Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1068240 | ABN05929.1 | 41.784 | 213 | 114 | 8 | 89 | 297 | 1 | 207 | 9.55e-32 | 128 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1068240 | A2Q1W2 | 41.784 | 213 | 114 | 8 | 89 | 297 | 1 | 207 | 4.56e-32 | 128 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1029380 | Msa1068240 | 0.955880 | 1.089025e-113 | -8.615850e-47 |
| Msa1029390 | Msa1068240 | 0.800095 | 1.692493e-48 | -8.615850e-47 |
| Msa1068240 | Msa1156380 | 0.932467 | 8.158298e-95 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1068240 | MtrunA17_Chr7g0250191 | 41.784 | 213 | 114 | 8 | 89 | 297 | 1 | 207 | 8.78e-36 | 128 |
| Msa1068240 | MtrunA17_Chr7g0250171 | 40.104 | 192 | 105 | 5 | 91 | 277 | 92 | 278 | 8.29e-31 | 117 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 97 sgRNAs with CRISPR-Local
Find 272 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATATGCTACCTTATAAAT+TGG | 0.194854 | 7_2:-63229654 | Msa1068240:CDS |
| GGGTTTCTACTGACATTATT+TGG | 0.199993 | 7_2:-63229829 | Msa1068240:CDS |
| GTACTGTTTGTGGTTATTTC+AGG | 0.218791 | 7_2:+63229751 | None:intergenic |
| TTCAGTTACTTTGATGTAAA+TGG | 0.224758 | 7_2:-63230524 | Msa1068240:five_prime_UTR |
| GCGGTGATTTGCGCAATTTC+TGG | 0.233947 | 7_2:+63229682 | None:intergenic |
| AAGCTGATGCCTTGCGTAAC+AGG | 0.279171 | 7_2:+63229548 | None:intergenic |
| TTTGTAACTTCAGTGGCTTT+TGG | 0.337238 | 7_2:-63229472 | Msa1068240:CDS |
| AAAGGGGCTCCGGTGGTAAT+CGG | 0.343364 | 7_2:-63233279 | Msa1068240:five_prime_UTR |
| CAACTAGAATCCAATTTATA+AGG | 0.347305 | 7_2:+63229644 | None:intergenic |
| AGTCTCTGTAGCATGCTTGC+TGG | 0.352137 | 7_2:-63230109 | Msa1068240:CDS |
| CCACCGGAGCCCCTTTCCTT+TGG | 0.353520 | 7_2:+63233286 | None:intergenic |
| CCCATGTTCGCGTGGCGAAA+TGG | 0.354518 | 7_2:+63229849 | None:intergenic |
| CTTGCTCCTCTTCAGGCAAA+TGG | 0.379382 | 7_2:-63229973 | Msa1068240:intron |
| CGAGGGAACAAGGAAGATAA+AGG | 0.383866 | 7_2:-63230353 | Msa1068240:CDS |
| TGTACCATTCCTCTACTTCC+CGG | 0.384557 | 7_2:-63229572 | Msa1068240:CDS |
| GTTTGTGGTTATTTCAGGTT+GGG | 0.384684 | 7_2:+63229756 | None:intergenic |
| AAGGGGCTCCGGTGGTAATC+GGG | 0.396303 | 7_2:-63233278 | Msa1068240:five_prime_UTR |
| CATTGCTCGTTCTTTATGTC+AGG | 0.401081 | 7_2:-63229423 | Msa1068240:CDS |
| AGTAAGCGTAAAAGATGAAA+TGG | 0.405844 | 7_2:+63233449 | None:intergenic |
| TCCATTTCGCCACGCGAACA+TGG | 0.411223 | 7_2:-63229850 | Msa1068240:CDS |
| GTTATCTGTGGAGGATTTAG+AGG | 0.411714 | 7_2:-63230444 | Msa1068240:CDS |
| GTCTCTGTAGCATGCTTGCT+GGG | 0.411876 | 7_2:-63230108 | Msa1068240:CDS |
| TCATCTTGAGTACTTATTGT+TGG | 0.412372 | 7_2:+63229382 | None:intergenic |
| GCTAAATTGTTAGAAGATAC+AGG | 0.420133 | 7_2:+63229931 | None:intergenic |
| TACTCAAGATGAGGTTGTCC+TGG | 0.433902 | 7_2:-63229371 | Msa1068240:CDS |
| CCCTTTCCTTTGGAAACTAG+TGG | 0.445596 | 7_2:+63233296 | None:intergenic |
| ACTCCTAAGAAAATTCTTCA+AGG | 0.447232 | 7_2:+63229879 | None:intergenic |
| TAAGCACGGTGTAATTATAC+AGG | 0.447737 | 7_2:-63229239 | Msa1068240:three_prime_UTR |
| TAAGCACGGTGTAATTATAC+AGG | 0.447737 | 7_2:-63229316 | Msa1068240:three_prime_UTR |
| TATAACTGCAATTAGGTTGT+TGG | 0.450790 | 7_2:-63230749 | Msa1068240:intron |
| CCACTAGTTTCCAAAGGAAA+GGG | 0.452135 | 7_2:-63233296 | Msa1068240:five_prime_UTR |
| CTAGACGGTGATGAACTGTT+GGG | 0.455821 | 7_2:-63230407 | Msa1068240:CDS |
| TGTTTGTGGTTATTTCAGGT+TGG | 0.464613 | 7_2:+63229755 | None:intergenic |
| TTTCCAAAGGAAAGGGGCTC+CGG | 0.464734 | 7_2:-63233289 | Msa1068240:five_prime_UTR |
| GAAGTTACAAATGCAATAAG+AGG | 0.465364 | 7_2:+63229484 | None:intergenic |
| TATTGCATTTGTAACTTCAG+TGG | 0.472514 | 7_2:-63229479 | Msa1068240:CDS |
| TCAGGTTGGGACTGATCAAA+TGG | 0.477463 | 7_2:+63229769 | None:intergenic |
| CCATTTCGCCACGCGAACAT+GGG | 0.483035 | 7_2:-63229849 | Msa1068240:CDS |
| ATGCCTTGCGTAACAGGTCC+GGG | 0.487951 | 7_2:+63229554 | None:intergenic |
| GATGCTTCATGAGGTTATCC+TGG | 0.494541 | 7_2:-63229294 | Msa1068240:three_prime_UTR |
| TAAAGGGCAAAGCTTTAAAG+AGG | 0.495939 | 7_2:-63230336 | Msa1068240:CDS |
| AGTTACCATGGTGAGTGAAA+AGG | 0.506430 | 7_2:+63233421 | None:intergenic |
| CTTACAGGTTTCCGTTCCAC+CGG | 0.510555 | 7_2:-63230173 | Msa1068240:intron |
| CCCACTAGTTTCCAAAGGAA+AGG | 0.514877 | 7_2:-63233297 | Msa1068240:five_prime_UTR |
| GGATGATTGGTGTCAAGAAA+TGG | 0.517269 | 7_2:+63233470 | None:intergenic |
| CGGAGATTTGTGGAAGCTCG+AGG | 0.524244 | 7_2:-63230371 | Msa1068240:CDS |
| CCTCCACAGATAACTCCTCA+TGG | 0.528422 | 7_2:+63230453 | None:intergenic |
| TCTAGACGGTGATGAACTGT+TGG | 0.531424 | 7_2:-63230408 | Msa1068240:CDS |
| TAAAAGATGAAATGGATGAT+TGG | 0.532647 | 7_2:+63233457 | None:intergenic |
| GGAGGATTTAGAGGCGGTTG+AGG | 0.533575 | 7_2:-63230435 | Msa1068240:CDS |
| AAGAAATGGTGCTCTGCACT+AGG | 0.537224 | 7_2:+63233484 | None:intergenic |
| GCAATTAGGTTGTTGGCCGT+TGG | 0.539578 | 7_2:-63230742 | Msa1068240:intron |
| CCTTTCCTTTGGAAACTAGT+GGG | 0.543402 | 7_2:+63233297 | None:intergenic |
| TGAGTGTGGTGTACTGTTTG+TGG | 0.544187 | 7_2:+63229741 | None:intergenic |
| CGTTCAAATCATCCTCATCC+AGG | 0.544881 | 7_2:+63229353 | None:intergenic |
| CTTTATGTCAGGTTACTCCA+TGG | 0.545073 | 7_2:-63229412 | Msa1068240:CDS |
| TGTTCAAATCATCCTCATCC+AGG | 0.548909 | 7_2:+63229276 | None:intergenic |
| GAGGGAACAAGGAAGATAAA+GGG | 0.552009 | 7_2:-63230352 | Msa1068240:CDS |
| TTACGCGTTCATGTGGCTTG+CGG | 0.554497 | 7_2:-63229526 | Msa1068240:CDS |
| TGTGGAAGCTCGAGGGAACA+AGG | 0.565881 | 7_2:-63230363 | Msa1068240:CDS |
| CTTAACCCACTAGTTTCCAA+AGG | 0.565900 | 7_2:-63233302 | Msa1068240:intron |
| ATCAGCTTTACGCGTTCATG+TGG | 0.567312 | 7_2:-63229533 | Msa1068240:CDS |
| TGCCACTAGCACTTAGACTG+CGG | 0.573207 | 7_2:-63229621 | Msa1068240:CDS |
| ATCAACCTCCCGATTACCAC+CGG | 0.581587 | 7_2:+63233270 | None:intergenic |
| AACAATAAGTACTCAAGATG+AGG | 0.587586 | 7_2:-63229380 | Msa1068240:CDS |
| CACAGATAACTCCTCATGGA+TGG | 0.590113 | 7_2:+63230457 | None:intergenic |
| AGATACAGGAAGAACATCGT+TGG | 0.591251 | 7_2:+63229945 | None:intergenic |
| TAGACGGTGATGAACTGTTG+GGG | 0.595417 | 7_2:-63230406 | Msa1068240:CDS |
| TGAATTGCAAAATTGCATGA+AGG | 0.597499 | 7_2:-63230480 | Msa1068240:exon |
| AGATGAGGTTGTCCTGGATG+AGG | 0.599334 | 7_2:-63229365 | Msa1068240:CDS |
| ATCAAGACCATAACTACACT+CGG | 0.600780 | 7_2:-63233515 | Msa1068240:five_prime_UTR |
| TCATGAGGTTATCCTGGATG+AGG | 0.601123 | 7_2:-63229288 | Msa1068240:three_prime_UTR |
| TTACAGGTTTCCGTTCCACC+GGG | 0.603359 | 7_2:-63230172 | Msa1068240:intron |
| CGGAAGCTTACTAGTGAGTG+TGG | 0.610294 | 7_2:+63229727 | None:intergenic |
| GGAGATTTGTGGAAGCTCGA+GGG | 0.611100 | 7_2:-63230370 | Msa1068240:CDS |
| GCGGTTGAGGCATTTCTAGA+CGG | 0.612643 | 7_2:-63230422 | Msa1068240:CDS |
| CCAAAGGAAAGGGGCTCCGG+TGG | 0.618787 | 7_2:-63233286 | Msa1068240:five_prime_UTR |
| TAATCGGGAGGTTGATCAAG+AGG | 0.623522 | 7_2:-63233263 | Msa1068240:intron |
| ATTATACAGGATGCTTCATG+AGG | 0.626242 | 7_2:-63229303 | Msa1068240:three_prime_UTR |
| ATCTGTGGAGGATTTAGAGG+CGG | 0.627233 | 7_2:-63230441 | Msa1068240:CDS |
| CACTAGTTTCCAAAGGAAAG+GGG | 0.631145 | 7_2:-63233295 | Msa1068240:five_prime_UTR |
| CAAATGCAATAAGAGGCAGC+TGG | 0.632451 | 7_2:+63229491 | None:intergenic |
| CAGATGTCTTCGTTTAAGCA+CGG | 0.633417 | 7_2:-63229253 | Msa1068240:three_prime_UTR |
| GTAACAGGTCCGGGAAGTAG+AGG | 0.634533 | 7_2:+63229563 | None:intergenic |
| AGGTCCGGGAAGTAGAGGAA+TGG | 0.634665 | 7_2:+63229568 | None:intergenic |
| AATGGTACATAAAACAAGAG+TGG | 0.636670 | 7_2:+63229586 | None:intergenic |
| CAGATGTCTTCGTTTAAGCA+CGG | 0.638065 | 7_2:-63229330 | Msa1068240:exon |
| AGTAGAAACCCATGTTCGCG+TGG | 0.639401 | 7_2:+63229841 | None:intergenic |
| AGCCGCAGTCTAAGTGCTAG+TGG | 0.639546 | 7_2:+63229619 | None:intergenic |
| CCATGAGGAGTTATCTGTGG+AGG | 0.646843 | 7_2:-63230453 | Msa1068240:CDS |
| CTTCCCGGACCTGTTACGCA+AGG | 0.650567 | 7_2:-63229557 | Msa1068240:CDS |
| GGTACATACATAGAAGAGCA+AGG | 0.665141 | 7_2:+63230078 | None:intergenic |
| CATCCATGAGGAGTTATCTG+TGG | 0.683615 | 7_2:-63230456 | Msa1068240:CDS |
| GGGCTCCGGTGGTAATCGGG+AGG | 0.686032 | 7_2:-63233275 | Msa1068240:five_prime_UTR |
| TTGGGACTGATCAAATGGAG+TGG | 0.687424 | 7_2:+63229774 | None:intergenic |
| AAGGTAGCATATCATGAATG+CGG | 0.687795 | 7_2:+63229663 | None:intergenic |
| TTGCATGAAGGCCATCCATG+AGG | 0.708194 | 7_2:-63230468 | Msa1068240:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATATTCCTATTATTA+TGG | - | chr7_2:63230559-63230578 | Msa1068240:intron | 10.0% |
| !! | TAATAATAAACCATAATAAT+AGG | + | chr7_2:63230572-63230591 | None:intergenic | 10.0% |
| !! | TTTAAATTTAATTATCATTG+GGG | - | chr7_2:63230819-63230838 | Msa1068240:intron | 10.0% |
| !! | TTAAAATAATATAGAAGAAT+GGG | + | chr7_2:63231506-63231525 | None:intergenic | 10.0% |
| !! | ATTAAAATAATATAGAAGAA+TGG | + | chr7_2:63231507-63231526 | None:intergenic | 10.0% |
| !! | TAAATTAAATTAATGCTTAC+TGG | + | chr7_2:63229514-63229533 | None:intergenic | 15.0% |
| !! | AATTATAATATAGAAGAATG+TGG | + | chr7_2:63229650-63229669 | None:intergenic | 15.0% |
| !! | ATTTGTACCAAAAAAATATA+GGG | + | chr7_2:63229940-63229959 | None:intergenic | 15.0% |
| !! | AATTTGTACCAAAAAAATAT+AGG | + | chr7_2:63229941-63229960 | None:intergenic | 15.0% |
| !! | TTAAATCCATGTTAAAAAAA+TGG | - | chr7_2:63230182-63230201 | Msa1068240:intron | 15.0% |
| !! | TAAATCCATGTTAAAAAAAT+GGG | - | chr7_2:63230183-63230202 | Msa1068240:intron | 15.0% |
| !! | AGAAAAAAAAGTAAAACTAA+TGG | - | chr7_2:63230372-63230391 | Msa1068240:CDS | 15.0% |
| !!! | AAAAAAGTCATTTTTAAAGA+AGG | - | chr7_2:63230635-63230654 | Msa1068240:intron | 15.0% |
| !!! | TCTATATATTTACTTTTCTA+TGG | - | chr7_2:63230858-63230877 | Msa1068240:intron | 15.0% |
| !! | TTCAGAAGTTATTTATTATT+AGG | + | chr7_2:63230976-63230995 | None:intergenic | 15.0% |
| !! | TTCTAAATTTACATGTTTAA+TGG | - | chr7_2:63231034-63231053 | Msa1068240:intron | 15.0% |
| !!! | ATTTTTCAAATTTTGCATTT+TGG | + | chr7_2:63231168-63231187 | None:intergenic | 15.0% |
| !! | TAAAATAATATAGAAGAATG+GGG | + | chr7_2:63231505-63231524 | None:intergenic | 15.0% |
| !!! | ATGTGTTTATTTTATTGATA+TGG | - | chr7_2:63231880-63231899 | Msa1068240:intron | 15.0% |
| !!! | ATTAGTCTCTATAGTTATTT+TGG | - | chr7_2:63229723-63229742 | Msa1068240:CDS | 20.0% |
| !!! | TTAGTCTCTATAGTTATTTT+GGG | - | chr7_2:63229724-63229743 | Msa1068240:CDS | 20.0% |
| !!! | TTTCAATCCCTATATTTTTT+TGG | - | chr7_2:63229930-63229949 | Msa1068240:CDS | 20.0% |
| !!! | TTTGAAATTTCGATATATTG+AGG | - | chr7_2:63230046-63230065 | Msa1068240:intron | 20.0% |
| !! | AATATCAAACAAGAAAAGTA+GGG | + | chr7_2:63230121-63230140 | None:intergenic | 20.0% |
| !! | CTTTGTAAAAAAATTGAACT+TGG | - | chr7_2:63230151-63230170 | Msa1068240:CDS | 20.0% |
| !!! | GTTTTACTTTTTTTTCTTCA+TGG | + | chr7_2:63230369-63230388 | None:intergenic | 20.0% |
| !!! | ACTAATGATATTTTCAACAT+TGG | + | chr7_2:63230468-63230487 | None:intergenic | 20.0% |
| !!! | ATATATTTACTTTTCTATGG+AGG | - | chr7_2:63230861-63230880 | Msa1068240:intron | 20.0% |
| !!! | TTTAATGGATGAAAATTTGA+GGG | - | chr7_2:63231079-63231098 | Msa1068240:intron | 20.0% |
| !!! | TGAAAATTTTGGAAAATTTG+AGG | - | chr7_2:63231141-63231160 | Msa1068240:intron | 20.0% |
| !!! | ATTTGAAATTCCTAGTTTTT+AGG | - | chr7_2:63231203-63231222 | Msa1068240:intron | 20.0% |
| !!! | TTTGTTCAAGTTAAATTTAG+AGG | + | chr7_2:63231242-63231261 | None:intergenic | 20.0% |
| !!! | TTGAAGAATTTTCAAAATGA+TGG | + | chr7_2:63231280-63231299 | None:intergenic | 20.0% |
| !! | AAATTATAGAATGGAAAAAG+TGG | + | chr7_2:63232020-63232039 | None:intergenic | 20.0% |
| !! | TAATAGCACAAATTATAGAA+TGG | + | chr7_2:63232029-63232048 | None:intergenic | 20.0% |
| !! | TATGAACTAATCATGATATA+TGG | - | chr7_2:63232097-63232116 | Msa1068240:intron | 20.0% |
| !! | ATCATGATATATGGTTATTA+TGG | - | chr7_2:63232106-63232125 | Msa1068240:intron | 20.0% |
| !!! | TAAAGAGGTTTTTAATGTTT+TGG | - | chr7_2:63232358-63232377 | Msa1068240:intron | 20.0% |
| ! | TAAAAGATGAAATGGATGAT+TGG | + | chr7_2:63229225-63229244 | None:intergenic | 25.0% |
| ! | TTCGATACTATACACATTTA+CGG | + | chr7_2:63229767-63229786 | None:intergenic | 25.0% |
| ! | GTGATAACTCATTAAACATT+CGG | - | chr7_2:63230076-63230095 | Msa1068240:intron | 25.0% |
| ! | TGATAACTCATTAAACATTC+GGG | - | chr7_2:63230077-63230096 | Msa1068240:intron | 25.0% |
| ! | ATATCAAACAAGAAAAGTAG+GGG | + | chr7_2:63230120-63230139 | None:intergenic | 25.0% |
| ! | CAATATCAAACAAGAAAAGT+AGG | + | chr7_2:63230122-63230141 | None:intergenic | 25.0% |
| !!! | CTACTTTTCTTGTTTGATAT+TGG | - | chr7_2:63230120-63230139 | Msa1068240:CDS | 25.0% |
| !!! | CAATTTTTTTACAAAGTCCA+GGG | + | chr7_2:63230147-63230166 | None:intergenic | 25.0% |
| !!! | TCAATTTTTTTACAAAGTCC+AGG | + | chr7_2:63230148-63230167 | None:intergenic | 25.0% |
| !!! | TTTCTAACGCTTTTTGATAT+CGG | - | chr7_2:63230494-63230513 | Msa1068240:five_prime_UTR | 25.0% |
| !!! | GTGTATATTTTAACGTAAGA+TGG | - | chr7_2:63230887-63230906 | Msa1068240:intron | 25.0% |
| !!! | ATATTTTAACGTAAGATGGA+AGG | - | chr7_2:63230891-63230910 | Msa1068240:intron | 25.0% |
| ! | TTAAACATATGTCATAAGAG+TGG | + | chr7_2:63231064-63231083 | None:intergenic | 25.0% |
| ! | CTCTTATGACATATGTTTAA+TGG | - | chr7_2:63231064-63231083 | Msa1068240:intron | 25.0% |
| !! | GTTTAATGGATGAAAATTTG+AGG | - | chr7_2:63231078-63231097 | Msa1068240:intron | 25.0% |
| !! | TGGAGTCAATTTGAAAATTT+TGG | - | chr7_2:63231130-63231149 | Msa1068240:intron | 25.0% |
| !!! | GAGATAATGTAATGTTTTGA+GGG | + | chr7_2:63231346-63231365 | None:intergenic | 25.0% |
| !! | TGAGATAATGTAATGTTTTG+AGG | + | chr7_2:63231347-63231366 | None:intergenic | 25.0% |
| !! | AAATTCATTTAGAGTGTGTT+TGG | + | chr7_2:63231384-63231403 | None:intergenic | 25.0% |
| ! | TTCCAAAAGATTAAGTGAAA+GGG | + | chr7_2:63231655-63231674 | None:intergenic | 25.0% |
| ! | ATTCCAAAAGATTAAGTGAA+AGG | + | chr7_2:63231656-63231675 | None:intergenic | 25.0% |
| ! | ACAAAAAAAACTTGCATACA+TGG | - | chr7_2:63231745-63231764 | Msa1068240:intron | 25.0% |
| ! | TTGCTTCAATATCAATTTAG+AGG | + | chr7_2:63231844-63231863 | None:intergenic | 25.0% |
| !! | TTTGAAGTATAACTGCAATT+AGG | - | chr7_2:63231923-63231942 | Msa1068240:intron | 25.0% |
| !!! | CAATTTTTTTACATAGCCAA+CGG | + | chr7_2:63231956-63231975 | None:intergenic | 25.0% |
| ! | ATGAACTAGACTTATAAAGT+TGG | - | chr7_2:63232073-63232092 | Msa1068240:intron | 25.0% |
| ! | ATATATGGTTATTATGGACA+AGG | - | chr7_2:63232112-63232131 | Msa1068240:intron | 25.0% |
| !! | TTCAGTTACTTTGATGTAAA+TGG | - | chr7_2:63232155-63232174 | Msa1068240:intron | 25.0% |
| !!! | TGTTTTTTATAAACGCTTAC+AGG | - | chr7_2:63232491-63232510 | Msa1068240:intron | 25.0% |
| !! | GTGATAAAAAATTTGAGACA+CGG | - | chr7_2:63232529-63232548 | Msa1068240:intron | 25.0% |
| !! | TGATAAAAAATTTGAGACAC+GGG | - | chr7_2:63232530-63232549 | Msa1068240:intron | 25.0% |
| ! | TGATATGCTACCTTATAAAT+TGG | - | chr7_2:63233025-63233044 | Msa1068240:intron | 25.0% |
| ! | CAACTAGAATCCAATTTATA+AGG | + | chr7_2:63233038-63233057 | None:intergenic | 25.0% |
| AAAAAAACCGAGTGTAGTTA+TGG | + | chr7_2:63229174-63229193 | None:intergenic | 30.0% | |
| AGTAAGCGTAAAAGATGAAA+TGG | + | chr7_2:63229233-63229252 | None:intergenic | 30.0% | |
| CTACTGTAGTAAATCTTACA+AGG | - | chr7_2:63229478-63229497 | Msa1068240:CDS | 30.0% | |
| GAGAAAGAGCTAAAAATTGA+GGG | + | chr7_2:63229542-63229561 | None:intergenic | 30.0% | |
| AGAGAAAGAGCTAAAAATTG+AGG | + | chr7_2:63229543-63229562 | None:intergenic | 30.0% | |
| !!! | TTTTGGGATAACAGTGATTT+TGG | - | chr7_2:63229740-63229759 | Msa1068240:CDS | 30.0% |
| TCTTTGATTGTGCATTTAGT+TGG | - | chr7_2:63229799-63229818 | Msa1068240:CDS | 30.0% | |
| ACAATAAGTAAGCACTTGTA+AGG | + | chr7_2:63229908-63229927 | None:intergenic | 30.0% | |
| ! | AAGTCTATGATTTTGCACTA+TGG | + | chr7_2:63230027-63230046 | None:intergenic | 30.0% |
| GATAACTCATTAAACATTCG+GGG | - | chr7_2:63230078-63230097 | Msa1068240:intron | 30.0% | |
| !!! | CATGACCCATTTTTTTAACA+TGG | + | chr7_2:63230191-63230210 | None:intergenic | 30.0% |
| TTCTTCATGGAAATGTTAAC+TGG | + | chr7_2:63230356-63230375 | None:intergenic | 30.0% | |
| TCAAATGACACCTAAAAACT+AGG | + | chr7_2:63231216-63231235 | None:intergenic | 30.0% | |
| TTGAGGTGAATTTCATTGTT+TGG | + | chr7_2:63231311-63231330 | None:intergenic | 30.0% | |
| TATCCAAGTCTGTATAAAAG+TGG | - | chr7_2:63231447-63231466 | Msa1068240:intron | 30.0% | |
| AAATGTCACTACACTATACA+TGG | - | chr7_2:63231532-63231551 | Msa1068240:intron | 30.0% | |
| !! | GCTTTAATGTTTGAAGCTTT+TGG | + | chr7_2:63231633-63231652 | None:intergenic | 30.0% |
| ! | ATACATGGCTGTAACATTTT+GGG | - | chr7_2:63231760-63231779 | Msa1068240:intron | 30.0% |
| GAAGCAAAACTGCAATAATT+TGG | - | chr7_2:63231857-63231876 | Msa1068240:intron | 30.0% | |
| ! | TATAACTGCAATTAGGTTGT+TGG | - | chr7_2:63231930-63231949 | Msa1068240:intron | 30.0% |
| GGCTATGTAAAAAAATTGCT+CGG | - | chr7_2:63231958-63231977 | Msa1068240:intron | 30.0% | |
| GCTATGTAAAAAAATTGCTC+GGG | - | chr7_2:63231959-63231978 | Msa1068240:intron | 30.0% | |
| CTATGTAAAAAAATTGCTCG+GGG | - | chr7_2:63231960-63231979 | Msa1068240:intron | 30.0% | |
| TATGTAAAAAAATTGCTCGG+GGG | - | chr7_2:63231961-63231980 | Msa1068240:intron | 30.0% | |
| TATAGAATGGAAAAAGTGGA+TGG | + | chr7_2:63232016-63232035 | None:intergenic | 30.0% | |
| TGAATTGCAAAATTGCATGA+AGG | - | chr7_2:63232199-63232218 | Msa1068240:intron | 30.0% | |
| !! | TTTTAATGTTTTGGATCCTG+AGG | - | chr7_2:63232367-63232386 | Msa1068240:intron | 30.0% |
| AATTAATATGCCTCTTGAGA+TGG | + | chr7_2:63232412-63232431 | None:intergenic | 30.0% | |
| !!! | GTCTCAAATTTTTTATCACC+CGG | + | chr7_2:63232528-63232547 | None:intergenic | 30.0% |
| GCTAAATTGTTAGAAGATAC+AGG | + | chr7_2:63232751-63232770 | None:intergenic | 30.0% | |
| ! | TCACCTTGAAGAATTTTCTT+AGG | - | chr7_2:63232797-63232816 | Msa1068240:intron | 30.0% |
| ACTCCTAAGAAAATTCTTCA+AGG | + | chr7_2:63232803-63232822 | None:intergenic | 30.0% | |
| AGTAACCAAAAATTGCTTCA+CGG | + | chr7_2:63232975-63232994 | None:intergenic | 30.0% | |
| AATGGTACATAAAACAAGAG+TGG | + | chr7_2:63233096-63233115 | None:intergenic | 30.0% | |
| GAAGTTACAAATGCAATAAG+AGG | + | chr7_2:63233198-63233217 | None:intergenic | 30.0% | |
| TATTGCATTTGTAACTTCAG+TGG | - | chr7_2:63233200-63233219 | Msa1068240:intron | 30.0% | |
| !! | TTATTGTTGGTGTTTTTCCA+TGG | + | chr7_2:63233287-63233306 | None:intergenic | 30.0% |
| TCATCTTGAGTACTTATTGT+TGG | + | chr7_2:63233300-63233319 | None:intergenic | 30.0% | |
| AACAATAAGTACTCAAGATG+AGG | - | chr7_2:63233299-63233318 | Msa1068240:five_prime_UTR | 30.0% | |
| ATCAAGACCATAACTACACT+CGG | - | chr7_2:63229164-63229183 | Msa1068240:three_prime_UTR | 35.0% | |
| ! | TCATCTTTTACGCTTACTCT+TGG | - | chr7_2:63229235-63229254 | Msa1068240:three_prime_UTR | 35.0% |
| !! | CTTGACTTAACTTGCTTCTA+TGG | - | chr7_2:63229345-63229364 | Msa1068240:CDS | 35.0% |
| ATCCAAGTCTGTATAAAACC+TGG | - | chr7_2:63229596-63229615 | Msa1068240:CDS | 35.0% | |
| TAGAAGAATGTGGACAAAGA+AGG | + | chr7_2:63229640-63229659 | None:intergenic | 35.0% | |
| !! | TCAAAAAGCGTTAGAAAGTG+TGG | + | chr7_2:63230491-63230510 | None:intergenic | 35.0% |
| !! | TCGTCTTATTTCTCTAAACG+TGG | - | chr7_2:63230680-63230699 | Msa1068240:intron | 35.0% |
| ATTCATGGTTCTCTCATATG+AGG | - | chr7_2:63230922-63230941 | Msa1068240:intron | 35.0% | |
| GAGGGAATTGAAATACTTTG+AGG | + | chr7_2:63231328-63231347 | None:intergenic | 35.0% | |
| ! | TTTAGAGTGTGTTTGGATGA+GGG | + | chr7_2:63231377-63231396 | None:intergenic | 35.0% |
| ! | ATTTAGAGTGTGTTTGGATG+AGG | + | chr7_2:63231378-63231397 | None:intergenic | 35.0% |
| !! | TGACCACTTTTATACAGACT+TGG | + | chr7_2:63231453-63231472 | None:intergenic | 35.0% |
| TCACTACACTATACATGGAA+TGG | - | chr7_2:63231537-63231556 | Msa1068240:intron | 35.0% | |
| ! | AGCCCTTTCACTTAATCTTT+TGG | - | chr7_2:63231650-63231669 | Msa1068240:intron | 35.0% |
| ! | CATACATGGCTGTAACATTT+TGG | - | chr7_2:63231759-63231778 | Msa1068240:intron | 35.0% |
| GAATGATGAGTTTGACTGAT+CGG | - | chr7_2:63231803-63231822 | Msa1068240:intron | 35.0% | |
| AATGATGAGTTTGACTGATC+GGG | - | chr7_2:63231804-63231823 | Msa1068240:intron | 35.0% | |
| ATGTAAAAAAATTGCTCGGG+GGG | - | chr7_2:63231962-63231981 | Msa1068240:intron | 35.0% | |
| !! | TGTTGGGGTTTGATGATTTT+CGG | - | chr7_2:63232288-63232307 | Msa1068240:intron | 35.0% |
| ! | TGATGATTTTCGGAGATTTG+TGG | - | chr7_2:63232298-63232317 | Msa1068240:intron | 35.0% |
| !! | TAAAGGGCAAAGCTTTAAAG+AGG | - | chr7_2:63232343-63232362 | Msa1068240:intron | 35.0% |
| !!! | TCAAATTTTTTATCACCCGG+TGG | + | chr7_2:63232525-63232544 | None:intergenic | 35.0% |
| CAACATATCAAGCTAGCAAT+TGG | + | chr7_2:63232625-63232644 | None:intergenic | 35.0% | |
| ! | TTTATTTCTTGCTCCTCTTC+AGG | - | chr7_2:63232699-63232718 | Msa1068240:intron | 35.0% |
| ! | TGAAAGCTTTTTGTTCGAGT+GGG | + | chr7_2:63232780-63232799 | None:intergenic | 35.0% |
| GGGTTTCTACTGACATTATT+TGG | - | chr7_2:63232850-63232869 | Msa1068240:intron | 35.0% | |
| !! | GTTTGTGGTTATTTCAGGTT+GGG | + | chr7_2:63232926-63232945 | None:intergenic | 35.0% |
| ! | TGTTTGTGGTTATTTCAGGT+TGG | + | chr7_2:63232927-63232946 | None:intergenic | 35.0% |
| ! | GTACTGTTTGTGGTTATTTC+AGG | + | chr7_2:63232931-63232950 | None:intergenic | 35.0% |
| AAGGTAGCATATCATGAATG+CGG | + | chr7_2:63233019-63233038 | None:intergenic | 35.0% | |
| ! | TTTGTAACTTCAGTGGCTTT+TGG | - | chr7_2:63233207-63233226 | Msa1068240:intron | 35.0% |
| !!! | CATTACCCTTGTTTTTGTCT+TGG | - | chr7_2:63233230-63233249 | Msa1068240:intron | 35.0% |
| TGTCACCAAGACAAAAACAA+GGG | + | chr7_2:63233238-63233257 | None:intergenic | 35.0% | |
| ATGTCACCAAGACAAAAACA+AGG | + | chr7_2:63233239-63233258 | None:intergenic | 35.0% | |
| TAAGCACGGTGTAATTATAC+AGG | - | chr7_2:63233363-63233382 | Msa1068240:intron | 35.0% | |
| ATTATACAGGATGCTTCATG+AGG | - | chr7_2:63233376-63233395 | Msa1068240:intron | 35.0% | |
| TAAGCACGGTGTAATTATAC+AGG | - | chr7_2:63233363-63233382 | Msa1068240:intron | 35.0% | |
| !! | GGATGATTGGTGTCAAGAAA+TGG | + | chr7_2:63229212-63229231 | None:intergenic | 40.0% |
| AGTTACCATGGTGAGTGAAA+AGG | + | chr7_2:63229261-63229280 | None:intergenic | 40.0% | |
| AGAAGCAAAGCAAGTTACCA+TGG | + | chr7_2:63229273-63229292 | None:intergenic | 40.0% | |
| ! | CTTAACCCACTAGTTTCCAA+AGG | - | chr7_2:63229377-63229396 | Msa1068240:CDS | 40.0% |
| ! | CCTTTCCTTTGGAAACTAGT+GGG | + | chr7_2:63229385-63229404 | None:intergenic | 40.0% |
| ! | CCACTAGTTTCCAAAGGAAA+GGG | - | chr7_2:63229383-63229402 | Msa1068240:CDS | 40.0% |
| ! | CACTAGTTTCCAAAGGAAAG+GGG | - | chr7_2:63229384-63229403 | Msa1068240:CDS | 40.0% |
| !! | GACCAGGTTTTATACAGACT+TGG | + | chr7_2:63229601-63229620 | None:intergenic | 40.0% |
| GTCTGTATAAAACCTGGTCA+TGG | - | chr7_2:63229602-63229621 | Msa1068240:CDS | 40.0% | |
| ATGGAATAGAATCCATGACC+AGG | + | chr7_2:63229617-63229636 | None:intergenic | 40.0% | |
| AGAATGTGGACAAAGAAGGA+TGG | + | chr7_2:63229636-63229655 | None:intergenic | 40.0% | |
| ! | TCTTGTTTGATATTGGTCCC+TGG | - | chr7_2:63230127-63230146 | Msa1068240:CDS | 40.0% |
| ! | AGTTTTCTTAACTAGTGCCC+CGG | + | chr7_2:63230227-63230246 | None:intergenic | 40.0% |
| AAAACTAATGGTGTGCCACA+TGG | - | chr7_2:63230384-63230403 | Msa1068240:CDS | 40.0% | |
| GCATGTAATATTGGTCCATG+TGG | + | chr7_2:63230402-63230421 | None:intergenic | 40.0% | |
| GACCAATATTACATGCATCG+TGG | - | chr7_2:63230406-63230425 | Msa1068240:CDS | 40.0% | |
| TGCCACGATGCATGTAATAT+TGG | + | chr7_2:63230411-63230430 | None:intergenic | 40.0% | |
| ATCTGTGATCATAGCTCAGT+TGG | + | chr7_2:63230714-63230733 | None:intergenic | 40.0% | |
| TTAACGTAAGATGGAAGGAG+AGG | - | chr7_2:63230896-63230915 | Msa1068240:intron | 40.0% | |
| TGGAAGGAGAGGATAATTCA+TGG | - | chr7_2:63230907-63230926 | Msa1068240:intron | 40.0% | |
| TAGAAGAATGGGGTCAAACA+AGG | + | chr7_2:63231495-63231514 | None:intergenic | 40.0% | |
| TTCAAGCTTCAAGCTCAAAG+AGG | - | chr7_2:63231573-63231592 | Msa1068240:intron | 40.0% | |
| GTTATCTGTGGAGGATTTAG+AGG | - | chr7_2:63232235-63232254 | Msa1068240:intron | 40.0% | |
| GAGGGAACAAGGAAGATAAA+GGG | - | chr7_2:63232327-63232346 | Msa1068240:intron | 40.0% | |
| TGATCAAATAGACTCACCTC+AGG | + | chr7_2:63232386-63232405 | None:intergenic | 40.0% | |
| TTGATCAGTTCCATCTCAAG+AGG | - | chr7_2:63232399-63232418 | Msa1068240:intron | 40.0% | |
| !!! | TTTTTTATCACCCGGTGGAA+CGG | + | chr7_2:63232520-63232539 | None:intergenic | 40.0% |
| GGTACATACATAGAAGAGCA+AGG | + | chr7_2:63232604-63232623 | None:intergenic | 40.0% | |
| AGATACAGGAAGAACATCGT+TGG | + | chr7_2:63232737-63232756 | None:intergenic | 40.0% | |
| ! | GAAAGCTTTTTGTTCGAGTG+GGG | + | chr7_2:63232779-63232798 | None:intergenic | 40.0% |
| ! | GTGAAAGCTTTTTGTTCGAG+TGG | + | chr7_2:63232781-63232800 | None:intergenic | 40.0% |
| ! | AGCTTCCGTGAAGCAATTTT+TGG | - | chr7_2:63232967-63232986 | Msa1068240:intron | 40.0% |
| CATTGCTCGTTCTTTATGTC+AGG | - | chr7_2:63233256-63233275 | Msa1068240:intron | 40.0% | |
| CTTTATGTCAGGTTACTCCA+TGG | - | chr7_2:63233267-63233286 | Msa1068240:five_prime_UTR | 40.0% | |
| CAGATGTCTTCGTTTAAGCA+CGG | - | chr7_2:63233349-63233368 | Msa1068240:intron | 40.0% | |
| TGTTCAAATCATCCTCATCC+AGG | + | chr7_2:63233406-63233425 | None:intergenic | 40.0% | |
| CAGATGTCTTCGTTTAAGCA+CGG | - | chr7_2:63233349-63233368 | Msa1068240:intron | 40.0% | |
| AAGAAATGGTGCTCTGCACT+AGG | + | chr7_2:63229198-63229217 | None:intergenic | 45.0% | |
| ! | CCCACTAGTTTCCAAAGGAA+AGG | - | chr7_2:63229382-63229401 | Msa1068240:CDS | 45.0% |
| ! | CCCTTTCCTTTGGAAACTAG+TGG | + | chr7_2:63229386-63229405 | None:intergenic | 45.0% |
| ! | TAATCGGGAGGTTGATCAAG+AGG | - | chr7_2:63229416-63229435 | Msa1068240:CDS | 45.0% |
| GTCATGTTAACCACTGTCTC+CGG | - | chr7_2:63230205-63230224 | Msa1068240:intron | 45.0% | |
| TCATGTTAACCACTGTCTCC+GGG | - | chr7_2:63230206-63230225 | Msa1068240:intron | 45.0% | |
| ATTCCTTAACATGTGCCACG+AGG | - | chr7_2:63230327-63230346 | Msa1068240:CDS | 45.0% | |
| TTCCTTAACATGTGCCACGA+GGG | - | chr7_2:63230328-63230347 | Msa1068240:CDS | 45.0% | |
| TGATATCGGTCCTTGCACTT+TGG | - | chr7_2:63230508-63230527 | Msa1068240:five_prime_UTR | 45.0% | |
| GAGACCAATTCCAAAGTGCA+AGG | + | chr7_2:63230521-63230540 | None:intergenic | 45.0% | |
| TGATCATAGCTCAGTTGGCA+AGG | + | chr7_2:63230709-63230728 | None:intergenic | 45.0% | |
| TCCTTGAACCAGTTGTTCCA+CGG | - | chr7_2:63229567-63229586 | Msa1068240:CDS | 45.0% | |
| AGAATGGGGTCAAACAAGGA+TGG | + | chr7_2:63231491-63231510 | None:intergenic | 45.0% | |
| CACAGATAACTCCTCATGGA+TGG | + | chr7_2:63232225-63232244 | None:intergenic | 45.0% | |
| CATCCATGAGGAGTTATCTG+TGG | - | chr7_2:63232223-63232242 | Msa1068240:intron | 45.0% | |
| ATCTGTGGAGGATTTAGAGG+CGG | - | chr7_2:63232238-63232257 | Msa1068240:intron | 45.0% | |
| TCTAGACGGTGATGAACTGT+TGG | - | chr7_2:63232271-63232290 | Msa1068240:intron | 45.0% | |
| CTAGACGGTGATGAACTGTT+GGG | - | chr7_2:63232272-63232291 | Msa1068240:intron | 45.0% | |
| TAGACGGTGATGAACTGTTG+GGG | - | chr7_2:63232273-63232292 | Msa1068240:intron | 45.0% | |
| CGAGGGAACAAGGAAGATAA+AGG | - | chr7_2:63232326-63232345 | Msa1068240:intron | 45.0% | |
| GTTTCTCCATTTGCCTGAAG+AGG | + | chr7_2:63232715-63232734 | None:intergenic | 45.0% | |
| TTGGGACTGATCAAATGGAG+TGG | + | chr7_2:63232908-63232927 | None:intergenic | 45.0% | |
| !! | TCAGGTTGGGACTGATCAAA+TGG | + | chr7_2:63232913-63232932 | None:intergenic | 45.0% |
| TGAGTGTGGTGTACTGTTTG+TGG | + | chr7_2:63232941-63232960 | None:intergenic | 45.0% | |
| TGTACCATTCCTCTACTTCC+CGG | - | chr7_2:63233107-63233126 | Msa1068240:intron | 45.0% | |
| ATCAGCTTTACGCGTTCATG+TGG | - | chr7_2:63233146-63233165 | Msa1068240:intron | 45.0% | |
| CAAATGCAATAAGAGGCAGC+TGG | + | chr7_2:63233191-63233210 | None:intergenic | 45.0% | |
| TACTCAAGATGAGGTTGTCC+TGG | - | chr7_2:63233308-63233327 | Msa1068240:intron | 45.0% | |
| CGTTCAAATCATCCTCATCC+AGG | + | chr7_2:63233329-63233348 | None:intergenic | 45.0% | |
| GATGCTTCATGAGGTTATCC+TGG | - | chr7_2:63233385-63233404 | Msa1068240:intron | 45.0% | |
| TCATGAGGTTATCCTGGATG+AGG | - | chr7_2:63233391-63233410 | Msa1068240:intron | 45.0% | |
| !! | TATTTAAATTTAATTATCAT+TGG | - | chr7_2:63230817-63230836 | Msa1068240:intron | 5.0% |
| !! | ATTTAAATTTAATTATCATT+GGG | - | chr7_2:63230818-63230837 | Msa1068240:intron | 5.0% |
| !!! | GTAATTTTTTAAAATTTTAT+TGG | - | chr7_2:63231110-63231129 | Msa1068240:intron | 5.0% |
| !! | CTTGGCCTTTTCACTCACCA+TGG | - | chr7_2:63229253-63229272 | Msa1068240:three_prime_UTR | 50.0% |
| TTTCCAAAGGAAAGGGGCTC+CGG | - | chr7_2:63229390-63229409 | Msa1068240:CDS | 50.0% | |
| ATCAACCTCCCGATTACCAC+CGG | + | chr7_2:63229412-63229431 | None:intergenic | 50.0% | |
| ! | GACGTGGAACAACTGGTTCA+AGG | + | chr7_2:63229571-63229590 | None:intergenic | 50.0% |
| TGAACCAGTTGTTCCACGTC+AGG | - | chr7_2:63229571-63229590 | Msa1068240:CDS | 50.0% | |
| GAACCAGTTGTTCCACGTCA+GGG | - | chr7_2:63229572-63229591 | Msa1068240:CDS | 50.0% | |
| ATACCCTGACGTGGAACAAC+TGG | + | chr7_2:63229578-63229597 | None:intergenic | 50.0% | |
| CATGTTAACCACTGTCTCCG+GGG | - | chr7_2:63230207-63230226 | Msa1068240:intron | 50.0% | |
| AATGTTAACTGGTGCCCTCG+TGG | + | chr7_2:63230345-63230364 | None:intergenic | 50.0% | |
| !! | CGGTCCTTGCACTTTGGAAT+TGG | - | chr7_2:63230514-63230533 | Msa1068240:five_prime_UTR | 50.0% |
| ATACCATGCCGTGGAACAAC+TGG | + | chr7_2:63231430-63231449 | None:intergenic | 50.0% | |
| ! | GCAATTAGGTTGTTGGCCGT+TGG | - | chr7_2:63231937-63231956 | Msa1068240:intron | 50.0% |
| ! | AATTGCTCGGGGGGTTGATT+TGG | - | chr7_2:63231971-63231990 | Msa1068240:intron | 50.0% |
| TTGCATGAAGGCCATCCATG+AGG | - | chr7_2:63232211-63232230 | Msa1068240:intron | 50.0% | |
| CCTCCACAGATAACTCCTCA+TGG | + | chr7_2:63232229-63232248 | None:intergenic | 50.0% | |
| CCATGAGGAGTTATCTGTGG+AGG | - | chr7_2:63232226-63232245 | Msa1068240:intron | 50.0% | |
| ! | GCGGTTGAGGCATTTCTAGA+CGG | - | chr7_2:63232257-63232276 | Msa1068240:intron | 50.0% |
| GGAGATTTGTGGAAGCTCGA+GGG | - | chr7_2:63232309-63232328 | Msa1068240:intron | 50.0% | |
| CTTACAGGTTTCCGTTCCAC+CGG | - | chr7_2:63232506-63232525 | Msa1068240:intron | 50.0% | |
| TTACAGGTTTCCGTTCCACC+GGG | - | chr7_2:63232507-63232526 | Msa1068240:intron | 50.0% | |
| AGTCTCTGTAGCATGCTTGC+TGG | - | chr7_2:63232570-63232589 | Msa1068240:intron | 50.0% | |
| GTCTCTGTAGCATGCTTGCT+GGG | - | chr7_2:63232571-63232590 | Msa1068240:intron | 50.0% | |
| CTTGCTCCTCTTCAGGCAAA+TGG | - | chr7_2:63232706-63232725 | Msa1068240:intron | 50.0% | |
| AGTAGAAACCCATGTTCGCG+TGG | + | chr7_2:63232841-63232860 | None:intergenic | 50.0% | |
| CGGAAGCTTACTAGTGAGTG+TGG | + | chr7_2:63232955-63232974 | None:intergenic | 50.0% | |
| ! | GCGGTGATTTGCGCAATTTC+TGG | + | chr7_2:63233000-63233019 | None:intergenic | 50.0% |
| TGCCACTAGCACTTAGACTG+CGG | - | chr7_2:63233058-63233077 | Msa1068240:intron | 50.0% | |
| AAGCTGATGCCTTGCGTAAC+AGG | + | chr7_2:63233134-63233153 | None:intergenic | 50.0% | |
| TTACGCGTTCATGTGGCTTG+CGG | - | chr7_2:63233153-63233172 | Msa1068240:intron | 50.0% | |
| AGATGAGGTTGTCCTGGATG+AGG | - | chr7_2:63233314-63233333 | Msa1068240:intron | 50.0% | |
| AAAGGGGCTCCGGTGGTAAT+CGG | - | chr7_2:63229400-63229419 | Msa1068240:CDS | 55.0% | |
| CAGACTTGGATACCCTGACG+TGG | + | chr7_2:63229587-63229606 | None:intergenic | 55.0% | |
| TGCCCTCGTGGCACATGTTA+AGG | + | chr7_2:63230333-63230352 | None:intergenic | 55.0% | |
| ! | GCCGTGGAACAACTGGTTCA+AGG | + | chr7_2:63231423-63231442 | None:intergenic | 55.0% |
| GAACCAGTTGTTCCACGGCA+TGG | - | chr7_2:63231424-63231443 | Msa1068240:intron | 55.0% | |
| CAGACTTGGATACCATGCCG+TGG | + | chr7_2:63231439-63231458 | None:intergenic | 55.0% | |
| GGAGGATTTAGAGGCGGTTG+AGG | - | chr7_2:63232244-63232263 | Msa1068240:intron | 55.0% | |
| CGGAGATTTGTGGAAGCTCG+AGG | - | chr7_2:63232308-63232327 | Msa1068240:intron | 55.0% | |
| TGTGGAAGCTCGAGGGAACA+AGG | - | chr7_2:63232316-63232335 | Msa1068240:intron | 55.0% | |
| TCCATTTCGCCACGCGAACA+TGG | - | chr7_2:63232829-63232848 | Msa1068240:intron | 55.0% | |
| CCATTTCGCCACGCGAACAT+GGG | - | chr7_2:63232830-63232849 | Msa1068240:intron | 55.0% | |
| AGCCGCAGTCTAAGTGCTAG+TGG | + | chr7_2:63233063-63233082 | None:intergenic | 55.0% | |
| AGGTCCGGGAAGTAGAGGAA+TGG | + | chr7_2:63233114-63233133 | None:intergenic | 55.0% | |
| GTAACAGGTCCGGGAAGTAG+AGG | + | chr7_2:63233119-63233138 | None:intergenic | 55.0% | |
| ATGCCTTGCGTAACAGGTCC+GGG | + | chr7_2:63233128-63233147 | None:intergenic | 55.0% | |
| GATGCCTTGCGTAACAGGTC+CGG | + | chr7_2:63233129-63233148 | None:intergenic | 55.0% | |
| AAGGGGCTCCGGTGGTAATC+GGG | - | chr7_2:63229401-63229420 | Msa1068240:CDS | 60.0% | |
| AACTAGTGCCCCGGAGACAG+TGG | + | chr7_2:63230218-63230237 | None:intergenic | 60.0% | |
| CCCATGTTCGCGTGGCGAAA+TGG | + | chr7_2:63232833-63232852 | None:intergenic | 60.0% | |
| CTTCCCGGACCTGTTACGCA+AGG | - | chr7_2:63233122-63233141 | Msa1068240:intron | 60.0% | |
| CCACCGGAGCCCCTTTCCTT+TGG | + | chr7_2:63229396-63229415 | None:intergenic | 65.0% | |
| CCAAAGGAAAGGGGCTCCGG+TGG | - | chr7_2:63229393-63229412 | Msa1068240:CDS | 65.0% | |
| ! | CGCGTTCATGTGGCTTGCGG+CGG | - | chr7_2:63233156-63233175 | Msa1068240:intron | 65.0% |
| GGGCTCCGGTGGTAATCGGG+AGG | - | chr7_2:63229404-63229423 | Msa1068240:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 63229161 | 63233540 | 63229161 | ID=Msa1068240;Name=Msa1068240 |
| chr7_2 | mRNA | 63229161 | 63233540 | 63229161 | ID=Msa1068240-mRNA-1;Parent=Msa1068240;Name=Msa1068240-mRNA-1;_AED=0.27;_eAED=0.27;_QI=293|1|1|1|0.4|0.33|6|175|306 |
| chr7_2 | exon | 63229161 | 63229980 | 63229161 | ID=Msa1068240-mRNA-1:exon:13057;Parent=Msa1068240-mRNA-1 |
| chr7_2 | exon | 63230087 | 63230188 | 63230087 | ID=Msa1068240-mRNA-1:exon:13056;Parent=Msa1068240-mRNA-1 |
| chr7_2 | exon | 63230313 | 63230567 | 63230313 | ID=Msa1068240-mRNA-1:exon:13055;Parent=Msa1068240-mRNA-1 |
| chr7_2 | exon | 63230709 | 63230756 | 63230709 | ID=Msa1068240-mRNA-1:exon:13054;Parent=Msa1068240-mRNA-1 |
| chr7_2 | exon | 63233264 | 63233318 | 63233264 | ID=Msa1068240-mRNA-1:exon:13053;Parent=Msa1068240-mRNA-1 |
| chr7_2 | exon | 63233432 | 63233540 | 63233432 | ID=Msa1068240-mRNA-1:exon:13052;Parent=Msa1068240-mRNA-1 |
| chr7_2 | five_prime_UTR | 63233432 | 63233540 | 63233432 | ID=Msa1068240-mRNA-1:five_prime_utr;Parent=Msa1068240-mRNA-1 |
| chr7_2 | five_prime_UTR | 63233264 | 63233318 | 63233264 | ID=Msa1068240-mRNA-1:five_prime_utr;Parent=Msa1068240-mRNA-1 |
| chr7_2 | five_prime_UTR | 63230709 | 63230756 | 63230709 | ID=Msa1068240-mRNA-1:five_prime_utr;Parent=Msa1068240-mRNA-1 |
| chr7_2 | five_prime_UTR | 63230487 | 63230567 | 63230487 | ID=Msa1068240-mRNA-1:five_prime_utr;Parent=Msa1068240-mRNA-1 |
| chr7_2 | CDS | 63230313 | 63230486 | 63230313 | ID=Msa1068240-mRNA-1:cds;Parent=Msa1068240-mRNA-1 |
| chr7_2 | CDS | 63230087 | 63230188 | 63230087 | ID=Msa1068240-mRNA-1:cds;Parent=Msa1068240-mRNA-1 |
| chr7_2 | CDS | 63229336 | 63229980 | 63229336 | ID=Msa1068240-mRNA-1:cds;Parent=Msa1068240-mRNA-1 |
| chr7_2 | three_prime_UTR | 63229161 | 63229335 | 63229161 | ID=Msa1068240-mRNA-1:three_prime_utr;Parent=Msa1068240-mRNA-1 |
| Gene Sequence |
| Protein sequence |
