Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1030720 | XP_003624468.1 | 96.637 | 565 | 19 | 0 | 1 | 565 | 1 | 565 | 0.0 | 1112 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1030720 | sp|F4I9E1|NFD4_ARATH | 53.405 | 558 | 234 | 8 | 1 | 557 | 37 | 569 | 0.0 | 547 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1030720 | G7KW86 | 96.637 | 565 | 19 | 0 | 1 | 565 | 1 | 565 | 0.0 | 1112 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0050930 | Msa1030720 | 0.804534 | 2.062415e-49 | -8.615850e-47 |
Msa0753720 | Msa1030720 | 0.801807 | 7.563751e-49 | -8.615850e-47 |
Msa1030720 | Msa1196960 | 0.826087 | 3.288479e-54 | -8.615850e-47 |
Msa0892080 | Msa1030720 | 0.839156 | 1.875674e-57 | -8.615850e-47 |
Msa0967580 | Msa1030720 | 0.837560 | 4.835930e-57 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1030720 | MtrunA17_Chr7g0251871 | 96.637 | 565 | 19 | 0 | 1 | 565 | 1 | 565 | 0.0 | 1112 |
Msa1030720 | MtrunA17_Chr5g0408921 | 59.825 | 570 | 211 | 6 | 1 | 557 | 1 | 565 | 0.0 | 648 |
Msa1030720 | MtrunA17_Chr8g0369621 | 58.537 | 574 | 222 | 3 | 1 | 562 | 42 | 611 | 0.0 | 627 |
Msa1030720 | MtrunA17_Chr3g0106801 | 38.113 | 551 | 293 | 13 | 7 | 552 | 7 | 514 | 2.30e-102 | 318 |
Msa1030720 | MtrunA17_Chr4g0037301 | 32.675 | 557 | 338 | 14 | 2 | 552 | 10 | 535 | 5.79e-82 | 266 |
Msa1030720 | MtrunA17_Chr5g0405621 | 33.510 | 567 | 328 | 16 | 5 | 563 | 11 | 536 | 1.25e-75 | 249 |
Msa1030720 | MtrunA17_Chr3g0106821 | 36.765 | 408 | 220 | 9 | 1 | 404 | 1 | 374 | 4.16e-72 | 235 |
Msa1030720 | MtrunA17_Chr2g0304561 | 29.663 | 563 | 365 | 11 | 3 | 551 | 8 | 553 | 1.67e-58 | 204 |
Msa1030720 | MtrunA17_Chr4g0064981 | 28.596 | 570 | 369 | 14 | 3 | 551 | 7 | 559 | 2.20e-54 | 193 |
Msa1030720 | MtrunA17_Chr7g0225191 | 25.044 | 571 | 396 | 11 | 7 | 552 | 15 | 578 | 2.36e-42 | 160 |
Msa1030720 | MtrunA17_Chr3g0132161 | 25.473 | 581 | 370 | 14 | 5 | 556 | 13 | 559 | 2.01e-41 | 157 |
Msa1030720 | MtrunA17_Chr7g0264861 | 26.598 | 579 | 381 | 16 | 7 | 565 | 29 | 583 | 4.00e-35 | 140 |
Msa1030720 | MtrunA17_Chr5g0442481 | 25.265 | 566 | 368 | 12 | 7 | 560 | 11 | 533 | 3.19e-33 | 133 |
Msa1030720 | MtrunA17_Chr1g0210274 | 25.483 | 569 | 387 | 13 | 7 | 563 | 26 | 569 | 9.22e-33 | 132 |
Msa1030720 | MtrunA17_Chr1g0174101 | 25.614 | 570 | 381 | 15 | 7 | 561 | 24 | 565 | 1.54e-32 | 132 |
Msa1030720 | MtrunA17_Chr1g0210291 | 25.350 | 572 | 379 | 16 | 7 | 561 | 25 | 565 | 6.19e-32 | 130 |
Msa1030720 | MtrunA17_Chr1g0210284 | 25.308 | 569 | 388 | 14 | 7 | 563 | 26 | 569 | 7.91e-32 | 130 |
Msa1030720 | MtrunA17_Chr2g0330551 | 24.061 | 586 | 369 | 17 | 5 | 563 | 5 | 541 | 1.65e-31 | 128 |
Msa1030720 | MtrunA17_Chr1g0171591 | 23.785 | 576 | 397 | 13 | 7 | 563 | 24 | 576 | 4.13e-31 | 127 |
Msa1030720 | MtrunA17_Chr3g0106831 | 38.636 | 132 | 71 | 2 | 420 | 551 | 1 | 122 | 2.72e-20 | 87.0 |
Msa1030720 | MtrunA17_Chr2g0333371 | 26.562 | 256 | 146 | 7 | 296 | 551 | 76 | 289 | 1.90e-16 | 80.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1030720 | AT5G45275.1 | 59.474 | 570 | 210 | 6 | 1 | 557 | 1 | 562 | 0.0 | 644 |
Msa1030720 | AT4G19450.1 | 58.579 | 577 | 222 | 5 | 1 | 565 | 1 | 572 | 0.0 | 623 |
Msa1030720 | AT1G31470.1 | 53.405 | 558 | 234 | 8 | 1 | 557 | 37 | 569 | 0.0 | 547 |
Msa1030720 | AT3G01630.1 | 50.266 | 563 | 235 | 12 | 6 | 557 | 22 | 550 | 6.02e-175 | 506 |
Msa1030720 | AT3G01630.2 | 50.266 | 563 | 235 | 12 | 6 | 557 | 40 | 568 | 6.51e-175 | 507 |
Msa1030720 | AT4G19450.2 | 57.971 | 414 | 158 | 4 | 1 | 402 | 1 | 410 | 3.56e-152 | 443 |
Msa1030720 | AT4G34950.1 | 33.509 | 570 | 340 | 16 | 7 | 561 | 16 | 561 | 1.95e-83 | 271 |
Msa1030720 | AT2G30300.1 | 33.813 | 556 | 297 | 16 | 5 | 550 | 2 | 496 | 5.16e-79 | 258 |
Msa1030720 | AT2G16660.1 | 32.969 | 549 | 330 | 15 | 7 | 550 | 14 | 529 | 1.14e-71 | 239 |
Msa1030720 | AT1G80530.1 | 28.998 | 569 | 353 | 17 | 3 | 552 | 9 | 545 | 1.27e-49 | 180 |
Msa1030720 | AT2G16660.2 | 32.828 | 396 | 236 | 11 | 7 | 399 | 14 | 382 | 8.17e-48 | 171 |
Msa1030720 | AT5G50630.1 | 27.717 | 552 | 354 | 13 | 7 | 550 | 16 | 530 | 1.01e-47 | 175 |
Msa1030720 | AT5G50520.1 | 27.717 | 552 | 354 | 13 | 7 | 550 | 16 | 530 | 1.01e-47 | 175 |
Msa1030720 | AT3G01930.2 | 26.065 | 587 | 387 | 15 | 5 | 560 | 14 | 584 | 1.62e-43 | 164 |
Msa1030720 | AT2G28120.1 | 26.049 | 572 | 383 | 14 | 7 | 565 | 17 | 561 | 5.63e-41 | 156 |
Msa1030720 | AT5G14120.1 | 25.433 | 578 | 395 | 13 | 5 | 559 | 14 | 578 | 9.55e-40 | 153 |
Msa1030720 | AT2G34355.1 | 27.018 | 570 | 341 | 16 | 7 | 556 | 7 | 521 | 7.57e-37 | 144 |
Msa1030720 | AT1G74780.1 | 26.298 | 578 | 352 | 14 | 7 | 561 | 7 | 533 | 2.83e-36 | 142 |
Msa1030720 | AT2G39210.1 | 23.363 | 565 | 404 | 13 | 7 | 561 | 21 | 566 | 8.46e-35 | 139 |
Msa1030720 | AT2G34350.1 | 27.273 | 572 | 325 | 20 | 7 | 550 | 7 | 515 | 8.04e-34 | 135 |
Msa1030720 | AT2G34350.2 | 27.273 | 572 | 325 | 20 | 7 | 550 | 7 | 515 | 8.04e-34 | 135 |
Msa1030720 | AT1G18940.1 | 25.528 | 568 | 338 | 15 | 7 | 550 | 9 | 515 | 3.52e-32 | 130 |
Msa1030720 | AT3G01930.3 | 25.060 | 419 | 273 | 10 | 5 | 396 | 14 | 418 | 2.05e-29 | 121 |
Msa1030720 | AT3G01930.1 | 24.473 | 474 | 312 | 14 | 117 | 560 | 14 | 471 | 3.56e-21 | 97.1 |
Msa1030720 | AT2G34355.2 | 30.876 | 217 | 136 | 6 | 345 | 556 | 164 | 371 | 1.80e-17 | 84.7 |
Find 123 sgRNAs with CRISPR-Local
Find 519 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTGATCATGTCTGCTTTCT+TGG | 0.152653 | 7_1:+64932591 | Msa1030720:CDS |
CAATTAGGCACAAGCTTAAT+TGG | 0.183879 | 7_1:+64938508 | Msa1030720:CDS |
TCTGCTTTCTTGGGGCTTCT+TGG | 0.215288 | 7_1:+64932601 | Msa1030720:CDS |
AACATCCTTGCCCTTGTTAC+AGG | 0.229614 | 7_1:+64935113 | Msa1030720:CDS |
GTCCAAGTGATTGAGAAATT+TGG | 0.236115 | 7_1:-64935577 | None:intergenic |
TCTATTACATCAGAACTATT+TGG | 0.242469 | 7_1:+64938565 | Msa1030720:CDS |
TTCTTGGGGCTTCTTGGTTA+TGG | 0.251188 | 7_1:+64932607 | Msa1030720:CDS |
CCTTTAGGTTCATGTCTCTA+TGG | 0.252107 | 7_1:+64938634 | Msa1030720:CDS |
CATTACTTTGCCTTATTATC+TGG | 0.258977 | 7_1:+64932657 | Msa1030720:CDS |
TTGATCATGTCTGCTTTCTT+GGG | 0.259108 | 7_1:+64932592 | Msa1030720:CDS |
AAAGCATTTGGTTGGTGTTC+TGG | 0.272670 | 7_1:+64932535 | Msa1030720:CDS |
TCTTTCAGTTGCATCAGATA+TGG | 0.286301 | 7_1:+64932510 | Msa1030720:CDS |
CTTCCAACCACCAAGAAAAT+AGG | 0.307063 | 7_1:-64932307 | None:intergenic |
GTTGAGGCAAATGAAAATTA+AGG | 0.335941 | 7_1:-64935093 | None:intergenic |
CTCATCACAAACATTCCTTT+AGG | 0.344275 | 7_1:+64938619 | Msa1030720:CDS |
ATAGGAGATGTATTATATCT+AGG | 0.344566 | 7_1:-64932289 | None:intergenic |
GATTGGAGTGAGTACTAATA+AGG | 0.354643 | 7_1:-64935009 | None:intergenic |
TTCATATTACTAGCCATATC+TGG | 0.355416 | 7_1:+64938469 | Msa1030720:CDS |
GCTATATGCAGACATTTATA+TGG | 0.357913 | 7_1:+64938749 | Msa1030720:CDS |
AGCTTAATTGGATTAAGTTC+TGG | 0.367596 | 7_1:+64938520 | Msa1030720:CDS |
GATAATGATGCAATGAATAA+TGG | 0.369939 | 7_1:+64935368 | Msa1030720:CDS |
TGAAAACTGACCAGATAATA+AGG | 0.370421 | 7_1:-64932667 | None:intergenic |
TGGTGCTAATAGCAACAATT+TGG | 0.381055 | 7_1:+64932395 | Msa1030720:CDS |
TCTTTGAGTGTTAGTTTCAA+TGG | 0.382694 | 7_1:+64934888 | Msa1030720:CDS |
TTGCATTTCAATTGTTGGAT+TGG | 0.386689 | 7_1:+64938777 | Msa1030720:CDS |
CTTTCAGTTGCATCAGATAT+GGG | 0.392568 | 7_1:+64932511 | Msa1030720:CDS |
GGGCATTGAGCAAGAGATAG+AGG | 0.396035 | 7_1:-64934968 | None:intergenic |
TCAGATATGGGAAAAGCATT+TGG | 0.415227 | 7_1:+64932523 | Msa1030720:CDS |
TGGTTCATACCAACACTGTT+TGG | 0.421752 | 7_1:-64938589 | None:intergenic |
TAGGAGATGTATTATATCTA+GGG | 0.425678 | 7_1:-64932288 | None:intergenic |
TGTCGGCGCGATTATTCTCC+TGG | 0.434180 | 7_1:+64935196 | Msa1030720:CDS |
GGGACGATGAGAGGGAATAT+AGG | 0.435845 | 7_1:-64935151 | None:intergenic |
GCATACCTGCTGAATAAATC+AGG | 0.436639 | 7_1:-64935674 | None:intergenic |
AAGATACACTTTGCAAGAAC+TGG | 0.438112 | 7_1:+64938409 | Msa1030720:CDS |
CAAGCAGAAGAGATTCAATA+TGG | 0.439295 | 7_1:+64938692 | Msa1030720:CDS |
ATCCGTCATGGGCACGGGGC+GGG | 0.440803 | 7_1:-64932225 | None:intergenic |
TGGAGTTGCATTTCAATTGT+TGG | 0.445337 | 7_1:+64938772 | Msa1030720:CDS |
GGATAGCACGAGCTATGGTT+GGG | 0.447034 | 7_1:-64935172 | None:intergenic |
TCTCTTGAATACACAATGTA+TGG | 0.447921 | 7_1:-64935236 | None:intergenic |
TCATATAAAGAAAAGCTTGT+AGG | 0.448857 | 7_1:-64935278 | None:intergenic |
GGCCAAATTTCTCAATCACT+TGG | 0.449862 | 7_1:+64935575 | Msa1030720:CDS |
CATATAAAGAAAAGCTTGTA+GGG | 0.451963 | 7_1:-64935277 | None:intergenic |
ATTGGTTTATAGTAATAACT+TGG | 0.455139 | 7_1:+64935553 | Msa1030720:CDS |
ACTAAAACAGCATTACAATT+AGG | 0.459971 | 7_1:+64938493 | Msa1030720:CDS |
GCTAGTAATATGAAGGCAAT+TGG | 0.460896 | 7_1:-64938460 | None:intergenic |
TCCGCGGGTACCCGCGGGCA+CGG | 0.464385 | 7_1:+64932252 | Msa1030720:five_prime_UTR |
ATAAAATCCGTCATGGGCAC+GGG | 0.471422 | 7_1:-64932230 | None:intergenic |
ATCGCGATTGCGACAATGAA+GGG | 0.472411 | 7_1:-64935069 | None:intergenic |
CAAAGAACTAATTAGTATAG+AGG | 0.473701 | 7_1:+64935346 | Msa1030720:CDS |
GATAAAATCCGTCATGGGCA+CGG | 0.480887 | 7_1:-64932231 | None:intergenic |
TGATCATGTCTGCTTTCTTG+GGG | 0.484019 | 7_1:+64932593 | Msa1030720:CDS |
TCCGTGCCCGCGGGTACCCG+CGG | 0.484274 | 7_1:-64932253 | None:intergenic |
TTGCAGGGTGTAGCATCTGC+TGG | 0.486473 | 7_1:+64934802 | Msa1030720:CDS |
AAGGAGAAACTTACAATGCT+TGG | 0.486978 | 7_1:+64935446 | Msa1030720:CDS |
ATAGCTCGTGCTATCCTTGT+CGG | 0.494834 | 7_1:+64935179 | Msa1030720:CDS |
GAGGTAGATGCCTGTAACAA+GGG | 0.495103 | 7_1:-64935123 | None:intergenic |
ATTGTTTGAGTTTATTGCAT+TGG | 0.499242 | 7_1:-64934940 | None:intergenic |
GCTGCGGCTGTGGTTGGTAA+AGG | 0.501986 | 7_1:-64935031 | None:intergenic |
TATTGAATCTCTTCTGCTTG+TGG | 0.505269 | 7_1:-64938689 | None:intergenic |
GGCAATTGGTGTTGGTATCA+AGG | 0.505973 | 7_1:-64938446 | None:intergenic |
AGGATAGCACGAGCTATGGT+TGG | 0.507744 | 7_1:-64935173 | None:intergenic |
AATCGCGATTGCGACAATGA+AGG | 0.508838 | 7_1:-64935070 | None:intergenic |
TGTTTGTGATGAGGATATTG+TGG | 0.514424 | 7_1:-64938609 | None:intergenic |
CAACTAAGATGTTGATTCGT+AGG | 0.514950 | 7_1:+64935480 | Msa1030720:CDS |
TAAGATGTTGATTCGTAGGT+GGG | 0.515127 | 7_1:+64935484 | Msa1030720:CDS |
ATTTGGATACAAGCATTCAC+AGG | 0.516938 | 7_1:+64932412 | Msa1030720:CDS |
TGAGTACTAATAAGGAAATG+AGG | 0.518574 | 7_1:-64935001 | None:intergenic |
CTGCACCTGATTTATTCAGC+AGG | 0.520045 | 7_1:+64935669 | Msa1030720:CDS |
TTGTGGAGGAACAATTGGAT+TGG | 0.525853 | 7_1:+64935535 | Msa1030720:CDS |
AGAGGGAATATAGGAAGAGG+AGG | 0.527050 | 7_1:-64935142 | None:intergenic |
TAAAACTAGAAACAGAATAC+AGG | 0.529981 | 7_1:+64938858 | Msa1030720:CDS |
ATGAGAGGGAATATAGGAAG+AGG | 0.530026 | 7_1:-64935145 | None:intergenic |
ACATTGTGTATTCAAGAGAA+TGG | 0.534568 | 7_1:+64935240 | Msa1030720:CDS |
GGAGAATAATCGCGCCGACA+AGG | 0.541352 | 7_1:-64935193 | None:intergenic |
TACCCGCCCCGTGCCCATGA+CGG | 0.541889 | 7_1:+64932223 | Msa1030720:five_prime_UTR |
TGGTTGGAGAATCAAGAAAG+TGG | 0.541955 | 7_1:+64932371 | Msa1030720:CDS |
CCATAGAGACATGAACCTAA+AGG | 0.546267 | 7_1:-64938634 | None:intergenic |
TTGGTTTATAGTAATAACTT+GGG | 0.550183 | 7_1:+64935554 | Msa1030720:CDS |
GCAAGAACAAAAGCATTGCC+AGG | 0.555374 | 7_1:-64935214 | None:intergenic |
TAAAGAAAAGCTTGTAGGGA+GGG | 0.563603 | 7_1:-64935273 | None:intergenic |
AGATATGGCTAGTAATATGA+AGG | 0.564480 | 7_1:-64938467 | None:intergenic |
CCCGCGGATAAAATCCGTCA+TGG | 0.565072 | 7_1:-64932237 | None:intergenic |
GACAAGGATAGCACGAGCTA+TGG | 0.566041 | 7_1:-64935177 | None:intergenic |
GGAGGTAGATGCCTGTAACA+AGG | 0.569196 | 7_1:-64935124 | None:intergenic |
ATATGGGAAAAGCATTTGGT+TGG | 0.569888 | 7_1:+64932527 | Msa1030720:CDS |
GCGTGAGATGTCAATGTGCA+TGG | 0.571775 | 7_1:+64938717 | Msa1030720:CDS |
CTATGGTTGGGGACGATGAG+AGG | 0.572101 | 7_1:-64935160 | None:intergenic |
AATATGAAGGCAATTGGTGT+TGG | 0.576887 | 7_1:-64938454 | None:intergenic |
TAAAATCCGTCATGGGCACG+GGG | 0.587392 | 7_1:-64932229 | None:intergenic |
GGCTGTGGTTGGTAAAGGAT+TGG | 0.587777 | 7_1:-64935026 | None:intergenic |
CTATTTGGTCCAAACAGTGT+TGG | 0.591863 | 7_1:+64938580 | Msa1030720:CDS |
TATGCATAATACATAGCAGA+CGG | 0.594003 | 7_1:-64934832 | None:intergenic |
TAACAAGGGCAAGGATGTTG+AGG | 0.594679 | 7_1:-64935109 | None:intergenic |
ATTTCTCAATCACTTGGACA+TGG | 0.596596 | 7_1:+64935581 | Msa1030720:CDS |
AATCAGGTGCAGCTGCAAGA+AGG | 0.596861 | 7_1:-64935658 | None:intergenic |
CATAAACTAATGCTGCAAGA+AGG | 0.600173 | 7_1:-64938657 | None:intergenic |
GGTTGGAGAATCAAGAAAGT+GGG | 0.601920 | 7_1:+64932372 | Msa1030720:CDS |
AATCCGTCATGGGCACGGGG+CGG | 0.602128 | 7_1:-64932226 | None:intergenic |
CTAAAGGAATGTTTGTGATG+AGG | 0.602675 | 7_1:-64938618 | None:intergenic |
TATGGTTGGGGACGATGAGA+GGG | 0.603565 | 7_1:-64935159 | None:intergenic |
CTAAGATGTTGATTCGTAGG+TGG | 0.604667 | 7_1:+64935483 | Msa1030720:CDS |
AGGAAATGAGGAGAGGAACA+AGG | 0.605408 | 7_1:-64934989 | None:intergenic |
TACACTTTGCAAGAACTGGA+TGG | 0.607991 | 7_1:+64938413 | Msa1030720:CDS |
GGCATTGAGCAAGAGATAGA+GGG | 0.611736 | 7_1:-64934967 | None:intergenic |
AGATGCCTGTAACAAGGGCA+AGG | 0.615965 | 7_1:-64935118 | None:intergenic |
CCGCGGATAAAATCCGTCAT+GGG | 0.623567 | 7_1:-64932236 | None:intergenic |
ATGATCAAAACCACCCACAA+AGG | 0.629769 | 7_1:-64932577 | None:intergenic |
GCGACAATGAAGGGTGTCGG+TGG | 0.631200 | 7_1:-64935060 | None:intergenic |
ATATGCAGACATTTATATGG+TGG | 0.633501 | 7_1:+64938752 | Msa1030720:CDS |
ATTGCGACAATGAAGGGTGT+CGG | 0.634367 | 7_1:-64935063 | None:intergenic |
CGTGAGATGTCAATGTGCAT+GGG | 0.634470 | 7_1:+64938718 | Msa1030720:CDS |
GATAGCACGAGCTATGGTTG+GGG | 0.635987 | 7_1:-64935171 | None:intergenic |
ATAAAGAAAAGCTTGTAGGG+AGG | 0.638767 | 7_1:-64935274 | None:intergenic |
ACTAATAAGGAAATGAGGAG+AGG | 0.640029 | 7_1:-64934996 | None:intergenic |
TTCTGATGTAATAGAAACTG+CGG | 0.652391 | 7_1:-64938557 | None:intergenic |
GGAAATGAGGAGAGGAACAA+GGG | 0.653958 | 7_1:-64934988 | None:intergenic |
AGATGTATTATATCTAGGGG+TGG | 0.656925 | 7_1:-64932284 | None:intergenic |
TCAAAGATAATGCAAGTGAA+CGG | 0.657636 | 7_1:-64934872 | None:intergenic |
TTTGGATACAAGCATTCACA+GGG | 0.664994 | 7_1:+64932413 | Msa1030720:CDS |
AGGAGATGTATTATATCTAG+GGG | 0.667410 | 7_1:-64932287 | None:intergenic |
AGATGTCAATGTGCATGGGA+AGG | 0.679584 | 7_1:+64938722 | Msa1030720:CDS |
TGATGTAATAGAAACTGCGG+CGG | 0.687415 | 7_1:-64938554 | None:intergenic |
TGGAGAATCAAGAAAGTGGG+TGG | 0.726199 | 7_1:+64932375 | Msa1030720:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAATAATTGTCTATTTAAAT+TGG | - | chr7_1:64933716-64933735 | None:intergenic | 10.0% |
!! | TAAAATTAGATTAAATGATT+TGG | + | chr7_1:64934484-64934503 | Msa1030720:intron | 10.0% |
!! | AAAATTAGATTAAATGATTT+GGG | + | chr7_1:64934485-64934504 | Msa1030720:intron | 10.0% |
!!! | TATTTAATTTTCAAAGGTTA+AGG | + | chr7_1:64933380-64933399 | Msa1030720:intron | 15.0% |
!!! | AAATTAAATACGAATTTTGT+TGG | + | chr7_1:64933508-64933527 | Msa1030720:intron | 15.0% |
!!! | AATTAAATACGAATTTTGTT+GGG | + | chr7_1:64933509-64933528 | Msa1030720:intron | 15.0% |
!! | TACTTATATATTACTTAAAG+AGG | - | chr7_1:64933538-64933557 | None:intergenic | 15.0% |
!!! | TTTCAATGATTTTTTTTTAG+AGG | - | chr7_1:64933922-64933941 | None:intergenic | 15.0% |
!! | AAAACTTAAATGACTTATAT+AGG | - | chr7_1:64934006-64934025 | None:intergenic | 15.0% |
!!! | CATGTAATTATACTTTTTTT+AGG | - | chr7_1:64935742-64935761 | None:intergenic | 15.0% |
!!! | CTAAAAAAAGTATAATTACA+TGG | + | chr7_1:64935740-64935759 | Msa1030720:intron | 15.0% |
!! | TAAAAAAAAAATACCAGAAA+GGG | - | chr7_1:64937587-64937606 | None:intergenic | 15.0% |
!! | ATAAAAAAAAAATACCAGAA+AGG | - | chr7_1:64937586-64937605 | None:intergenic | 15.0% |
!! | ATAAAAAAAAAATACCAGAA+AGG | + | chr7_1:64937586-64937605 | Msa1030720:intron | 15.0% |
!! | TAAAAAAAAAATACCAGAAA+GGG | + | chr7_1:64937587-64937606 | Msa1030720:intron | 15.0% |
!! | TATTAAGATTAAGAAAATGA+TGG | + | chr7_1:64937707-64937726 | Msa1030720:intron | 15.0% |
!! | CTTAATCTAAAAAAAAGAAA+CGG | - | chr7_1:64937926-64937945 | None:intergenic | 15.0% |
!! | TTAATGAAATAAGATGAAAA+TGG | + | chr7_1:64938000-64938019 | Msa1030720:intron | 15.0% |
!! | TTATGAAAATACTATTTCAA+AGG | - | chr7_1:64938168-64938187 | None:intergenic | 15.0% |
!!! | TATTTTCATAACTAAATGAA+TGG | + | chr7_1:64938177-64938196 | Msa1030720:intron | 15.0% |
!! | TCTAATACCATCTTAAAATT+TGG | + | chr7_1:64933145-64933164 | Msa1030720:intron | 20.0% |
!! | CTAATACCATCTTAAAATTT+GGG | + | chr7_1:64933146-64933165 | Msa1030720:intron | 20.0% |
!!! | GTTTGAAATGAGTTTATAAA+GGG | - | chr7_1:64933222-64933241 | None:intergenic | 20.0% |
!!! | AAAATACTCTGTTTCTAATA+TGG | - | chr7_1:64933351-64933370 | None:intergenic | 20.0% |
!!! | ATTAAATACGAATTTTGTTG+GGG | + | chr7_1:64933510-64933529 | Msa1030720:intron | 20.0% |
!!! | AAGAAATCAAATCTTTCTTT+TGG | - | chr7_1:64933822-64933841 | None:intergenic | 20.0% |
!! | AATAAACAAAATGTGTGAAA+AGG | - | chr7_1:64934042-64934061 | None:intergenic | 20.0% |
!! | AAAAATTTAAATTAGGCAAG+AGG | - | chr7_1:64934166-64934185 | None:intergenic | 20.0% |
!!! | AAGTATTTTCCTTAACTTTA+AGG | - | chr7_1:64934233-64934252 | None:intergenic | 20.0% |
!! | TCTCATTTATTTACCTTAAA+CGG | - | chr7_1:64934546-64934565 | None:intergenic | 20.0% |
!!! | TATTACATTGCATATTTTTG+TGG | + | chr7_1:64935518-64935537 | Msa1030720:CDS | 20.0% |
!!! | ATTGGTTTATAGTAATAACT+TGG | + | chr7_1:64935553-64935572 | Msa1030720:CDS | 20.0% |
!! | TTGGTTTATAGTAATAACTT+GGG | + | chr7_1:64935554-64935573 | Msa1030720:CDS | 20.0% |
!!! | TTCTTTAGTCATATACATTT+TGG | - | chr7_1:64935933-64935952 | None:intergenic | 20.0% |
!!! | TCAGATTTGGAAATTTTTTT+GGG | - | chr7_1:64937641-64937660 | None:intergenic | 20.0% |
!! | TTCTGTATATAATTGTCAAA+GGG | - | chr7_1:64937616-64937635 | None:intergenic | 20.0% |
!! | TTTCTGTATATAATTGTCAA+AGG | - | chr7_1:64937615-64937634 | None:intergenic | 20.0% |
!! | AAAAAAAAAATACCAGAAAG+GGG | - | chr7_1:64937588-64937607 | None:intergenic | 20.0% |
!! | AAAGAATAGTTTGATATTTG+CGG | - | chr7_1:64936845-64936864 | None:intergenic | 20.0% |
!! | GGAAGTCATAATTTAAATTT+AGG | + | chr7_1:64937232-64937251 | Msa1030720:intron | 20.0% |
!! | GTCATAATTTAAATTTAGGT+TGG | + | chr7_1:64937236-64937255 | Msa1030720:intron | 20.0% |
!! | AAAAAAAAAATACCAGAAAG+GGG | + | chr7_1:64937588-64937607 | Msa1030720:intron | 20.0% |
!! | TTTCTGTATATAATTGTCAA+AGG | + | chr7_1:64937615-64937634 | Msa1030720:intron | 20.0% |
!! | TTCTGTATATAATTGTCAAA+GGG | + | chr7_1:64937616-64937635 | Msa1030720:intron | 20.0% |
!!! | TCAGATTTGGAAATTTTTTT+GGG | + | chr7_1:64937641-64937660 | Msa1030720:intron | 20.0% |
! | TAGGAGATGTATTATATCTA+GGG | - | chr7_1:64932291-64932310 | None:intergenic | 25.0% |
! | ATAGGAGATGTATTATATCT+AGG | - | chr7_1:64932292-64932311 | None:intergenic | 25.0% |
!! | TAATACATCTCCTATTTTCT+TGG | + | chr7_1:64932297-64932316 | Msa1030720:five_prime_UTR | 25.0% |
!! | GTTGACTATGTTATGAATTT+TGG | + | chr7_1:64932803-64932822 | Msa1030720:intron | 25.0% |
!! | AACTAGCAACAAGTAATTTT+TGG | + | chr7_1:64932827-64932846 | Msa1030720:intron | 25.0% |
! | AATTATGACTAGATTAGATG+AGG | + | chr7_1:64932899-64932918 | Msa1030720:intron | 25.0% |
!! | GGTTTGAAATGAGTTTATAA+AGG | - | chr7_1:64933223-64933242 | None:intergenic | 25.0% |
! | TCTTACATTGAATAGAGATA+AGG | - | chr7_1:64933247-64933266 | None:intergenic | 25.0% |
! | TTCTTGACATATACCTAATT+AGG | + | chr7_1:64933280-64933299 | Msa1030720:intron | 25.0% |
!!! | AAACAGAGTATTTTGAAACA+GGG | + | chr7_1:64933357-64933376 | Msa1030720:intron | 25.0% |
!!! | ACAGGGTATTTAATTTTCAA+AGG | + | chr7_1:64933374-64933393 | Msa1030720:intron | 25.0% |
! | GGCATATTATGTGTATTATT+TGG | - | chr7_1:64933458-64933477 | None:intergenic | 25.0% |
!!! | ATTTTTTAGAATCCGTTTGA+TGG | - | chr7_1:64933492-64933511 | None:intergenic | 25.0% |
! | ATTTAAATTGGTCAATGTCA+TGG | - | chr7_1:64933704-64933723 | None:intergenic | 25.0% |
!! | AGATTATCATACGTTAGTTT+AGG | - | chr7_1:64933861-64933880 | None:intergenic | 25.0% |
!! | CACAATTTTCCATTATGTTA+CGG | + | chr7_1:64934074-64934093 | Msa1030720:intron | 25.0% |
!! | CTAATTTTAAATTAGGCAAC+CGG | - | chr7_1:64934473-64934492 | None:intergenic | 25.0% |
!! | AGTCAAAATTTTACCGTTTA+AGG | + | chr7_1:64934530-64934549 | Msa1030720:intron | 25.0% |
! | ATTACAATAGGTAAAGATTG+GGG | - | chr7_1:64934584-64934603 | None:intergenic | 25.0% |
! | CATTACAATAGGTAAAGATT+GGG | - | chr7_1:64934585-64934604 | None:intergenic | 25.0% |
! | ACATTACAATAGGTAAAGAT+TGG | - | chr7_1:64934586-64934605 | None:intergenic | 25.0% |
!! | TACATGCTCATAAATCTTTT+AGG | + | chr7_1:64934702-64934721 | Msa1030720:intron | 25.0% |
! | ATATTCTTGTATTATACTGC+AGG | + | chr7_1:64934761-64934780 | Msa1030720:intron | 25.0% |
!! | ATTGTTTGAGTTTATTGCAT+TGG | - | chr7_1:64934943-64934962 | None:intergenic | 25.0% |
! | CATATAAAGAAAAGCTTGTA+GGG | - | chr7_1:64935280-64935299 | None:intergenic | 25.0% |
! | TCATATAAAGAAAAGCTTGT+AGG | - | chr7_1:64935281-64935300 | None:intergenic | 25.0% |
! | CAAAGAACTAATTAGTATAG+AGG | + | chr7_1:64935346-64935365 | Msa1030720:CDS | 25.0% |
! | GATAATGATGCAATGAATAA+TGG | + | chr7_1:64935368-64935387 | Msa1030720:CDS | 25.0% |
!!! | ATAGAGAAGAGTTTTTGTTT+TGG | + | chr7_1:64935410-64935429 | Msa1030720:CDS | 25.0% |
!!! | TATTCTACATGTTCCTTTTT+TGG | + | chr7_1:64935632-64935651 | Msa1030720:CDS | 25.0% |
! | ATAGAATTTGACTAGATTCA+AGG | + | chr7_1:64935804-64935823 | Msa1030720:intron | 25.0% |
!!! | GTCAGATTTGGAAATTTTTT+TGG | - | chr7_1:64937640-64937659 | None:intergenic | 25.0% |
! | TCTGTATATAATTGTCAAAG+GGG | - | chr7_1:64937617-64937636 | None:intergenic | 25.0% |
! | AAAAAAAAATACCAGAAAGG+GGG | - | chr7_1:64937589-64937608 | None:intergenic | 25.0% |
! | ATGATTTCGTTAATGGAATT+TGG | + | chr7_1:64937044-64937063 | Msa1030720:intron | 25.0% |
!!! | TTATCTTTTTTTCTTCGTAC+AGG | - | chr7_1:64937199-64937218 | None:intergenic | 25.0% |
! | AAAGATAAATTATGTGCTAC+AGG | + | chr7_1:64937211-64937230 | Msa1030720:intron | 25.0% |
! | AAAAAAAAATACCAGAAAGG+GGG | + | chr7_1:64937589-64937608 | Msa1030720:intron | 25.0% |
! | TCTGTATATAATTGTCAAAG+GGG | + | chr7_1:64937617-64937636 | Msa1030720:intron | 25.0% |
!!! | GTCAGATTTGGAAATTTTTT+TGG | + | chr7_1:64937640-64937659 | Msa1030720:intron | 25.0% |
! | ACACAATACTATTACTGAAA+AGG | - | chr7_1:64937742-64937761 | None:intergenic | 25.0% |
!!! | AAACTGTTTTGAAGAACTTA+TGG | - | chr7_1:64938051-64938070 | None:intergenic | 25.0% |
!!! | AAGCTTGTTGATTCTTTAAT+GGG | + | chr7_1:64938201-64938220 | Msa1030720:intron | 25.0% |
! | AAACATTGAACTAGATTCAA+GGG | - | chr7_1:64938280-64938299 | None:intergenic | 25.0% |
! | TAAACATTGAACTAGATTCA+AGG | - | chr7_1:64938281-64938300 | None:intergenic | 25.0% |
! | ACTAAAACAGCATTACAATT+AGG | + | chr7_1:64938493-64938512 | Msa1030720:CDS | 25.0% |
! | TCTATTACATCAGAACTATT+TGG | + | chr7_1:64938565-64938584 | Msa1030720:CDS | 25.0% |
! | TAAAACTAGAAACAGAATAC+AGG | + | chr7_1:64938858-64938877 | Msa1030720:CDS | 25.0% |
AGGAGATGTATTATATCTAG+GGG | - | chr7_1:64932290-64932309 | None:intergenic | 30.0% | |
TCAAGAGAGAAGAAGAAAAA+TGG | + | chr7_1:64932351-64932370 | Msa1030720:exon | 30.0% | |
! | ACTCATGTATTTTCCTTTGT+GGG | + | chr7_1:64932564-64932583 | Msa1030720:CDS | 30.0% |
! | TTCTTGGTTATGGTTTTCAA+TGG | + | chr7_1:64932617-64932636 | Msa1030720:CDS | 30.0% |
! | CATTACTTTGCCTTATTATC+TGG | + | chr7_1:64932657-64932676 | Msa1030720:CDS | 30.0% |
TGAAAACTGACCAGATAATA+AGG | - | chr7_1:64932670-64932689 | None:intergenic | 30.0% | |
ACCTAGTAGAAATGTAAAGA+GGG | - | chr7_1:64932712-64932731 | None:intergenic | 30.0% | |
AACCTAGTAGAAATGTAAAG+AGG | - | chr7_1:64932713-64932732 | None:intergenic | 30.0% | |
! | TAGGTTGTTAATGCAAGTTT+TGG | + | chr7_1:64932727-64932746 | Msa1030720:intron | 30.0% |
TCTCGCATTGAATAGAAATA+AGG | - | chr7_1:64932990-64933009 | None:intergenic | 30.0% | |
ATTTGATGCGCGAATATAAA+TGG | + | chr7_1:64933095-64933114 | Msa1030720:intron | 30.0% | |
TAGAGTCTCTTCATATTCAT+TGG | - | chr7_1:64933129-64933148 | None:intergenic | 30.0% | |
TACATTGAATAGAGATAAGG+TGG | - | chr7_1:64933244-64933263 | None:intergenic | 30.0% | |
AATCACACCACTTAACTAAT+TGG | + | chr7_1:64933305-64933324 | Msa1030720:intron | 30.0% | |
AGCTTTACCAATTAGTTAAG+TGG | - | chr7_1:64933315-64933334 | None:intergenic | 30.0% | |
!!! | GAAACAGAGTATTTTGAAAC+AGG | + | chr7_1:64933356-64933375 | Msa1030720:intron | 30.0% |
! | AGAGCATCCACTTTATAAAA+TGG | + | chr7_1:64933420-64933439 | Msa1030720:intron | 30.0% |
! | CAATCCTCCATTTTATAAAG+TGG | - | chr7_1:64933430-64933449 | None:intergenic | 30.0% |
! | TTTGTAGAGTGATGAAGTTT+TGG | + | chr7_1:64933571-64933590 | Msa1030720:intron | 30.0% |
TCCAAGACAAGTAACAATAA+GGG | + | chr7_1:64933600-64933619 | Msa1030720:intron | 30.0% | |
AACCAAAGACCTTAAAGTTA+AGG | + | chr7_1:64934221-64934240 | Msa1030720:intron | 30.0% | |
!! | TTCCTTAACTTTAAGGTCTT+TGG | - | chr7_1:64934226-64934245 | None:intergenic | 30.0% |
AGTTAAGGAAAATACTTGTG+TGG | + | chr7_1:64934236-64934255 | Msa1030720:intron | 30.0% | |
GTTGGTATGAACATTACAAT+AGG | - | chr7_1:64934596-64934615 | None:intergenic | 30.0% | |
!! | ATAACTCAGTTGATTTTACC+CGG | - | chr7_1:64934631-64934650 | None:intergenic | 30.0% |
!!! | TTTTTTCTGTGCTTAATTGC+AGG | + | chr7_1:64934786-64934805 | Msa1030720:CDS | 30.0% |
! | TTTTTCTGTGCTTAATTGCA+GGG | + | chr7_1:64934787-64934806 | Msa1030720:CDS | 30.0% |
TATGCATAATACATAGCAGA+CGG | - | chr7_1:64934835-64934854 | None:intergenic | 30.0% | |
TCAAAGATAATGCAAGTGAA+CGG | - | chr7_1:64934875-64934894 | None:intergenic | 30.0% | |
! | TCTTTGAGTGTTAGTTTCAA+TGG | + | chr7_1:64934888-64934907 | Msa1030720:CDS | 30.0% |
TGAGTACTAATAAGGAAATG+AGG | - | chr7_1:64935004-64935023 | None:intergenic | 30.0% | |
GTTGAGGCAAATGAAAATTA+AGG | - | chr7_1:64935096-64935115 | None:intergenic | 30.0% | |
TCTCTTGAATACACAATGTA+TGG | - | chr7_1:64935239-64935258 | None:intergenic | 30.0% | |
ACATTGTGTATTCAAGAGAA+TGG | + | chr7_1:64935240-64935259 | Msa1030720:CDS | 30.0% | |
!!! | TTTTGGTAGTGTGTTAGAAA+AGG | + | chr7_1:64935427-64935446 | Msa1030720:CDS | 30.0% |
!! | TACATTGCATATTTTTGTGG+AGG | + | chr7_1:64935521-64935540 | Msa1030720:CDS | 30.0% |
!! | TATTTTTGTGGAGGAACAAT+TGG | + | chr7_1:64935530-64935549 | Msa1030720:CDS | 30.0% |
TGCACAACTAGAAACAATTA+AGG | + | chr7_1:64935771-64935790 | Msa1030720:intron | 30.0% | |
AGATTCAAGGATAATTCTGT+TGG | + | chr7_1:64935817-64935836 | Msa1030720:intron | 30.0% | |
TTGGAAAATACTATGTGGTA+GGG | + | chr7_1:64935843-64935862 | Msa1030720:intron | 30.0% | |
!!! | CATTTTGGTTTTGACTTTTG+AGG | - | chr7_1:64935918-64935937 | None:intergenic | 30.0% |
AGATAAATATCACATGTACG+TGG | + | chr7_1:64935955-64935974 | Msa1030720:intron | 30.0% | |
!!! | TGGAAATTTTTTTGGGAACA+GGG | - | chr7_1:64937648-64937667 | None:intergenic | 30.0% |
!!! | TTGGAAATTTTTTTGGGAAC+AGG | - | chr7_1:64937647-64937666 | None:intergenic | 30.0% |
CTGTATATAATTGTCAAAGG+GGG | - | chr7_1:64937618-64937637 | None:intergenic | 30.0% | |
! | TTTTATTCATTACCGCAGTT+TGG | + | chr7_1:64936228-64936247 | Msa1030720:intron | 30.0% |
TTTATTCTCCTAATATGACC+AGG | + | chr7_1:64936286-64936305 | Msa1030720:intron | 30.0% | |
! | TTTGAATGCTTTGTTGTAGA+TGG | + | chr7_1:64936483-64936502 | Msa1030720:intron | 30.0% |
TAGTTTGATATTTGCGGAAA+GGG | - | chr7_1:64936839-64936858 | None:intergenic | 30.0% | |
ATAGTTTGATATTTGCGGAA+AGG | - | chr7_1:64936840-64936859 | None:intergenic | 30.0% | |
AACGAAGATGATTTCGTTAA+TGG | + | chr7_1:64937037-64937056 | Msa1030720:intron | 30.0% | |
TGATGCTGAAATTCAAAATG+AGG | + | chr7_1:64937114-64937133 | Msa1030720:intron | 30.0% | |
!! | TAAATTTAGGTTGGCGTAAA+TGG | + | chr7_1:64937245-64937264 | Msa1030720:intron | 30.0% |
AATAAAAACTACTTTCTCCG+CGG | - | chr7_1:64937274-64937293 | None:intergenic | 30.0% | |
! | TTTTATTCATTACCGCAGTT+TGG | - | chr7_1:64936228-64936247 | None:intergenic | 30.0% |
CTGTATATAATTGTCAAAGG+GGG | + | chr7_1:64937618-64937637 | Msa1030720:intron | 30.0% | |
!!! | TTGGAAATTTTTTTGGGAAC+AGG | + | chr7_1:64937647-64937666 | Msa1030720:intron | 30.0% |
!!! | TGGAAATTTTTTTGGGAACA+GGG | + | chr7_1:64937648-64937667 | Msa1030720:intron | 30.0% |
AATAGTATTGTGTTTCACCA+AGG | + | chr7_1:64937749-64937768 | Msa1030720:intron | 30.0% | |
GTAGTGATCAAATATGTACA+GGG | - | chr7_1:64937793-64937812 | None:intergenic | 30.0% | |
TGTAGTGATCAAATATGTAC+AGG | - | chr7_1:64937794-64937813 | None:intergenic | 30.0% | |
GTTCTTCAAAACAGTTTCAA+CGG | + | chr7_1:64938054-64938073 | Msa1030720:intron | 30.0% | |
!! | ATTGGGTTGACAAAATTGTT+TGG | - | chr7_1:64938114-64938133 | None:intergenic | 30.0% |
! | CAATTTTGTCAACCCAATTA+AGG | + | chr7_1:64938116-64938135 | Msa1030720:intron | 30.0% |
ATACTATTTCAAAGGACCTA+GGG | - | chr7_1:64938160-64938179 | None:intergenic | 30.0% | |
AATACTATTTCAAAGGACCT+AGG | - | chr7_1:64938161-64938180 | None:intergenic | 30.0% | |
!! | CAAGCTTGTTGATTCTTTAA+TGG | + | chr7_1:64938200-64938219 | Msa1030720:intron | 30.0% |
!! | TGGATTAGTTATTGAGTAGA+TGG | - | chr7_1:64938365-64938384 | None:intergenic | 30.0% |
ACTAATCCACTAATGTTGAA+TGG | + | chr7_1:64938376-64938395 | Msa1030720:intron | 30.0% | |
AGATATGGCTAGTAATATGA+AGG | - | chr7_1:64938470-64938489 | None:intergenic | 30.0% | |
TTCATATTACTAGCCATATC+TGG | + | chr7_1:64938469-64938488 | Msa1030720:CDS | 30.0% | |
AGCTTAATTGGATTAAGTTC+TGG | + | chr7_1:64938520-64938539 | Msa1030720:CDS | 30.0% | |
TTCTGATGTAATAGAAACTG+CGG | - | chr7_1:64938560-64938579 | None:intergenic | 30.0% | |
GCTATATGCAGACATTTATA+TGG | + | chr7_1:64938749-64938768 | Msa1030720:CDS | 30.0% | |
ATATGCAGACATTTATATGG+TGG | + | chr7_1:64938752-64938771 | Msa1030720:CDS | 30.0% | |
TTGCATTTCAATTGTTGGAT+TGG | + | chr7_1:64938777-64938796 | Msa1030720:CDS | 30.0% | |
AGATGTATTATATCTAGGGG+TGG | - | chr7_1:64932287-64932306 | None:intergenic | 35.0% | |
! | TACATCTCCTATTTTCTTGG+TGG | + | chr7_1:64932300-64932319 | Msa1030720:five_prime_UTR | 35.0% |
GAGAGAAGAAGAAAAATGGT+TGG | + | chr7_1:64932355-64932374 | Msa1030720:exon | 35.0% | |
! | TGGTGCTAATAGCAACAATT+TGG | + | chr7_1:64932395-64932414 | Msa1030720:CDS | 35.0% |
ATTTGGATACAAGCATTCAC+AGG | + | chr7_1:64932412-64932431 | Msa1030720:CDS | 35.0% | |
TTTGGATACAAGCATTCACA+GGG | + | chr7_1:64932413-64932432 | Msa1030720:CDS | 35.0% | |
TCTTTCAGTTGCATCAGATA+TGG | + | chr7_1:64932510-64932529 | Msa1030720:CDS | 35.0% | |
CTTTCAGTTGCATCAGATAT+GGG | + | chr7_1:64932511-64932530 | Msa1030720:CDS | 35.0% | |
!! | TCAGATATGGGAAAAGCATT+TGG | + | chr7_1:64932523-64932542 | Msa1030720:CDS | 35.0% |
!! | ATATGGGAAAAGCATTTGGT+TGG | + | chr7_1:64932527-64932546 | Msa1030720:CDS | 35.0% |
! | CACTCATGTATTTTCCTTTG+TGG | + | chr7_1:64932563-64932582 | Msa1030720:CDS | 35.0% |
TTTGATCATGTCTGCTTTCT+TGG | + | chr7_1:64932591-64932610 | Msa1030720:CDS | 35.0% | |
TTGATCATGTCTGCTTTCTT+GGG | + | chr7_1:64932592-64932611 | Msa1030720:CDS | 35.0% | |
TCCCTCTTTACATTTCTACT+AGG | + | chr7_1:64932708-64932727 | Msa1030720:intron | 35.0% | |
CTTAGCTCATGTTATGTTTG+TGG | + | chr7_1:64932770-64932789 | Msa1030720:intron | 35.0% | |
CTTTCTCATGTCAAACACTT+CGG | + | chr7_1:64933035-64933054 | Msa1030720:intron | 35.0% | |
TTTCTCATGTCAAACACTTC+GGG | + | chr7_1:64933036-64933055 | Msa1030720:intron | 35.0% | |
TTCGCGCATCAAATCTATAT+TGG | - | chr7_1:64933089-64933108 | None:intergenic | 35.0% | |
!! | GGTCAACCCAAATTTTAAGA+TGG | - | chr7_1:64933155-64933174 | None:intergenic | 35.0% |
!!! | GTTTTGTAGGGTTTTAGTTG+TGG | - | chr7_1:64933176-64933195 | None:intergenic | 35.0% |
!!! | TCTTACGAGCTTGTTTTGTA+GGG | - | chr7_1:64933188-64933207 | None:intergenic | 35.0% |
!!! | ATCTTACGAGCTTGTTTTGT+AGG | - | chr7_1:64933189-64933208 | None:intergenic | 35.0% |
TCTCTATTCAATGTAAGACC+TGG | + | chr7_1:64933249-64933268 | Msa1030720:intron | 35.0% | |
CTCTATTCAATGTAAGACCT+GGG | + | chr7_1:64933250-64933269 | Msa1030720:intron | 35.0% | |
! | GTGGTGTGATTTTCCTAATT+AGG | - | chr7_1:64933296-64933315 | None:intergenic | 35.0% |
GCATCCACTTTATAAAATGG+AGG | + | chr7_1:64933423-64933442 | Msa1030720:intron | 35.0% | |
CATAACTCATGACCATCAAA+CGG | + | chr7_1:64933477-64933496 | Msa1030720:intron | 35.0% | |
! | CTTATTGTTACTTGTCTTGG+AGG | - | chr7_1:64933601-64933620 | None:intergenic | 35.0% |
CTCCAAGACAAGTAACAATA+AGG | + | chr7_1:64933599-64933618 | Msa1030720:intron | 35.0% | |
! | TCCCTTATTGTTACTTGTCT+TGG | - | chr7_1:64933604-64933623 | None:intergenic | 35.0% |
AGTAACAATAAGGGAAGAAG+AGG | + | chr7_1:64933609-64933628 | Msa1030720:intron | 35.0% | |
TTGTTGTGGAGGATAAGAAT+TGG | - | chr7_1:64933674-64933693 | None:intergenic | 35.0% | |
TAAATTGGTCAATGTCATGG+TGG | - | chr7_1:64933701-64933720 | None:intergenic | 35.0% | |
ATGAAAACACATGTTAACCG+TGG | + | chr7_1:64933772-64933791 | Msa1030720:intron | 35.0% | |
TGAAAACACATGTTAACCGT+GGG | + | chr7_1:64933773-64933792 | Msa1030720:intron | 35.0% | |
TTGGTTGTGACCAAGAAATT+GGG | - | chr7_1:64934275-64934294 | None:intergenic | 35.0% | |
TTTGGTTGTGACCAAGAAAT+TGG | - | chr7_1:64934276-64934295 | None:intergenic | 35.0% | |
TTGGTCACAACCAAAGAAAT+GGG | + | chr7_1:64934281-64934300 | Msa1030720:intron | 35.0% | |
AAGAGAGAAGAGAGAGAAAA+TGG | + | chr7_1:64934317-64934336 | Msa1030720:intron | 35.0% | |
! | ACTTTAGAGAAAGACTTGTG+TGG | - | chr7_1:64934413-64934432 | None:intergenic | 35.0% |
!! | TAACTCAGTTGATTTTACCC+GGG | - | chr7_1:64934630-64934649 | None:intergenic | 35.0% |
ACTAATAAGGAAATGAGGAG+AGG | - | chr7_1:64934999-64935018 | None:intergenic | 35.0% | |
GATTGGAGTGAGTACTAATA+AGG | - | chr7_1:64935012-64935031 | None:intergenic | 35.0% | |
TAAAGAAAAGCTTGTAGGGA+GGG | - | chr7_1:64935276-64935295 | None:intergenic | 35.0% | |
ATAAAGAAAAGCTTGTAGGG+AGG | - | chr7_1:64935277-64935296 | None:intergenic | 35.0% | |
AAGGAGAAACTTACAATGCT+TGG | + | chr7_1:64935446-64935465 | Msa1030720:CDS | 35.0% | |
!! | CAACTAAGATGTTGATTCGT+AGG | + | chr7_1:64935480-64935499 | Msa1030720:CDS | 35.0% |
!! | TAAGATGTTGATTCGTAGGT+GGG | + | chr7_1:64935484-64935503 | Msa1030720:CDS | 35.0% |
GTCCAAGTGATTGAGAAATT+TGG | - | chr7_1:64935580-64935599 | None:intergenic | 35.0% | |
ATTTCTCAATCACTTGGACA+TGG | + | chr7_1:64935581-64935600 | Msa1030720:CDS | 35.0% | |
TATGCATTAGTGGTCTTTGT+AGG | + | chr7_1:64935692-64935711 | Msa1030720:intron | 35.0% | |
! | AGGATAATTCTGTTGGTTGT+TGG | + | chr7_1:64935824-64935843 | Msa1030720:intron | 35.0% |
GGTTGTTGGAAAATACTATG+TGG | + | chr7_1:64935838-64935857 | Msa1030720:intron | 35.0% | |
GTTGGAAAATACTATGTGGT+AGG | + | chr7_1:64935842-64935861 | Msa1030720:intron | 35.0% | |
! | ATAGCCAGGATTTTCATAAG+AGG | + | chr7_1:64935891-64935910 | Msa1030720:intron | 35.0% |
! | TAGCCAGGATTTTCATAAGA+GGG | + | chr7_1:64935892-64935911 | Msa1030720:intron | 35.0% |
! | AATTTGAAACTGCGGTAATG+AGG | - | chr7_1:64937552-64937571 | None:intergenic | 35.0% |
ATTACCGCAGTTTCAAATTG+CGG | + | chr7_1:64936131-64936150 | Msa1030720:intron | 35.0% | |
! | ATTACCGCAATTTGAAACTG+CGG | - | chr7_1:64937544-64937563 | None:intergenic | 35.0% |
!! | TTTTGAACACGTCTGGAATT+AGG | + | chr7_1:64936521-64936540 | Msa1030720:intron | 35.0% |
! | TTTGAACACGTCTGGAATTA+GGG | + | chr7_1:64936522-64936541 | Msa1030720:intron | 35.0% |
ATGAGAACAAGGTAAATGCA+AGG | + | chr7_1:64936585-64936604 | Msa1030720:intron | 35.0% | |
ATATTGCCAGAATGCACTTA+AGG | - | chr7_1:64936770-64936789 | None:intergenic | 35.0% | |
!!! | GTTTCTAAAGCGTTTTGAGA+TGG | - | chr7_1:64936881-64936900 | None:intergenic | 35.0% |
! | TGAAAGAGGTGTATTGTGAT+TGG | - | chr7_1:64936916-64936935 | None:intergenic | 35.0% |
! | ATAGTGTACATTTTGTGGAG+GGG | - | chr7_1:64936948-64936967 | None:intergenic | 35.0% |
! | GATAGTGTACATTTTGTGGA+GGG | - | chr7_1:64936949-64936968 | None:intergenic | 35.0% |
! | TGAGGATAGTGTACATTTTG+TGG | - | chr7_1:64936953-64936972 | None:intergenic | 35.0% |
AAACAAACTATGTACCCCAA+TGG | + | chr7_1:64936972-64936991 | Msa1030720:intron | 35.0% | |
AGACTTTCTATGGTAGTATG+TGG | - | chr7_1:64937004-64937023 | None:intergenic | 35.0% | |
ACATACTACCATAGAAAGTC+TGG | + | chr7_1:64937003-64937022 | Msa1030720:intron | 35.0% | |
TGCTGAAATTCAAAATGAGG+AGG | + | chr7_1:64937117-64937136 | Msa1030720:intron | 35.0% | |
TGAAATTCAAAATGAGGAGG+TGG | + | chr7_1:64937120-64937139 | Msa1030720:intron | 35.0% | |
! | ATTACCGCAATTTGAAACTG+CGG | + | chr7_1:64937544-64937563 | Msa1030720:intron | 35.0% |
ATTACCGCAGTTTCAAATTG+CGG | - | chr7_1:64936131-64936150 | None:intergenic | 35.0% | |
! | AATTTGAAACTGCGGTAATG+AGG | + | chr7_1:64937552-64937571 | Msa1030720:intron | 35.0% |
ATTTGATCACTACAGCATAC+CGG | + | chr7_1:64937800-64937819 | Msa1030720:intron | 35.0% | |
GCTTATGCTATAAGCACTTA+GGG | - | chr7_1:64937841-64937860 | None:intergenic | 35.0% | |
! | TTTTGTCAACCCAATTAAGG+AGG | + | chr7_1:64938119-64938138 | Msa1030720:intron | 35.0% |
CATTTGCCATTCAACATTAG+TGG | - | chr7_1:64938385-64938404 | None:intergenic | 35.0% | |
AAGATACACTTTGCAAGAAC+TGG | + | chr7_1:64938409-64938428 | Msa1030720:CDS | 35.0% | |
AATATGAAGGCAATTGGTGT+TGG | - | chr7_1:64938457-64938476 | None:intergenic | 35.0% | |
GCTAGTAATATGAAGGCAAT+TGG | - | chr7_1:64938463-64938482 | None:intergenic | 35.0% | |
CAATTAGGCACAAGCTTAAT+TGG | + | chr7_1:64938508-64938527 | Msa1030720:CDS | 35.0% | |
TGTTTGTGATGAGGATATTG+TGG | - | chr7_1:64938612-64938631 | None:intergenic | 35.0% | |
CTAAAGGAATGTTTGTGATG+AGG | - | chr7_1:64938621-64938640 | None:intergenic | 35.0% | |
CTCATCACAAACATTCCTTT+AGG | + | chr7_1:64938619-64938638 | Msa1030720:CDS | 35.0% | |
CATAAACTAATGCTGCAAGA+AGG | - | chr7_1:64938660-64938679 | None:intergenic | 35.0% | |
TATTGAATCTCTTCTGCTTG+TGG | - | chr7_1:64938692-64938711 | None:intergenic | 35.0% | |
CAAGCAGAAGAGATTCAATA+TGG | + | chr7_1:64938692-64938711 | Msa1030720:CDS | 35.0% | |
TGGAGTTGCATTTCAATTGT+TGG | + | chr7_1:64938772-64938791 | Msa1030720:CDS | 35.0% | |
!! | CAAGCTTCTTGCTTTTCTTA+AGG | + | chr7_1:64938803-64938822 | Msa1030720:CDS | 35.0% |
!! | TCTCCTATTTTCTTGGTGGT+TGG | + | chr7_1:64932304-64932323 | Msa1030720:five_prime_UTR | 40.0% |
CTTCCAACCACCAAGAAAAT+AGG | - | chr7_1:64932310-64932329 | None:intergenic | 40.0% | |
!! | TTTTCTTGGTGGTTGGAAGA+AGG | + | chr7_1:64932311-64932330 | Msa1030720:five_prime_UTR | 40.0% |
TGGTTGGAGAATCAAGAAAG+TGG | + | chr7_1:64932371-64932390 | Msa1030720:CDS | 40.0% | |
GGTTGGAGAATCAAGAAAGT+GGG | + | chr7_1:64932372-64932391 | Msa1030720:CDS | 40.0% | |
! | AAAGCATTTGGTTGGTGTTC+TGG | + | chr7_1:64932535-64932554 | Msa1030720:CDS | 40.0% |
! | CATGTATTTTCCTTTGTGGG+TGG | + | chr7_1:64932567-64932586 | Msa1030720:CDS | 40.0% |
ATGATCAAAACCACCCACAA+AGG | - | chr7_1:64932580-64932599 | None:intergenic | 40.0% | |
TGATCATGTCTGCTTTCTTG+GGG | + | chr7_1:64932593-64932612 | Msa1030720:CDS | 40.0% | |
TGATGCGCGAATATAAATGG+AGG | + | chr7_1:64933098-64933117 | Msa1030720:intron | 40.0% | |
ATGTCAAGAAGTGAAAACCC+AGG | - | chr7_1:64933270-64933289 | None:intergenic | 40.0% | |
! | CGTTTGATGGTCATGAGTTA+TGG | - | chr7_1:64933479-64933498 | None:intergenic | 40.0% |
TTGTGGAGGATAAGAATTGG+TGG | - | chr7_1:64933671-64933690 | None:intergenic | 40.0% | |
CTGTGACATCCGTAACATAA+TGG | - | chr7_1:64934086-64934105 | None:intergenic | 40.0% | |
ACGGATGTCACAGATGAATT+TGG | + | chr7_1:64934093-64934112 | Msa1030720:intron | 40.0% | |
TAAGGGATAGGAAAGGAAAG+AGG | - | chr7_1:64934137-64934156 | None:intergenic | 40.0% | |
GAAAATACTTGTGTGGACCA+GGG | + | chr7_1:64934243-64934262 | Msa1030720:intron | 40.0% | |
TGTGACCAAGAAATTGGGTT+TGG | - | chr7_1:64934270-64934289 | None:intergenic | 40.0% | |
CTTGGTCACAACCAAAGAAA+TGG | + | chr7_1:64934280-64934299 | Msa1030720:intron | 40.0% | |
TCTCTTCTCTCCCATTTCTT+TGG | - | chr7_1:64934294-64934313 | None:intergenic | 40.0% | |
CTTTAACCAAGAGACCACTT+GGG | + | chr7_1:64934445-64934464 | Msa1030720:intron | 40.0% | |
TACCAACTAAGCTATGTTCC+CGG | + | chr7_1:64934609-64934628 | Msa1030720:intron | 40.0% | |
ATGAGAGGGAATATAGGAAG+AGG | - | chr7_1:64935148-64935167 | None:intergenic | 40.0% | |
!! | CTAAGATGTTGATTCGTAGG+TGG | + | chr7_1:64935483-64935502 | Msa1030720:CDS | 40.0% |
! | TGATTCGTAGGTGGGATTTT+TGG | + | chr7_1:64935492-64935511 | Msa1030720:CDS | 40.0% |
TTGTGGAGGAACAATTGGAT+TGG | + | chr7_1:64935535-64935554 | Msa1030720:CDS | 40.0% | |
GGCCAAATTTCTCAATCACT+TGG | + | chr7_1:64935575-64935594 | Msa1030720:CDS | 40.0% | |
GCATACCTGCTGAATAAATC+AGG | - | chr7_1:64935677-64935696 | None:intergenic | 40.0% | |
ATTCAGCAGGTATGCATTAG+TGG | + | chr7_1:64935682-64935701 | Msa1030720:intron | 40.0% | |
!! | ATCACTCATCCATTGACTCA+TGG | + | chr7_1:64935866-64935885 | Msa1030720:intron | 40.0% |
!! | TCACTCATCCATTGACTCAT+GGG | + | chr7_1:64935867-64935886 | Msa1030720:intron | 40.0% |
! | ATTACCGCAGTTTGGAATTG+CGG | + | chr7_1:64936236-64936255 | Msa1030720:intron | 40.0% |
ATTACCGCAATTCCAAACTG+CGG | - | chr7_1:64937438-64937457 | None:intergenic | 40.0% | |
TACTCGCATTAGGACTGAAA+TGG | - | chr7_1:64936368-64936387 | None:intergenic | 40.0% | |
AGTCCTAATGCGAGTACTAT+TGG | + | chr7_1:64936372-64936391 | Msa1030720:intron | 40.0% | |
GTCCTAATGCGAGTACTATT+GGG | + | chr7_1:64936373-64936392 | Msa1030720:intron | 40.0% | |
GACATGCGAAGACTAAAGAA+AGG | - | chr7_1:64936403-64936422 | None:intergenic | 40.0% | |
! | TTCTTTAGTCTTCGCATGTC+TGG | + | chr7_1:64936403-64936422 | Msa1030720:intron | 40.0% |
GTCTGGATTATGACAAAGCT+CGG | + | chr7_1:64936420-64936439 | Msa1030720:intron | 40.0% | |
TCTGGATTATGACAAAGCTC+GGG | + | chr7_1:64936421-64936440 | Msa1030720:intron | 40.0% | |
TAGTCCAGGACAAGAGTTAT+TGG | - | chr7_1:64936462-64936481 | None:intergenic | 40.0% | |
! | CAAAGCATTCAAAGTAGTCC+AGG | - | chr7_1:64936476-64936495 | None:intergenic | 40.0% |
!! | TTCTCGTTTTTGAACACGTC+TGG | + | chr7_1:64936514-64936533 | Msa1030720:intron | 40.0% |
TTTCAAGGTTGACCTACAAG+CGG | - | chr7_1:64936638-64936657 | None:intergenic | 40.0% | |
TCAACCTTGAAAGTTCCCAT+TGG | + | chr7_1:64936646-64936665 | Msa1030720:intron | 40.0% | |
! | CAGAGAAGGTATACATCTCT+CGG | + | chr7_1:64936701-64936720 | Msa1030720:intron | 40.0% |
TGTCATCCTTAAGTGCATTC+TGG | + | chr7_1:64936761-64936780 | Msa1030720:intron | 40.0% | |
!! | TTGTGATTGGTCTGGGTAAT+TGG | - | chr7_1:64936903-64936922 | None:intergenic | 40.0% |
!! | AGGTGTATTGTGATTGGTCT+GGG | - | chr7_1:64936910-64936929 | None:intergenic | 40.0% |
! | GGATAGTGTACATTTTGTGG+AGG | - | chr7_1:64936950-64936969 | None:intergenic | 40.0% |
!! | TGGGGTACATAGTTTGTTTG+AGG | - | chr7_1:64936971-64936990 | None:intergenic | 40.0% |
AGTATGTGGTTGTGACCATT+GGG | - | chr7_1:64936990-64937009 | None:intergenic | 40.0% | |
TAGTATGTGGTTGTGACCAT+TGG | - | chr7_1:64936991-64937010 | None:intergenic | 40.0% | |
TGTTCCACATGTGCAAAATG+AGG | + | chr7_1:64937075-64937094 | Msa1030720:intron | 40.0% | |
TGTGCAAAATGAGGTGGATA+TGG | + | chr7_1:64937084-64937103 | Msa1030720:intron | 40.0% | |
! | TTTTTCTTCGTACAGGTCGT+TGG | - | chr7_1:64937192-64937211 | None:intergenic | 40.0% |
ATTACCGCAATTCCAAACTG+CGG | + | chr7_1:64937438-64937457 | Msa1030720:intron | 40.0% | |
! | ATTACCGCAGTTTGGAATTG+CGG | - | chr7_1:64936236-64936255 | None:intergenic | 40.0% |
! | ACTTTCAAGTAAGAGGTCCT+TGG | - | chr7_1:64937769-64937788 | None:intergenic | 40.0% |
! | ACAGGGTACTTTCAAGTAAG+AGG | - | chr7_1:64937776-64937795 | None:intergenic | 40.0% |
TATGCTATAAGCACTTAGGG+TGG | - | chr7_1:64937838-64937857 | None:intergenic | 40.0% | |
CGCTTATGCTATAAGCACTT+AGG | - | chr7_1:64937842-64937861 | None:intergenic | 40.0% | |
TTGTCATGGCCTCCTTAATT+GGG | - | chr7_1:64938131-64938150 | None:intergenic | 40.0% | |
ATTGTCATGGCCTCCTTAAT+TGG | - | chr7_1:64938132-64938151 | None:intergenic | 40.0% | |
! | TTAATGGGTGAGTGACTAAG+TGG | + | chr7_1:64938216-64938235 | Msa1030720:intron | 40.0% |
TACACTTTGCAAGAACTGGA+TGG | + | chr7_1:64938413-64938432 | Msa1030720:CDS | 40.0% | |
!!! | TGCTGTTTTAGTGCCAGATA+TGG | - | chr7_1:64938485-64938504 | None:intergenic | 40.0% |
TGATGTAATAGAAACTGCGG+CGG | - | chr7_1:64938557-64938576 | None:intergenic | 40.0% | |
CTATTTGGTCCAAACAGTGT+TGG | + | chr7_1:64938580-64938599 | Msa1030720:CDS | 40.0% | |
TGGTTCATACCAACACTGTT+TGG | - | chr7_1:64938592-64938611 | None:intergenic | 40.0% | |
CCATAGAGACATGAACCTAA+AGG | - | chr7_1:64938637-64938656 | None:intergenic | 40.0% | |
! | CCTTTAGGTTCATGTCTCTA+TGG | + | chr7_1:64938634-64938653 | Msa1030720:CDS | 40.0% |
ATAAAATCCGTCATGGGCAC+GGG | - | chr7_1:64932233-64932252 | None:intergenic | 45.0% | |
GATAAAATCCGTCATGGGCA+CGG | - | chr7_1:64932234-64932253 | None:intergenic | 45.0% | |
TGGAGAATCAAGAAAGTGGG+TGG | + | chr7_1:64932375-64932394 | Msa1030720:CDS | 45.0% | |
TTCTTGGGGCTTCTTGGTTA+TGG | + | chr7_1:64932607-64932626 | Msa1030720:CDS | 45.0% | |
!! | ATGGTGGAGATTTGTTGTGG+AGG | - | chr7_1:64933685-64933704 | None:intergenic | 45.0% |
!! | GTCATGGTGGAGATTTGTTG+TGG | - | chr7_1:64933688-64933707 | None:intergenic | 45.0% |
AAACACATGTTAACCGTGGG+TGG | + | chr7_1:64933776-64933795 | Msa1030720:intron | 45.0% | |
AACACATGTTAACCGTGGGT+GGG | + | chr7_1:64933777-64933796 | Msa1030720:intron | 45.0% | |
GTACACGTAAGGGATAGGAA+AGG | - | chr7_1:64934144-64934163 | None:intergenic | 45.0% | |
! | AAGAGGTACACGTAAGGGAT+AGG | - | chr7_1:64934149-64934168 | None:intergenic | 45.0% |
! | TAGGCAAGAGGTACACGTAA+GGG | - | chr7_1:64934154-64934173 | None:intergenic | 45.0% |
! | TTAGGCAAGAGGTACACGTA+AGG | - | chr7_1:64934155-64934174 | None:intergenic | 45.0% |
AGAGCTGGTTAGGATGAAGT+TGG | - | chr7_1:64934199-64934218 | None:intergenic | 45.0% | |
! | CTTTGGTTCAAGAGCTGGTT+AGG | - | chr7_1:64934209-64934228 | None:intergenic | 45.0% |
! | AAGGTCTTTGGTTCAAGAGC+TGG | - | chr7_1:64934214-64934233 | None:intergenic | 45.0% |
GGAAAATACTTGTGTGGACC+AGG | + | chr7_1:64934242-64934261 | Msa1030720:intron | 45.0% | |
! | AAGAAATTGGGTTTGGTCCC+TGG | - | chr7_1:64934263-64934282 | None:intergenic | 45.0% |
AGGGACCAAACCCAATTTCT+TGG | + | chr7_1:64934262-64934281 | Msa1030720:intron | 45.0% | |
TGTGACCAAACCCAATTGTG+TGG | + | chr7_1:64934380-64934399 | Msa1030720:intron | 45.0% | |
CCAAGTGGTCTCTTGGTTAA+AGG | - | chr7_1:64934447-64934466 | None:intergenic | 45.0% | |
CCTTTAACCAAGAGACCACT+TGG | + | chr7_1:64934444-64934463 | Msa1030720:intron | 45.0% | |
ACCAACTAAGCTATGTTCCC+GGG | + | chr7_1:64934610-64934629 | Msa1030720:intron | 45.0% | |
! | GGCATTGAGCAAGAGATAGA+GGG | - | chr7_1:64934970-64934989 | None:intergenic | 45.0% |
GGAAATGAGGAGAGGAACAA+GGG | - | chr7_1:64934991-64935010 | None:intergenic | 45.0% | |
AGGAAATGAGGAGAGGAACA+AGG | - | chr7_1:64934992-64935011 | None:intergenic | 45.0% | |
! | ATTGCGACAATGAAGGGTGT+CGG | - | chr7_1:64935066-64935085 | None:intergenic | 45.0% |
ATCGCGATTGCGACAATGAA+GGG | - | chr7_1:64935072-64935091 | None:intergenic | 45.0% | |
AATCGCGATTGCGACAATGA+AGG | - | chr7_1:64935073-64935092 | None:intergenic | 45.0% | |
TAACAAGGGCAAGGATGTTG+AGG | - | chr7_1:64935112-64935131 | None:intergenic | 45.0% | |
AACATCCTTGCCCTTGTTAC+AGG | + | chr7_1:64935113-64935132 | Msa1030720:CDS | 45.0% | |
GAGGTAGATGCCTGTAACAA+GGG | - | chr7_1:64935126-64935145 | None:intergenic | 45.0% | |
AGAGGGAATATAGGAAGAGG+AGG | - | chr7_1:64935145-64935164 | None:intergenic | 45.0% | |
ATAGCTCGTGCTATCCTTGT+CGG | + | chr7_1:64935179-64935198 | Msa1030720:CDS | 45.0% | |
!! | GCAAGAACAAAAGCATTGCC+AGG | - | chr7_1:64935217-64935236 | None:intergenic | 45.0% |
TGCAAGAAGGCGACCAAAAA+AGG | - | chr7_1:64935648-64935667 | None:intergenic | 45.0% | |
CTGCACCTGATTTATTCAGC+AGG | + | chr7_1:64935669-64935688 | Msa1030720:CDS | 45.0% | |
AGGCCCTCTTATGAAAATCC+TGG | - | chr7_1:64935898-64935917 | None:intergenic | 45.0% | |
TTGTCAAAGGGGGTCAGATT+TGG | - | chr7_1:64937628-64937647 | None:intergenic | 45.0% | |
TACAGAAATGACCCCCTTTC+TGG | + | chr7_1:64936079-64936098 | Msa1030720:intron | 45.0% | |
TAGGACTGAAATGGACGATG+AGG | - | chr7_1:64936359-64936378 | None:intergenic | 45.0% | |
GACCCAATAGTACTCGCATT+AGG | - | chr7_1:64936378-64936397 | None:intergenic | 45.0% | |
GCAGCTATGACATGAGAACA+AGG | + | chr7_1:64936574-64936593 | Msa1030720:intron | 45.0% | |
TTCAAGGTTGACCTACAAGC+GGG | - | chr7_1:64936637-64936656 | None:intergenic | 45.0% | |
AAGGCCAATGGGAACTTTCA+AGG | - | chr7_1:64936653-64936672 | None:intergenic | 45.0% | |
TCGTGAGACCATCAACTACA+GGG | - | chr7_1:64936680-64936699 | None:intergenic | 45.0% | |
TTCGTGAGACCATCAACTAC+AGG | - | chr7_1:64936681-64936700 | None:intergenic | 45.0% | |
CTGTTCGACATGATGTGTGT+TGG | + | chr7_1:64936729-64936748 | Msa1030720:intron | 45.0% | |
ATATTTGCGGAAAGGGCTCA+AGG | - | chr7_1:64936832-64936851 | None:intergenic | 45.0% | |
! | GAGGTGTATTGTGATTGGTC+TGG | - | chr7_1:64936911-64936930 | None:intergenic | 45.0% |
! | TGTACATTTTGTGGAGGGGT+TGG | - | chr7_1:64936944-64936963 | None:intergenic | 45.0% |
GTATGTGGTTGTGACCATTG+GGG | - | chr7_1:64936989-64937008 | None:intergenic | 45.0% | |
TCCACATGTGCAAAATGAGG+TGG | + | chr7_1:64937078-64937097 | Msa1030720:intron | 45.0% | |
! | TCCACCTCATTTTGCACATG+TGG | - | chr7_1:64937082-64937101 | None:intergenic | 45.0% |
TCAAAATGAGGAGGTGGATG+AGG | + | chr7_1:64937126-64937145 | Msa1030720:intron | 45.0% | |
TACAGAAATGACCCCCTTTC+TGG | - | chr7_1:64936079-64936098 | None:intergenic | 45.0% | |
TTGTCAAAGGGGGTCAGATT+TGG | + | chr7_1:64937628-64937647 | Msa1030720:intron | 45.0% | |
ACCTAGGGATGTCATTGTCA+TGG | - | chr7_1:64938145-64938164 | None:intergenic | 45.0% | |
!! | GGCAATTGGTGTTGGTATCA+AGG | - | chr7_1:64938449-64938468 | None:intergenic | 45.0% |
CGTGAGATGTCAATGTGCAT+GGG | + | chr7_1:64938718-64938737 | Msa1030720:CDS | 45.0% | |
AGATGTCAATGTGCATGGGA+AGG | + | chr7_1:64938722-64938741 | Msa1030720:CDS | 45.0% | |
!! | ATATATATATATATATATTC+AGG | + | chr7_1:64932964-64932983 | Msa1030720:intron | 5.0% |
!! | CAAAAAAAAAAATTTAAATT+AGG | - | chr7_1:64934173-64934192 | None:intergenic | 5.0% |
!!! | ATTTAATCTAATTTTAAATT+AGG | - | chr7_1:64934480-64934499 | None:intergenic | 5.0% |
TAAAATCCGTCATGGGCACG+GGG | - | chr7_1:64932232-64932251 | None:intergenic | 50.0% | |
CCGCGGATAAAATCCGTCAT+GGG | - | chr7_1:64932239-64932258 | None:intergenic | 50.0% | |
!!! | CCCATGACGGATTTTATCCG+CGG | + | chr7_1:64932236-64932255 | Msa1030720:five_prime_UTR | 50.0% |
!!! | CCATGACGGATTTTATCCGC+GGG | + | chr7_1:64932237-64932256 | Msa1030720:five_prime_UTR | 50.0% |
TCTGCTTTCTTGGGGCTTCT+TGG | + | chr7_1:64932601-64932620 | Msa1030720:CDS | 50.0% | |
GGAAGAAGAGGATCCAGTTC+TGG | + | chr7_1:64933621-64933640 | Msa1030720:intron | 50.0% | |
TTCTGGTGACCCACCATGAT+TGG | + | chr7_1:64933638-64933657 | Msa1030720:intron | 50.0% | |
CAGGACCACACAATTGGGTT+TGG | - | chr7_1:64934388-64934407 | None:intergenic | 50.0% | |
CAAACCCAATTGTGTGGTCC+TGG | + | chr7_1:64934386-64934405 | Msa1030720:intron | 50.0% | |
TGGACCAGGACCACACAATT+GGG | - | chr7_1:64934393-64934412 | None:intergenic | 50.0% | |
GAGAAAGACTTGTGTGGACC+AGG | - | chr7_1:64934407-64934426 | None:intergenic | 50.0% | |
ACCCGGGAACATAGCTTAGT+TGG | - | chr7_1:64934614-64934633 | None:intergenic | 50.0% | |
!! | GGGCATTGAGCAAGAGATAG+AGG | - | chr7_1:64934971-64934990 | None:intergenic | 50.0% |
!! | GGCTGTGGTTGGTAAAGGAT+TGG | - | chr7_1:64935029-64935048 | None:intergenic | 50.0% |
! | AATTTTGCTGCGGCTGTGGT+TGG | - | chr7_1:64935040-64935059 | None:intergenic | 50.0% |
!! | GTGTCGGTGGAATTTTGCTG+CGG | - | chr7_1:64935050-64935069 | None:intergenic | 50.0% |
AGATGCCTGTAACAAGGGCA+AGG | - | chr7_1:64935121-64935140 | None:intergenic | 50.0% | |
GGAGGTAGATGCCTGTAACA+AGG | - | chr7_1:64935127-64935146 | None:intergenic | 50.0% | |
GGGACGATGAGAGGGAATAT+AGG | - | chr7_1:64935154-64935173 | None:intergenic | 50.0% | |
TATGGTTGGGGACGATGAGA+GGG | - | chr7_1:64935162-64935181 | None:intergenic | 50.0% | |
GATAGCACGAGCTATGGTTG+GGG | - | chr7_1:64935174-64935193 | None:intergenic | 50.0% | |
GGATAGCACGAGCTATGGTT+GGG | - | chr7_1:64935175-64935194 | None:intergenic | 50.0% | |
AGGATAGCACGAGCTATGGT+TGG | - | chr7_1:64935176-64935195 | None:intergenic | 50.0% | |
GACAAGGATAGCACGAGCTA+TGG | - | chr7_1:64935180-64935199 | None:intergenic | 50.0% | |
AATCAGGTGCAGCTGCAAGA+AGG | - | chr7_1:64935661-64935680 | None:intergenic | 50.0% | |
TGGCTATGCCCATGAGTCAA+TGG | - | chr7_1:64935878-64935897 | None:intergenic | 50.0% | |
! | ATTGACTCATGGGCATAGCC+AGG | + | chr7_1:64935877-64935896 | Msa1030720:intron | 50.0% |
GTCGGCATCCTGGTCATATT+AGG | - | chr7_1:64936297-64936316 | None:intergenic | 50.0% | |
GACTGAAATGGACGATGAGG+TGG | - | chr7_1:64936356-64936375 | None:intergenic | 50.0% | |
AAAGCTCGGGACCTTCGTAT+GGG | + | chr7_1:64936434-64936453 | Msa1030720:intron | 50.0% | |
AGTTATTGGCCCCCATACGA+AGG | - | chr7_1:64936448-64936467 | None:intergenic | 50.0% | |
TCAAGGTTGACCTACAAGCG+GGG | - | chr7_1:64936636-64936655 | None:intergenic | 50.0% | |
GAGACCATCAACTACAGGGA+GGG | - | chr7_1:64936676-64936695 | None:intergenic | 50.0% | |
TGAGACCATCAACTACAGGG+AGG | - | chr7_1:64936677-64936696 | None:intergenic | 50.0% | |
GATGGTCTCACGAACAGAGA+AGG | + | chr7_1:64936687-64936706 | Msa1030720:intron | 50.0% | |
!! | GTAGGTTCTGGAGACGTGTT+CGG | - | chr7_1:64936796-64936815 | None:intergenic | 50.0% |
!! | AGGGGTTGGTAGGTTGAAAG+AGG | - | chr7_1:64936930-64936949 | None:intergenic | 50.0% |
!! | CATTTTGTGGAGGGGTTGGT+AGG | - | chr7_1:64936940-64936959 | None:intergenic | 50.0% |
ACCATAGAAAGTCTGGCTGC+AGG | + | chr7_1:64937010-64937029 | Msa1030720:intron | 50.0% | |
CCATAGAAAGTCTGGCTGCA+GGG | + | chr7_1:64937011-64937030 | Msa1030720:intron | 50.0% | |
TCTTGCTCTTCCTCTTCCTC+GGG | - | chr7_1:64937169-64937188 | None:intergenic | 50.0% | |
GTCTTGCTCTTCCTCTTCCT+CGG | - | chr7_1:64937170-64937189 | None:intergenic | 50.0% | |
GTTGGCGTAAATGGTTACCG+CGG | + | chr7_1:64937254-64937273 | Msa1030720:intron | 50.0% | |
TACAGCATACCGGCCTACTA+TGG | + | chr7_1:64937810-64937829 | Msa1030720:intron | 50.0% | |
ACTTAGGGTGGCACCATAGT+AGG | - | chr7_1:64937826-64937845 | None:intergenic | 50.0% | |
GCCATGACAATGACATCCCT+AGG | + | chr7_1:64938141-64938160 | Msa1030720:intron | 50.0% | |
GCGTGAGATGTCAATGTGCA+TGG | + | chr7_1:64938717-64938736 | Msa1030720:CDS | 50.0% | |
CCCGCGGATAAAATCCGTCA+TGG | - | chr7_1:64932240-64932259 | None:intergenic | 55.0% | |
! | ATTTTATCCGCGGGTACCCG+CGG | + | chr7_1:64932246-64932265 | Msa1030720:five_prime_UTR | 55.0% |
GCAAAAAAATCCGTGCCCGC+GGG | - | chr7_1:64932265-64932284 | None:intergenic | 55.0% | |
GGCAAAAAAATCCGTGCCCG+CGG | - | chr7_1:64932266-64932285 | None:intergenic | 55.0% | |
CGGGTGTGCGCGAATACAAA+TGG | + | chr7_1:64933055-64933074 | Msa1030720:intron | 55.0% | |
!! | TCATGGTGGGTCACCAGAAC+TGG | - | chr7_1:64933637-64933656 | None:intergenic | 55.0% |
GACCCACCATGATTGGTGAG+AGG | + | chr7_1:64933645-64933664 | Msa1030720:intron | 55.0% | |
GGCCTCTCACCAATCATGGT+GGG | - | chr7_1:64933650-64933669 | None:intergenic | 55.0% | |
TGGCCTCTCACCAATCATGG+TGG | - | chr7_1:64933651-64933670 | None:intergenic | 55.0% | |
TGGTGGCCTCTCACCAATCA+TGG | - | chr7_1:64933654-64933673 | None:intergenic | 55.0% | |
ATGTTAACCGTGGGTGGGAG+TGG | + | chr7_1:64933782-64933801 | Msa1030720:intron | 55.0% | |
TGTTAACCGTGGGTGGGAGT+GGG | + | chr7_1:64933783-64933802 | Msa1030720:intron | 55.0% | |
GTGGACCAGGACCACACAAT+TGG | - | chr7_1:64934394-64934413 | None:intergenic | 55.0% | |
TTGCAGGGTGTAGCATCTGC+TGG | + | chr7_1:64934802-64934821 | Msa1030720:CDS | 55.0% | |
! | GTGGAATTTTGCTGCGGCTG+TGG | - | chr7_1:64935044-64935063 | None:intergenic | 55.0% |
CTATGGTTGGGGACGATGAG+AGG | - | chr7_1:64935163-64935182 | None:intergenic | 55.0% | |
! | GGAGAATAATCGCGCCGACA+AGG | - | chr7_1:64935196-64935215 | None:intergenic | 55.0% |
TGTCGGCGCGATTATTCTCC+TGG | + | chr7_1:64935196-64935215 | Msa1030720:CDS | 55.0% | |
AGCCACCTTTCTGACACGCA+TGG | + | chr7_1:64936159-64936178 | Msa1030720:intron | 55.0% | |
TGCCATGCGTGTCAGAAAGG+TGG | - | chr7_1:64937518-64937537 | None:intergenic | 55.0% | |
ACCTTTCTGACACGCATGGC+AGG | + | chr7_1:64936163-64936182 | Msa1030720:intron | 55.0% | |
! | CGAGACTGTGTGGGTTGTGT+CGG | - | chr7_1:64936315-64936334 | None:intergenic | 55.0% |
CGACACAACCCACACAGTCT+CGG | + | chr7_1:64936313-64936332 | Msa1030720:intron | 55.0% | |
! | AACCCACACAGTCTCGGTGT+CGG | + | chr7_1:64936319-64936338 | Msa1030720:intron | 55.0% |
CAAAGCTCGGGACCTTCGTA+TGG | + | chr7_1:64936433-64936452 | Msa1030720:intron | 55.0% | |
AAGCTCGGGACCTTCGTATG+GGG | + | chr7_1:64936435-64936454 | Msa1030720:intron | 55.0% | |
GGGGCCAATAACTCTTGTCC+TGG | + | chr7_1:64936455-64936474 | Msa1030720:intron | 55.0% | |
AAGCGGGGTGGTGTGATTGT+GGG | - | chr7_1:64936621-64936640 | None:intergenic | 55.0% | |
AATCACACCACCCCGCTTGT+AGG | + | chr7_1:64936623-64936642 | Msa1030720:intron | 55.0% | |
TACAGGGAGGGAAGGCCAAT+GGG | - | chr7_1:64936664-64936683 | None:intergenic | 55.0% | |
CCATCAACTACAGGGAGGGA+AGG | - | chr7_1:64936672-64936691 | None:intergenic | 55.0% | |
CCTTCCCTCCCTGTAGTTGA+TGG | + | chr7_1:64936669-64936688 | Msa1030720:intron | 55.0% | |
GCGTTTGCAAGGGTAGGTTC+TGG | - | chr7_1:64936808-64936827 | None:intergenic | 55.0% | |
CAAGGTGCGTTTGCAAGGGT+AGG | - | chr7_1:64936814-64936833 | None:intergenic | 55.0% | |
GGCTCAAGGTGCGTTTGCAA+GGG | - | chr7_1:64936818-64936837 | None:intergenic | 55.0% | |
CCCTGCAGCCAGACTTTCTA+TGG | - | chr7_1:64937014-64937033 | None:intergenic | 55.0% | |
TGAGGAGGTGGATGAGGAAG+AGG | + | chr7_1:64937132-64937151 | Msa1030720:intron | 55.0% | |
GGTGGATGAGGAAGAGGAAG+AGG | + | chr7_1:64937138-64937157 | Msa1030720:intron | 55.0% | |
ACCTTTCTGACACGCATGGC+AGG | - | chr7_1:64936163-64936182 | None:intergenic | 55.0% | |
TGCCATGCGTGTCAGAAAGG+TGG | + | chr7_1:64937518-64937537 | Msa1030720:intron | 55.0% | |
AGCCACCTTTCTGACACGCA+TGG | - | chr7_1:64936159-64936178 | None:intergenic | 55.0% | |
! | TTTTATCCGCGGGTACCCGC+GGG | + | chr7_1:64932247-64932266 | Msa1030720:five_prime_UTR | 60.0% |
GTATCTCCCACTCCCACCCA+CGG | - | chr7_1:64933792-64933811 | None:intergenic | 60.0% | |
CCAAGAGACCACTTGGGAGC+CGG | + | chr7_1:64934451-64934470 | Msa1030720:intron | 60.0% | |
! | TTAGGCAACCGGCTCCCAAG+TGG | - | chr7_1:64934462-64934481 | None:intergenic | 60.0% |
!! | GCTGCGGCTGTGGTTGGTAA+AGG | - | chr7_1:64935034-64935053 | None:intergenic | 60.0% |
!! | GCGACAATGAAGGGTGTCGG+TGG | - | chr7_1:64935063-64935082 | None:intergenic | 60.0% |
GCCTGCCATGCGTGTCAGAA+AGG | - | chr7_1:64937515-64937534 | None:intergenic | 60.0% | |
TTCTGACACGCATGGCAGGC+TGG | + | chr7_1:64936167-64936186 | Msa1030720:intron | 60.0% | |
! | TGTGGGTTGTGTCGGCATCC+TGG | - | chr7_1:64936307-64936326 | None:intergenic | 60.0% |
CACCGACACCGAGACTGTGT+GGG | - | chr7_1:64936324-64936343 | None:intergenic | 60.0% | |
ACACCGACACCGAGACTGTG+TGG | - | chr7_1:64936325-64936344 | None:intergenic | 60.0% | |
AGCTCGGGACCTTCGTATGG+GGG | + | chr7_1:64936436-64936455 | Msa1030720:intron | 60.0% | |
CAAGCGGGGTGGTGTGATTG+TGG | - | chr7_1:64936622-64936641 | None:intergenic | 60.0% | |
AGGTTGACCTACAAGCGGGG+TGG | - | chr7_1:64936633-64936652 | None:intergenic | 60.0% | |
CTACAGGGAGGGAAGGCCAA+TGG | - | chr7_1:64936665-64936684 | None:intergenic | 60.0% | |
GGGCTCAAGGTGCGTTTGCA+AGG | - | chr7_1:64936819-64936838 | None:intergenic | 60.0% | |
AGAGGAAGAGGAAGAGCCCG+AGG | + | chr7_1:64937150-64937169 | Msa1030720:intron | 60.0% | |
AGAGGAAGAGCCCGAGGAAG+AGG | + | chr7_1:64937156-64937175 | Msa1030720:intron | 60.0% | |
TCTGACACGCATGGCAGGCT+CGG | - | chr7_1:64936168-64936187 | None:intergenic | 60.0% | |
GCCTGCCATGCGTGTCAGAA+AGG | + | chr7_1:64937515-64937534 | Msa1030720:intron | 60.0% | |
AGGGTGGCACCATAGTAGGC+CGG | - | chr7_1:64937822-64937841 | None:intergenic | 60.0% | |
AATCCGTCATGGGCACGGGG+CGG | - | chr7_1:64932229-64932248 | None:intergenic | 65.0% | |
CCGGCTCCCAAGTGGTCTCT+TGG | - | chr7_1:64934454-64934473 | None:intergenic | 65.0% | |
ACGCATGGCAGGCTGGCAGA+GGG | + | chr7_1:64936174-64936193 | Msa1030720:intron | 65.0% | |
TACCCGCCCCGTGCCCATGA+CGG | + | chr7_1:64932223-64932242 | Msa1030720:five_prime_UTR | 70.0% | |
ATCCGTCATGGGCACGGGGC+GGG | - | chr7_1:64932228-64932247 | None:intergenic | 70.0% | |
CACGCATGGCAGGCTGGCAG+AGG | + | chr7_1:64936173-64936192 | Msa1030720:intron | 70.0% | |
CGCATGGCAGGCTGGCAGAG+GGG | + | chr7_1:64936175-64936194 | Msa1030720:intron | 70.0% | |
GCATGGCAGGCTCGGCAGAG+GGG | - | chr7_1:64937506-64937525 | None:intergenic | 70.0% | |
CGCATGGCAGGCTCGGCAGA+GGG | - | chr7_1:64937507-64937526 | None:intergenic | 70.0% | |
ACGCATGGCAGGCTCGGCAG+AGG | - | chr7_1:64937508-64937527 | None:intergenic | 70.0% | |
GCAGGCTGGCAGAGGGGAGC+AGG | + | chr7_1:64936181-64936200 | Msa1030720:intron | 75.0% | |
CAGGCTCGGCAGAGGGGAGC+AGG | - | chr7_1:64937500-64937519 | None:intergenic | 75.0% | |
! | TCCGCGGGTACCCGCGGGCA+CGG | + | chr7_1:64932252-64932271 | Msa1030720:five_prime_UTR | 80.0% |
! | TCCGTGCCCGCGGGTACCCG+CGG | - | chr7_1:64932256-64932275 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_1 | gene | 64932218 | 64938909 | 64932218 | ID=Msa1030720;Name=Msa1030720 |
chr7_1 | mRNA | 64932218 | 64938909 | 64932218 | ID=Msa1030720-mRNA-1;Parent=Msa1030720;Name=Msa1030720-mRNA-1;_AED=0.03;_eAED=0.03;_QI=152|1|1|1|1|1|3|21|565 |
chr7_1 | exon | 64932218 | 64932678 | 64932218 | ID=Msa1030720-mRNA-1:exon:14312;Parent=Msa1030720-mRNA-1 |
chr7_1 | exon | 64934783 | 64935690 | 64934783 | ID=Msa1030720-mRNA-1:exon:14313;Parent=Msa1030720-mRNA-1 |
chr7_1 | exon | 64938408 | 64938909 | 64938408 | ID=Msa1030720-mRNA-1:exon:14314;Parent=Msa1030720-mRNA-1 |
chr7_1 | five_prime_UTR | 64932218 | 64932369 | 64932218 | ID=Msa1030720-mRNA-1:five_prime_utr;Parent=Msa1030720-mRNA-1 |
chr7_1 | CDS | 64932370 | 64932678 | 64932370 | ID=Msa1030720-mRNA-1:cds;Parent=Msa1030720-mRNA-1 |
chr7_1 | CDS | 64934783 | 64935690 | 64934783 | ID=Msa1030720-mRNA-1:cds;Parent=Msa1030720-mRNA-1 |
chr7_1 | CDS | 64938408 | 64938888 | 64938408 | ID=Msa1030720-mRNA-1:cds;Parent=Msa1030720-mRNA-1 |
chr7_1 | three_prime_UTR | 64938889 | 64938909 | 64938889 | ID=Msa1030720-mRNA-1:three_prime_utr;Parent=Msa1030720-mRNA-1 |
Gene Sequence |
Protein sequence |