAGCA+AGG | 0.665141 | 7_1:+62829551 | None:intergenic |
| GGGCTCCGGTGGTAATCGGG+AGG | 0.679942 | 7_1:-62832750 | Msa1029380:CDS |
| CATCCATGAGGAGTTATCTG+TGG | 0.683615 | 7_1:-62829929 | Msa1029380:CDS |
| TTGGGACTGATCAAATGGAG+TGG | 0.687424 | 7_1:+62829247 | None:intergenic |
| AAGGTAGCATATCATGAATG+CGG | 0.687795 | 7_1:+62829136 | None:intergenic |
| TTGCATGAAGGCCATCCATG+AGG | 0.708194 | 7_1:-62829941 | Msa1029380:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATATTCCTATTATTA+TGG | - | chr7_1:62830033-62830052 | Msa1029380:intron | 10.0% |
| !! | TAATAATAAACCATAATAAT+AGG | + | chr7_1:62830046-62830065 | None:intergenic | 10.0% |
| !! | TTTAAATTTAATTATCATTG+GGG | - | chr7_1:62830292-62830311 | Msa1029380:intron | 10.0% |
| !! | TTAAAATAATATAGAAGAAT+GGG | + | chr7_1:62830979-62830998 | None:intergenic | 10.0% |
| !! | ATTAAAATAATATAGAAGAA+TGG | + | chr7_1:62830980-62830999 | None:intergenic | 10.0% |
| !! | TAAATTAAATTAATGCTTAC+TGG | + | chr7_1:62828987-62829006 | None:intergenic | 15.0% |
| !! | AATTATAATATAGAAGAATG+TGG | + | chr7_1:62829123-62829142 | None:intergenic | 15.0% |
| !! | ATTTGTACCAAAAAAATATA+GGG | + | chr7_1:62829413-62829432 | None:intergenic | 15.0% |
| !! | AATTTGTACCAAAAAAATAT+AGG | + | chr7_1:62829414-62829433 | None:intergenic | 15.0% |
| !! | TTAAATCCATGTTAAAAAAA+TGG | - | chr7_1:62829655-62829674 | Msa1029380:intron | 15.0% |
| !! | TAAATCCATGTTAAAAAAAT+GGG | - | chr7_1:62829656-62829675 | Msa1029380:intron | 15.0% |
| !! | AGAAAAAAAAGTAAAACTAA+TGG | - | chr7_1:62829845-62829864 | Msa1029380:CDS | 15.0% |
| !!! | AAAAAAGTCATTTTTAAAGA+AGG | - | chr7_1:62830108-62830127 | Msa1029380:intron | 15.0% |
| !!! | TCTATATATTTACTTTTCTA+TGG | - | chr7_1:62830331-62830350 | Msa1029380:intron | 15.0% |
| !! | TTCAGAAGTTATTTATTATT+AGG | + | chr7_1:62830449-62830468 | None:intergenic | 15.0% |
| !! | TTCTAAATTTACATGTTTAA+TGG | - | chr7_1:62830507-62830526 | Msa1029380:intron | 15.0% |
| !!! | ATTTTTCAAATTTTGCATTT+TGG | + | chr7_1:62830641-62830660 | None:intergenic | 15.0% |
| !! | TAAAATAATATAGAAGAATG+GGG | + | chr7_1:62830978-62830997 | None:intergenic | 15.0% |
| !!! | ATGTGTTTATTTTATTGATA+TGG | - | chr7_1:62831355-62831374 | Msa1029380:intron | 15.0% |
| !!! | ATTAGTCTCTATAGTTATTT+TGG | - | chr7_1:62829196-62829215 | Msa1029380:CDS | 20.0% |
| !!! | TTAGTCTCTATAGTTATTTT+GGG | - | chr7_1:62829197-62829216 | Msa1029380:CDS | 20.0% |
| !!! | TTTCAATCCCTATATTTTTT+TGG | - | chr7_1:62829403-62829422 | Msa1029380:CDS | 20.0% |
| !!! | TTTGAAATTTCGATATATTG+AGG | - | chr7_1:62829519-62829538 | Msa1029380:intron | 20.0% |
| !! | AATATCAAACAAGAAAAGTA+GGG | + | chr7_1:62829594-62829613 | None:intergenic | 20.0% |
| !! | CTTTGTAAAAAAATTGATCT+TGG | - | chr7_1:62829624-62829643 | Msa1029380:CDS | 20.0% |
| !!! | GTTTTACTTTTTTTTCTTCA+TGG | + | chr7_1:62829842-62829861 | None:intergenic | 20.0% |
| !!! | ACTAATGATATTTTCAACAT+TGG | + | chr7_1:62829942-62829961 | None:intergenic | 20.0% |
| !!! | ATATATTTACTTTTCTATGG+AGG | - | chr7_1:62830334-62830353 | Msa1029380:intron | 20.0% |
| !!! | TTTAATGGATGAAAATTTGA+GGG | - | chr7_1:62830552-62830571 | Msa1029380:intron | 20.0% |
| !!! | TGAAAATTTTGGAAAATTTG+AGG | - | chr7_1:62830614-62830633 | Msa1029380:intron | 20.0% |
| !!! | ATTTGAAATTCCTAGTTTTT+AGG | - | chr7_1:62830676-62830695 | Msa1029380:intron | 20.0% |
| !!! | TTTGTTCAAGTTAAATTTAG+AGG | + | chr7_1:62830715-62830734 | None:intergenic | 20.0% |
| !!! | TTGAAGAATTTTCAAAATGA+TGG | + | chr7_1:62830753-62830772 | None:intergenic | 20.0% |
| !! | AAATTATAGAATGGAAAAAG+TGG | + | chr7_1:62831495-62831514 | None:intergenic | 20.0% |
| !! | TAATAGCACAAATTATAGAA+TGG | + | chr7_1:62831504-62831523 | None:intergenic | 20.0% |
| !! | TATGAACTAATCATGATATA+TGG | - | chr7_1:62831572-62831591 | Msa1029380:intron | 20.0% |
| !! | ATCATGATATATGGTTATTA+TGG | - | chr7_1:62831581-62831600 | Msa1029380:intron | 20.0% |
| ! | TAAAAGATGAAATGGATGAT+TGG | + | chr7_1:62828698-62828717 | None:intergenic | 25.0% |
| ! | TTCGATACTATACACATTTA+CGG | + | chr7_1:62829240-62829259 | None:intergenic | 25.0% |
| ! | GTGATAACTCATTAAACATT+CGG | - | chr7_1:62829549-62829568 | Msa1029380:intron | 25.0% |
| ! | TGATAACTCATTAAACATTC+GGG | - | chr7_1:62829550-62829569 | Msa1029380:intron | 25.0% |
| ! | ATATCAAACAAGAAAAGTAG+GGG | + | chr7_1:62829593-62829612 | None:intergenic | 25.0% |
| ! | CAATATCAAACAAGAAAAGT+AGG | + | chr7_1:62829595-62829614 | None:intergenic | 25.0% |
| !!! | CTACTTTTCTTGTTTGATAT+TGG | - | chr7_1:62829593-62829612 | Msa1029380:CDS | 25.0% |
| !!! | CAATTTTTTTACAAAGTCCA+GGG | + | chr7_1:62829620-62829639 | None:intergenic | 25.0% |
| !!! | TCAATTTTTTTACAAAGTCC+AGG | + | chr7_1:62829621-62829640 | None:intergenic | 25.0% |
| !!! | TTTCTAACGCTTTTTGATAT+CGG | - | chr7_1:62829968-62829987 | Msa1029380:CDS | 25.0% |
| !!! | GTGTATATTTTAACGTAAGA+TGG | - | chr7_1:62830360-62830379 | Msa1029380:intron | 25.0% |
| !!! | ATATTTTAACGTAAGATGGA+AGG | - | chr7_1:62830364-62830383 | Msa1029380:intron | 25.0% |
| ! | TTAAACATATGTCATAAGAG+TGG | + | chr7_1:62830537-62830556 | None:intergenic | 25.0% |
| ! | CTCTTATGACATATGTTTAA+TGG | - | chr7_1:62830537-62830556 | Msa1029380:intron | 25.0% |
| !! | GTTTAATGGATGAAAATTTG+AGG | - | chr7_1:62830551-62830570 | Msa1029380:intron | 25.0% |
| !! | TGGAGTCAATTTGAAAATTT+TGG | - | chr7_1:62830603-62830622 | Msa1029380:intron | 25.0% |
| !!! | GAGATAATGTAATGTTTTGA+GGG | + | chr7_1:62830819-62830838 | None:intergenic | 25.0% |
| !! | TGAGATAATGTAATGTTTTG+AGG | + | chr7_1:62830820-62830839 | None:intergenic | 25.0% |
| !! | AAATTCATTTAGAGTGTGTT+TGG | + | chr7_1:62830857-62830876 | None:intergenic | 25.0% |
| ! | TTCCAAAAGATTAAGTGAAA+GGG | + | chr7_1:62831128-62831147 | None:intergenic | 25.0% |
| ! | ATTCCAAAAGATTAAGTGAA+AGG | + | chr7_1:62831129-62831148 | None:intergenic | 25.0% |
| ! | ACAAAAAAAACTTGCATACA+TGG | - | chr7_1:62831220-62831239 | Msa1029380:intron | 25.0% |
| ! | TTGCTTCAATATCAATTTAG+AGG | + | chr7_1:62831319-62831338 | None:intergenic | 25.0% |
| !! | TTTGAAGTATAACTGCAATT+AGG | - | chr7_1:62831398-62831417 | Msa1029380:intron | 25.0% |
| !!! | CAATTTTTTTACATAGCCAA+CGG | + | chr7_1:62831431-62831450 | None:intergenic | 25.0% |
| ! | ATGAACTAGACTTATAAAGT+TGG | - | chr7_1:62831548-62831567 | Msa1029380:intron | 25.0% |
| ! | ATATATGGTTATTATGGACA+AGG | - | chr7_1:62831587-62831606 | Msa1029380:intron | 25.0% |
| !! | TTCAGTTACTTTGATGTAAA+TGG | - | chr7_1:62831630-62831649 | Msa1029380:intron | 25.0% |
| !! | TAAAGAGGTTTTTAATGTTG+TGG | - | chr7_1:62831833-62831852 | Msa1029380:intron | 25.0% |
| !!! | TGTTTTTTATAAACGCTTAC+AGG | - | chr7_1:62831966-62831985 | Msa1029380:intron | 25.0% |
| !! | GTGATAAAAAATTTGAGACA+CGG | - | chr7_1:62832004-62832023 | Msa1029380:intron | 25.0% |
| !! | TGATAAAAAATTTGAGACAC+GGG | - | chr7_1:62832005-62832024 | Msa1029380:intron | 25.0% |
| ! | TGATATGCTACCTTATAAAT+TGG | - | chr7_1:62832500-62832519 | Msa1029380:intron | 25.0% |
| ! | CAACTAGAATCCAATTTATA+AGG | + | chr7_1:62832513-62832532 | None:intergenic | 25.0% |
| AAAAAAACCGAGTGTAGTTA+TGG | + | chr7_1:62828647-62828666 | None:intergenic | 30.0% | |
| AGTAAGCGTAAAAGATGAAA+TGG | + | chr7_1:62828706-62828725 | None:intergenic | 30.0% | |
| CTACTGTAGTAAATCTTACA+AGG | - | chr7_1:62828951-62828970 | Msa1029380:CDS | 30.0% | |
| GAGAAAGAGCTAAAAATTCA+GGG | + | chr7_1:62829015-62829034 | None:intergenic | 30.0% | |
| AGAGAAAGAGCTAAAAATTC+AGG | + | chr7_1:62829016-62829035 | None:intergenic | 30.0% | |
| !!! | TTTTGGGATAACAGTGATTT+TGG | - | chr7_1:62829213-62829232 | Msa1029380:CDS | 30.0% |
| TCTTTGATTGTGCATTTAGT+TGG | - | chr7_1:62829272-62829291 | Msa1029380:CDS | 30.0% | |
| ACAATAAGTAAGCACTTGTA+AGG | + | chr7_1:62829381-62829400 | None:intergenic | 30.0% | |
| ! | AAGTCTATGATTTTGCACTA+TGG | + | chr7_1:62829500-62829519 | None:intergenic | 30.0% |
| GATAACTCATTAAACATTCG+GGG | - | chr7_1:62829551-62829570 | Msa1029380:intron | 30.0% | |
| !!! | CATGACCCATTTTTTTAACA+TGG | + | chr7_1:62829664-62829683 | None:intergenic | 30.0% |
| TTCTTCATGGAAATGTTAAC+TGG | + | chr7_1:62829829-62829848 | None:intergenic | 30.0% | |
| TCAAATGACACCTAAAAACT+AGG | + | chr7_1:62830689-62830708 | None:intergenic | 30.0% | |
| TTGAGGTGAATTTCATTGTT+TGG | + | chr7_1:62830784-62830803 | None:intergenic | 30.0% | |
| TATCCAAGTCTGTATAAAAG+TGG | - | chr7_1:62830920-62830939 | Msa1029380:intron | 30.0% | |
| AAATGTCACTACACTATACA+TGG | - | chr7_1:62831005-62831024 | Msa1029380:intron | 30.0% | |
| !! | GCTTTAATGTTTGAAGCTTT+TGG | + | chr7_1:62831106-62831125 | None:intergenic | 30.0% |
| ! | ATACATGGCTGTAACATTTT+GGG | - | chr7_1:62831235-62831254 | Msa1029380:intron | 30.0% |
| GAAGCAAAACTGCAATAATT+TGG | - | chr7_1:62831332-62831351 | Msa1029380:intron | 30.0% | |
| ! | TATAACTGCAATTAGGTTGT+TGG | - | chr7_1:62831405-62831424 | Msa1029380:intron | 30.0% |
| GGCTATGTAAAAAAATTGCT+CGG | - | chr7_1:62831433-62831452 | Msa1029380:intron | 30.0% | |
| GCTATGTAAAAAAATTGCTC+GGG | - | chr7_1:62831434-62831453 | Msa1029380:intron | 30.0% | |
| CTATGTAAAAAAATTGCTCG+GGG | - | chr7_1:62831435-62831454 | Msa1029380:intron | 30.0% | |
| TATGTAAAAAAATTGCTCGG+GGG | - | chr7_1:62831436-62831455 | Msa1029380:intron | 30.0% | |
| TATAGAATGGAAAAAGTGGA+TGG | + | chr7_1:62831491-62831510 | None:intergenic | 30.0% | |
| TGAATTGCAAAATTGCATGA+AGG | - | chr7_1:62831674-62831693 | Msa1029380:intron | 30.0% | |
| !!! | GTCTCAAATTTTTTATCACC+CGG | + | chr7_1:62832003-62832022 | None:intergenic | 30.0% |
| GCTAAATTGTTAGAAGATAC+AGG | + | chr7_1:62832226-62832245 | None:intergenic | 30.0% | |
| ! | TCACCTTGAAGAATTTTCTT+AGG | - | chr7_1:62832272-62832291 | Msa1029380:intron | 30.0% |
| ACTCCTAAGAAAATTCTTCA+AGG | + | chr7_1:62832278-62832297 | None:intergenic | 30.0% | |
| AGTAACCAAAAATTGCTTCA+CGG | + | chr7_1:62832450-62832469 | None:intergenic | 30.0% | |
| AATGGTACATAAAACAAGAG+TGG | + | chr7_1:62832571-62832590 | None:intergenic | 30.0% | |
| GAAGTTACAAATGCAATAAG+AGG | + | chr7_1:62832673-62832692 | None:intergenic | 30.0% | |
| TATTGCATTTGTAACTTCAG+TGG | - | chr7_1:62832675-62832694 | Msa1029380:intron | 30.0% | |
| !! | TTATTGTTGGTGTTTTTCCA+TGG | + | chr7_1:62832762-62832781 | None:intergenic | 30.0% |
| TCATCTTGAGTACTTATTGT+TGG | + | chr7_1:62832775-62832794 | None:intergenic | 30.0% | |
| AACAATAAGTACTCAAGATG+AGG | - | chr7_1:62832774-62832793 | Msa1029380:exon | 30.0% | |
| ATCAAGACCATAACTACACT+CGG | - | chr7_1:62828637-62828656 | Msa1029380:three_prime_UTR | 35.0% | |
| ! | TCATCTTTTACGCTTACTCT+TGG | - | chr7_1:62828708-62828727 | Msa1029380:three_prime_UTR | 35.0% |
| !! | CTTGACTTAACTTGCTTCTA+TGG | - | chr7_1:62828818-62828837 | Msa1029380:CDS | 35.0% |
| ! | CATTTCCTTTGGAAACTAGT+GGG | + | chr7_1:62828858-62828877 | None:intergenic | 35.0% |
| ! | CACTAGTTTCCAAAGGAAAT+GGG | - | chr7_1:62828857-62828876 | Msa1029380:CDS | 35.0% |
| ATCCAAGTCTGTATAAAACC+TGG | - | chr7_1:62829069-62829088 | Msa1029380:CDS | 35.0% | |
| TAGAAGAATGTGGACAAAGA+AGG | + | chr7_1:62829113-62829132 | None:intergenic | 35.0% | |
| AGTAGGGGTAATAATCACTT+TGG | + | chr7_1:62829578-62829597 | None:intergenic | 35.0% | |
| CATGTAATAATTGGTCCATG+TGG | + | chr7_1:62829875-62829894 | None:intergenic | 35.0% | |
| ACCAATTATTACATGCATCG+TGG | - | chr7_1:62829880-62829899 | Msa1029380:CDS | 35.0% | |
| !! | TCAAAAAGCGTTAGAAAGTG+TGG | + | chr7_1:62829965-62829984 | None:intergenic | 35.0% |
| !! | TCGTCTTATTTCTCTAAACG+TGG | - | chr7_1:62830153-62830172 | Msa1029380:intron | 35.0% |
| ATTCATGGTTCTCTCATATG+AGG | - | chr7_1:62830395-62830414 | Msa1029380:intron | 35.0% | |
| GAGGGAATTGAAATACTTTG+AGG | + | chr7_1:62830801-62830820 | None:intergenic | 35.0% | |
| ! | TTTAGAGTGTGTTTGGATGA+GGG | + | chr7_1:62830850-62830869 | None:intergenic | 35.0% |
| ! | ATTTAGAGTGTGTTTGGATG+AGG | + | chr7_1:62830851-62830870 | None:intergenic | 35.0% |
| !! | TGACCACTTTTATACAGACT+TGG | + | chr7_1:62830926-62830945 | None:intergenic | 35.0% |
| TCACTACACTATACATGGAA+TGG | - | chr7_1:62831010-62831029 | Msa1029380:intron | 35.0% | |
| ! | AGCCCTTTCACTTAATCTTT+TGG | - | chr7_1:62831123-62831142 | Msa1029380:intron | 35.0% |
| ! | CATACATGGCTGTAACATTT+TGG | - | chr7_1:62831234-62831253 | Msa1029380:intron | 35.0% |
| GAATGATGAGTTTGACTGAT+CGG | - | chr7_1:62831278-62831297 | Msa1029380:intron | 35.0% | |
| AATGATGAGTTTGACTGATC+GGG | - | chr7_1:62831279-62831298 | Msa1029380:intron | 35.0% | |
| ATGTAAAAAAATTGCTCGGG+GGG | - | chr7_1:62831437-62831456 | Msa1029380:intron | 35.0% | |
| !! | TGTTGGGGTTTGATGATTTT+CGG | - | chr7_1:62831763-62831782 | Msa1029380:intron | 35.0% |
| ! | TGATGATTTTCGGAGATTTG+TGG | - | chr7_1:62831773-62831792 | Msa1029380:intron | 35.0% |
| !! | TAAAGGGCAAAGCTTTAAAG+AGG | - | chr7_1:62831818-62831837 | Msa1029380:intron | 35.0% |
| ! | TTTTAATGTTGTGGATCCTG+AGG | - | chr7_1:62831842-62831861 | Msa1029380:intron | 35.0% |
| TTGATCAGTTCTATCTCAAG+AGG | - | chr7_1:62831874-62831893 | Msa1029380:intron | 35.0% | |
| !!! | TCAAATTTTTTATCACCCGG+TGG | + | chr7_1:62832000-62832019 | None:intergenic | 35.0% |
| CAACATATCAAGCTAGCAAT+TGG | + | chr7_1:62832100-62832119 | None:intergenic | 35.0% | |
| ! | TTTATTTCTTGCTCCTCTTC+AGG | - | chr7_1:62832174-62832193 | Msa1029380:intron | 35.0% |
| ! | TGAAAGCTTTTTGTTCGAGT+GGG | + | chr7_1:62832255-62832274 | None:intergenic | 35.0% |
| GGGTTTCTACTGACATTATT+TGG | - | chr7_1:62832325-62832344 | Msa1029380:intron | 35.0% | |
| !! | GTTTGTGGTTATTTCAGGTT+GGG | + | chr7_1:62832401-62832420 | None:intergenic | 35.0% |
| ! | TGTTTGTGGTTATTTCAGGT+TGG | + | chr7_1:62832402-62832421 | None:intergenic | 35.0% |
| ! | GTACTGTTTGTGGTTATTTC+AGG | + | chr7_1:62832406-62832425 | None:intergenic | 35.0% |
| AAGGTAGCATATCATGAATG+CGG | + | chr7_1:62832494-62832513 | None:intergenic | 35.0% | |
| ! | TTTGTAACTTCAGTGGCTTT+TGG | - | chr7_1:62832682-62832701 | Msa1029380:intron | 35.0% |
| !!! | CATTACCCTTGTTTTTGTCT+TGG | - | chr7_1:62832705-62832724 | Msa1029380:intron | 35.0% |
| TGTCACCAAGACAAAAACAA+GGG | + | chr7_1:62832713-62832732 | None:intergenic | 35.0% | |
| ATGTCACCAAGACAAAAACA+AGG | + | chr7_1:62832714-62832733 | None:intergenic | 35.0% | |
| TAAGCACGGTGTAATTATAC+AGG | - | chr7_1:62832838-62832857 | Msa1029380:intron | 35.0% | |
| ATTATACAGGATGCTTCATG+AGG | - | chr7_1:62832851-62832870 | Msa1029380:intron | 35.0% | |
| TAAGCACGGTGTAATTATAC+AGG | - | chr7_1:62832838-62832857 | Msa1029380:intron | 35.0% | |
| !! | GGATGATTGGTGTCAAGAAA+TGG | + | chr7_1:62828685-62828704 | None:intergenic | 40.0% |
| AGTTACCATGGTGAGTGAAA+AGG | + | chr7_1:62828734-62828753 | None:intergenic | 40.0% | |
| AGAAGCAAAGCAAGTTACCA+TGG | + | chr7_1:62828746-62828765 | None:intergenic | 40.0% | |
| ! | CTTAACCCACTAGTTTCCAA+AGG | - | chr7_1:62828850-62828869 | Msa1029380:CDS | 40.0% |
| ! | CCATTTCCTTTGGAAACTAG+TGG | + | chr7_1:62828859-62828878 | None:intergenic | 40.0% |
| ! | CCACTAGTTTCCAAAGGAAA+TGG | - | chr7_1:62828856-62828875 | Msa1029380:CDS | 40.0% |
| !! | GACCAGGTTTTATACAGACT+TGG | + | chr7_1:62829074-62829093 | None:intergenic | 40.0% |
| GTCTGTATAAAACCTGGTCA+TGG | - | chr7_1:62829075-62829094 | Msa1029380:CDS | 40.0% | |
| ATGGAATAGAATCCATGACC+AGG | + | chr7_1:62829090-62829109 | None:intergenic | 40.0% | |
| AGAATGTGGACAAAGAAGGA+TGG | + | chr7_1:62829109-62829128 | None:intergenic | 40.0% | |
| ! | TCTTGTTTGATATTGGTCCC+TGG | - | chr7_1:62829600-62829619 | Msa1029380:CDS | 40.0% |
| ! | AGTTTTCTTAACTAGTGCCC+CGG | + | chr7_1:62829700-62829719 | None:intergenic | 40.0% |
| AAAACTAATGGTGTGCCACA+TGG | - | chr7_1:62829857-62829876 | Msa1029380:CDS | 40.0% | |
| GCCACGATGCATGTAATAAT+TGG | + | chr7_1:62829884-62829903 | None:intergenic | 40.0% | |
| ATCTGTGATCATAGCTCAGT+TGG | + | chr7_1:62830187-62830206 | None:intergenic | 40.0% | |
| TTAACGTAAGATGGAAGGAG+AGG | - | chr7_1:62830369-62830388 | Msa1029380:intron | 40.0% | |
| TGGAAGGAGAGGATAATTCA+TGG | - | chr7_1:62830380-62830399 | Msa1029380:intron | 40.0% | |
| TAGAAGAATGGGGTCAAACA+AGG | + | chr7_1:62830968-62830987 | None:intergenic | 40.0% | |
| TTCAAGCTTCAAGCTCAAAG+AGG | - | chr7_1:62831046-62831065 | Msa1029380:intron | 40.0% | |
| GTTATCTGTGGAGGATTTAG+AGG | - | chr7_1:62831710-62831729 | Msa1029380:intron | 40.0% | |
| GAGGGAACAAGGAAGATAAA+GGG | - | chr7_1:62831802-62831821 | Msa1029380:intron | 40.0% | |
| TGATCAAATAGACTCACCTC+AGG | + | chr7_1:62831861-62831880 | None:intergenic | 40.0% | |
| !!! | TTTTTTATCACCCGGTGGAA+CGG | + | chr7_1:62831995-62832014 | None:intergenic | 40.0% |
| GGTACATACATAGAAGAGCA+AGG | + | chr7_1:62832079-62832098 | None:intergenic | 40.0% | |
| AGATACAGGAAGAACATCGT+TGG | + | chr7_1:62832212-62832231 | None:intergenic | 40.0% | |
| ! | GAAAGCTTTTTGTTCGAGTG+GGG | + | chr7_1:62832254-62832273 | None:intergenic | 40.0% |
| ! | GTGAAAGCTTTTTGTTCGAG+TGG | + | chr7_1:62832256-62832275 | None:intergenic | 40.0% |
| ! | AGCTTCCGTGAAGCAATTTT+TGG | - | chr7_1:62832442-62832461 | Msa1029380:intron | 40.0% |
| CATTGCTCGTTCTTTATGTC+AGG | - | chr7_1:62832731-62832750 | Msa1029380:intron | 40.0% | |
| CTTTATGTCAGGTTACTCCA+TGG | - | chr7_1:62832742-62832761 | Msa1029380:CDS | 40.0% | |
| CAGATGTCTTCGTTTAAGCA+CGG | - | chr7_1:62832824-62832843 | Msa1029380:intron | 40.0% | |
| TGTTCAAATCATCCTCATCC+AGG | + | chr7_1:62832881-62832900 | None:intergenic | 40.0% | |
| CAGATGTCTTCGTTTAAGCA+CGG | - | chr7_1:62832824-62832843 | Msa1029380:intron | 40.0% | |
| AAGAAATGGTGCTCTGCACT+AGG | + | chr7_1:62828671-62828690 | None:intergenic | 45.0% | |
| ! | TTTCCAAAGGAAATGGGCTC+CGG | - | chr7_1:62828863-62828882 | Msa1029380:CDS | 45.0% |
| ! | TAATCGGGAGGTTGATCAAG+AGG | - | chr7_1:62828889-62828908 | Msa1029380:CDS | 45.0% |
| GTCATGTTAACCACTGTCTC+CGG | - | chr7_1:62829678-62829697 | Msa1029380:intron | 45.0% | |
| TCATGTTAACCACTGTCTCC+GGG | - | chr7_1:62829679-62829698 | Msa1029380:intron | 45.0% | |
| ATTCCTTAACATGTGCCACG+AGG | - | chr7_1:62829800-62829819 | Msa1029380:CDS | 45.0% | |
| TTCCTTAACATGTGCCACGA+GGG | - | chr7_1:62829801-62829820 | Msa1029380:CDS | 45.0% | |
| TGATATCGGTCCTTGCACTT+TGG | - | chr7_1:62829982-62830001 | Msa1029380:CDS | 45.0% | |
| GAGACCAATTCCAAAGTGCA+AGG | + | chr7_1:62829995-62830014 | None:intergenic | 45.0% | |
| TGATCATAGCTCAGTTGGCA+AGG | + | chr7_1:62830182-62830201 | None:intergenic | 45.0% | |
| TCCTTGAACCAGTTGTTCCA+CGG | - | chr7_1:62829040-62829059 | Msa1029380:CDS | 45.0% | |
| AGAATGGGGTCAAACAAGGA+TGG | + | chr7_1:62830964-62830983 | None:intergenic | 45.0% | |
| CACAGATAACTCCTCATGGA+TGG | + | chr7_1:62831700-62831719 | None:intergenic | 45.0% | |
| CATCCATGAGGAGTTATCTG+TGG | - | chr7_1:62831698-62831717 | Msa1029380:intron | 45.0% | |
| ATCTGTGGAGGATTTAGAGG+CGG | - | chr7_1:62831713-62831732 | Msa1029380:intron | 45.0% | |
| TCTAGACGGTGATGAACTGT+TGG | - | chr7_1:62831746-62831765 | Msa1029380:intron | 45.0% | |
| CTAGACGGTGATGAACTGTT+GGG | - | chr7_1:62831747-62831766 | Msa1029380:intron | 45.0% | |
| TAGACGGTGATGAACTGTTG+GGG | - | chr7_1:62831748-62831767 | Msa1029380:intron | 45.0% | |
| CGAGGGAACAAGGAAGATAA+AGG | - | chr7_1:62831801-62831820 | Msa1029380:intron | 45.0% | |
| GTTTCTCCATTTGCCTGAAG+AGG | + | chr7_1:62832190-62832209 | None:intergenic | 45.0% | |
| TTGGGACTGATCAAATGGAG+TGG | + | chr7_1:62832383-62832402 | None:intergenic | 45.0% | |
| !! | TCAGGTTGGGACTGATCAAA+TGG | + | chr7_1:62832388-62832407 | None:intergenic | 45.0% |
| TGAGTGTGGTGTACTGTTTG+TGG | + | chr7_1:62832416-62832435 | None:intergenic | 45.0% | |
| TGTACCATTCCTCTACTTCC+CGG | - | chr7_1:62832582-62832601 | Msa1029380:intron | 45.0% | |
| ATCAGCTTTACGCGTTCATG+TGG | - | chr7_1:62832621-62832640 | Msa1029380:intron | 45.0% | |
| CAAATGCAATAAGAGGCAGC+TGG | + | chr7_1:62832666-62832685 | None:intergenic | 45.0% | |
| TACTCAAGATGAGGTTGTCC+TGG | - | chr7_1:62832783-62832802 | Msa1029380:intron | 45.0% | |
| CGTTCAAATCATCCTCATCC+AGG | + | chr7_1:62832804-62832823 | None:intergenic | 45.0% | |
| GATGCTTCATGAGGTTATCC+TGG | - | chr7_1:62832860-62832879 | Msa1029380:intron | 45.0% | |
| TCATGAGGTTATCCTGGATG+AGG | - | chr7_1:62832866-62832885 | Msa1029380:intron | 45.0% | |
| !! | TATTTAAATTTAATTATCAT+TGG | - | chr7_1:62830290-62830309 | Msa1029380:intron | 5.0% |
| !! | ATTTAAATTTAATTATCATT+GGG | - | chr7_1:62830291-62830310 | Msa1029380:intron | 5.0% |
| !!! | GTAATTTTTTAAAATTTTAT+TGG | - | chr7_1:62830583-62830602 | Msa1029380:intron | 5.0% |
| !! | CTTGGCCTTTTCACTCACCA+TGG | - | chr7_1:62828726-62828745 | Msa1029380:three_prime_UTR | 50.0% |
| ! | AAATGGGCTCCGGTGGTAAT+CGG | - | chr7_1:62828873-62828892 | Msa1029380:CDS | 50.0% |
| ATCAACCTCCCGATTACCAC+CGG | + | chr7_1:62828885-62828904 | None:intergenic | 50.0% | |
| ! | GACGTGGAACAACTGGTTCA+AGG | + | chr7_1:62829044-62829063 | None:intergenic | 50.0% |
| TGAACCAGTTGTTCCACGTC+AGG | - | chr7_1:62829044-62829063 | Msa1029380:CDS | 50.0% | |
| GAACCAGTTGTTCCACGTCA+GGG | - | chr7_1:62829045-62829064 | Msa1029380:CDS | 50.0% | |
| ATACCCTGACGTGGAACAAC+TGG | + | chr7_1:62829051-62829070 | None:intergenic | 50.0% | |
| CATGTTAACCACTGTCTCCG+GGG | - | chr7_1:62829680-62829699 | Msa1029380:intron | 50.0% | |
| AATGTTAACTGGTGCCCTCG+TGG | + | chr7_1:62829818-62829837 | None:intergenic | 50.0% | |
| !! | CGGTCCTTGCACTTTGGAAT+TGG | - | chr7_1:62829988-62830007 | Msa1029380:CDS | 50.0% |
| ATACCATGCCGTGGAACAAC+TGG | + | chr7_1:62830903-62830922 | None:intergenic | 50.0% | |
| ! | GCAATTAGGTTGTTGGCCGT+TGG | - | chr7_1:62831412-62831431 | Msa1029380:intron | 50.0% |
| ! | AATTGCTCGGGGGGTTGATT+TGG | - | chr7_1:62831446-62831465 | Msa1029380:intron | 50.0% |
| TTGCATGAAGGCCATCCATG+AGG | - | chr7_1:62831686-62831705 | Msa1029380:intron | 50.0% | |
| CCTCCACAGATAACTCCTCA+TGG | + | chr7_1:62831704-62831723 | None:intergenic | 50.0% | |
| CCATGAGGAGTTATCTGTGG+AGG | - | chr7_1:62831701-62831720 | Msa1029380:intron | 50.0% | |
| ! | GCGGTTGAGGCATTTCTAGA+CGG | - | chr7_1:62831732-62831751 | Msa1029380:intron | 50.0% |
| GGAGATTTGTGGAAGCTCGA+GGG | - | chr7_1:62831784-62831803 | Msa1029380:intron | 50.0% | |
| CTTACAGGTTTCCGTTCCAC+CGG | - | chr7_1:62831981-62832000 | Msa1029380:intron | 50.0% | |
| TTACAGGTTTCCGTTCCACC+GGG | - | chr7_1:62831982-62832001 | Msa1029380:intron | 50.0% | |
| AGTCTCTGTAGCATGCTTGC+TGG | - | chr7_1:62832045-62832064 | Msa1029380:intron | 50.0% | |
| GTCTCTGTAGCATGCTTGCT+GGG | - | chr7_1:62832046-62832065 | Msa1029380:intron | 50.0% | |
| CTTGCTCCTCTTCAGGCAAA+TGG | - | chr7_1:62832181-62832200 | Msa1029380:intron | 50.0% | |
| AGTAGAAACCCATGTTCGCG+TGG | + | chr7_1:62832316-62832335 | None:intergenic | 50.0% | |
| CGGAAGCTTACTAGTGAGTG+TGG | + | chr7_1:62832430-62832449 | None:intergenic | 50.0% | |
| ! | GCGGTGATTTGCGCAATTTC+TGG | + | chr7_1:62832475-62832494 | None:intergenic | 50.0% |
| TGCCACTAGCACTTAGACTG+CGG | - | chr7_1:62832533-62832552 | Msa1029380:intron | 50.0% | |
| AAGCTGATGCCTTGCGTAAC+AGG | + | chr7_1:62832609-62832628 | None:intergenic | 50.0% | |
| TTACGCGTTCATGTGGCTTG+CGG | - | chr7_1:62832628-62832647 | Msa1029380:intron | 50.0% | |
| AGATGAGGTTGTCCTGGATG+AGG | - | chr7_1:62832789-62832808 | Msa1029380:intron | 50.0% | |
| ! | AATGGGCTCCGGTGGTAATC+GGG | - | chr7_1:62828874-62828893 | Msa1029380:CDS | 55.0% |
| CAGACTTGGATACCCTGACG+TGG | + | chr7_1:62829060-62829079 | None:intergenic | 55.0% | |
| TGCCCTCGTGGCACATGTTA+AGG | + | chr7_1:62829806-62829825 | None:intergenic | 55.0% | |
| ! | GCCGTGGAACAACTGGTTCA+AGG | + | chr7_1:62830896-62830915 | None:intergenic | 55.0% |
| GAACCAGTTGTTCCACGGCA+TGG | - | chr7_1:62830897-62830916 | Msa1029380:intron | 55.0% | |
| CAGACTTGGATACCATGCCG+TGG | + | chr7_1:62830912-62830931 | None:intergenic | 55.0% | |
| GGAGGATTTAGAGGCGGTTG+AGG | - | chr7_1:62831719-62831738 | Msa1029380:intron | 55.0% | |
| CGGAGATTTGTGGAAGCTCG+AGG | - | chr7_1:62831783-62831802 | Msa1029380:intron | 55.0% | |
| TGTGGAAGCTCGAGGGAACA+AGG | - | chr7_1:62831791-62831810 | Msa1029380:intron | 55.0% | |
| TCCATTTCGCCACGCGAACA+TGG | - | chr7_1:62832304-62832323 | Msa1029380:intron | 55.0% | |
| CCATTTCGCCACGCGAACAT+GGG | - | chr7_1:62832305-62832324 | Msa1029380:intron | 55.0% | |
| AGCCGCAGTCTAAGTGCTAG+TGG | + | chr7_1:62832538-62832557 | None:intergenic | 55.0% | |
| AGGTCCGGGAAGTAGAGGAA+TGG | + | chr7_1:62832589-62832608 | None:intergenic | 55.0% | |
| GTAACAGGTCCGGGAAGTAG+AGG | + | chr7_1:62832594-62832613 | None:intergenic | 55.0% | |
| ATGCCTTGCGTAACAGGTCC+GGG | + | chr7_1:62832603-62832622 | None:intergenic | 55.0% | |
| GATGCCTTGCGTAACAGGTC+CGG | + | chr7_1:62832604-62832623 | None:intergenic | 55.0% | |
| CCACCGGAGCCCATTTCCTT+TGG | + | chr7_1:62828869-62828888 | None:intergenic | 60.0% | |
| ! | CCAAAGGAAATGGGCTCCGG+TGG | - | chr7_1:62828866-62828885 | Msa1029380:CDS | 60.0% |
| AACTAGTGCCCCGGAGACAG+TGG | + | chr7_1:62829691-62829710 | None:intergenic | 60.0% | |
| CCCATGTTCGCGTGGCGAAA+TGG | + | chr7_1:62832308-62832327 | None:intergenic | 60.0% | |
| CTTCCCGGACCTGTTACGCA+AGG | - | chr7_1:62832597-62832616 | Msa1029380:intron | 60.0% | |
| ! | CGCGTTCATGTGGCTTGCGG+CGG | - | chr7_1:62832631-62832650 | Msa1029380:intron | 65.0% |
| GGGCTCCGGTGGTAATCGGG+AGG | - | chr7_1:62828877-62828896 | Msa1029380:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 62828634 | 62833015 | 62828634 | ID=Msa1029380;Name=Msa1029380 |
| chr7_1 | mRNA | 62828634 | 62833015 | 62828634 | ID=Msa1029380-mRNA-1;Parent=Msa1029380;Name=Msa1029380-mRNA-1;_AED=0.12;_eAED=0.12;_QI=129|1|1|1|0.4|0.5|6|175|361 |
| chr7_1 | exon | 62828634 | 62829453 | 62828634 | ID=Msa1029380-mRNA-1:exon:13545;Parent=Msa1029380-mRNA-1 |
| chr7_1 | exon | 62829560 | 62829661 | 62829560 | ID=Msa1029380-mRNA-1:exon:13544;Parent=Msa1029380-mRNA-1 |
| chr7_1 | exon | 62829786 | 62830040 | 62829786 | ID=Msa1029380-mRNA-1:exon:13543;Parent=Msa1029380-mRNA-1 |
| chr7_1 | exon | 62830182 | 62830229 | 62830182 | ID=Msa1029380-mRNA-1:exon:13542;Parent=Msa1029380-mRNA-1 |
| chr7_1 | exon | 62832739 | 62832794 | 62832739 | ID=Msa1029380-mRNA-1:exon:13541;Parent=Msa1029380-mRNA-1 |
| chr7_1 | exon | 62832907 | 62833015 | 62832907 | ID=Msa1029380-mRNA-1:exon:13540;Parent=Msa1029380-mRNA-1 |
| chr7_1 | five_prime_UTR | 62832907 | 62833015 | 62832907 | ID=Msa1029380-mRNA-1:five_prime_utr;Parent=Msa1029380-mRNA-1 |
| chr7_1 | five_prime_UTR | 62832775 | 62832794 | 62832775 | ID=Msa1029380-mRNA-1:five_prime_utr;Parent=Msa1029380-mRNA-1 |
| chr7_1 | CDS | 62832739 | 62832774 | 62832739 | ID=Msa1029380-mRNA-1:cds;Parent=Msa1029380-mRNA-1 |
| chr7_1 | CDS | 62830182 | 62830229 | 62830182 | ID=Msa1029380-mRNA-1:cds;Parent=Msa1029380-mRNA-1 |
| chr7_1 | CDS | 62829786 | 62830040 | 62829786 | ID=Msa1029380-mRNA-1:cds;Parent=Msa1029380-mRNA-1 |
| chr7_1 | CDS | 62829560 | 62829661 | 62829560 | ID=Msa1029380-mRNA-1:cds;Parent=Msa1029380-mRNA-1 |
| chr7_1 | CDS | 62828809 | 62829453 | 62828809 | ID=Msa1029380-mRNA-1:cds;Parent=Msa1029380-mRNA-1 |
| chr7_1 | three_prime_UTR | 62828634 | 62828808 | 62828634 | ID=Msa1029380-mRNA-1:three_prime_utr;Parent=Msa1029380-mRNA-1 |
| Gene Sequence |
| Protein sequence |
