AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1030720


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1030720 MtrunA17_Chr7g0251871 96.637 565 19 0 1 565 1 565 0.0 1112
Msa1030720 MtrunA17_Chr5g0408921 59.825 570 211 6 1 557 1 565 0.0 648
Msa1030720 MtrunA17_Chr8g0369621 58.537 574 222 3 1 562 42 611 0.0 627
Msa1030720 MtrunA17_Chr3g0106801 38.113 551 293 13 7 552 7 514 2.30e-102 318
Msa1030720 MtrunA17_Chr4g0037301 32.675 557 338 14 2 552 10 535 5.79e-82 266
Msa1030720 MtrunA17_Chr5g0405621 33.510 567 328 16 5 563 11 536 1.25e-75 249
Msa1030720 MtrunA17_Chr3g0106821 36.765 408 220 9 1 404 1 374 4.16e-72 235
Msa1030720 MtrunA17_Chr2g0304561 29.663 563 365 11 3 551 8 553 1.67e-58 204
Msa1030720 MtrunA17_Chr4g0064981 28.596 570 369 14 3 551 7 559 2.20e-54 193
Msa1030720 MtrunA17_Chr7g0225191 25.044 571 396 11 7 552 15 578 2.36e-42 160
Msa1030720 MtrunA17_Chr3g0132161 25.473 581 370 14 5 556 13 559 2.01e-41 157
Msa1030720 MtrunA17_Chr7g0264861 26.598 579 381 16 7 565 29 583 4.00e-35 140
Msa1030720 MtrunA17_Chr5g0442481 25.265 566 368 12 7 560 11 533 3.19e-33 133
Msa1030720 MtrunA17_Chr1g0210274 25.483 569 387 13 7 563 26 569 9.22e-33 132
Msa1030720 MtrunA17_Chr1g0174101 25.614 570 381 15 7 561 24 565 1.54e-32 132
Msa1030720 MtrunA17_Chr1g0210291 25.350 572 379 16 7 561 25 565 6.19e-32 130
Msa1030720 MtrunA17_Chr1g0210284 25.308 569 388 14 7 563 26 569 7.91e-32 130
Msa1030720 MtrunA17_Chr2g0330551 24.061 586 369 17 5 563 5 541 1.65e-31 128
Msa1030720 MtrunA17_Chr1g0171591 23.785 576 397 13 7 563 24 576 4.13e-31 127
Msa1030720 MtrunA17_Chr3g0106831 38.636 132 71 2 420 551 1 122 2.72e-20 87.0
Msa1030720 MtrunA17_Chr2g0333371 26.562 256 146 7 296 551 76 289 1.90e-16 80.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1030720 AT5G45275.1 59.474 570 210 6 1 557 1 562 0.0 644
Msa1030720 AT4G19450.1 58.579 577 222 5 1 565 1 572 0.0 623
Msa1030720 AT1G31470.1 53.405 558 234 8 1 557 37 569 0.0 547
Msa1030720 AT3G01630.1 50.266 563 235 12 6 557 22 550 6.02e-175 506
Msa1030720 AT3G01630.2 50.266 563 235 12 6 557 40 568 6.51e-175 507
Msa1030720 AT4G19450.2 57.971 414 158 4 1 402 1 410 3.56e-152 443
Msa1030720 AT4G34950.1 33.509 570 340 16 7 561 16 561 1.95e-83 271
Msa1030720 AT2G30300.1 33.813 556 297 16 5 550 2 496 5.16e-79 258
Msa1030720 AT2G16660.1 32.969 549 330 15 7 550 14 529 1.14e-71 239
Msa1030720 AT1G80530.1 28.998 569 353 17 3 552 9 545 1.27e-49 180
Msa1030720 AT2G16660.2 32.828 396 236 11 7 399 14 382 8.17e-48 171
Msa1030720 AT5G50630.1 27.717 552 354 13 7 550 16 530 1.01e-47 175
Msa1030720 AT5G50520.1 27.717 552 354 13 7 550 16 530 1.01e-47 175
Msa1030720 AT3G01930.2 26.065 587 387 15 5 560 14 584 1.62e-43 164
Msa1030720 AT2G28120.1 26.049 572 383 14 7 565 17 561 5.63e-41 156
Msa1030720 AT5G14120.1 25.433 578 395 13 5 559 14 578 9.55e-40 153
Msa1030720 AT2G34355.1 27.018 570 341 16 7 556 7 521 7.57e-37 144
Msa1030720 AT1G74780.1 26.298 578 352 14 7 561 7 533 2.83e-36 142
Msa1030720 AT2G39210.1 23.363 565 404 13 7 561 21 566 8.46e-35 139
Msa1030720 AT2G34350.1 27.273 572 325 20 7 550 7 515 8.04e-34 135
Msa1030720 AT2G34350.2 27.273 572 325 20 7 550 7 515 8.04e-34 135
Msa1030720 AT1G18940.1 25.528 568 338 15 7 550 9 515 3.52e-32 130
Msa1030720 AT3G01930.3 25.060 419 273 10 5 396 14 418 2.05e-29 121
Msa1030720 AT3G01930.1 24.473 474 312 14 117 560 14 471 3.56e-21 97.1
Msa1030720 AT2G34355.2 30.876 217 136 6 345 556 164 371 1.80e-17 84.7

Find 123 sgRNAs with CRISPR-Local

Find 519 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGATCATGTCTGCTTTCT+TGG 0.152653 7_1:+64932591 Msa1030720:CDS
CAATTAGGCACAAGCTTAAT+TGG 0.183879 7_1:+64938508 Msa1030720:CDS
TCTGCTTTCTTGGGGCTTCT+TGG 0.215288 7_1:+64932601 Msa1030720:CDS
AACATCCTTGCCCTTGTTAC+AGG 0.229614 7_1:+64935113 Msa1030720:CDS
GTCCAAGTGATTGAGAAATT+TGG 0.236115 7_1:-64935577 None:intergenic
TCTATTACATCAGAACTATT+TGG 0.242469 7_1:+64938565 Msa1030720:CDS
TTCTTGGGGCTTCTTGGTTA+TGG 0.251188 7_1:+64932607 Msa1030720:CDS
CCTTTAGGTTCATGTCTCTA+TGG 0.252107 7_1:+64938634 Msa1030720:CDS
CATTACTTTGCCTTATTATC+TGG 0.258977 7_1:+64932657 Msa1030720:CDS
TTGATCATGTCTGCTTTCTT+GGG 0.259108 7_1:+64932592 Msa1030720:CDS
AAAGCATTTGGTTGGTGTTC+TGG 0.272670 7_1:+64932535 Msa1030720:CDS
TCTTTCAGTTGCATCAGATA+TGG 0.286301 7_1:+64932510 Msa1030720:CDS
CTTCCAACCACCAAGAAAAT+AGG 0.307063 7_1:-64932307 None:intergenic
GTTGAGGCAAATGAAAATTA+AGG 0.335941 7_1:-64935093 None:intergenic
CTCATCACAAACATTCCTTT+AGG 0.344275 7_1:+64938619 Msa1030720:CDS
ATAGGAGATGTATTATATCT+AGG 0.344566 7_1:-64932289 None:intergenic
GATTGGAGTGAGTACTAATA+AGG 0.354643 7_1:-64935009 None:intergenic
TTCATATTACTAGCCATATC+TGG 0.355416 7_1:+64938469 Msa1030720:CDS
GCTATATGCAGACATTTATA+TGG 0.357913 7_1:+64938749 Msa1030720:CDS
AGCTTAATTGGATTAAGTTC+TGG 0.367596 7_1:+64938520 Msa1030720:CDS
GATAATGATGCAATGAATAA+TGG 0.369939 7_1:+64935368 Msa1030720:CDS
TGAAAACTGACCAGATAATA+AGG 0.370421 7_1:-64932667 None:intergenic
TGGTGCTAATAGCAACAATT+TGG 0.381055 7_1:+64932395 Msa1030720:CDS
TCTTTGAGTGTTAGTTTCAA+TGG 0.382694 7_1:+64934888 Msa1030720:CDS
TTGCATTTCAATTGTTGGAT+TGG 0.386689 7_1:+64938777 Msa1030720:CDS
CTTTCAGTTGCATCAGATAT+GGG 0.392568 7_1:+64932511 Msa1030720:CDS
GGGCATTGAGCAAGAGATAG+AGG 0.396035 7_1:-64934968 None:intergenic
TCAGATATGGGAAAAGCATT+TGG 0.415227 7_1:+64932523 Msa1030720:CDS
TGGTTCATACCAACACTGTT+TGG 0.421752 7_1:-64938589 None:intergenic
TAGGAGATGTATTATATCTA+GGG 0.425678 7_1:-64932288 None:intergenic
TGTCGGCGCGATTATTCTCC+TGG 0.434180 7_1:+64935196 Msa1030720:CDS
GGGACGATGAGAGGGAATAT+AGG 0.435845 7_1:-64935151 None:intergenic
GCATACCTGCTGAATAAATC+AGG 0.436639 7_1:-64935674 None:intergenic
AAGATACACTTTGCAAGAAC+TGG 0.438112 7_1:+64938409 Msa1030720:CDS
CAAGCAGAAGAGATTCAATA+TGG 0.439295 7_1:+64938692 Msa1030720:CDS
ATCCGTCATGGGCACGGGGC+GGG 0.440803 7_1:-64932225 None:intergenic
TGGAGTTGCATTTCAATTGT+TGG 0.445337 7_1:+64938772 Msa1030720:CDS
GGATAGCACGAGCTATGGTT+GGG 0.447034 7_1:-64935172 None:intergenic
TCTCTTGAATACACAATGTA+TGG 0.447921 7_1:-64935236 None:intergenic
TCATATAAAGAAAAGCTTGT+AGG 0.448857 7_1:-64935278 None:intergenic
GGCCAAATTTCTCAATCACT+TGG 0.449862 7_1:+64935575 Msa1030720:CDS
CATATAAAGAAAAGCTTGTA+GGG 0.451963 7_1:-64935277 None:intergenic
ATTGGTTTATAGTAATAACT+TGG 0.455139 7_1:+64935553 Msa1030720:CDS
ACTAAAACAGCATTACAATT+AGG 0.459971 7_1:+64938493 Msa1030720:CDS
GCTAGTAATATGAAGGCAAT+TGG 0.460896 7_1:-64938460 None:intergenic
TCCGCGGGTACCCGCGGGCA+CGG 0.464385 7_1:+64932252 Msa1030720:five_prime_UTR
ATAAAATCCGTCATGGGCAC+GGG 0.471422 7_1:-64932230 None:intergenic
ATCGCGATTGCGACAATGAA+GGG 0.472411 7_1:-64935069 None:intergenic
CAAAGAACTAATTAGTATAG+AGG 0.473701 7_1:+64935346 Msa1030720:CDS
GATAAAATCCGTCATGGGCA+CGG 0.480887 7_1:-64932231 None:intergenic
TGATCATGTCTGCTTTCTTG+GGG 0.484019 7_1:+64932593 Msa1030720:CDS
TCCGTGCCCGCGGGTACCCG+CGG 0.484274 7_1:-64932253 None:intergenic
TTGCAGGGTGTAGCATCTGC+TGG 0.486473 7_1:+64934802 Msa1030720:CDS
AAGGAGAAACTTACAATGCT+TGG 0.486978 7_1:+64935446 Msa1030720:CDS
ATAGCTCGTGCTATCCTTGT+CGG 0.494834 7_1:+64935179 Msa1030720:CDS
GAGGTAGATGCCTGTAACAA+GGG 0.495103 7_1:-64935123 None:intergenic
ATTGTTTGAGTTTATTGCAT+TGG 0.499242 7_1:-64934940 None:intergenic
GCTGCGGCTGTGGTTGGTAA+AGG 0.501986 7_1:-64935031 None:intergenic
TATTGAATCTCTTCTGCTTG+TGG 0.505269 7_1:-64938689 None:intergenic
GGCAATTGGTGTTGGTATCA+AGG 0.505973 7_1:-64938446 None:intergenic
AGGATAGCACGAGCTATGGT+TGG 0.507744 7_1:-64935173 None:intergenic
AATCGCGATTGCGACAATGA+AGG 0.508838 7_1:-64935070 None:intergenic
TGTTTGTGATGAGGATATTG+TGG 0.514424 7_1:-64938609 None:intergenic
CAACTAAGATGTTGATTCGT+AGG 0.514950 7_1:+64935480 Msa1030720:CDS
TAAGATGTTGATTCGTAGGT+GGG 0.515127 7_1:+64935484 Msa1030720:CDS
ATTTGGATACAAGCATTCAC+AGG 0.516938 7_1:+64932412 Msa1030720:CDS
TGAGTACTAATAAGGAAATG+AGG 0.518574 7_1:-64935001 None:intergenic
CTGCACCTGATTTATTCAGC+AGG 0.520045 7_1:+64935669 Msa1030720:CDS
TTGTGGAGGAACAATTGGAT+TGG 0.525853 7_1:+64935535 Msa1030720:CDS
AGAGGGAATATAGGAAGAGG+AGG 0.527050 7_1:-64935142 None:intergenic
TAAAACTAGAAACAGAATAC+AGG 0.529981 7_1:+64938858 Msa1030720:CDS
ATGAGAGGGAATATAGGAAG+AGG 0.530026 7_1:-64935145 None:intergenic
ACATTGTGTATTCAAGAGAA+TGG 0.534568 7_1:+64935240 Msa1030720:CDS
GGAGAATAATCGCGCCGACA+AGG 0.541352 7_1:-64935193 None:intergenic
TACCCGCCCCGTGCCCATGA+CGG 0.541889 7_1:+64932223 Msa1030720:five_prime_UTR
TGGTTGGAGAATCAAGAAAG+TGG 0.541955 7_1:+64932371 Msa1030720:CDS
CCATAGAGACATGAACCTAA+AGG 0.546267 7_1:-64938634 None:intergenic
TTGGTTTATAGTAATAACTT+GGG 0.550183 7_1:+64935554 Msa1030720:CDS
GCAAGAACAAAAGCATTGCC+AGG 0.555374 7_1:-64935214 None:intergenic
TAAAGAAAAGCTTGTAGGGA+GGG 0.563603 7_1:-64935273 None:intergenic
AGATATGGCTAGTAATATGA+AGG 0.564480 7_1:-64938467 None:intergenic
CCCGCGGATAAAATCCGTCA+TGG 0.565072 7_1:-64932237 None:intergenic
GACAAGGATAGCACGAGCTA+TGG 0.566041 7_1:-64935177 None:intergenic
GGAGGTAGATGCCTGTAACA+AGG 0.569196 7_1:-64935124 None:intergenic
ATATGGGAAAAGCATTTGGT+TGG 0.569888 7_1:+64932527 Msa1030720:CDS
GCGTGAGATGTCAATGTGCA+TGG 0.571775 7_1:+64938717 Msa1030720:CDS
CTATGGTTGGGGACGATGAG+AGG 0.572101 7_1:-64935160 None:intergenic
AATATGAAGGCAATTGGTGT+TGG 0.576887 7_1:-64938454 None:intergenic
TAAAATCCGTCATGGGCACG+GGG 0.587392 7_1:-64932229 None:intergenic
GGCTGTGGTTGGTAAAGGAT+TGG 0.587777 7_1:-64935026 None:intergenic
CTATTTGGTCCAAACAGTGT+TGG 0.591863 7_1:+64938580 Msa1030720:CDS
TATGCATAATACATAGCAGA+CGG 0.594003 7_1:-64934832 None:intergenic
TAACAAGGGCAAGGATGTTG+AGG 0.594679 7_1:-64935109 None:intergenic
ATTTCTCAATCACTTGGACA+TGG 0.596596 7_1:+64935581 Msa1030720:CDS
AATCAGGTGCAGCTGCAAGA+AGG 0.596861 7_1:-64935658 None:intergenic
CATAAACTAATGCTGCAAGA+AGG 0.600173 7_1:-64938657 None:intergenic
GGTTGGAGAATCAAGAAAGT+GGG 0.601920 7_1:+64932372 Msa1030720:CDS
AATCCGTCATGGGCACGGGG+CGG 0.602128 7_1:-64932226 None:intergenic
CTAAAGGAATGTTTGTGATG+AGG 0.602675 7_1:-64938618 None:intergenic
TATGGTTGGGGACGATGAGA+GGG 0.603565 7_1:-64935159 None:intergenic
CTAAGATGTTGATTCGTAGG+TGG 0.604667 7_1:+64935483 Msa1030720:CDS
AGGAAATGAGGAGAGGAACA+AGG 0.605408 7_1:-64934989 None:intergenic
TACACTTTGCAAGAACTGGA+TGG 0.607991 7_1:+64938413 Msa1030720:CDS
GGCATTGAGCAAGAGATAGA+GGG 0.611736 7_1:-64934967 None:intergenic
AGATGCCTGTAACAAGGGCA+AGG 0.615965 7_1:-64935118 None:intergenic
CCGCGGATAAAATCCGTCAT+GGG 0.623567 7_1:-64932236 None:intergenic
ATGATCAAAACCACCCACAA+AGG 0.629769 7_1:-64932577 None:intergenic
GCGACAATGAAGGGTGTCGG+TGG 0.631200 7_1:-64935060 None:intergenic
ATATGCAGACATTTATATGG+TGG 0.633501 7_1:+64938752 Msa1030720:CDS
ATTGCGACAATGAAGGGTGT+CGG 0.634367 7_1:-64935063 None:intergenic
CGTGAGATGTCAATGTGCAT+GGG 0.634470 7_1:+64938718 Msa1030720:CDS
GATAGCACGAGCTATGGTTG+GGG 0.635987 7_1:-64935171 None:intergenic
ATAAAGAAAAGCTTGTAGGG+AGG 0.638767 7_1:-64935274 None:intergenic
ACTAATAAGGAAATGAGGAG+AGG 0.640029 7_1:-64934996 None:intergenic
TTCTGATGTAATAGAAACTG+CGG 0.652391 7_1:-64938557 None:intergenic
GGAAATGAGGAGAGGAACAA+GGG 0.653958 7_1:-64934988 None:intergenic
AGATGTATTATATCTAGGGG+TGG 0.656925 7_1:-64932284 None:intergenic
TCAAAGATAATGCAAGTGAA+CGG 0.657636 7_1:-64934872 None:intergenic
TTTGGATACAAGCATTCACA+GGG 0.664994 7_1:+64932413 Msa1030720:CDS
AGGAGATGTATTATATCTAG+GGG 0.667410 7_1:-64932287 None:intergenic
AGATGTCAATGTGCATGGGA+AGG 0.679584 7_1:+64938722 Msa1030720:CDS
TGATGTAATAGAAACTGCGG+CGG 0.687415 7_1:-64938554 None:intergenic
TGGAGAATCAAGAAAGTGGG+TGG 0.726199 7_1:+64932375 Msa1030720:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATAATTGTCTATTTAAAT+TGG - chr7_1:64933716-64933735 None:intergenic 10.0%
!! TAAAATTAGATTAAATGATT+TGG + chr7_1:64934484-64934503 Msa1030720:intron 10.0%
!! AAAATTAGATTAAATGATTT+GGG + chr7_1:64934485-64934504 Msa1030720:intron 10.0%
!!! TATTTAATTTTCAAAGGTTA+AGG + chr7_1:64933380-64933399 Msa1030720:intron 15.0%
!!! AAATTAAATACGAATTTTGT+TGG + chr7_1:64933508-64933527 Msa1030720:intron 15.0%
!!! AATTAAATACGAATTTTGTT+GGG + chr7_1:64933509-64933528 Msa1030720:intron 15.0%
!! TACTTATATATTACTTAAAG+AGG - chr7_1:64933538-64933557 None:intergenic 15.0%
!!! TTTCAATGATTTTTTTTTAG+AGG - chr7_1:64933922-64933941 None:intergenic 15.0%
!! AAAACTTAAATGACTTATAT+AGG - chr7_1:64934006-64934025 None:intergenic 15.0%
!!! CATGTAATTATACTTTTTTT+AGG - chr7_1:64935742-64935761 None:intergenic 15.0%
!!! CTAAAAAAAGTATAATTACA+TGG + chr7_1:64935740-64935759 Msa1030720:intron 15.0%
!! TAAAAAAAAAATACCAGAAA+GGG - chr7_1:64937587-64937606 None:intergenic 15.0%
!! ATAAAAAAAAAATACCAGAA+AGG - chr7_1:64937586-64937605 None:intergenic 15.0%
!! ATAAAAAAAAAATACCAGAA+AGG + chr7_1:64937586-64937605 Msa1030720:intron 15.0%
!! TAAAAAAAAAATACCAGAAA+GGG + chr7_1:64937587-64937606 Msa1030720:intron 15.0%
!! TATTAAGATTAAGAAAATGA+TGG + chr7_1:64937707-64937726 Msa1030720:intron 15.0%
!! CTTAATCTAAAAAAAAGAAA+CGG - chr7_1:64937926-64937945 None:intergenic 15.0%
!! TTAATGAAATAAGATGAAAA+TGG + chr7_1:64938000-64938019 Msa1030720:intron 15.0%
!! TTATGAAAATACTATTTCAA+AGG - chr7_1:64938168-64938187 None:intergenic 15.0%
!!! TATTTTCATAACTAAATGAA+TGG + chr7_1:64938177-64938196 Msa1030720:intron 15.0%
!! TCTAATACCATCTTAAAATT+TGG + chr7_1:64933145-64933164 Msa1030720:intron 20.0%
!! CTAATACCATCTTAAAATTT+GGG + chr7_1:64933146-64933165 Msa1030720:intron 20.0%
!!! GTTTGAAATGAGTTTATAAA+GGG - chr7_1:64933222-64933241 None:intergenic 20.0%
!!! AAAATACTCTGTTTCTAATA+TGG - chr7_1:64933351-64933370 None:intergenic 20.0%
!!! ATTAAATACGAATTTTGTTG+GGG + chr7_1:64933510-64933529 Msa1030720:intron 20.0%
!!! AAGAAATCAAATCTTTCTTT+TGG - chr7_1:64933822-64933841 None:intergenic 20.0%
!! AATAAACAAAATGTGTGAAA+AGG - chr7_1:64934042-64934061 None:intergenic 20.0%
!! AAAAATTTAAATTAGGCAAG+AGG - chr7_1:64934166-64934185 None:intergenic 20.0%
!!! AAGTATTTTCCTTAACTTTA+AGG - chr7_1:64934233-64934252 None:intergenic 20.0%
!! TCTCATTTATTTACCTTAAA+CGG - chr7_1:64934546-64934565 None:intergenic 20.0%
!!! TATTACATTGCATATTTTTG+TGG + chr7_1:64935518-64935537 Msa1030720:CDS 20.0%
!!! ATTGGTTTATAGTAATAACT+TGG + chr7_1:64935553-64935572 Msa1030720:CDS 20.0%
!! TTGGTTTATAGTAATAACTT+GGG + chr7_1:64935554-64935573 Msa1030720:CDS 20.0%
!!! TTCTTTAGTCATATACATTT+TGG - chr7_1:64935933-64935952 None:intergenic 20.0%
!!! TCAGATTTGGAAATTTTTTT+GGG - chr7_1:64937641-64937660 None:intergenic 20.0%
!! TTCTGTATATAATTGTCAAA+GGG - chr7_1:64937616-64937635 None:intergenic 20.0%
!! TTTCTGTATATAATTGTCAA+AGG - chr7_1:64937615-64937634 None:intergenic 20.0%
!! AAAAAAAAAATACCAGAAAG+GGG - chr7_1:64937588-64937607 None:intergenic 20.0%
!! AAAGAATAGTTTGATATTTG+CGG - chr7_1:64936845-64936864 None:intergenic 20.0%
!! GGAAGTCATAATTTAAATTT+AGG + chr7_1:64937232-64937251 Msa1030720:intron 20.0%
!! GTCATAATTTAAATTTAGGT+TGG + chr7_1:64937236-64937255 Msa1030720:intron 20.0%
!! AAAAAAAAAATACCAGAAAG+GGG + chr7_1:64937588-64937607 Msa1030720:intron 20.0%
!! TTTCTGTATATAATTGTCAA+AGG + chr7_1:64937615-64937634 Msa1030720:intron 20.0%
!! TTCTGTATATAATTGTCAAA+GGG + chr7_1:64937616-64937635 Msa1030720:intron 20.0%
!!! TCAGATTTGGAAATTTTTTT+GGG + chr7_1:64937641-64937660 Msa1030720:intron 20.0%
! TAGGAGATGTATTATATCTA+GGG - chr7_1:64932291-64932310 None:intergenic 25.0%
! ATAGGAGATGTATTATATCT+AGG - chr7_1:64932292-64932311 None:intergenic 25.0%
!! TAATACATCTCCTATTTTCT+TGG + chr7_1:64932297-64932316 Msa1030720:five_prime_UTR 25.0%
!! GTTGACTATGTTATGAATTT+TGG + chr7_1:64932803-64932822 Msa1030720:intron 25.0%
!! AACTAGCAACAAGTAATTTT+TGG + chr7_1:64932827-64932846 Msa1030720:intron 25.0%
! AATTATGACTAGATTAGATG+AGG + chr7_1:64932899-64932918 Msa1030720:intron 25.0%
!! GGTTTGAAATGAGTTTATAA+AGG - chr7_1:64933223-64933242 None:intergenic 25.0%
! TCTTACATTGAATAGAGATA+AGG - chr7_1:64933247-64933266 None:intergenic 25.0%
! TTCTTGACATATACCTAATT+AGG + chr7_1:64933280-64933299 Msa1030720:intron 25.0%
!!! AAACAGAGTATTTTGAAACA+GGG + chr7_1:64933357-64933376 Msa1030720:intron 25.0%
!!! ACAGGGTATTTAATTTTCAA+AGG + chr7_1:64933374-64933393 Msa1030720:intron 25.0%
! GGCATATTATGTGTATTATT+TGG - chr7_1:64933458-64933477 None:intergenic 25.0%
!!! ATTTTTTAGAATCCGTTTGA+TGG - chr7_1:64933492-64933511 None:intergenic 25.0%
! ATTTAAATTGGTCAATGTCA+TGG - chr7_1:64933704-64933723 None:intergenic 25.0%
!! AGATTATCATACGTTAGTTT+AGG - chr7_1:64933861-64933880 None:intergenic 25.0%
!! CACAATTTTCCATTATGTTA+CGG + chr7_1:64934074-64934093 Msa1030720:intron 25.0%
!! CTAATTTTAAATTAGGCAAC+CGG - chr7_1:64934473-64934492 None:intergenic 25.0%
!! AGTCAAAATTTTACCGTTTA+AGG + chr7_1:64934530-64934549 Msa1030720:intron 25.0%
! ATTACAATAGGTAAAGATTG+GGG - chr7_1:64934584-64934603 None:intergenic 25.0%
! CATTACAATAGGTAAAGATT+GGG - chr7_1:64934585-64934604 None:intergenic 25.0%
! ACATTACAATAGGTAAAGAT+TGG - chr7_1:64934586-64934605 None:intergenic 25.0%
!! TACATGCTCATAAATCTTTT+AGG + chr7_1:64934702-64934721 Msa1030720:intron 25.0%
! ATATTCTTGTATTATACTGC+AGG + chr7_1:64934761-64934780 Msa1030720:intron 25.0%
!! ATTGTTTGAGTTTATTGCAT+TGG - chr7_1:64934943-64934962 None:intergenic 25.0%
! CATATAAAGAAAAGCTTGTA+GGG - chr7_1:64935280-64935299 None:intergenic 25.0%
! TCATATAAAGAAAAGCTTGT+AGG - chr7_1:64935281-64935300 None:intergenic 25.0%
! CAAAGAACTAATTAGTATAG+AGG + chr7_1:64935346-64935365 Msa1030720:CDS 25.0%
! GATAATGATGCAATGAATAA+TGG + chr7_1:64935368-64935387 Msa1030720:CDS 25.0%
!!! ATAGAGAAGAGTTTTTGTTT+TGG + chr7_1:64935410-64935429 Msa1030720:CDS 25.0%
!!! TATTCTACATGTTCCTTTTT+TGG + chr7_1:64935632-64935651 Msa1030720:CDS 25.0%
! ATAGAATTTGACTAGATTCA+AGG + chr7_1:64935804-64935823 Msa1030720:intron 25.0%
!!! GTCAGATTTGGAAATTTTTT+TGG - chr7_1:64937640-64937659 None:intergenic 25.0%
! TCTGTATATAATTGTCAAAG+GGG - chr7_1:64937617-64937636 None:intergenic 25.0%
! AAAAAAAAATACCAGAAAGG+GGG - chr7_1:64937589-64937608 None:intergenic 25.0%
! ATGATTTCGTTAATGGAATT+TGG + chr7_1:64937044-64937063 Msa1030720:intron 25.0%
!!! TTATCTTTTTTTCTTCGTAC+AGG - chr7_1:64937199-64937218 None:intergenic 25.0%
! AAAGATAAATTATGTGCTAC+AGG + chr7_1:64937211-64937230 Msa1030720:intron 25.0%
! AAAAAAAAATACCAGAAAGG+GGG + chr7_1:64937589-64937608 Msa1030720:intron 25.0%
! TCTGTATATAATTGTCAAAG+GGG + chr7_1:64937617-64937636 Msa1030720:intron 25.0%
!!! GTCAGATTTGGAAATTTTTT+TGG + chr7_1:64937640-64937659 Msa1030720:intron 25.0%
! ACACAATACTATTACTGAAA+AGG - chr7_1:64937742-64937761 None:intergenic 25.0%
!!! AAACTGTTTTGAAGAACTTA+TGG - chr7_1:64938051-64938070 None:intergenic 25.0%
!!! AAGCTTGTTGATTCTTTAAT+GGG + chr7_1:64938201-64938220 Msa1030720:intron 25.0%
! AAACATTGAACTAGATTCAA+GGG - chr7_1:64938280-64938299 None:intergenic 25.0%
! TAAACATTGAACTAGATTCA+AGG - chr7_1:64938281-64938300 None:intergenic 25.0%
! ACTAAAACAGCATTACAATT+AGG + chr7_1:64938493-64938512 Msa1030720:CDS 25.0%
! TCTATTACATCAGAACTATT+TGG + chr7_1:64938565-64938584 Msa1030720:CDS 25.0%
! TAAAACTAGAAACAGAATAC+AGG + chr7_1:64938858-64938877 Msa1030720:CDS 25.0%
AGGAGATGTATTATATCTAG+GGG - chr7_1:64932290-64932309 None:intergenic 30.0%
TCAAGAGAGAAGAAGAAAAA+TGG + chr7_1:64932351-64932370 Msa1030720:exon 30.0%
! ACTCATGTATTTTCCTTTGT+GGG + chr7_1:64932564-64932583 Msa1030720:CDS 30.0%
! TTCTTGGTTATGGTTTTCAA+TGG + chr7_1:64932617-64932636 Msa1030720:CDS 30.0%
! CATTACTTTGCCTTATTATC+TGG + chr7_1:64932657-64932676 Msa1030720:CDS 30.0%
TGAAAACTGACCAGATAATA+AGG - chr7_1:64932670-64932689 None:intergenic 30.0%
ACCTAGTAGAAATGTAAAGA+GGG - chr7_1:64932712-64932731 None:intergenic 30.0%
AACCTAGTAGAAATGTAAAG+AGG - chr7_1:64932713-64932732 None:intergenic 30.0%
! TAGGTTGTTAATGCAAGTTT+TGG + chr7_1:64932727-64932746 Msa1030720:intron 30.0%
TCTCGCATTGAATAGAAATA+AGG - chr7_1:64932990-64933009 None:intergenic 30.0%
ATTTGATGCGCGAATATAAA+TGG + chr7_1:64933095-64933114 Msa1030720:intron 30.0%
TAGAGTCTCTTCATATTCAT+TGG - chr7_1:64933129-64933148 None:intergenic 30.0%
TACATTGAATAGAGATAAGG+TGG - chr7_1:64933244-64933263 None:intergenic 30.0%
AATCACACCACTTAACTAAT+TGG + chr7_1:64933305-64933324 Msa1030720:intron 30.0%
AGCTTTACCAATTAGTTAAG+TGG - chr7_1:64933315-64933334 None:intergenic 30.0%
!!! GAAACAGAGTATTTTGAAAC+AGG + chr7_1:64933356-64933375 Msa1030720:intron 30.0%
! AGAGCATCCACTTTATAAAA+TGG + chr7_1:64933420-64933439 Msa1030720:intron 30.0%
! CAATCCTCCATTTTATAAAG+TGG - chr7_1:64933430-64933449 None:intergenic 30.0%
! TTTGTAGAGTGATGAAGTTT+TGG + chr7_1:64933571-64933590 Msa1030720:intron 30.0%
TCCAAGACAAGTAACAATAA+GGG + chr7_1:64933600-64933619 Msa1030720:intron 30.0%
AACCAAAGACCTTAAAGTTA+AGG + chr7_1:64934221-64934240 Msa1030720:intron 30.0%
!! TTCCTTAACTTTAAGGTCTT+TGG - chr7_1:64934226-64934245 None:intergenic 30.0%
AGTTAAGGAAAATACTTGTG+TGG + chr7_1:64934236-64934255 Msa1030720:intron 30.0%
GTTGGTATGAACATTACAAT+AGG - chr7_1:64934596-64934615 None:intergenic 30.0%
!! ATAACTCAGTTGATTTTACC+CGG - chr7_1:64934631-64934650 None:intergenic 30.0%
!!! TTTTTTCTGTGCTTAATTGC+AGG + chr7_1:64934786-64934805 Msa1030720:CDS 30.0%
! TTTTTCTGTGCTTAATTGCA+GGG + chr7_1:64934787-64934806 Msa1030720:CDS 30.0%
TATGCATAATACATAGCAGA+CGG - chr7_1:64934835-64934854 None:intergenic 30.0%
TCAAAGATAATGCAAGTGAA+CGG - chr7_1:64934875-64934894 None:intergenic 30.0%
! TCTTTGAGTGTTAGTTTCAA+TGG + chr7_1:64934888-64934907 Msa1030720:CDS 30.0%
TGAGTACTAATAAGGAAATG+AGG - chr7_1:64935004-64935023 None:intergenic 30.0%
GTTGAGGCAAATGAAAATTA+AGG - chr7_1:64935096-64935115 None:intergenic 30.0%
TCTCTTGAATACACAATGTA+TGG - chr7_1:64935239-64935258 None:intergenic 30.0%
ACATTGTGTATTCAAGAGAA+TGG + chr7_1:64935240-64935259 Msa1030720:CDS 30.0%
!!! TTTTGGTAGTGTGTTAGAAA+AGG + chr7_1:64935427-64935446 Msa1030720:CDS 30.0%
!! TACATTGCATATTTTTGTGG+AGG + chr7_1:64935521-64935540 Msa1030720:CDS 30.0%
!! TATTTTTGTGGAGGAACAAT+TGG + chr7_1:64935530-64935549 Msa1030720:CDS 30.0%
TGCACAACTAGAAACAATTA+AGG + chr7_1:64935771-64935790 Msa1030720:intron 30.0%
AGATTCAAGGATAATTCTGT+TGG + chr7_1:64935817-64935836 Msa1030720:intron 30.0%
TTGGAAAATACTATGTGGTA+GGG + chr7_1:64935843-64935862 Msa1030720:intron 30.0%
!!! CATTTTGGTTTTGACTTTTG+AGG - chr7_1:64935918-64935937 None:intergenic 30.0%
AGATAAATATCACATGTACG+TGG + chr7_1:64935955-64935974 Msa1030720:intron 30.0%
!!! TGGAAATTTTTTTGGGAACA+GGG - chr7_1:64937648-64937667 None:intergenic 30.0%
!!! TTGGAAATTTTTTTGGGAAC+AGG - chr7_1:64937647-64937666 None:intergenic 30.0%
CTGTATATAATTGTCAAAGG+GGG - chr7_1:64937618-64937637 None:intergenic 30.0%
! TTTTATTCATTACCGCAGTT+TGG + chr7_1:64936228-64936247 Msa1030720:intron 30.0%
TTTATTCTCCTAATATGACC+AGG + chr7_1:64936286-64936305 Msa1030720:intron 30.0%
! TTTGAATGCTTTGTTGTAGA+TGG + chr7_1:64936483-64936502 Msa1030720:intron 30.0%
TAGTTTGATATTTGCGGAAA+GGG - chr7_1:64936839-64936858 None:intergenic 30.0%
ATAGTTTGATATTTGCGGAA+AGG - chr7_1:64936840-64936859 None:intergenic 30.0%
AACGAAGATGATTTCGTTAA+TGG + chr7_1:64937037-64937056 Msa1030720:intron 30.0%
TGATGCTGAAATTCAAAATG+AGG + chr7_1:64937114-64937133 Msa1030720:intron 30.0%
!! TAAATTTAGGTTGGCGTAAA+TGG + chr7_1:64937245-64937264 Msa1030720:intron 30.0%
AATAAAAACTACTTTCTCCG+CGG - chr7_1:64937274-64937293 None:intergenic 30.0%
! TTTTATTCATTACCGCAGTT+TGG - chr7_1:64936228-64936247 None:intergenic 30.0%
CTGTATATAATTGTCAAAGG+GGG + chr7_1:64937618-64937637 Msa1030720:intron 30.0%
!!! TTGGAAATTTTTTTGGGAAC+AGG + chr7_1:64937647-64937666 Msa1030720:intron 30.0%
!!! TGGAAATTTTTTTGGGAACA+GGG + chr7_1:64937648-64937667 Msa1030720:intron 30.0%
AATAGTATTGTGTTTCACCA+AGG + chr7_1:64937749-64937768 Msa1030720:intron 30.0%
GTAGTGATCAAATATGTACA+GGG - chr7_1:64937793-64937812 None:intergenic 30.0%
TGTAGTGATCAAATATGTAC+AGG - chr7_1:64937794-64937813 None:intergenic 30.0%
GTTCTTCAAAACAGTTTCAA+CGG + chr7_1:64938054-64938073 Msa1030720:intron 30.0%
!! ATTGGGTTGACAAAATTGTT+TGG - chr7_1:64938114-64938133 None:intergenic 30.0%
! CAATTTTGTCAACCCAATTA+AGG + chr7_1:64938116-64938135 Msa1030720:intron 30.0%
ATACTATTTCAAAGGACCTA+GGG - chr7_1:64938160-64938179 None:intergenic 30.0%
AATACTATTTCAAAGGACCT+AGG - chr7_1:64938161-64938180 None:intergenic 30.0%
!! CAAGCTTGTTGATTCTTTAA+TGG + chr7_1:64938200-64938219 Msa1030720:intron 30.0%
!! TGGATTAGTTATTGAGTAGA+TGG - chr7_1:64938365-64938384 None:intergenic 30.0%
ACTAATCCACTAATGTTGAA+TGG + chr7_1:64938376-64938395 Msa1030720:intron 30.0%
AGATATGGCTAGTAATATGA+AGG - chr7_1:64938470-64938489 None:intergenic 30.0%
TTCATATTACTAGCCATATC+TGG + chr7_1:64938469-64938488 Msa1030720:CDS 30.0%
AGCTTAATTGGATTAAGTTC+TGG + chr7_1:64938520-64938539 Msa1030720:CDS 30.0%
TTCTGATGTAATAGAAACTG+CGG - chr7_1:64938560-64938579 None:intergenic 30.0%
GCTATATGCAGACATTTATA+TGG + chr7_1:64938749-64938768 Msa1030720:CDS 30.0%
ATATGCAGACATTTATATGG+TGG + chr7_1:64938752-64938771 Msa1030720:CDS 30.0%
TTGCATTTCAATTGTTGGAT+TGG + chr7_1:64938777-64938796 Msa1030720:CDS 30.0%
AGATGTATTATATCTAGGGG+TGG - chr7_1:64932287-64932306 None:intergenic 35.0%
! TACATCTCCTATTTTCTTGG+TGG + chr7_1:64932300-64932319 Msa1030720:five_prime_UTR 35.0%
GAGAGAAGAAGAAAAATGGT+TGG + chr7_1:64932355-64932374 Msa1030720:exon 35.0%
! TGGTGCTAATAGCAACAATT+TGG + chr7_1:64932395-64932414 Msa1030720:CDS 35.0%
ATTTGGATACAAGCATTCAC+AGG + chr7_1:64932412-64932431 Msa1030720:CDS 35.0%
TTTGGATACAAGCATTCACA+GGG + chr7_1:64932413-64932432 Msa1030720:CDS 35.0%
TCTTTCAGTTGCATCAGATA+TGG + chr7_1:64932510-64932529 Msa1030720:CDS 35.0%
CTTTCAGTTGCATCAGATAT+GGG + chr7_1:64932511-64932530 Msa1030720:CDS 35.0%
!! TCAGATATGGGAAAAGCATT+TGG + chr7_1:64932523-64932542 Msa1030720:CDS 35.0%
!! ATATGGGAAAAGCATTTGGT+TGG + chr7_1:64932527-64932546 Msa1030720:CDS 35.0%
! CACTCATGTATTTTCCTTTG+TGG + chr7_1:64932563-64932582 Msa1030720:CDS 35.0%
TTTGATCATGTCTGCTTTCT+TGG + chr7_1:64932591-64932610 Msa1030720:CDS 35.0%
TTGATCATGTCTGCTTTCTT+GGG + chr7_1:64932592-64932611 Msa1030720:CDS 35.0%
TCCCTCTTTACATTTCTACT+AGG + chr7_1:64932708-64932727 Msa1030720:intron 35.0%
CTTAGCTCATGTTATGTTTG+TGG + chr7_1:64932770-64932789 Msa1030720:intron 35.0%
CTTTCTCATGTCAAACACTT+CGG + chr7_1:64933035-64933054 Msa1030720:intron 35.0%
TTTCTCATGTCAAACACTTC+GGG + chr7_1:64933036-64933055 Msa1030720:intron 35.0%
TTCGCGCATCAAATCTATAT+TGG - chr7_1:64933089-64933108 None:intergenic 35.0%
!! GGTCAACCCAAATTTTAAGA+TGG - chr7_1:64933155-64933174 None:intergenic 35.0%
!!! GTTTTGTAGGGTTTTAGTTG+TGG - chr7_1:64933176-64933195 None:intergenic 35.0%
!!! TCTTACGAGCTTGTTTTGTA+GGG - chr7_1:64933188-64933207 None:intergenic 35.0%
!!! ATCTTACGAGCTTGTTTTGT+AGG - chr7_1:64933189-64933208 None:intergenic 35.0%
TCTCTATTCAATGTAAGACC+TGG + chr7_1:64933249-64933268 Msa1030720:intron 35.0%
CTCTATTCAATGTAAGACCT+GGG + chr7_1:64933250-64933269 Msa1030720:intron 35.0%
! GTGGTGTGATTTTCCTAATT+AGG - chr7_1:64933296-64933315 None:intergenic 35.0%
GCATCCACTTTATAAAATGG+AGG + chr7_1:64933423-64933442 Msa1030720:intron 35.0%
CATAACTCATGACCATCAAA+CGG + chr7_1:64933477-64933496 Msa1030720:intron 35.0%
! CTTATTGTTACTTGTCTTGG+AGG - chr7_1:64933601-64933620 None:intergenic 35.0%
CTCCAAGACAAGTAACAATA+AGG + chr7_1:64933599-64933618 Msa1030720:intron 35.0%
! TCCCTTATTGTTACTTGTCT+TGG - chr7_1:64933604-64933623 None:intergenic 35.0%
AGTAACAATAAGGGAAGAAG+AGG + chr7_1:64933609-64933628 Msa1030720:intron 35.0%
TTGTTGTGGAGGATAAGAAT+TGG - chr7_1:64933674-64933693 None:intergenic 35.0%
TAAATTGGTCAATGTCATGG+TGG - chr7_1:64933701-64933720 None:intergenic 35.0%
ATGAAAACACATGTTAACCG+TGG + chr7_1:64933772-64933791 Msa1030720:intron 35.0%
TGAAAACACATGTTAACCGT+GGG + chr7_1:64933773-64933792 Msa1030720:intron 35.0%
TTGGTTGTGACCAAGAAATT+GGG - chr7_1:64934275-64934294 None:intergenic 35.0%
TTTGGTTGTGACCAAGAAAT+TGG - chr7_1:64934276-64934295 None:intergenic 35.0%
TTGGTCACAACCAAAGAAAT+GGG + chr7_1:64934281-64934300 Msa1030720:intron 35.0%
AAGAGAGAAGAGAGAGAAAA+TGG + chr7_1:64934317-64934336 Msa1030720:intron 35.0%
! ACTTTAGAGAAAGACTTGTG+TGG - chr7_1:64934413-64934432 None:intergenic 35.0%
!! TAACTCAGTTGATTTTACCC+GGG - chr7_1:64934630-64934649 None:intergenic 35.0%
ACTAATAAGGAAATGAGGAG+AGG - chr7_1:64934999-64935018 None:intergenic 35.0%
GATTGGAGTGAGTACTAATA+AGG - chr7_1:64935012-64935031 None:intergenic 35.0%
TAAAGAAAAGCTTGTAGGGA+GGG - chr7_1:64935276-64935295 None:intergenic 35.0%
ATAAAGAAAAGCTTGTAGGG+AGG - chr7_1:64935277-64935296 None:intergenic 35.0%
AAGGAGAAACTTACAATGCT+TGG + chr7_1:64935446-64935465 Msa1030720:CDS 35.0%
!! CAACTAAGATGTTGATTCGT+AGG + chr7_1:64935480-64935499 Msa1030720:CDS 35.0%
!! TAAGATGTTGATTCGTAGGT+GGG + chr7_1:64935484-64935503 Msa1030720:CDS 35.0%
GTCCAAGTGATTGAGAAATT+TGG - chr7_1:64935580-64935599 None:intergenic 35.0%
ATTTCTCAATCACTTGGACA+TGG + chr7_1:64935581-64935600 Msa1030720:CDS 35.0%
TATGCATTAGTGGTCTTTGT+AGG + chr7_1:64935692-64935711 Msa1030720:intron 35.0%
! AGGATAATTCTGTTGGTTGT+TGG + chr7_1:64935824-64935843 Msa1030720:intron 35.0%
GGTTGTTGGAAAATACTATG+TGG + chr7_1:64935838-64935857 Msa1030720:intron 35.0%
GTTGGAAAATACTATGTGGT+AGG + chr7_1:64935842-64935861 Msa1030720:intron 35.0%
! ATAGCCAGGATTTTCATAAG+AGG + chr7_1:64935891-64935910 Msa1030720:intron 35.0%
! TAGCCAGGATTTTCATAAGA+GGG + chr7_1:64935892-64935911 Msa1030720:intron 35.0%
! AATTTGAAACTGCGGTAATG+AGG - chr7_1:64937552-64937571 None:intergenic 35.0%
ATTACCGCAGTTTCAAATTG+CGG + chr7_1:64936131-64936150 Msa1030720:intron 35.0%
! ATTACCGCAATTTGAAACTG+CGG - chr7_1:64937544-64937563 None:intergenic 35.0%
!! TTTTGAACACGTCTGGAATT+AGG + chr7_1:64936521-64936540 Msa1030720:intron 35.0%
! TTTGAACACGTCTGGAATTA+GGG + chr7_1:64936522-64936541 Msa1030720:intron 35.0%
ATGAGAACAAGGTAAATGCA+AGG + chr7_1:64936585-64936604 Msa1030720:intron 35.0%
ATATTGCCAGAATGCACTTA+AGG - chr7_1:64936770-64936789 None:intergenic 35.0%
!!! GTTTCTAAAGCGTTTTGAGA+TGG - chr7_1:64936881-64936900 None:intergenic 35.0%
! TGAAAGAGGTGTATTGTGAT+TGG - chr7_1:64936916-64936935 None:intergenic 35.0%
! ATAGTGTACATTTTGTGGAG+GGG - chr7_1:64936948-64936967 None:intergenic 35.0%
! GATAGTGTACATTTTGTGGA+GGG - chr7_1:64936949-64936968 None:intergenic 35.0%
! TGAGGATAGTGTACATTTTG+TGG - chr7_1:64936953-64936972 None:intergenic 35.0%
AAACAAACTATGTACCCCAA+TGG + chr7_1:64936972-64936991 Msa1030720:intron 35.0%
AGACTTTCTATGGTAGTATG+TGG - chr7_1:64937004-64937023 None:intergenic 35.0%
ACATACTACCATAGAAAGTC+TGG + chr7_1:64937003-64937022 Msa1030720:intron 35.0%
TGCTGAAATTCAAAATGAGG+AGG + chr7_1:64937117-64937136 Msa1030720:intron 35.0%
TGAAATTCAAAATGAGGAGG+TGG + chr7_1:64937120-64937139 Msa1030720:intron 35.0%
! ATTACCGCAATTTGAAACTG+CGG + chr7_1:64937544-64937563 Msa1030720:intron 35.0%
ATTACCGCAGTTTCAAATTG+CGG - chr7_1:64936131-64936150 None:intergenic 35.0%
! AATTTGAAACTGCGGTAATG+AGG + chr7_1:64937552-64937571 Msa1030720:intron 35.0%
ATTTGATCACTACAGCATAC+CGG + chr7_1:64937800-64937819 Msa1030720:intron 35.0%
GCTTATGCTATAAGCACTTA+GGG - chr7_1:64937841-64937860 None:intergenic 35.0%
! TTTTGTCAACCCAATTAAGG+AGG + chr7_1:64938119-64938138 Msa1030720:intron 35.0%
CATTTGCCATTCAACATTAG+TGG - chr7_1:64938385-64938404 None:intergenic 35.0%
AAGATACACTTTGCAAGAAC+TGG + chr7_1:64938409-64938428 Msa1030720:CDS 35.0%
AATATGAAGGCAATTGGTGT+TGG - chr7_1:64938457-64938476 None:intergenic 35.0%
GCTAGTAATATGAAGGCAAT+TGG - chr7_1:64938463-64938482 None:intergenic 35.0%
CAATTAGGCACAAGCTTAAT+TGG + chr7_1:64938508-64938527 Msa1030720:CDS 35.0%
TGTTTGTGATGAGGATATTG+TGG - chr7_1:64938612-64938631 None:intergenic 35.0%
CTAAAGGAATGTTTGTGATG+AGG - chr7_1:64938621-64938640 None:intergenic 35.0%
CTCATCACAAACATTCCTTT+AGG + chr7_1:64938619-64938638 Msa1030720:CDS 35.0%
CATAAACTAATGCTGCAAGA+AGG - chr7_1:64938660-64938679 None:intergenic 35.0%
TATTGAATCTCTTCTGCTTG+TGG - chr7_1:64938692-64938711 None:intergenic 35.0%
CAAGCAGAAGAGATTCAATA+TGG + chr7_1:64938692-64938711 Msa1030720:CDS 35.0%
TGGAGTTGCATTTCAATTGT+TGG + chr7_1:64938772-64938791 Msa1030720:CDS 35.0%
!! CAAGCTTCTTGCTTTTCTTA+AGG + chr7_1:64938803-64938822 Msa1030720:CDS 35.0%
!! TCTCCTATTTTCTTGGTGGT+TGG + chr7_1:64932304-64932323 Msa1030720:five_prime_UTR 40.0%
CTTCCAACCACCAAGAAAAT+AGG - chr7_1:64932310-64932329 None:intergenic 40.0%
!! TTTTCTTGGTGGTTGGAAGA+AGG + chr7_1:64932311-64932330 Msa1030720:five_prime_UTR 40.0%
TGGTTGGAGAATCAAGAAAG+TGG + chr7_1:64932371-64932390 Msa1030720:CDS 40.0%
GGTTGGAGAATCAAGAAAGT+GGG + chr7_1:64932372-64932391 Msa1030720:CDS 40.0%
! AAAGCATTTGGTTGGTGTTC+TGG + chr7_1:64932535-64932554 Msa1030720:CDS 40.0%
! CATGTATTTTCCTTTGTGGG+TGG + chr7_1:64932567-64932586 Msa1030720:CDS 40.0%
ATGATCAAAACCACCCACAA+AGG - chr7_1:64932580-64932599 None:intergenic 40.0%
TGATCATGTCTGCTTTCTTG+GGG + chr7_1:64932593-64932612 Msa1030720:CDS 40.0%
TGATGCGCGAATATAAATGG+AGG + chr7_1:64933098-64933117 Msa1030720:intron 40.0%
ATGTCAAGAAGTGAAAACCC+AGG - chr7_1:64933270-64933289 None:intergenic 40.0%
! CGTTTGATGGTCATGAGTTA+TGG - chr7_1:64933479-64933498 None:intergenic 40.0%
TTGTGGAGGATAAGAATTGG+TGG - chr7_1:64933671-64933690 None:intergenic 40.0%
CTGTGACATCCGTAACATAA+TGG - chr7_1:64934086-64934105 None:intergenic 40.0%
ACGGATGTCACAGATGAATT+TGG + chr7_1:64934093-64934112 Msa1030720:intron 40.0%
TAAGGGATAGGAAAGGAAAG+AGG - chr7_1:64934137-64934156 None:intergenic 40.0%
GAAAATACTTGTGTGGACCA+GGG + chr7_1:64934243-64934262 Msa1030720:intron 40.0%
TGTGACCAAGAAATTGGGTT+TGG - chr7_1:64934270-64934289 None:intergenic 40.0%
CTTGGTCACAACCAAAGAAA+TGG + chr7_1:64934280-64934299 Msa1030720:intron 40.0%
TCTCTTCTCTCCCATTTCTT+TGG - chr7_1:64934294-64934313 None:intergenic 40.0%
CTTTAACCAAGAGACCACTT+GGG + chr7_1:64934445-64934464 Msa1030720:intron 40.0%
TACCAACTAAGCTATGTTCC+CGG + chr7_1:64934609-64934628 Msa1030720:intron 40.0%
ATGAGAGGGAATATAGGAAG+AGG - chr7_1:64935148-64935167 None:intergenic 40.0%
!! CTAAGATGTTGATTCGTAGG+TGG + chr7_1:64935483-64935502 Msa1030720:CDS 40.0%
! TGATTCGTAGGTGGGATTTT+TGG + chr7_1:64935492-64935511 Msa1030720:CDS 40.0%
TTGTGGAGGAACAATTGGAT+TGG + chr7_1:64935535-64935554 Msa1030720:CDS 40.0%
GGCCAAATTTCTCAATCACT+TGG + chr7_1:64935575-64935594 Msa1030720:CDS 40.0%
GCATACCTGCTGAATAAATC+AGG - chr7_1:64935677-64935696 None:intergenic 40.0%
ATTCAGCAGGTATGCATTAG+TGG + chr7_1:64935682-64935701 Msa1030720:intron 40.0%
!! ATCACTCATCCATTGACTCA+TGG + chr7_1:64935866-64935885 Msa1030720:intron 40.0%
!! TCACTCATCCATTGACTCAT+GGG + chr7_1:64935867-64935886 Msa1030720:intron 40.0%
! ATTACCGCAGTTTGGAATTG+CGG + chr7_1:64936236-64936255 Msa1030720:intron 40.0%
ATTACCGCAATTCCAAACTG+CGG - chr7_1:64937438-64937457 None:intergenic 40.0%
TACTCGCATTAGGACTGAAA+TGG - chr7_1:64936368-64936387 None:intergenic 40.0%
AGTCCTAATGCGAGTACTAT+TGG + chr7_1:64936372-64936391 Msa1030720:intron 40.0%
GTCCTAATGCGAGTACTATT+GGG + chr7_1:64936373-64936392 Msa1030720:intron 40.0%
GACATGCGAAGACTAAAGAA+AGG - chr7_1:64936403-64936422 None:intergenic 40.0%
! TTCTTTAGTCTTCGCATGTC+TGG + chr7_1:64936403-64936422 Msa1030720:intron 40.0%
GTCTGGATTATGACAAAGCT+CGG + chr7_1:64936420-64936439 Msa1030720:intron 40.0%
TCTGGATTATGACAAAGCTC+GGG + chr7_1:64936421-64936440 Msa1030720:intron 40.0%
TAGTCCAGGACAAGAGTTAT+TGG - chr7_1:64936462-64936481 None:intergenic 40.0%
! CAAAGCATTCAAAGTAGTCC+AGG - chr7_1:64936476-64936495 None:intergenic 40.0%
!! TTCTCGTTTTTGAACACGTC+TGG + chr7_1:64936514-64936533 Msa1030720:intron 40.0%
TTTCAAGGTTGACCTACAAG+CGG - chr7_1:64936638-64936657 None:intergenic 40.0%
TCAACCTTGAAAGTTCCCAT+TGG + chr7_1:64936646-64936665 Msa1030720:intron 40.0%
! CAGAGAAGGTATACATCTCT+CGG + chr7_1:64936701-64936720 Msa1030720:intron 40.0%
TGTCATCCTTAAGTGCATTC+TGG + chr7_1:64936761-64936780 Msa1030720:intron 40.0%
!! TTGTGATTGGTCTGGGTAAT+TGG - chr7_1:64936903-64936922 None:intergenic 40.0%
!! AGGTGTATTGTGATTGGTCT+GGG - chr7_1:64936910-64936929 None:intergenic 40.0%
! GGATAGTGTACATTTTGTGG+AGG - chr7_1:64936950-64936969 None:intergenic 40.0%
!! TGGGGTACATAGTTTGTTTG+AGG - chr7_1:64936971-64936990 None:intergenic 40.0%
AGTATGTGGTTGTGACCATT+GGG - chr7_1:64936990-64937009 None:intergenic 40.0%
TAGTATGTGGTTGTGACCAT+TGG - chr7_1:64936991-64937010 None:intergenic 40.0%
TGTTCCACATGTGCAAAATG+AGG + chr7_1:64937075-64937094 Msa1030720:intron 40.0%
TGTGCAAAATGAGGTGGATA+TGG + chr7_1:64937084-64937103 Msa1030720:intron 40.0%
! TTTTTCTTCGTACAGGTCGT+TGG - chr7_1:64937192-64937211 None:intergenic 40.0%
ATTACCGCAATTCCAAACTG+CGG + chr7_1:64937438-64937457 Msa1030720:intron 40.0%
! ATTACCGCAGTTTGGAATTG+CGG - chr7_1:64936236-64936255 None:intergenic 40.0%
! ACTTTCAAGTAAGAGGTCCT+TGG - chr7_1:64937769-64937788 None:intergenic 40.0%
! ACAGGGTACTTTCAAGTAAG+AGG - chr7_1:64937776-64937795 None:intergenic 40.0%
TATGCTATAAGCACTTAGGG+TGG - chr7_1:64937838-64937857 None:intergenic 40.0%
CGCTTATGCTATAAGCACTT+AGG - chr7_1:64937842-64937861 None:intergenic 40.0%
TTGTCATGGCCTCCTTAATT+GGG - chr7_1:64938131-64938150 None:intergenic 40.0%
ATTGTCATGGCCTCCTTAAT+TGG - chr7_1:64938132-64938151 None:intergenic 40.0%
! TTAATGGGTGAGTGACTAAG+TGG + chr7_1:64938216-64938235 Msa1030720:intron 40.0%
TACACTTTGCAAGAACTGGA+TGG + chr7_1:64938413-64938432 Msa1030720:CDS 40.0%
!!! TGCTGTTTTAGTGCCAGATA+TGG - chr7_1:64938485-64938504 None:intergenic 40.0%
TGATGTAATAGAAACTGCGG+CGG - chr7_1:64938557-64938576 None:intergenic 40.0%
CTATTTGGTCCAAACAGTGT+TGG + chr7_1:64938580-64938599 Msa1030720:CDS 40.0%
TGGTTCATACCAACACTGTT+TGG - chr7_1:64938592-64938611 None:intergenic 40.0%
CCATAGAGACATGAACCTAA+AGG - chr7_1:64938637-64938656 None:intergenic 40.0%
! CCTTTAGGTTCATGTCTCTA+TGG + chr7_1:64938634-64938653 Msa1030720:CDS 40.0%
ATAAAATCCGTCATGGGCAC+GGG - chr7_1:64932233-64932252 None:intergenic 45.0%
GATAAAATCCGTCATGGGCA+CGG - chr7_1:64932234-64932253 None:intergenic 45.0%
TGGAGAATCAAGAAAGTGGG+TGG + chr7_1:64932375-64932394 Msa1030720:CDS 45.0%
TTCTTGGGGCTTCTTGGTTA+TGG + chr7_1:64932607-64932626 Msa1030720:CDS 45.0%
!! ATGGTGGAGATTTGTTGTGG+AGG - chr7_1:64933685-64933704 None:intergenic 45.0%
!! GTCATGGTGGAGATTTGTTG+TGG - chr7_1:64933688-64933707 None:intergenic 45.0%
AAACACATGTTAACCGTGGG+TGG + chr7_1:64933776-64933795 Msa1030720:intron 45.0%
AACACATGTTAACCGTGGGT+GGG + chr7_1:64933777-64933796 Msa1030720:intron 45.0%
GTACACGTAAGGGATAGGAA+AGG - chr7_1:64934144-64934163 None:intergenic 45.0%
! AAGAGGTACACGTAAGGGAT+AGG - chr7_1:64934149-64934168 None:intergenic 45.0%
! TAGGCAAGAGGTACACGTAA+GGG - chr7_1:64934154-64934173 None:intergenic 45.0%
! TTAGGCAAGAGGTACACGTA+AGG - chr7_1:64934155-64934174 None:intergenic 45.0%
AGAGCTGGTTAGGATGAAGT+TGG - chr7_1:64934199-64934218 None:intergenic 45.0%
! CTTTGGTTCAAGAGCTGGTT+AGG - chr7_1:64934209-64934228 None:intergenic 45.0%
! AAGGTCTTTGGTTCAAGAGC+TGG - chr7_1:64934214-64934233 None:intergenic 45.0%
GGAAAATACTTGTGTGGACC+AGG + chr7_1:64934242-64934261 Msa1030720:intron 45.0%
! AAGAAATTGGGTTTGGTCCC+TGG - chr7_1:64934263-64934282 None:intergenic 45.0%
AGGGACCAAACCCAATTTCT+TGG + chr7_1:64934262-64934281 Msa1030720:intron 45.0%
TGTGACCAAACCCAATTGTG+TGG + chr7_1:64934380-64934399 Msa1030720:intron 45.0%
CCAAGTGGTCTCTTGGTTAA+AGG - chr7_1:64934447-64934466 None:intergenic 45.0%
CCTTTAACCAAGAGACCACT+TGG + chr7_1:64934444-64934463 Msa1030720:intron 45.0%
ACCAACTAAGCTATGTTCCC+GGG + chr7_1:64934610-64934629 Msa1030720:intron 45.0%
! GGCATTGAGCAAGAGATAGA+GGG - chr7_1:64934970-64934989 None:intergenic 45.0%
GGAAATGAGGAGAGGAACAA+GGG - chr7_1:64934991-64935010 None:intergenic 45.0%
AGGAAATGAGGAGAGGAACA+AGG - chr7_1:64934992-64935011 None:intergenic 45.0%
! ATTGCGACAATGAAGGGTGT+CGG - chr7_1:64935066-64935085 None:intergenic 45.0%
ATCGCGATTGCGACAATGAA+GGG - chr7_1:64935072-64935091 None:intergenic 45.0%
AATCGCGATTGCGACAATGA+AGG - chr7_1:64935073-64935092 None:intergenic 45.0%
TAACAAGGGCAAGGATGTTG+AGG - chr7_1:64935112-64935131 None:intergenic 45.0%
AACATCCTTGCCCTTGTTAC+AGG + chr7_1:64935113-64935132 Msa1030720:CDS 45.0%
GAGGTAGATGCCTGTAACAA+GGG - chr7_1:64935126-64935145 None:intergenic 45.0%
AGAGGGAATATAGGAAGAGG+AGG - chr7_1:64935145-64935164 None:intergenic 45.0%
ATAGCTCGTGCTATCCTTGT+CGG + chr7_1:64935179-64935198 Msa1030720:CDS 45.0%
!! GCAAGAACAAAAGCATTGCC+AGG - chr7_1:64935217-64935236 None:intergenic 45.0%
TGCAAGAAGGCGACCAAAAA+AGG - chr7_1:64935648-64935667 None:intergenic 45.0%
CTGCACCTGATTTATTCAGC+AGG + chr7_1:64935669-64935688 Msa1030720:CDS 45.0%
AGGCCCTCTTATGAAAATCC+TGG - chr7_1:64935898-64935917 None:intergenic 45.0%
TTGTCAAAGGGGGTCAGATT+TGG - chr7_1:64937628-64937647 None:intergenic 45.0%
TACAGAAATGACCCCCTTTC+TGG + chr7_1:64936079-64936098 Msa1030720:intron 45.0%
TAGGACTGAAATGGACGATG+AGG - chr7_1:64936359-64936378 None:intergenic 45.0%
GACCCAATAGTACTCGCATT+AGG - chr7_1:64936378-64936397 None:intergenic 45.0%
GCAGCTATGACATGAGAACA+AGG + chr7_1:64936574-64936593 Msa1030720:intron 45.0%
TTCAAGGTTGACCTACAAGC+GGG - chr7_1:64936637-64936656 None:intergenic 45.0%
AAGGCCAATGGGAACTTTCA+AGG - chr7_1:64936653-64936672 None:intergenic 45.0%
TCGTGAGACCATCAACTACA+GGG - chr7_1:64936680-64936699 None:intergenic 45.0%
TTCGTGAGACCATCAACTAC+AGG - chr7_1:64936681-64936700 None:intergenic 45.0%
CTGTTCGACATGATGTGTGT+TGG + chr7_1:64936729-64936748 Msa1030720:intron 45.0%
ATATTTGCGGAAAGGGCTCA+AGG - chr7_1:64936832-64936851 None:intergenic 45.0%
! GAGGTGTATTGTGATTGGTC+TGG - chr7_1:64936911-64936930 None:intergenic 45.0%
! TGTACATTTTGTGGAGGGGT+TGG - chr7_1:64936944-64936963 None:intergenic 45.0%
GTATGTGGTTGTGACCATTG+GGG - chr7_1:64936989-64937008 None:intergenic 45.0%
TCCACATGTGCAAAATGAGG+TGG + chr7_1:64937078-64937097 Msa1030720:intron 45.0%
! TCCACCTCATTTTGCACATG+TGG - chr7_1:64937082-64937101 None:intergenic 45.0%
TCAAAATGAGGAGGTGGATG+AGG + chr7_1:64937126-64937145 Msa1030720:intron 45.0%
TACAGAAATGACCCCCTTTC+TGG - chr7_1:64936079-64936098 None:intergenic 45.0%
TTGTCAAAGGGGGTCAGATT+TGG + chr7_1:64937628-64937647 Msa1030720:intron 45.0%
ACCTAGGGATGTCATTGTCA+TGG - chr7_1:64938145-64938164 None:intergenic 45.0%
!! GGCAATTGGTGTTGGTATCA+AGG - chr7_1:64938449-64938468 None:intergenic 45.0%
CGTGAGATGTCAATGTGCAT+GGG + chr7_1:64938718-64938737 Msa1030720:CDS 45.0%
AGATGTCAATGTGCATGGGA+AGG + chr7_1:64938722-64938741 Msa1030720:CDS 45.0%
!! ATATATATATATATATATTC+AGG + chr7_1:64932964-64932983 Msa1030720:intron 5.0%
!! CAAAAAAAAAAATTTAAATT+AGG - chr7_1:64934173-64934192 None:intergenic 5.0%
!!! ATTTAATCTAATTTTAAATT+AGG - chr7_1:64934480-64934499 None:intergenic 5.0%
TAAAATCCGTCATGGGCACG+GGG - chr7_1:64932232-64932251 None:intergenic 50.0%
CCGCGGATAAAATCCGTCAT+GGG - chr7_1:64932239-64932258 None:intergenic 50.0%
!!! CCCATGACGGATTTTATCCG+CGG + chr7_1:64932236-64932255 Msa1030720:five_prime_UTR 50.0%
!!! CCATGACGGATTTTATCCGC+GGG + chr7_1:64932237-64932256 Msa1030720:five_prime_UTR 50.0%
TCTGCTTTCTTGGGGCTTCT+TGG + chr7_1:64932601-64932620 Msa1030720:CDS 50.0%
GGAAGAAGAGGATCCAGTTC+TGG + chr7_1:64933621-64933640 Msa1030720:intron 50.0%
TTCTGGTGACCCACCATGAT+TGG + chr7_1:64933638-64933657 Msa1030720:intron 50.0%
CAGGACCACACAATTGGGTT+TGG - chr7_1:64934388-64934407 None:intergenic 50.0%
CAAACCCAATTGTGTGGTCC+TGG + chr7_1:64934386-64934405 Msa1030720:intron 50.0%
TGGACCAGGACCACACAATT+GGG - chr7_1:64934393-64934412 None:intergenic 50.0%
GAGAAAGACTTGTGTGGACC+AGG - chr7_1:64934407-64934426 None:intergenic 50.0%
ACCCGGGAACATAGCTTAGT+TGG - chr7_1:64934614-64934633 None:intergenic 50.0%
!! GGGCATTGAGCAAGAGATAG+AGG - chr7_1:64934971-64934990 None:intergenic 50.0%
!! GGCTGTGGTTGGTAAAGGAT+TGG - chr7_1:64935029-64935048 None:intergenic 50.0%
! AATTTTGCTGCGGCTGTGGT+TGG - chr7_1:64935040-64935059 None:intergenic 50.0%
!! GTGTCGGTGGAATTTTGCTG+CGG - chr7_1:64935050-64935069 None:intergenic 50.0%
AGATGCCTGTAACAAGGGCA+AGG - chr7_1:64935121-64935140 None:intergenic 50.0%
GGAGGTAGATGCCTGTAACA+AGG - chr7_1:64935127-64935146 None:intergenic 50.0%
GGGACGATGAGAGGGAATAT+AGG - chr7_1:64935154-64935173 None:intergenic 50.0%
TATGGTTGGGGACGATGAGA+GGG - chr7_1:64935162-64935181 None:intergenic 50.0%
GATAGCACGAGCTATGGTTG+GGG - chr7_1:64935174-64935193 None:intergenic 50.0%
GGATAGCACGAGCTATGGTT+GGG - chr7_1:64935175-64935194 None:intergenic 50.0%
AGGATAGCACGAGCTATGGT+TGG - chr7_1:64935176-64935195 None:intergenic 50.0%
GACAAGGATAGCACGAGCTA+TGG - chr7_1:64935180-64935199 None:intergenic 50.0%
AATCAGGTGCAGCTGCAAGA+AGG - chr7_1:64935661-64935680 None:intergenic 50.0%
TGGCTATGCCCATGAGTCAA+TGG - chr7_1:64935878-64935897 None:intergenic 50.0%
! ATTGACTCATGGGCATAGCC+AGG + chr7_1:64935877-64935896 Msa1030720:intron 50.0%
GTCGGCATCCTGGTCATATT+AGG - chr7_1:64936297-64936316 None:intergenic 50.0%
GACTGAAATGGACGATGAGG+TGG - chr7_1:64936356-64936375 None:intergenic 50.0%
AAAGCTCGGGACCTTCGTAT+GGG + chr7_1:64936434-64936453 Msa1030720:intron 50.0%
AGTTATTGGCCCCCATACGA+AGG - chr7_1:64936448-64936467 None:intergenic 50.0%
TCAAGGTTGACCTACAAGCG+GGG - chr7_1:64936636-64936655 None:intergenic 50.0%
GAGACCATCAACTACAGGGA+GGG - chr7_1:64936676-64936695 None:intergenic 50.0%
TGAGACCATCAACTACAGGG+AGG - chr7_1:64936677-64936696 None:intergenic 50.0%
GATGGTCTCACGAACAGAGA+AGG + chr7_1:64936687-64936706 Msa1030720:intron 50.0%
!! GTAGGTTCTGGAGACGTGTT+CGG - chr7_1:64936796-64936815 None:intergenic 50.0%
!! AGGGGTTGGTAGGTTGAAAG+AGG - chr7_1:64936930-64936949 None:intergenic 50.0%
!! CATTTTGTGGAGGGGTTGGT+AGG - chr7_1:64936940-64936959 None:intergenic 50.0%
ACCATAGAAAGTCTGGCTGC+AGG + chr7_1:64937010-64937029 Msa1030720:intron 50.0%
CCATAGAAAGTCTGGCTGCA+GGG + chr7_1:64937011-64937030 Msa1030720:intron 50.0%
TCTTGCTCTTCCTCTTCCTC+GGG - chr7_1:64937169-64937188 None:intergenic 50.0%
GTCTTGCTCTTCCTCTTCCT+CGG - chr7_1:64937170-64937189 None:intergenic 50.0%
GTTGGCGTAAATGGTTACCG+CGG + chr7_1:64937254-64937273 Msa1030720:intron 50.0%
TACAGCATACCGGCCTACTA+TGG + chr7_1:64937810-64937829 Msa1030720:intron 50.0%
ACTTAGGGTGGCACCATAGT+AGG - chr7_1:64937826-64937845 None:intergenic 50.0%
GCCATGACAATGACATCCCT+AGG + chr7_1:64938141-64938160 Msa1030720:intron 50.0%
GCGTGAGATGTCAATGTGCA+TGG + chr7_1:64938717-64938736 Msa1030720:CDS 50.0%
CCCGCGGATAAAATCCGTCA+TGG - chr7_1:64932240-64932259 None:intergenic 55.0%
! ATTTTATCCGCGGGTACCCG+CGG + chr7_1:64932246-64932265 Msa1030720:five_prime_UTR 55.0%
GCAAAAAAATCCGTGCCCGC+GGG - chr7_1:64932265-64932284 None:intergenic 55.0%
GGCAAAAAAATCCGTGCCCG+CGG - chr7_1:64932266-64932285 None:intergenic 55.0%
CGGGTGTGCGCGAATACAAA+TGG + chr7_1:64933055-64933074 Msa1030720:intron 55.0%
!! TCATGGTGGGTCACCAGAAC+TGG - chr7_1:64933637-64933656 None:intergenic 55.0%
GACCCACCATGATTGGTGAG+AGG + chr7_1:64933645-64933664 Msa1030720:intron 55.0%
GGCCTCTCACCAATCATGGT+GGG - chr7_1:64933650-64933669 None:intergenic 55.0%
TGGCCTCTCACCAATCATGG+TGG - chr7_1:64933651-64933670 None:intergenic 55.0%
TGGTGGCCTCTCACCAATCA+TGG - chr7_1:64933654-64933673 None:intergenic 55.0%
ATGTTAACCGTGGGTGGGAG+TGG + chr7_1:64933782-64933801 Msa1030720:intron 55.0%
TGTTAACCGTGGGTGGGAGT+GGG + chr7_1:64933783-64933802 Msa1030720:intron 55.0%
GTGGACCAGGACCACACAAT+TGG - chr7_1:64934394-64934413 None:intergenic 55.0%
TTGCAGGGTGTAGCATCTGC+TGG + chr7_1:64934802-64934821 Msa1030720:CDS 55.0%
! GTGGAATTTTGCTGCGGCTG+TGG - chr7_1:64935044-64935063 None:intergenic 55.0%
CTATGGTTGGGGACGATGAG+AGG - chr7_1:64935163-64935182 None:intergenic 55.0%
! GGAGAATAATCGCGCCGACA+AGG - chr7_1:64935196-64935215 None:intergenic 55.0%
TGTCGGCGCGATTATTCTCC+TGG + chr7_1:64935196-64935215 Msa1030720:CDS 55.0%
AGCCACCTTTCTGACACGCA+TGG + chr7_1:64936159-64936178 Msa1030720:intron 55.0%
TGCCATGCGTGTCAGAAAGG+TGG - chr7_1:64937518-64937537 None:intergenic 55.0%
ACCTTTCTGACACGCATGGC+AGG + chr7_1:64936163-64936182 Msa1030720:intron 55.0%
! CGAGACTGTGTGGGTTGTGT+CGG - chr7_1:64936315-64936334 None:intergenic 55.0%
CGACACAACCCACACAGTCT+CGG + chr7_1:64936313-64936332 Msa1030720:intron 55.0%
! AACCCACACAGTCTCGGTGT+CGG + chr7_1:64936319-64936338 Msa1030720:intron 55.0%
CAAAGCTCGGGACCTTCGTA+TGG + chr7_1:64936433-64936452 Msa1030720:intron 55.0%
AAGCTCGGGACCTTCGTATG+GGG + chr7_1:64936435-64936454 Msa1030720:intron 55.0%
GGGGCCAATAACTCTTGTCC+TGG + chr7_1:64936455-64936474 Msa1030720:intron 55.0%
AAGCGGGGTGGTGTGATTGT+GGG - chr7_1:64936621-64936640 None:intergenic 55.0%
AATCACACCACCCCGCTTGT+AGG + chr7_1:64936623-64936642 Msa1030720:intron 55.0%
TACAGGGAGGGAAGGCCAAT+GGG - chr7_1:64936664-64936683 None:intergenic 55.0%
CCATCAACTACAGGGAGGGA+AGG - chr7_1:64936672-64936691 None:intergenic 55.0%
CCTTCCCTCCCTGTAGTTGA+TGG + chr7_1:64936669-64936688 Msa1030720:intron 55.0%
GCGTTTGCAAGGGTAGGTTC+TGG - chr7_1:64936808-64936827 None:intergenic 55.0%
CAAGGTGCGTTTGCAAGGGT+AGG - chr7_1:64936814-64936833 None:intergenic 55.0%
GGCTCAAGGTGCGTTTGCAA+GGG - chr7_1:64936818-64936837 None:intergenic 55.0%
CCCTGCAGCCAGACTTTCTA+TGG - chr7_1:64937014-64937033 None:intergenic 55.0%
TGAGGAGGTGGATGAGGAAG+AGG + chr7_1:64937132-64937151 Msa1030720:intron 55.0%
GGTGGATGAGGAAGAGGAAG+AGG + chr7_1:64937138-64937157 Msa1030720:intron 55.0%
ACCTTTCTGACACGCATGGC+AGG - chr7_1:64936163-64936182 None:intergenic 55.0%
TGCCATGCGTGTCAGAAAGG+TGG + chr7_1:64937518-64937537 Msa1030720:intron 55.0%
AGCCACCTTTCTGACACGCA+TGG - chr7_1:64936159-64936178 None:intergenic 55.0%
! TTTTATCCGCGGGTACCCGC+GGG + chr7_1:64932247-64932266 Msa1030720:five_prime_UTR 60.0%
GTATCTCCCACTCCCACCCA+CGG - chr7_1:64933792-64933811 None:intergenic 60.0%
CCAAGAGACCACTTGGGAGC+CGG + chr7_1:64934451-64934470 Msa1030720:intron 60.0%
! TTAGGCAACCGGCTCCCAAG+TGG - chr7_1:64934462-64934481 None:intergenic 60.0%
!! GCTGCGGCTGTGGTTGGTAA+AGG - chr7_1:64935034-64935053 None:intergenic 60.0%
!! GCGACAATGAAGGGTGTCGG+TGG - chr7_1:64935063-64935082 None:intergenic 60.0%
GCCTGCCATGCGTGTCAGAA+AGG - chr7_1:64937515-64937534 None:intergenic 60.0%
TTCTGACACGCATGGCAGGC+TGG + chr7_1:64936167-64936186 Msa1030720:intron 60.0%
! TGTGGGTTGTGTCGGCATCC+TGG - chr7_1:64936307-64936326 None:intergenic 60.0%
CACCGACACCGAGACTGTGT+GGG - chr7_1:64936324-64936343 None:intergenic 60.0%
ACACCGACACCGAGACTGTG+TGG - chr7_1:64936325-64936344 None:intergenic 60.0%
AGCTCGGGACCTTCGTATGG+GGG + chr7_1:64936436-64936455 Msa1030720:intron 60.0%
CAAGCGGGGTGGTGTGATTG+TGG - chr7_1:64936622-64936641 None:intergenic 60.0%
AGGTTGACCTACAAGCGGGG+TGG - chr7_1:64936633-64936652 None:intergenic 60.0%
CTACAGGGAGGGAAGGCCAA+TGG - chr7_1:64936665-64936684 None:intergenic 60.0%
GGGCTCAAGGTGCGTTTGCA+AGG - chr7_1:64936819-64936838 None:intergenic 60.0%
AGAGGAAGAGGAAGAGCCCG+AGG + chr7_1:64937150-64937169 Msa1030720:intron 60.0%
AGAGGAAGAGCCCGAGGAAG+AGG + chr7_1:64937156-64937175 Msa1030720:intron 60.0%
TCTGACACGCATGGCAGGCT+CGG - chr7_1:64936168-64936187 None:intergenic 60.0%
GCCTGCCATGCGTGTCAGAA+AGG + chr7_1:64937515-64937534 Msa1030720:intron 60.0%
AGGGTGGCACCATAGTAGGC+CGG - chr7_1:64937822-64937841 None:intergenic 60.0%
AATCCGTCATGGGCACGGGG+CGG - chr7_1:64932229-64932248 None:intergenic 65.0%
CCGGCTCCCAAGTGGTCTCT+TGG - chr7_1:64934454-64934473 None:intergenic 65.0%
ACGCATGGCAGGCTGGCAGA+GGG + chr7_1:64936174-64936193 Msa1030720:intron 65.0%
TACCCGCCCCGTGCCCATGA+CGG + chr7_1:64932223-64932242 Msa1030720:five_prime_UTR 70.0%
ATCCGTCATGGGCACGGGGC+GGG - chr7_1:64932228-64932247 None:intergenic 70.0%
CACGCATGGCAGGCTGGCAG+AGG + chr7_1:64936173-64936192 Msa1030720:intron 70.0%
CGCATGGCAGGCTGGCAGAG+GGG + chr7_1:64936175-64936194 Msa1030720:intron 70.0%
GCATGGCAGGCTCGGCAGAG+GGG - chr7_1:64937506-64937525 None:intergenic 70.0%
CGCATGGCAGGCTCGGCAGA+GGG - chr7_1:64937507-64937526 None:intergenic 70.0%
ACGCATGGCAGGCTCGGCAG+AGG - chr7_1:64937508-64937527 None:intergenic 70.0%
GCAGGCTGGCAGAGGGGAGC+AGG + chr7_1:64936181-64936200 Msa1030720:intron 75.0%
CAGGCTCGGCAGAGGGGAGC+AGG - chr7_1:64937500-64937519 None:intergenic 75.0%
! TCCGCGGGTACCCGCGGGCA+CGG + chr7_1:64932252-64932271 Msa1030720:five_prime_UTR 80.0%
! TCCGTGCCCGCGGGTACCCG+CGG - chr7_1:64932256-64932275 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 64932218 64938909 64932218 ID=Msa1030720;Name=Msa1030720
chr7_1 mRNA 64932218 64938909 64932218 ID=Msa1030720-mRNA-1;Parent=Msa1030720;Name=Msa1030720-mRNA-1;_AED=0.03;_eAED=0.03;_QI=152|1|1|1|1|1|3|21|565
chr7_1 exon 64932218 64932678 64932218 ID=Msa1030720-mRNA-1:exon:14312;Parent=Msa1030720-mRNA-1
chr7_1 exon 64934783 64935690 64934783 ID=Msa1030720-mRNA-1:exon:14313;Parent=Msa1030720-mRNA-1
chr7_1 exon 64938408 64938909 64938408 ID=Msa1030720-mRNA-1:exon:14314;Parent=Msa1030720-mRNA-1
chr7_1 five_prime_UTR 64932218 64932369 64932218 ID=Msa1030720-mRNA-1:five_prime_utr;Parent=Msa1030720-mRNA-1
chr7_1 CDS 64932370 64932678 64932370 ID=Msa1030720-mRNA-1:cds;Parent=Msa1030720-mRNA-1
chr7_1 CDS 64934783 64935690 64934783 ID=Msa1030720-mRNA-1:cds;Parent=Msa1030720-mRNA-1
chr7_1 CDS 64938408 64938888 64938408 ID=Msa1030720-mRNA-1:cds;Parent=Msa1030720-mRNA-1
chr7_1 three_prime_UTR 64938889 64938909 64938889 ID=Msa1030720-mRNA-1:three_prime_utr;Parent=Msa1030720-mRNA-1
Gene Sequence

>Msa1030720

ATGGTTGGAGAATCAAGAAAGTGGGTGGTGCTAATAGCAACAATTTGGATACAAGCATTCACAGGGACAAACTTTGACTTCTCATCATATTCATCTGAGCTGAAATCAGTTCTTGATATAACTCAGCTTCAGCTGAATTCTCTTTCAGTTGCATCAGATATGGGAAAAGCATTTGGTTGGTGTTCTGGTGTCACACTCATGTATTTTCCTTTGTGGGTGGTTTTGATCATGTCTGCTTTCTTGGGGCTTCTTGGTTATGGTTTTCAATGGCTTGTCATTCAAAGACTCATTACTTTGCCTTATTATCTGGTATTTTTTCTGTGCTTAATTGCAGGGTGTAGCATCTGCTGGTTCAACACCGTCTGCTATGTATTATGCATAAAAAATTTCACAACTAACCGTTCACTTGCATTATCTTTGAGTGTTAGTTTCAATGGTGTAAGTGCAGCTTTATTTACTCTTATTGCCAATGCAATAAACTCAAACAATGACACCCTCTATCTCTTGCTCAATGCCCTTGTTCCTCTCCTCATTTCCTTATTAGTACTCACTCCAATCCTTTACCAACCACAGCCGCAGCAAAATTCCACCGACACCCTTCATTGTCGCAATCGCGATTCCTTAATTTTCATTTGCCTCAACATCCTTGCCCTTGTTACAGGCATCTACCTCCTCTTCCTATATTCCCTCTCATCGTCCCCAACCATAGCTCGTGCTATCCTTGTCGGCGCGATTATTCTCCTGGCAATGCTTTTGTTCTTGCCATACATTGTGTATTCAAGAGAATGGTCTTGTTTCACCCTCCCTACAAGCTTTTCTTTATATGAATCAAGTTTCACTCGTGTTGATCATAATGATGAACATGAGCTTCACAAAGAACTAATTAGTATAGAGGATAATGATGCAATGAATAATGGAAGTGTACAAAGCATGATGATAGAGAAGAGTTTTTGTTTTGGTAGTGTGTTAGAAAAGGAGAAACTTACAATGCTTGGTGAAGAGCATACAACTAAGATGTTGATTCGTAGGTGGGATTTTTGGCTATATTACATTGCATATTTTTGTGGAGGAACAATTGGATTGGTTTATAGTAATAACTTGGGCCAAATTTCTCAATCACTTGGACATGGTTCTCTGACAAGTTCTCTTGTTACACTTTATTCTACATGTTCCTTTTTTGGTCGCCTTCTTGCAGCTGCACCTGATTTATTCAGCAGCAAGATACACTTTGCAAGAACTGGATGGTTTGCAGCAGCCTTGATACCAACACCAATTGCCTTCATATTACTAGCCATATCTGGCACTAAAACAGCATTACAATTAGGCACAAGCTTAATTGGATTAAGTTCTGGCTTTGTATTTTCCGCCGCAGTTTCTATTACATCAGAACTATTTGGTCCAAACAGTGTTGGTATGAACCACAATATCCTCATCACAAACATTCCTTTAGGTTCATGTCTCTATGGCCTTCTTGCAGCATTAGTTTATGACTCAAATGCCACAAGCAGAAGAGATTCAATATGGCTGCGTGAGATGTCAATGTGCATGGGAAGGAAATGCTATATGCAGACATTTATATGGTGGAGTTGCATTTCAATTGTTGGATTGGTTTCAAGCTTCTTGCTTTTCTTAAGGACTAAGCAAGCTTATGACAGTTGTGAAAGAAATAAAACTAGAAACAGAATACAGGCAAGTTAG

Protein sequence

>Msa1030720

MVGESRKWVVLIATIWIQAFTGTNFDFSSYSSELKSVLDITQLQLNSLSVASDMGKAFGWCSGVTLMYFPLWVVLIMSAFLGLLGYGFQWLVIQRLITLPYYLVFFLCLIAGCSICWFNTVCYVLCIKNFTTNRSLALSLSVSFNGVSAALFTLIANAINSNNDTLYLLLNALVPLLISLLVLTPILYQPQPQQNSTDTLHCRNRDSLIFICLNILALVTGIYLLFLYSLSSSPTIARAILVGAIILLAMLLFLPYIVYSREWSCFTLPTSFSLYESSFTRVDHNDEHELHKELISIEDNDAMNNGSVQSMMIEKSFCFGSVLEKEKLTMLGEEHTTKMLIRRWDFWLYYIAYFCGGTIGLVYSNNLGQISQSLGHGSLTSSLVTLYSTCSFFGRLLAAAPDLFSSKIHFARTGWFAAALIPTPIAFILLAISGTKTALQLGTSLIGLSSGFVFSAAVSITSELFGPNSVGMNHNILITNIPLGSCLYGLLAALVYDSNATSRRDSIWLREMSMCMGRKCYMQTFIWWSCISIVGLVSSFLLFLRTKQAYDSCERNKTRNRIQAS*