Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1030760 | XP_003624478.1 | 98.660 | 373 | 2 | 1 | 1 | 370 | 1 | 373 | 0.0 | 741 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1030760 | sp|Q9FMU6|MPCP3_ARATH | 78.904 | 365 | 69 | 2 | 7 | 363 | 2 | 366 | 0.0 | 574 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1030760 | Q2HUK6 | 98.660 | 373 | 2 | 1 | 1 | 370 | 1 | 373 | 0.0 | 741 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1030760 | Msa1119970 | 0.900650 | 5.922728e-78 | -8.615850e-47 |
| Msa1030760 | Msa1157630 | 0.921550 | 3.099514e-88 | -8.615850e-47 |
| Msa1030760 | Msa1237650 | 0.808132 | 3.599329e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1030760 | MtrunA17_Chr7g0251981 | 98.660 | 373 | 2 | 1 | 1 | 370 | 1 | 373 | 0.0 | 741 |
| Msa1030760 | MtrunA17_Chr8g0385891 | 77.299 | 348 | 74 | 2 | 6 | 353 | 5 | 347 | 0.0 | 545 |
| Msa1030760 | MtrunA17_Chr6g0461981 | 71.633 | 349 | 89 | 2 | 11 | 358 | 3 | 342 | 0.0 | 517 |
| Msa1030760 | MtrunA17_Chr5g0407451 | 49.655 | 290 | 142 | 1 | 71 | 360 | 13 | 298 | 1.86e-101 | 302 |
| Msa1030760 | MtrunA17_Chr4g0051841 | 43.253 | 289 | 162 | 1 | 74 | 360 | 24 | 312 | 1.13e-87 | 267 |
| Msa1030760 | MtrunA17_Chr6g0463351 | 29.008 | 262 | 150 | 9 | 89 | 331 | 77 | 321 | 2.91e-16 | 79.3 |
| Msa1030760 | MtrunA17_Chr3g0137941 | 26.339 | 224 | 156 | 5 | 44 | 264 | 86 | 303 | 8.53e-16 | 78.2 |
| Msa1030760 | MtrunA17_Chr2g0296061 | 24.686 | 239 | 155 | 4 | 79 | 295 | 15 | 250 | 1.52e-13 | 70.9 |
| Msa1030760 | MtrunA17_Chr2g0296061 | 26.263 | 198 | 119 | 7 | 75 | 249 | 125 | 318 | 4.30e-11 | 63.5 |
| Msa1030760 | MtrunA17_Chr8g0372531 | 25.714 | 210 | 121 | 7 | 68 | 253 | 105 | 303 | 3.10e-13 | 69.7 |
| Msa1030760 | MtrunA17_Chr8g0347451 | 27.863 | 262 | 166 | 9 | 73 | 315 | 43 | 300 | 3.30e-13 | 70.1 |
| Msa1030760 | MtrunA17_Chr8g0347451 | 24.737 | 190 | 119 | 5 | 86 | 251 | 160 | 349 | 3.73e-12 | 67.0 |
| Msa1030760 | MtrunA17_Chr1g0149111 | 27.322 | 183 | 129 | 3 | 82 | 264 | 142 | 320 | 3.43e-13 | 70.5 |
| Msa1030760 | MtrunA17_Chr5g0396801 | 25.789 | 190 | 119 | 5 | 86 | 253 | 147 | 336 | 3.48e-13 | 70.1 |
| Msa1030760 | MtrunA17_Chr5g0396801 | 27.984 | 243 | 149 | 9 | 71 | 295 | 28 | 262 | 2.85e-12 | 67.4 |
| Msa1030760 | MtrunA17_Chr7g0252401 | 30.493 | 223 | 142 | 6 | 75 | 293 | 204 | 417 | 7.01e-13 | 69.7 |
| Msa1030760 | MtrunA17_Chr4g0067231 | 23.750 | 240 | 158 | 4 | 79 | 295 | 14 | 251 | 7.20e-13 | 68.9 |
| Msa1030760 | MtrunA17_Chr4g0067231 | 24.390 | 205 | 126 | 7 | 75 | 255 | 126 | 325 | 3.78e-11 | 63.5 |
| Msa1030760 | MtrunA17_Chr8g0385571 | 30.734 | 218 | 136 | 7 | 80 | 293 | 229 | 435 | 1.42e-12 | 68.9 |
| Msa1030760 | MtrunA17_Chr3g0131501 | 30.000 | 220 | 135 | 8 | 80 | 293 | 207 | 413 | 2.74e-12 | 67.8 |
| Msa1030760 | MtrunA17_Chr7g0269701 | 28.421 | 190 | 117 | 6 | 89 | 264 | 133 | 317 | 3.23e-12 | 67.0 |
| Msa1030760 | MtrunA17_Chr4g0063561 | 25.824 | 182 | 124 | 4 | 82 | 259 | 126 | 300 | 1.56e-11 | 65.1 |
| Msa1030760 | MtrunA17_Chr5g0431531 | 25.874 | 286 | 184 | 7 | 80 | 350 | 41 | 313 | 6.13e-11 | 63.2 |
| Msa1030760 | MtrunA17_Chr1g0195101 | 27.746 | 173 | 105 | 6 | 93 | 251 | 33 | 199 | 6.71e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1030760 | AT5G14040.1 | 78.904 | 365 | 69 | 2 | 7 | 363 | 2 | 366 | 0.0 | 574 |
| Msa1030760 | AT3G48850.1 | 68.820 | 356 | 108 | 1 | 7 | 362 | 2 | 354 | 0.0 | 510 |
| Msa1030760 | AT2G17270.1 | 50.993 | 302 | 143 | 3 | 68 | 368 | 11 | 308 | 3.47e-107 | 317 |
| Msa1030760 | AT5G66380.1 | 26.636 | 214 | 122 | 8 | 68 | 258 | 102 | 303 | 5.76e-14 | 72.4 |
| Msa1030760 | AT5G51050.1 | 29.474 | 285 | 168 | 12 | 80 | 348 | 225 | 492 | 6.18e-14 | 73.6 |
| Msa1030760 | AT1G25380.1 | 27.895 | 190 | 121 | 6 | 89 | 266 | 131 | 316 | 2.86e-13 | 70.9 |
| Msa1030760 | AT1G25380.2 | 27.895 | 190 | 121 | 6 | 89 | 266 | 131 | 316 | 2.86e-13 | 70.9 |
| Msa1030760 | AT3G53940.1 | 28.729 | 181 | 114 | 6 | 80 | 251 | 182 | 356 | 8.30e-13 | 69.3 |
| Msa1030760 | AT1G79900.1 | 25.253 | 198 | 144 | 3 | 67 | 264 | 98 | 291 | 1.31e-12 | 68.2 |
| Msa1030760 | AT4G01100.2 | 25.794 | 252 | 157 | 8 | 71 | 295 | 32 | 280 | 1.42e-12 | 68.6 |
| Msa1030760 | AT4G01100.1 | 26.778 | 239 | 157 | 8 | 71 | 295 | 32 | 266 | 1.94e-12 | 68.2 |
| Msa1030760 | AT5G48970.1 | 25.373 | 201 | 120 | 6 | 75 | 249 | 132 | 328 | 1.31e-11 | 65.5 |
| Msa1030760 | AT5G48970.1 | 23.431 | 239 | 159 | 4 | 80 | 295 | 23 | 260 | 2.86e-11 | 64.7 |
| Msa1030760 | AT5G48970.2 | 25.373 | 201 | 120 | 6 | 75 | 249 | 61 | 257 | 1.32e-11 | 64.7 |
| Msa1030760 | AT4G01100.3 | 25.571 | 219 | 149 | 6 | 88 | 295 | 1 | 216 | 3.67e-11 | 63.9 |
| Msa1030760 | AT4G32400.1 | 28.261 | 184 | 117 | 4 | 72 | 249 | 205 | 379 | 4.19e-11 | 64.3 |
| Msa1030760 | AT1G07030.1 | 27.374 | 179 | 120 | 4 | 74 | 249 | 36 | 207 | 8.33e-11 | 63.2 |
| Msa1030760 | AT2G47490.1 | 27.174 | 184 | 122 | 5 | 91 | 265 | 129 | 309 | 8.38e-11 | 62.8 |
Find 147 sgRNAs with CRISPR-Local
Find 241 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTCCGACTTGACAAATTT+TGG | 0.064803 | 7_1:+64985635 | None:intergenic |
| GCACAGGGTGCTTGCAAATT+TGG | 0.141897 | 7_1:-64985854 | Msa1030760:CDS |
| AGCACTCCTCTGTTTATTTA+TGG | 0.158551 | 7_1:+64984046 | None:intergenic |
| CCTTTGCTGCACTCATTCTT+TGG | 0.207799 | 7_1:+64984622 | None:intergenic |
| GTAGATCAAGGTCTTGTATT+TGG | 0.240422 | 7_1:+64985775 | None:intergenic |
| AATAACAAATGCAAGAAAAT+TGG | 0.248025 | 7_1:+64983962 | None:intergenic |
| GTGAATAACCGGTAGGGTTT+TGG | 0.271570 | 7_1:+64987257 | None:intergenic |
| CACAGGGTGCTTGCAAATTT+GGG | 0.272981 | 7_1:-64985853 | Msa1030760:CDS |
| ACAAGGGATTAGTGCCTCTA+TGG | 0.295974 | 7_1:-64985481 | Msa1030760:CDS |
| ATCACCAACTGTTGCTCCTT+TGG | 0.305945 | 7_1:+64984498 | None:intergenic |
| GTCAAGTCGGAAGGAGCTTT+GGG | 0.313946 | 7_1:-64985626 | Msa1030760:CDS |
| CTGCACTCATTCTTTGGTTG+TGG | 0.319170 | 7_1:+64984628 | None:intergenic |
| CCTTCTCCTAAGGAACCTTT+TGG | 0.320200 | 7_1:-64987153 | Msa1030760:CDS |
| TGCACTCATTCTTTGGTTGT+GGG | 0.330467 | 7_1:+64984629 | None:intergenic |
| TTCTATGCTGCTTGTACTGC+TGG | 0.334701 | 7_1:-64987105 | Msa1030760:CDS |
| GGCGCGGCGGCGGAAGGAGC+GGG | 0.336833 | 7_1:+64987216 | None:intergenic |
| ACCGAGACCTCTTGCAAAAC+CGG | 0.339551 | 7_1:+64985667 | None:intergenic |
| CCGCCTTCACTCCGTGGAAC+TGG | 0.348054 | 7_1:-64987195 | Msa1030760:CDS |
| TTGTATTTGGCTGCATACTC+AGG | 0.350724 | 7_1:+64985788 | None:intergenic |
| CTATAAATTGTCGTCATTGT+TGG | 0.356180 | 7_1:+64984105 | None:intergenic |
| TGTCAAGTCGGAAGGAGCTT+TGG | 0.366299 | 7_1:-64985627 | Msa1030760:CDS |
| TTTGCTGGTGGATACATTGC+TGG | 0.369619 | 7_1:-64984580 | Msa1030760:CDS |
| CGGCGCGGCGGCGGAAGGAG+CGG | 0.370068 | 7_1:+64987215 | None:intergenic |
| GTTCAAGGAGCAGGGAGTTA+AGG | 0.373432 | 7_1:-64985918 | Msa1030760:CDS |
| CGTTGCACTTTGCCCATTCG+AGG | 0.378339 | 7_1:-64985717 | Msa1030760:CDS |
| TTCAAGGAGCAGGGAGTTAA+GGG | 0.378873 | 7_1:-64985917 | Msa1030760:CDS |
| TCCTTTGCAATCTCTGCAAC+GGG | 0.381681 | 7_1:+64984137 | None:intergenic |
| ATAGTTTGCTTAAGAAACTT+AGG | 0.383933 | 7_1:-64984086 | Msa1030760:three_prime_UTR |
| ACTTAGGAAACCAGCGAATA+GGG | 0.387534 | 7_1:-64984070 | Msa1030760:three_prime_UTR |
| CCTCTCCGTATTGTTATGAT+TGG | 0.392836 | 7_1:-64984331 | Msa1030760:CDS |
| GCAATCTCTGCAACGGGAGC+AGG | 0.392961 | 7_1:+64984143 | None:intergenic |
| GTTATGATTGGAACACTTAC+CGG | 0.392999 | 7_1:-64984319 | Msa1030760:CDS |
| GGCGGCGGAAGGAGCGGGAC+CGG | 0.404628 | 7_1:+64987221 | None:intergenic |
| ATTCCGGATGAAAATTAATC+AGG | 0.416921 | 7_1:+64983745 | None:intergenic |
| ATGCAGGCTGTTGCGAAGTT+TGG | 0.417122 | 7_1:-64984382 | Msa1030760:intron |
| CTGACGATCTGGTGAATAAC+CGG | 0.417433 | 7_1:+64987246 | None:intergenic |
| AAGTACAAGAGCATCTCATC+AGG | 0.418546 | 7_1:-64985953 | Msa1030760:CDS |
| GATGCTTTCAAAGTCTTTGT+GGG | 0.421116 | 7_1:-64984277 | Msa1030760:CDS |
| TGGTGCAAAAGCAAAAGAAT+TGG | 0.421691 | 7_1:-64987418 | Msa1030760:five_prime_UTR |
| AACTTAGGAAACCAGCGAAT+AGG | 0.424333 | 7_1:-64984071 | Msa1030760:three_prime_UTR |
| TATTTATGGTCCCTATTCGC+TGG | 0.424921 | 7_1:+64984060 | None:intergenic |
| TGATGCTTTCAAAGTCTTTG+TGG | 0.429250 | 7_1:-64984278 | Msa1030760:CDS |
| TTTGCAAGAGGTCTCGGTGA+TGG | 0.431090 | 7_1:-64985662 | Msa1030760:CDS |
| ATTCACCAGATCGTCAGTTC+CGG | 0.433147 | 7_1:-64987240 | Msa1030760:CDS |
| AAGACCTTGATCTACCTTGC+TGG | 0.435876 | 7_1:-64985767 | Msa1030760:CDS |
| AAGTACTATTCTGATATTGC+TGG | 0.438339 | 7_1:-64985812 | Msa1030760:CDS |
| GAGATGCTCTTGTACTTGGC+AGG | 0.444922 | 7_1:+64985959 | None:intergenic |
| CTTGAGTTCTCAAGCATGGT+TGG | 0.445500 | 7_1:-64984016 | Msa1030760:three_prime_UTR |
| TCACTCCGTGGAACTGGATC+CGG | 0.455713 | 7_1:-64987189 | Msa1030760:CDS |
| TTGCAAGAGGTCTCGGTGAT+GGG | 0.455885 | 7_1:-64985661 | Msa1030760:CDS |
| AAGAGCATCTCATCAGGGTT+TGG | 0.458213 | 7_1:-64985947 | Msa1030760:CDS |
| GAGTGAAGGCGGCGCGGCGG+CGG | 0.460339 | 7_1:+64987206 | None:intergenic |
| CTCATTCTTTGGTTGTGGGA+TGG | 0.461022 | 7_1:+64984633 | None:intergenic |
| GAAGGCGGCGCGGCGGCGGA+AGG | 0.466553 | 7_1:+64987210 | None:intergenic |
| TGATGAGATGCTCTTGTACT+TGG | 0.466999 | 7_1:+64985955 | None:intergenic |
| ATCTTGCCAAAAGGTTCCTT+AGG | 0.467490 | 7_1:+64987147 | None:intergenic |
| GGATGGGTCCCTACATTACT+TGG | 0.467879 | 7_1:-64985884 | Msa1030760:CDS |
| CACTACACGCCTCTGTCAAA+AGG | 0.475676 | 7_1:-64983851 | Msa1030760:three_prime_UTR |
| TTCCTTTGCAATCTCTGCAA+CGG | 0.481654 | 7_1:+64984136 | None:intergenic |
| CGGGACCGGAACTGACGATC+TGG | 0.489410 | 7_1:+64987235 | None:intergenic |
| CAAGGGATTAGTGCCTCTAT+GGG | 0.492057 | 7_1:-64985480 | Msa1030760:CDS |
| GGTGCAAAAGCAAAAGAATT+GGG | 0.494159 | 7_1:-64987417 | Msa1030760:five_prime_UTR |
| TTATGATTGCAGGCTGTACA+AGG | 0.497538 | 7_1:-64985498 | Msa1030760:intron |
| CTCAACAATGGTCTCAAAAG+AGG | 0.497947 | 7_1:+64984672 | None:intergenic |
| ATTCATGATTCCTTCTCCTA+AGG | 0.502454 | 7_1:-64987163 | Msa1030760:CDS |
| ATATATTCCCCACTGGGCTC+CGG | 0.504355 | 7_1:+64984300 | None:intergenic |
| CCAAAGAATGAGTGCAGCAA+AGG | 0.506478 | 7_1:-64984622 | Msa1030760:CDS |
| TTGCTGAAAACTTCGTAGCT+AGG | 0.507807 | 7_1:-64983900 | Msa1030760:three_prime_UTR |
| GTTGCGAAGTTTGGTGTGGT+TGG | 0.508050 | 7_1:-64984373 | Msa1030760:CDS |
| ATTACTTGGTTACAGTGCAC+AGG | 0.515158 | 7_1:-64985870 | Msa1030760:CDS |
| ATGATTCCTTCATTTCTCTA+CGG | 0.518236 | 7_1:-64987288 | Msa1030760:CDS |
| TTGTTGTCTATGCATAAGCA+TGG | 0.519073 | 7_1:-64983814 | Msa1030760:three_prime_UTR |
| TTCTTCCACCAAAACCCTAC+CGG | 0.523169 | 7_1:-64987265 | Msa1030760:CDS |
| AAAGAGACAAGGTTATCAGC+AGG | 0.524035 | 7_1:+64984532 | None:intergenic |
| ATGAAGGAATCATGTTTCTA+CGG | 0.525899 | 7_1:+64987298 | None:intergenic |
| TACATCTCGATCTTGCCAAA+AGG | 0.527813 | 7_1:+64987138 | None:intergenic |
| CTTAGTCAAGTGTAATATGC+AGG | 0.531917 | 7_1:-64987034 | Msa1030760:intron |
| GGGAGCAGGAGCAGCACCAC+CGG | 0.532666 | 7_1:+64984157 | None:intergenic |
| GCACTGTAACCAAGTAATGT+AGG | 0.533624 | 7_1:+64985875 | None:intergenic |
| CCAAAAGGTTCCTTAGGAGA+AGG | 0.534266 | 7_1:+64987153 | None:intergenic |
| GAAGAACCGTAGAGAAATGA+AGG | 0.537076 | 7_1:+64987282 | None:intergenic |
| GGACTTTAACAGCCTCGAAT+GGG | 0.537558 | 7_1:+64985705 | None:intergenic |
| TGTATTTGGCTGCATACTCA+GGG | 0.537672 | 7_1:+64985789 | None:intergenic |
| GTACAAGCAGCATAGAAAGC+AGG | 0.538163 | 7_1:+64987111 | None:intergenic |
| AAGCATCATATATTCCCCAC+TGG | 0.538260 | 7_1:+64984293 | None:intergenic |
| AACACTTACCGGAGCCCAGT+GGG | 0.541109 | 7_1:-64984308 | Msa1030760:CDS |
| TATGCTGCTTGTACTGCTGG+TGG | 0.545880 | 7_1:-64987102 | Msa1030760:CDS |
| CAAAGAATGAGTGCAGCAAA+GGG | 0.546393 | 7_1:-64984621 | Msa1030760:CDS |
| GGAGCAGCACCACCGGTGGT+TGG | 0.548064 | 7_1:+64984164 | None:intergenic |
| CACTGTAACCAAGTAATGTA+GGG | 0.552514 | 7_1:+64985876 | None:intergenic |
| CCAAAATTTGTCAAGTCGGA+AGG | 0.555895 | 7_1:-64985635 | Msa1030760:CDS |
| CCGAGACCTCTTGCAAAACC+GGG | 0.555939 | 7_1:+64985668 | None:intergenic |
| CGGACTTTAACAGCCTCGAA+TGG | 0.556736 | 7_1:+64985704 | None:intergenic |
| GTTGCTTGAGTTCTCAAGCA+TGG | 0.562493 | 7_1:-64984020 | Msa1030760:three_prime_UTR |
| TGCTGGTTCAGCATCTGCTG+AGG | 0.562706 | 7_1:-64985750 | Msa1030760:CDS |
| AGAAGGAATCATGAATCTAC+CGG | 0.563282 | 7_1:+64987170 | None:intergenic |
| TGCAGCAAAGGGCTGCAACT+TGG | 0.564769 | 7_1:-64984610 | Msa1030760:CDS |
| GTCCGTGTTCAAACTCAGCC+CGG | 0.566951 | 7_1:-64985686 | Msa1030760:CDS |
| CTTATAGATTTGCTCAACAA+TGG | 0.571646 | 7_1:+64984660 | None:intergenic |
| AATTGTAGAAACAAAGTGAT+TGG | 0.571756 | 7_1:-64987438 | None:intergenic |
| AGCAAAATGAAATGCGAGAG+AGG | 0.572437 | 7_1:+64987380 | None:intergenic |
| GTGTTCCAATCATAACAATA+CGG | 0.581864 | 7_1:+64984326 | None:intergenic |
| GATCCAGTTCCACGGAGTGA+AGG | 0.581952 | 7_1:+64987192 | None:intergenic |
| ATATTTGTTAGGCCAACCAC+CGG | 0.583287 | 7_1:-64984176 | Msa1030760:intron |
| TGAACCAGCAAGGTAGATCA+AGG | 0.583686 | 7_1:+64985763 | None:intergenic |
| TGTTGTCTATGCATAAGCAT+GGG | 0.584430 | 7_1:-64983813 | Msa1030760:three_prime_UTR |
| ATGCTTTCAAAGTCTTTGTG+GGG | 0.587996 | 7_1:-64984276 | Msa1030760:CDS |
| AGCATCATATATTCCCCACT+GGG | 0.588188 | 7_1:+64984294 | None:intergenic |
| CGTTGTTCAGAAAAGAGACA+AGG | 0.592020 | 7_1:+64984521 | None:intergenic |
| GGAATCTGCCTTCCCCATAG+AGG | 0.592926 | 7_1:+64985467 | None:intergenic |
| CGATCTGGTGAATAACCGGT+AGG | 0.594124 | 7_1:+64987250 | None:intergenic |
| AAATGAAATGCGAGAGAGGA+GGG | 0.594287 | 7_1:+64987384 | None:intergenic |
| AATACGGAGAGGGAGACCTC+TGG | 0.599896 | 7_1:+64984342 | None:intergenic |
| GAACGAATTCTCTCTCGCAA+TGG | 0.601158 | 7_1:-64987343 | Msa1030760:exon |
| GTGGTTGGTCTCTTCACCAG+AGG | 0.608443 | 7_1:-64984358 | Msa1030760:CDS |
| TTAATGAAAGAAGAATAGCT+TGG | 0.611407 | 7_1:+64983649 | None:intergenic |
| GGCTGTTGCGAAGTTTGGTG+TGG | 0.612493 | 7_1:-64984377 | Msa1030760:CDS |
| GATTAGTGCCTCTATGGGGA+AGG | 0.612930 | 7_1:-64985475 | Msa1030760:CDS |
| CCAGTTCCACGGAGTGAAGG+CGG | 0.613356 | 7_1:+64987195 | None:intergenic |
| AACGCCAAAGGAGCAACAGT+TGG | 0.613664 | 7_1:-64984502 | Msa1030760:CDS |
| GCTGGTGGAATTCTTAGCTG+TGG | 0.615544 | 7_1:-64987087 | Msa1030760:CDS |
| ACGGAGTGAAGGCGGCGCGG+CGG | 0.615971 | 7_1:+64987203 | None:intergenic |
| GCTCCCAAAATTTGTCAAGT+CGG | 0.621493 | 7_1:-64985639 | Msa1030760:CDS |
| AGATGCTCTTGTACTTGGCA+GGG | 0.621873 | 7_1:+64985960 | None:intergenic |
| AGCAGGAGCAGCACCACCGG+TGG | 0.623944 | 7_1:+64984160 | None:intergenic |
| CAATCATAACAATACGGAGA+GGG | 0.625979 | 7_1:+64984332 | None:intergenic |
| TCAAGTCGGAAGGAGCTTTG+GGG | 0.630516 | 7_1:-64985625 | Msa1030760:intron |
| TTACACTTGACTAAGTCAAG+AGG | 0.631255 | 7_1:+64987042 | None:intergenic |
| TTACTTGGTTACAGTGCACA+GGG | 0.631543 | 7_1:-64985869 | Msa1030760:CDS |
| TCCCGTTGCAGAGATTGCAA+AGG | 0.642017 | 7_1:-64984138 | Msa1030760:CDS |
| CAGCAGATGCTGAACCAGCA+AGG | 0.642348 | 7_1:+64985753 | None:intergenic |
| ATCTACCGGATCCAGTTCCA+CGG | 0.647055 | 7_1:+64987184 | None:intergenic |
| GATCTGGTGAATAACCGGTA+GGG | 0.649771 | 7_1:+64987251 | None:intergenic |
| TATGATTGCAGGCTGTACAA+GGG | 0.654041 | 7_1:-64985497 | Msa1030760:intron |
| TCCACGGAGTGAAGGCGGCG+CGG | 0.654298 | 7_1:+64987200 | None:intergenic |
| TGTCTATGCATAAGCATGGG+TGG | 0.661496 | 7_1:-64983810 | Msa1030760:three_prime_UTR |
| TTTGTTAGGCCAACCACCGG+TGG | 0.668876 | 7_1:-64984173 | Msa1030760:intron |
| AACCGGGCTGAGTTTGAACA+CGG | 0.669826 | 7_1:+64985684 | None:intergenic |
| AGTACAAGAGCATCTCATCA+GGG | 0.671144 | 7_1:-64985952 | Msa1030760:CDS |
| AAAATGAAATGCGAGAGAGG+AGG | 0.671379 | 7_1:+64987383 | None:intergenic |
| AAATAAACAGAGGAGTGCTG+AGG | 0.681529 | 7_1:-64984042 | Msa1030760:three_prime_UTR |
| GTAATGTAGGGACCCATCCG+CGG | 0.692836 | 7_1:+64985888 | None:intergenic |
| GAACACTTACCGGAGCCCAG+TGG | 0.694776 | 7_1:-64984309 | Msa1030760:CDS |
| TAGGGACCATAAATAAACAG+AGG | 0.701316 | 7_1:-64984052 | Msa1030760:three_prime_UTR |
| AAGGGATTAGTGCCTCTATG+GGG | 0.721830 | 7_1:-64985479 | Msa1030760:CDS |
| ACACTTACCGGAGCCCAGTG+GGG | 0.735878 | 7_1:-64984307 | Msa1030760:CDS |
| CCAATCATAACAATACGGAG+AGG | 0.738908 | 7_1:+64984331 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAAAAAAAAATAACAAAAA+AGG | + | chr7_1:64986136-64986155 | None:intergenic | 10.0% |
| !!! | AATTTTTTGTTATATTTGTT+AGG | - | chr7_1:64986888-64986907 | Msa1030760:intron | 10.0% |
| !! | AAAATAACAAAAAAGGATTA+TGG | + | chr7_1:64986129-64986148 | None:intergenic | 15.0% |
| !!! | GCATTTGTTATTTTAAATTT+TGG | - | chr7_1:64987124-64987143 | Msa1030760:CDS | 15.0% |
| !!! | TTGTTATTTTAAATTTTGGT+AGG | - | chr7_1:64987128-64987147 | Msa1030760:CDS | 15.0% |
| !! | ACTAATAAAATCGAAATTCT+AGG | + | chr7_1:64984319-64984338 | None:intergenic | 20.0% |
| !! | TGTGATGAAATATTCATATT+TGG | - | chr7_1:64984462-64984481 | Msa1030760:intron | 20.0% |
| !! | TGTTGAAGATTATTCATATT+TGG | - | chr7_1:64984727-64984746 | Msa1030760:intron | 20.0% |
| !! | TTTGTAATAAATAGCATTTG+CGG | + | chr7_1:64984900-64984919 | None:intergenic | 20.0% |
| !! | AATTACTAGTATTGTTAAAC+TGG | - | chr7_1:64984999-64985018 | Msa1030760:intron | 20.0% |
| !! | ACTAAATATATTATGATTGC+AGG | - | chr7_1:64985567-64985586 | Msa1030760:intron | 20.0% |
| !! | GCTGTTAAAATTTATCATTT+AGG | - | chr7_1:64985874-64985893 | Msa1030760:CDS | 20.0% |
| !!! | TTTTAGAAAATTCATTCAAG+AGG | - | chr7_1:64985923-64985942 | Msa1030760:CDS | 20.0% |
| !!! | TGATATATTTGTTCTAAAGT+GGG | - | chr7_1:64986849-64986868 | Msa1030760:intron | 20.0% |
| !! | AATAACAAATGCAAGAAAAT+TGG | + | chr7_1:64987116-64987135 | None:intergenic | 20.0% |
| !!! | TATTTTAAATTTTGGTAGGA+TGG | - | chr7_1:64987132-64987151 | Msa1030760:CDS | 20.0% |
| !!! | TTTTAACAACAAAAACATTC+CGG | + | chr7_1:64987349-64987368 | None:intergenic | 20.0% |
| !!! | GCGATTTATGTTTGATTTTA+AGG | - | chr7_1:64984118-64984137 | Msa1030760:exon | 25.0% |
| ! | TGAATGTTGTTGAATTGTTA+TGG | - | chr7_1:64984193-64984212 | Msa1030760:intron | 25.0% |
| !!! | TGATTGTGATACTGTTATTT+TGG | - | chr7_1:64984225-64984244 | Msa1030760:intron | 25.0% |
| !!! | TTTGTTTTTTGTTGATCTAG+CGG | - | chr7_1:64984403-64984422 | Msa1030760:intron | 25.0% |
| !!! | TTGTAGTTTTTAATTACCAC+TGG | + | chr7_1:64984605-64984624 | None:intergenic | 25.0% |
| ! | ATGAATAATCTTCAACACAA+TGG | + | chr7_1:64984724-64984743 | None:intergenic | 25.0% |
| !! | TTATATCCTTGACAAACTTT+TGG | + | chr7_1:64985952-64985971 | None:intergenic | 25.0% |
| ! | CTAAAGACATTCAAAAGAAT+GGG | + | chr7_1:64985980-64985999 | None:intergenic | 25.0% |
| ! | TCTAAAGACATTCAAAAGAA+TGG | + | chr7_1:64985981-64986000 | None:intergenic | 25.0% |
| ! | TAGAAGATATATGAGTAAGT+AGG | + | chr7_1:64986163-64986182 | None:intergenic | 25.0% |
| ! | AATAGGAAGATAACTTATGA+TGG | - | chr7_1:64986300-64986319 | Msa1030760:intron | 25.0% |
| !!! | GTTTTACATGTCTTATTATC+AGG | + | chr7_1:64986343-64986362 | None:intergenic | 25.0% |
| !!! | GTGATATATTTGTTCTAAAG+TGG | - | chr7_1:64986848-64986867 | Msa1030760:intron | 25.0% |
| !!! | ATAGTTTGCTTAAGAAACTT+AGG | - | chr7_1:64986989-64987008 | Msa1030760:intron | 25.0% |
| !! | ATGATATAATTTTGCGTGTT+AGG | - | chr7_1:64987199-64987218 | Msa1030760:CDS | 25.0% |
| !! | TGATATAATTTTGCGTGTTA+GGG | - | chr7_1:64987200-64987219 | Msa1030760:CDS | 25.0% |
| !! | TTACCTGATTAATTTTCATC+CGG | - | chr7_1:64987327-64987346 | Msa1030760:CDS | 25.0% |
| ! | TTAATGAAAGAAGAATAGCT+TGG | + | chr7_1:64987429-64987448 | None:intergenic | 25.0% |
| ! | ATGAAGGAATCATGTTTCTA+CGG | + | chr7_1:64983780-64983799 | None:intergenic | 30.0% |
| ATGATTCCTTCATTTCTCTA+CGG | - | chr7_1:64983787-64983806 | Msa1030760:three_prime_UTR | 30.0% | |
| !! | GGTGTTTATTTGATTTGTGA+TGG | - | chr7_1:64984139-64984158 | Msa1030760:CDS | 30.0% |
| ! | TAGATCTGAGAAATGCTTTT+AGG | - | chr7_1:64984164-64984183 | Msa1030760:CDS | 30.0% |
| !! | CTTGTTGTATGTTAAGTTGA+AGG | - | chr7_1:64984275-64984294 | Msa1030760:CDS | 30.0% |
| !! | AGTCTGTTGATATTTTGAGT+AGG | - | chr7_1:64984432-64984451 | Msa1030760:intron | 30.0% |
| CAAAATCTCAACAGAGTAAA+AGG | + | chr7_1:64984680-64984699 | None:intergenic | 30.0% | |
| ! | AGATTCAGCAATTTAAGACT+AGG | + | chr7_1:64984938-64984957 | None:intergenic | 30.0% |
| TAGGATTGGAATTGTTTAGT+TGG | - | chr7_1:64985037-64985056 | Msa1030760:intron | 30.0% | |
| AAGTACTATTCTGATATTGC+TGG | - | chr7_1:64985263-64985282 | Msa1030760:intron | 30.0% | |
| CTTCAAATGTAGAACTTACA+TGG | + | chr7_1:64985632-64985651 | None:intergenic | 30.0% | |
| CAAAAAAATGATGTGCAAAC+TGG | + | chr7_1:64985750-64985769 | None:intergenic | 30.0% | |
| ACAGCAAAAATATCAACAGA+CGG | + | chr7_1:64985859-64985878 | None:intergenic | 30.0% | |
| TAAAACTCATAAGTAGAAGC+AGG | + | chr7_1:64985908-64985927 | None:intergenic | 30.0% | |
| TAACAAGACATTCTTAGTGT+AGG | - | chr7_1:64986058-64986077 | Msa1030760:intron | 30.0% | |
| TGAGAAATGATGAAACTCAT+TGG | - | chr7_1:64986199-64986218 | Msa1030760:intron | 30.0% | |
| CTCATTGGTATGAATATTGA+TGG | - | chr7_1:64986214-64986233 | Msa1030760:intron | 30.0% | |
| TGTCATTATGTGTTACGAAT+AGG | - | chr7_1:64986283-64986302 | Msa1030760:intron | 30.0% | |
| ! | ATAACTTATGATGGAACCTA+AGG | - | chr7_1:64986309-64986328 | Msa1030760:intron | 30.0% |
| ! | TAACTTATGATGGAACCTAA+GGG | - | chr7_1:64986310-64986329 | Msa1030760:intron | 30.0% |
| ! | CTTATAGATTTGCTCAACAA+TGG | + | chr7_1:64986418-64986437 | None:intergenic | 30.0% |
| GTGTTCCAATCATAACAATA+CGG | + | chr7_1:64986752-64986771 | None:intergenic | 30.0% | |
| CTATAAATTGTCGTCATTGT+TGG | + | chr7_1:64986973-64986992 | None:intergenic | 30.0% | |
| AGAAAAATTGATCTCAATCG+AGG | + | chr7_1:64987301-64987320 | None:intergenic | 30.0% | |
| ATTCCGGATGAAAATTAATC+AGG | + | chr7_1:64987333-64987352 | None:intergenic | 30.0% | |
| TGGTGCAAAAGCAAAAGAAT+TGG | - | chr7_1:64983657-64983676 | Msa1030760:three_prime_UTR | 35.0% | |
| GGTGCAAAAGCAAAAGAATT+GGG | - | chr7_1:64983658-64983677 | Msa1030760:three_prime_UTR | 35.0% | |
| AGAAGGAATCATGAATCTAC+CGG | + | chr7_1:64983908-64983927 | None:intergenic | 35.0% | |
| ATTCATGATTCCTTCTCCTA+AGG | - | chr7_1:64983912-64983931 | Msa1030760:three_prime_UTR | 35.0% | |
| TTACACTTGACTAAGTCAAG+AGG | + | chr7_1:64984036-64984055 | None:intergenic | 35.0% | |
| CTTAGTCAAGTGTAATATGC+AGG | - | chr7_1:64984041-64984060 | Msa1030760:three_prime_UTR | 35.0% | |
| ! | GCTTTTCTTCTTCGTTTTCT+TGG | - | chr7_1:64984068-64984087 | Msa1030760:three_prime_UTR | 35.0% |
| AAGTTGAAGGATCGTTTGAT+TGG | - | chr7_1:64984288-64984307 | Msa1030760:CDS | 35.0% | |
| AAGGCAGCTAGAATAACAAA+AGG | + | chr7_1:64984661-64984680 | None:intergenic | 35.0% | |
| TGTTAAACTGGTTGTGTTCT+TGG | - | chr7_1:64985011-64985030 | Msa1030760:intron | 35.0% | |
| CACTGTAACCAAGTAATGTA+GGG | + | chr7_1:64985202-64985221 | None:intergenic | 35.0% | |
| ! | GTAGATCAAGGTCTTGTATT+TGG | + | chr7_1:64985303-64985322 | None:intergenic | 35.0% |
| !! | CTTCCGACTTGACAAATTTT+GGG | + | chr7_1:64985442-64985461 | None:intergenic | 35.0% |
| CTTGATCTATGCTAGGAATT+AGG | - | chr7_1:64985534-64985553 | Msa1030760:intron | 35.0% | |
| ATCTATGCTAGGAATTAGGA+TGG | - | chr7_1:64985538-64985557 | Msa1030760:intron | 35.0% | |
| TCTATGCTAGGAATTAGGAT+GGG | - | chr7_1:64985539-64985558 | Msa1030760:intron | 35.0% | |
| !! | AATTGACTTGAAGTCCAACA+AGG | + | chr7_1:64985821-64985840 | None:intergenic | 35.0% |
| ! | AACTTATGATGGAACCTAAG+GGG | - | chr7_1:64986311-64986330 | Msa1030760:intron | 35.0% |
| TGTTATCTACTGTTTGATGC+AGG | - | chr7_1:64986677-64986696 | Msa1030760:intron | 35.0% | |
| CAATCATAACAATACGGAGA+GGG | + | chr7_1:64986746-64986765 | None:intergenic | 35.0% | |
| GTTATGATTGGAACACTTAC+CGG | - | chr7_1:64986756-64986775 | Msa1030760:intron | 35.0% | |
| TGATGCTTTCAAAGTCTTTG+TGG | - | chr7_1:64986797-64986816 | Msa1030760:intron | 35.0% | |
| GATGCTTTCAAAGTCTTTGT+GGG | - | chr7_1:64986798-64986817 | Msa1030760:intron | 35.0% | |
| ATGCTTTCAAAGTCTTTGTG+GGG | - | chr7_1:64986799-64986818 | Msa1030760:intron | 35.0% | |
| TAGGGACCATAAATAAACAG+AGG | - | chr7_1:64987023-64987042 | Msa1030760:intron | 35.0% | |
| AGCACTCCTCTGTTTATTTA+TGG | + | chr7_1:64987032-64987051 | None:intergenic | 35.0% | |
| ! | ATGTGTATTCCTTTTGACAG+AGG | + | chr7_1:64987236-64987255 | None:intergenic | 35.0% |
| TTGTTGTCTATGCATAAGCA+TGG | - | chr7_1:64987261-64987280 | Msa1030760:CDS | 35.0% | |
| TGTTGTCTATGCATAAGCAT+GGG | - | chr7_1:64987262-64987281 | Msa1030760:CDS | 35.0% | |
| AAATGAAATGCGAGAGAGGA+GGG | + | chr7_1:64983694-64983713 | None:intergenic | 40.0% | |
| AAAATGAAATGCGAGAGAGG+AGG | + | chr7_1:64983695-64983714 | None:intergenic | 40.0% | |
| AGCAAAATGAAATGCGAGAG+AGG | + | chr7_1:64983698-64983717 | None:intergenic | 40.0% | |
| GAAGAACCGTAGAGAAATGA+AGG | + | chr7_1:64983796-64983815 | None:intergenic | 40.0% | |
| ATCTTGCCAAAAGGTTCCTT+AGG | + | chr7_1:64983931-64983950 | None:intergenic | 40.0% | |
| TACATCTCGATCTTGCCAAA+AGG | + | chr7_1:64983940-64983959 | None:intergenic | 40.0% | |
| ! | CTTCTTCGTTTTCTTGGATC+TGG | - | chr7_1:64984074-64984093 | Msa1030760:three_prime_UTR | 40.0% |
| TAGTTATGAAACACAGCCAC+CGG | - | chr7_1:64984551-64984570 | Msa1030760:CDS | 40.0% | |
| !! | TGTGTTCTTGGTGTTAGGAT+TGG | - | chr7_1:64985023-64985042 | Msa1030760:intron | 40.0% |
| TGATGAGATGCTCTTGTACT+TGG | + | chr7_1:64985123-64985142 | None:intergenic | 40.0% | |
| !! | AAGTACAAGAGCATCTCATC+AGG | - | chr7_1:64985122-64985141 | Msa1030760:intron | 40.0% |
| !! | AGTACAAGAGCATCTCATCA+GGG | - | chr7_1:64985123-64985142 | Msa1030760:intron | 40.0% |
| !!! | AGGGTTTGGAGTTTTGTTCA+AGG | - | chr7_1:64985142-64985161 | Msa1030760:intron | 40.0% |
| GCACTGTAACCAAGTAATGT+AGG | + | chr7_1:64985203-64985222 | None:intergenic | 40.0% | |
| ATTACTTGGTTACAGTGCAC+AGG | - | chr7_1:64985205-64985224 | Msa1030760:intron | 40.0% | |
| TTACTTGGTTACAGTGCACA+GGG | - | chr7_1:64985206-64985225 | Msa1030760:intron | 40.0% | |
| TGTATTTGGCTGCATACTCA+GGG | + | chr7_1:64985289-64985308 | None:intergenic | 40.0% | |
| TTGTATTTGGCTGCATACTC+AGG | + | chr7_1:64985290-64985309 | None:intergenic | 40.0% | |
| GCTCCCAAAATTTGTCAAGT+CGG | - | chr7_1:64985436-64985455 | Msa1030760:intron | 40.0% | |
| !! | CCTTCCGACTTGACAAATTT+TGG | + | chr7_1:64985443-64985462 | None:intergenic | 40.0% |
| CCAAAATTTGTCAAGTCGGA+AGG | - | chr7_1:64985440-64985459 | Msa1030760:intron | 40.0% | |
| TGTTGCTCTTGATCTATGCT+AGG | - | chr7_1:64985527-64985546 | Msa1030760:intron | 40.0% | |
| TTATGATTGCAGGCTGTACA+AGG | - | chr7_1:64985577-64985596 | Msa1030760:intron | 40.0% | |
| TATGATTGCAGGCTGTACAA+GGG | - | chr7_1:64985578-64985597 | Msa1030760:intron | 40.0% | |
| GCAATATCCTTCTTGTTGAC+TGG | - | chr7_1:64985672-64985691 | Msa1030760:CDS | 40.0% | |
| ! | AAAGTGTCCAGTCAACAAGA+AGG | + | chr7_1:64985682-64985701 | None:intergenic | 40.0% |
| AGGAAGCCAAAAGTTTGTCA+AGG | - | chr7_1:64985943-64985962 | Msa1030760:CDS | 40.0% | |
| TTATCAGGTTTCAACCCCTT+AGG | + | chr7_1:64986328-64986347 | None:intergenic | 40.0% | |
| CTCAACAATGGTCTCAAAAG+AGG | + | chr7_1:64986406-64986425 | None:intergenic | 40.0% | |
| TGCACTCATTCTTTGGTTGT+GGG | + | chr7_1:64986449-64986468 | None:intergenic | 40.0% | |
| CAAAGAATGAGTGCAGCAAA+GGG | - | chr7_1:64986454-64986473 | Msa1030760:intron | 40.0% | |
| AAAGAGACAAGGTTATCAGC+AGG | + | chr7_1:64986546-64986565 | None:intergenic | 40.0% | |
| CGTTGTTCAGAAAAGAGACA+AGG | + | chr7_1:64986557-64986576 | None:intergenic | 40.0% | |
| ! | TCTTTTCTGAACAACGCCAA+AGG | - | chr7_1:64986561-64986580 | Msa1030760:intron | 40.0% |
| CCAATCATAACAATACGGAG+AGG | + | chr7_1:64986747-64986766 | None:intergenic | 40.0% | |
| CCTCTCCGTATTGTTATGAT+TGG | - | chr7_1:64986744-64986763 | Msa1030760:intron | 40.0% | |
| AGCATCATATATTCCCCACT+GGG | + | chr7_1:64986784-64986803 | None:intergenic | 40.0% | |
| AAGCATCATATATTCCCCAC+TGG | + | chr7_1:64986785-64986804 | None:intergenic | 40.0% | |
| ! | ATATTTGTTAGGCCAACCAC+CGG | - | chr7_1:64986899-64986918 | Msa1030760:intron | 40.0% |
| TTCCTTTGCAATCTCTGCAA+CGG | + | chr7_1:64986942-64986961 | None:intergenic | 40.0% | |
| AACTTAGGAAACCAGCGAAT+AGG | - | chr7_1:64987004-64987023 | Msa1030760:intron | 40.0% | |
| ACTTAGGAAACCAGCGAATA+GGG | - | chr7_1:64987005-64987024 | Msa1030760:intron | 40.0% | |
| TATTTATGGTCCCTATTCGC+TGG | + | chr7_1:64987018-64987037 | None:intergenic | 40.0% | |
| !! | AAATAAACAGAGGAGTGCTG+AGG | - | chr7_1:64987033-64987052 | Msa1030760:intron | 40.0% |
| TTGCTGAAAACTTCGTAGCT+AGG | - | chr7_1:64987175-64987194 | Msa1030760:CDS | 40.0% | |
| GAACGAATTCTCTCTCGCAA+TGG | - | chr7_1:64983732-64983751 | Msa1030760:three_prime_UTR | 45.0% | |
| TTCTTCCACCAAAACCCTAC+CGG | - | chr7_1:64983810-64983829 | Msa1030760:three_prime_UTR | 45.0% | |
| !! | AATAACCGGTAGGGTTTTGG+TGG | + | chr7_1:64983818-64983837 | None:intergenic | 45.0% |
| ! | GTGAATAACCGGTAGGGTTT+TGG | + | chr7_1:64983821-64983840 | None:intergenic | 45.0% |
| GATCTGGTGAATAACCGGTA+GGG | + | chr7_1:64983827-64983846 | None:intergenic | 45.0% | |
| CTGACGATCTGGTGAATAAC+CGG | + | chr7_1:64983832-64983851 | None:intergenic | 45.0% | |
| ATTCACCAGATCGTCAGTTC+CGG | - | chr7_1:64983835-64983854 | Msa1030760:three_prime_UTR | 45.0% | |
| CCAAAAGGTTCCTTAGGAGA+AGG | + | chr7_1:64983925-64983944 | None:intergenic | 45.0% | |
| ! | CCTTCTCCTAAGGAACCTTT+TGG | - | chr7_1:64983922-64983941 | Msa1030760:three_prime_UTR | 45.0% |
| GTACAAGCAGCATAGAAAGC+AGG | + | chr7_1:64983967-64983986 | None:intergenic | 45.0% | |
| ! | TTCTATGCTGCTTGTACTGC+TGG | - | chr7_1:64983970-64983989 | Msa1030760:three_prime_UTR | 45.0% |
| CATTGACACATCAACACCAG+TGG | - | chr7_1:64984586-64984605 | Msa1030760:CDS | 45.0% | |
| !! | CTGGTTGTGTTCTTGGTGTT+AGG | - | chr7_1:64985018-64985037 | Msa1030760:intron | 45.0% |
| AGATGCTCTTGTACTTGGCA+GGG | + | chr7_1:64985118-64985137 | None:intergenic | 45.0% | |
| !! | AAGAGCATCTCATCAGGGTT+TGG | - | chr7_1:64985128-64985147 | Msa1030760:intron | 45.0% |
| !!! | TGGAGTTTTGTTCAAGGAGC+AGG | - | chr7_1:64985148-64985167 | Msa1030760:intron | 45.0% |
| !!! | GGAGTTTTGTTCAAGGAGCA+GGG | - | chr7_1:64985149-64985168 | Msa1030760:intron | 45.0% |
| TTCAAGGAGCAGGGAGTTAA+GGG | - | chr7_1:64985158-64985177 | Msa1030760:intron | 45.0% | |
| ! | CACAGGGTGCTTGCAAATTT+GGG | - | chr7_1:64985222-64985241 | Msa1030760:intron | 45.0% |
| AAGACCTTGATCTACCTTGC+TGG | - | chr7_1:64985308-64985327 | Msa1030760:intron | 45.0% | |
| TGAACCAGCAAGGTAGATCA+AGG | + | chr7_1:64985315-64985334 | None:intergenic | 45.0% | |
| GGACTTTAACAGCCTCGAAT+GGG | + | chr7_1:64985373-64985392 | None:intergenic | 45.0% | |
| ! | ACAAGGGATTAGTGCCTCTA+TGG | - | chr7_1:64985594-64985613 | Msa1030760:intron | 45.0% |
| ! | CAAGGGATTAGTGCCTCTAT+GGG | - | chr7_1:64985595-64985614 | Msa1030760:intron | 45.0% |
| ! | AAGGGATTAGTGCCTCTATG+GGG | - | chr7_1:64985596-64985615 | Msa1030760:intron | 45.0% |
| GTTACTTCCGTTACCATCTG+AGG | - | chr7_1:64985720-64985739 | Msa1030760:CDS | 45.0% | |
| TGGAATGCCTCAGATGGTAA+CGG | + | chr7_1:64985730-64985749 | None:intergenic | 45.0% | |
| GTCATGTTGCACTACCTTGT+TGG | - | chr7_1:64985804-64985823 | Msa1030760:CDS | 45.0% | |
| CTCATTCTTTGGTTGTGGGA+TGG | + | chr7_1:64986445-64986464 | None:intergenic | 45.0% | |
| CTGCACTCATTCTTTGGTTG+TGG | + | chr7_1:64986450-64986469 | None:intergenic | 45.0% | |
| CCTTTGCTGCACTCATTCTT+TGG | + | chr7_1:64986456-64986475 | None:intergenic | 45.0% | |
| CCAAAGAATGAGTGCAGCAA+AGG | - | chr7_1:64986453-64986472 | Msa1030760:intron | 45.0% | |
| !!! | CAACTTGGTGTCAGTTTTGC+TGG | - | chr7_1:64986480-64986499 | Msa1030760:intron | 45.0% |
| ! | TTTGCTGGTGGATACATTGC+TGG | - | chr7_1:64986495-64986514 | Msa1030760:intron | 45.0% |
| ATCACCAACTGTTGCTCCTT+TGG | + | chr7_1:64986580-64986599 | None:intergenic | 45.0% | |
| TCCTTTGCAATCTCTGCAAC+GGG | + | chr7_1:64986941-64986960 | None:intergenic | 45.0% | |
| GTTGCTTGAGTTCTCAAGCA+TGG | - | chr7_1:64987055-64987074 | Msa1030760:CDS | 45.0% | |
| CTTGAGTTCTCAAGCATGGT+TGG | - | chr7_1:64987059-64987078 | Msa1030760:CDS | 45.0% | |
| ! | CGAAGTTTTCAGCAACTGGA+AGG | + | chr7_1:64987170-64987189 | None:intergenic | 45.0% |
| ! | GCTACGAAGTTTTCAGCAAC+TGG | + | chr7_1:64987174-64987193 | None:intergenic | 45.0% |
| TGTCTATGCATAAGCATGGG+TGG | - | chr7_1:64987265-64987284 | Msa1030760:CDS | 45.0% | |
| !! | AATATAACAAAAAATTTATT+AGG | + | chr7_1:64986884-64986903 | None:intergenic | 5.0% |
| CGATCTGGTGAATAACCGGT+AGG | + | chr7_1:64983828-64983847 | None:intergenic | 50.0% | |
| ATCTACCGGATCCAGTTCCA+CGG | + | chr7_1:64983894-64983913 | None:intergenic | 50.0% | |
| ! | TATGCTGCTTGTACTGCTGG+TGG | - | chr7_1:64983973-64983992 | Msa1030760:three_prime_UTR | 50.0% |
| GCTGGTGGAATTCTTAGCTG+TGG | - | chr7_1:64983988-64984007 | Msa1030760:three_prime_UTR | 50.0% | |
| GAGATGCTCTTGTACTTGGC+AGG | + | chr7_1:64985119-64985138 | None:intergenic | 50.0% | |
| GTTCAAGGAGCAGGGAGTTA+AGG | - | chr7_1:64985157-64985176 | Msa1030760:intron | 50.0% | |
| !! | GGAGTTAAGGGCTTTTTCCG+CGG | - | chr7_1:64985170-64985189 | Msa1030760:intron | 50.0% |
| !! | TTAAGGGCTTTTTCCGCGGA+TGG | - | chr7_1:64985174-64985193 | Msa1030760:intron | 50.0% |
| !! | TAAGGGCTTTTTCCGCGGAT+GGG | - | chr7_1:64985175-64985194 | Msa1030760:intron | 50.0% |
| GGATGGGTCCCTACATTACT+TGG | - | chr7_1:64985191-64985210 | Msa1030760:intron | 50.0% | |
| ! | GCACAGGGTGCTTGCAAATT+TGG | - | chr7_1:64985221-64985240 | Msa1030760:intron | 50.0% |
| CGGACTTTAACAGCCTCGAA+TGG | + | chr7_1:64985374-64985393 | None:intergenic | 50.0% | |
| AACCGGGCTGAGTTTGAACA+CGG | + | chr7_1:64985394-64985413 | None:intergenic | 50.0% | |
| ACCGAGACCTCTTGCAAAAC+CGG | + | chr7_1:64985411-64985430 | None:intergenic | 50.0% | |
| TTTGCAAGAGGTCTCGGTGA+TGG | - | chr7_1:64985413-64985432 | Msa1030760:intron | 50.0% | |
| TTGCAAGAGGTCTCGGTGAT+GGG | - | chr7_1:64985414-64985433 | Msa1030760:intron | 50.0% | |
| TGTCAAGTCGGAAGGAGCTT+TGG | - | chr7_1:64985448-64985467 | Msa1030760:intron | 50.0% | |
| GTCAAGTCGGAAGGAGCTTT+GGG | - | chr7_1:64985449-64985468 | Msa1030760:intron | 50.0% | |
| TCAAGTCGGAAGGAGCTTTG+GGG | - | chr7_1:64985450-64985469 | Msa1030760:intron | 50.0% | |
| GATTAGTGCCTCTATGGGGA+AGG | - | chr7_1:64985600-64985619 | Msa1030760:intron | 50.0% | |
| GCAAACTGGAATGCCTCAGA+TGG | + | chr7_1:64985736-64985755 | None:intergenic | 50.0% | |
| !!! | CTTGGTGTCAGTTTTGCTGG+TGG | - | chr7_1:64986483-64986502 | Msa1030760:intron | 50.0% |
| AACGCCAAAGGAGCAACAGT+TGG | - | chr7_1:64986573-64986592 | Msa1030760:intron | 50.0% | |
| ATGCAGGCTGTTGCGAAGTT+TGG | - | chr7_1:64986693-64986712 | Msa1030760:intron | 50.0% | |
| !! | GTTGCGAAGTTTGGTGTGGT+TGG | - | chr7_1:64986702-64986721 | Msa1030760:intron | 50.0% |
| ATATATTCCCCACTGGGCTC+CGG | + | chr7_1:64986778-64986797 | None:intergenic | 50.0% | |
| TCCCGTTGCAGAGATTGCAA+AGG | - | chr7_1:64986937-64986956 | Msa1030760:intron | 50.0% | |
| CACTACACGCCTCTGTCAAA+AGG | - | chr7_1:64987224-64987243 | Msa1030760:CDS | 50.0% | |
| GATCCAGTTCCACGGAGTGA+AGG | + | chr7_1:64983886-64983905 | None:intergenic | 55.0% | |
| TCACTCCGTGGAACTGGATC+CGG | - | chr7_1:64983886-64983905 | Msa1030760:three_prime_UTR | 55.0% | |
| GTCAATGACCGTGTCGTGAC+CGG | + | chr7_1:64984573-64984592 | None:intergenic | 55.0% | |
| GTAATGTAGGGACCCATCCG+CGG | + | chr7_1:64985190-64985209 | None:intergenic | 55.0% | |
| CAGCAGATGCTGAACCAGCA+AGG | + | chr7_1:64985325-64985344 | None:intergenic | 55.0% | |
| !! | TGCTGGTTCAGCATCTGCTG+AGG | - | chr7_1:64985325-64985344 | Msa1030760:intron | 55.0% |
| CGTTGCACTTTGCCCATTCG+AGG | - | chr7_1:64985358-64985377 | Msa1030760:intron | 55.0% | |
| GTCCGTGTTCAAACTCAGCC+CGG | - | chr7_1:64985389-64985408 | Msa1030760:intron | 55.0% | |
| ! | ACTCAGCCCGGTTTTGCAAG+AGG | - | chr7_1:64985401-64985420 | Msa1030760:intron | 55.0% |
| CCGAGACCTCTTGCAAAACC+GGG | + | chr7_1:64985410-64985429 | None:intergenic | 55.0% | |
| ! | CCCGGTTTTGCAAGAGGTCT+CGG | - | chr7_1:64985407-64985426 | Msa1030760:intron | 55.0% |
| GGAATCTGCCTTCCCCATAG+AGG | + | chr7_1:64985611-64985630 | None:intergenic | 55.0% | |
| TGCAGCAAAGGGCTGCAACT+TGG | - | chr7_1:64986465-64986484 | Msa1030760:intron | 55.0% | |
| ! | GGCTGTTGCGAAGTTTGGTG+TGG | - | chr7_1:64986698-64986717 | Msa1030760:intron | 55.0% |
| !! | GTGGTTGGTCTCTTCACCAG+AGG | - | chr7_1:64986717-64986736 | Msa1030760:intron | 55.0% |
| AATACGGAGAGGGAGACCTC+TGG | + | chr7_1:64986736-64986755 | None:intergenic | 55.0% | |
| AACACTTACCGGAGCCCAGT+GGG | - | chr7_1:64986767-64986786 | Msa1030760:intron | 55.0% | |
| TTTGTTAGGCCAACCACCGG+TGG | - | chr7_1:64986902-64986921 | Msa1030760:intron | 55.0% | |
| CCAGTTCCACGGAGTGAAGG+CGG | + | chr7_1:64983883-64983902 | None:intergenic | 60.0% | |
| AATGACCGTGTCGTGACCGG+TGG | + | chr7_1:64984570-64984589 | None:intergenic | 60.0% | |
| GAACACTTACCGGAGCCCAG+TGG | - | chr7_1:64986766-64986785 | Msa1030760:intron | 60.0% | |
| ACACTTACCGGAGCCCAGTG+GGG | - | chr7_1:64986768-64986787 | Msa1030760:intron | 60.0% | |
| GCAATCTCTGCAACGGGAGC+AGG | + | chr7_1:64986935-64986954 | None:intergenic | 60.0% | |
| CGGGACCGGAACTGACGATC+TGG | + | chr7_1:64983843-64983862 | None:intergenic | 65.0% | |
| CCGCCTTCACTCCGTGGAAC+TGG | - | chr7_1:64983880-64983899 | Msa1030760:three_prime_UTR | 65.0% | |
| CACAGCCACCGGTCACGACA+CGG | - | chr7_1:64984562-64984581 | Msa1030760:CDS | 65.0% | |
| TCCACGGAGTGAAGGCGGCG+CGG | + | chr7_1:64983878-64983897 | None:intergenic | 70.0% | |
| GGAGCAGCACCACCGGTGGT+TGG | + | chr7_1:64986914-64986933 | None:intergenic | 70.0% | |
| AGCAGGAGCAGCACCACCGG+TGG | + | chr7_1:64986918-64986937 | None:intergenic | 70.0% | |
| GGGAGCAGGAGCAGCACCAC+CGG | + | chr7_1:64986921-64986940 | None:intergenic | 70.0% | |
| ACGGAGTGAAGGCGGCGCGG+CGG | + | chr7_1:64983875-64983894 | None:intergenic | 75.0% | |
| ! | GGCGGCGGAAGGAGCGGGAC+CGG | + | chr7_1:64983857-64983876 | None:intergenic | 80.0% |
| ! | GAGTGAAGGCGGCGCGGCGG+CGG | + | chr7_1:64983872-64983891 | None:intergenic | 80.0% |
| ! | GCCGCGCCGCCTTCACTCCG+TGG | - | chr7_1:64983874-64983893 | Msa1030760:three_prime_UTR | 80.0% |
| ! | GGCGCGGCGGCGGAAGGAGC+GGG | + | chr7_1:64983862-64983881 | None:intergenic | 85.0% |
| ! | CGGCGCGGCGGCGGAAGGAG+CGG | + | chr7_1:64983863-64983882 | None:intergenic | 85.0% |
| ! | GAAGGCGGCGCGGCGGCGGA+AGG | + | chr7_1:64983868-64983887 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 64983649 | 64987448 | 64983649 | ID=Msa1030760;Name=Msa1030760 |
| chr7_1 | mRNA | 64983649 | 64987448 | 64983649 | ID=Msa1030760-mRNA-1;Parent=Msa1030760;Name=Msa1030760-mRNA-1;_AED=0.07;_eAED=0.07;_QI=102|1|1|1|1|1|6|484|370 |
| chr7_1 | exon | 64983649 | 64984187 | 64983649 | ID=Msa1030760-mRNA-1:exon:14338;Parent=Msa1030760-mRNA-1 |
| chr7_1 | exon | 64984274 | 64984398 | 64984274 | ID=Msa1030760-mRNA-1:exon:14337;Parent=Msa1030760-mRNA-1 |
| chr7_1 | exon | 64984498 | 64984712 | 64984498 | ID=Msa1030760-mRNA-1:exon:14336;Parent=Msa1030760-mRNA-1 |
| chr7_1 | exon | 64985465 | 64985508 | 64985465 | ID=Msa1030760-mRNA-1:exon:14335;Parent=Msa1030760-mRNA-1 |
| chr7_1 | exon | 64985626 | 64985987 | 64985626 | ID=Msa1030760-mRNA-1:exon:14334;Parent=Msa1030760-mRNA-1 |
| chr7_1 | exon | 64987035 | 64987448 | 64987035 | ID=Msa1030760-mRNA-1:exon:14333;Parent=Msa1030760-mRNA-1 |
| chr7_1 | five_prime_UTR | 64987347 | 64987448 | 64987347 | ID=Msa1030760-mRNA-1:five_prime_utr;Parent=Msa1030760-mRNA-1 |
| chr7_1 | CDS | 64987035 | 64987346 | 64987035 | ID=Msa1030760-mRNA-1:cds;Parent=Msa1030760-mRNA-1 |
| chr7_1 | CDS | 64985626 | 64985987 | 64985626 | ID=Msa1030760-mRNA-1:cds;Parent=Msa1030760-mRNA-1 |
| chr7_1 | CDS | 64985465 | 64985508 | 64985465 | ID=Msa1030760-mRNA-1:cds;Parent=Msa1030760-mRNA-1 |
| chr7_1 | CDS | 64984498 | 64984712 | 64984498 | ID=Msa1030760-mRNA-1:cds;Parent=Msa1030760-mRNA-1 |
| chr7_1 | CDS | 64984274 | 64984398 | 64984274 | ID=Msa1030760-mRNA-1:cds;Parent=Msa1030760-mRNA-1 |
| chr7_1 | CDS | 64984133 | 64984187 | 64984133 | ID=Msa1030760-mRNA-1:cds;Parent=Msa1030760-mRNA-1 |
| chr7_1 | three_prime_UTR | 64983649 | 64984132 | 64983649 | ID=Msa1030760-mRNA-1:three_prime_utr;Parent=Msa1030760-mRNA-1 |
| Gene Sequence |
| Protein sequence |
