AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1119970

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1119970 MtrunA17_Chr7g0251981 98.660 373 2 1 1 370 1 373 0.0 741
Msa1119970 MtrunA17_Chr8g0385891 77.299 348 74 2 6 353 5 347 0.0 545
Msa1119970 MtrunA17_Chr6g0461981 71.633 349 89 2 11 358 3 342 0.0 517
Msa1119970 MtrunA17_Chr5g0407451 49.655 290 142 1 71 360 13 298 1.86e-101 302
Msa1119970 MtrunA17_Chr4g0051841 43.253 289 162 1 74 360 24 312 1.13e-87 267
Msa1119970 MtrunA17_Chr6g0463351 29.008 262 150 9 89 331 77 321 2.91e-16 79.3
Msa1119970 MtrunA17_Chr3g0137941 26.339 224 156 5 44 264 86 303 8.53e-16 78.2
Msa1119970 MtrunA17_Chr2g0296061 24.686 239 155 4 79 295 15 250 1.52e-13 70.9
Msa1119970 MtrunA17_Chr2g0296061 26.263 198 119 7 75 249 125 318 4.30e-11 63.5
Msa1119970 MtrunA17_Chr8g0372531 25.714 210 121 7 68 253 105 303 3.10e-13 69.7
Msa1119970 MtrunA17_Chr8g0347451 27.863 262 166 9 73 315 43 300 3.30e-13 70.1
Msa1119970 MtrunA17_Chr8g0347451 24.737 190 119 5 86 251 160 349 3.73e-12 67.0
Msa1119970 MtrunA17_Chr1g0149111 27.322 183 129 3 82 264 142 320 3.43e-13 70.5
Msa1119970 MtrunA17_Chr5g0396801 25.789 190 119 5 86 253 147 336 3.48e-13 70.1
Msa1119970 MtrunA17_Chr5g0396801 27.984 243 149 9 71 295 28 262 2.85e-12 67.4
Msa1119970 MtrunA17_Chr7g0252401 30.493 223 142 6 75 293 204 417 7.01e-13 69.7
Msa1119970 MtrunA17_Chr4g0067231 23.750 240 158 4 79 295 14 251 7.20e-13 68.9
Msa1119970 MtrunA17_Chr4g0067231 24.390 205 126 7 75 255 126 325 3.78e-11 63.5
Msa1119970 MtrunA17_Chr8g0385571 30.734 218 136 7 80 293 229 435 1.42e-12 68.9
Msa1119970 MtrunA17_Chr3g0131501 30.000 220 135 8 80 293 207 413 2.74e-12 67.8
Msa1119970 MtrunA17_Chr7g0269701 28.421 190 117 6 89 264 133 317 3.23e-12 67.0
Msa1119970 MtrunA17_Chr4g0063561 25.824 182 124 4 82 259 126 300 1.56e-11 65.1
Msa1119970 MtrunA17_Chr5g0431531 25.874 286 184 7 80 350 41 313 6.13e-11 63.2
Msa1119970 MtrunA17_Chr1g0195101 27.746 173 105 6 93 251 33 199 6.71e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1119970 AT5G14040.1 78.904 365 69 2 7 363 2 366 0.0 574
Msa1119970 AT3G48850.1 68.820 356 108 1 7 362 2 354 0.0 510
Msa1119970 AT2G17270.1 50.993 302 143 3 68 368 11 308 3.47e-107 317
Msa1119970 AT5G66380.1 26.636 214 122 8 68 258 102 303 5.76e-14 72.4
Msa1119970 AT5G51050.1 29.474 285 168 12 80 348 225 492 6.18e-14 73.6
Msa1119970 AT1G25380.1 27.895 190 121 6 89 266 131 316 2.86e-13 70.9
Msa1119970 AT1G25380.2 27.895 190 121 6 89 266 131 316 2.86e-13 70.9
Msa1119970 AT3G53940.1 28.729 181 114 6 80 251 182 356 8.30e-13 69.3
Msa1119970 AT1G79900.1 25.253 198 144 3 67 264 98 291 1.31e-12 68.2
Msa1119970 AT4G01100.2 25.794 252 157 8 71 295 32 280 1.42e-12 68.6
Msa1119970 AT4G01100.1 26.778 239 157 8 71 295 32 266 1.94e-12 68.2
Msa1119970 AT5G48970.1 25.373 201 120 6 75 249 132 328 1.31e-11 65.5
Msa1119970 AT5G48970.1 23.431 239 159 4 80 295 23 260 2.86e-11 64.7
Msa1119970 AT5G48970.2 25.373 201 120 6 75 249 61 257 1.32e-11 64.7
Msa1119970 AT4G01100.3 25.571 219 149 6 88 295 1 216 3.67e-11 63.9
Msa1119970 AT4G32400.1 28.261 184 117 4 72 249 205 379 4.19e-11 64.3
Msa1119970 AT1G07030.1 27.374 179 120 4 74 249 36 207 8.33e-11 63.2
Msa1119970 AT2G47490.1 27.174 184 122 5 91 265 129 309 8.38e-11 62.8

Find 144 sgRNAs with CRISPR-Local

Find 237 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTCCGACTTGACAAATTT+TGG 0.064803 7_3:-69130092 None:intergenic
GCACAGGGTGCTTGCAAATT+TGG 0.141897 7_3:+69129873 Msa1119970:CDS
AGCACTCCTCTGTTTATTTA+TGG 0.158551 7_3:-69131658 None:intergenic
CCTTTGCTGCACTCATTCTT+TGG 0.207799 7_3:-69131082 None:intergenic
GTAGATCAAGGTCTTGTATT+TGG 0.240422 7_3:-69129952 None:intergenic
AATAACAAATGCAAGAAAAT+TGG 0.248025 7_3:-69131742 None:intergenic
GTGAATAACCGGTAGGGTTT+TGG 0.271570 7_3:-69128475 None:intergenic
CACAGGGTGCTTGCAAATTT+GGG 0.272981 7_3:+69129874 Msa1119970:CDS
ACAAGGGATTAGTGCCTCTA+TGG 0.295974 7_3:+69130246 Msa1119970:CDS
ATCACCAACTGTTGCTCCTT+TGG 0.305945 7_3:-69131206 None:intergenic
GTCAAGTCGGAAGGAGCTTT+GGG 0.313946 7_3:+69130101 Msa1119970:CDS
CTGCACTCATTCTTTGGTTG+TGG 0.319170 7_3:-69131076 None:intergenic
CCTTCTCCTAAGGAACCTTT+TGG 0.320200 7_3:+69128579 Msa1119970:CDS
ACCAAGACCTCTTGCAAAAC+CGG 0.326720 7_3:-69130060 None:intergenic
TGCACTCATTCTTTGGTTGT+GGG 0.330467 7_3:-69131075 None:intergenic
TTCTATGCTGCTTGTACTGC+TGG 0.334701 7_3:+69128627 Msa1119970:CDS
GGCGCGGCGGCGGAAGGAGC+GGG 0.336833 7_3:-69128516 None:intergenic
CCGCCTTCACTCCGTGGAAC+TGG 0.348054 7_3:+69128537 Msa1119970:CDS
TTGTATTTGGCTGCATACTC+AGG 0.350724 7_3:-69129939 None:intergenic
CTATAAATTGTCGTCATTGT+TGG 0.356180 7_3:-69131599 None:intergenic
TGTCAAGTCGGAAGGAGCTT+TGG 0.366299 7_3:+69130100 Msa1119970:CDS
TTTGCTGGTGGATACATTGC+TGG 0.369619 7_3:+69131124 Msa1119970:CDS
CGGCGCGGCGGCGGAAGGAG+CGG 0.370068 7_3:-69128517 None:intergenic
GTTCAAGGAGCAGGGAGTTA+AGG 0.373432 7_3:+69129809 Msa1119970:CDS
CGTTGCACTTTGCCCATTCG+AGG 0.378339 7_3:+69130010 Msa1119970:CDS
TTCAAGGAGCAGGGAGTTAA+GGG 0.378873 7_3:+69129810 Msa1119970:CDS
TCCTTTGCAATCTCTGCAAC+GGG 0.381681 7_3:-69131567 None:intergenic
ATAGTTTGCTTAAGAAACTT+AGG 0.383933 7_3:+69131618 Msa1119970:three_prime_UTR
ACTTAGGAAACCAGCGAATA+GGG 0.387534 7_3:+69131634 Msa1119970:three_prime_UTR
CCTCTCCGTATTGTTATGAT+TGG 0.392836 7_3:+69131373 Msa1119970:CDS
GCAATCTCTGCAACGGGAGC+AGG 0.392961 7_3:-69131561 None:intergenic
GTTATGATTGGAACACTTAC+CGG 0.392999 7_3:+69131385 Msa1119970:CDS
GGCGGCGGAAGGAGCGGGAC+CGG 0.404628 7_3:-69128511 None:intergenic
ATTCCGGATGAAAATTAATC+AGG 0.416921 7_3:-69131959 None:intergenic
ATGCAGGCTGTTGCGAAGTT+TGG 0.417122 7_3:+69131322 Msa1119970:intron
CTGACGATCTGGTGAATAAC+CGG 0.417433 7_3:-69128486 None:intergenic
AAGTACAAGAGCATCTCATC+AGG 0.418546 7_3:+69129774 Msa1119970:CDS
GATGCTTTCAAAGTCTTTGT+GGG 0.421116 7_3:+69131427 Msa1119970:CDS
TTGCAAGAGGTCTTGGTGAT+GGG 0.421210 7_3:+69130066 Msa1119970:CDS
TGGTGCAAAAGCAAAAGAAT+TGG 0.421691 7_3:+69128314 Msa1119970:five_prime_UTR
AACTTAGGAAACCAGCGAAT+AGG 0.424333 7_3:+69131633 Msa1119970:three_prime_UTR
TATTTATGGTCCCTATTCGC+TGG 0.424921 7_3:-69131644 None:intergenic
TGATGCTTTCAAAGTCTTTG+TGG 0.429250 7_3:+69131426 Msa1119970:CDS
ATTCACCAGATCGTCAGTTC+CGG 0.433147 7_3:+69128492 Msa1119970:CDS
AAGACCTTGATCTACCTTGC+TGG 0.435876 7_3:+69129960 Msa1119970:CDS
AAGTACTATTCTGATATTGC+TGG 0.438339 7_3:+69129915 Msa1119970:CDS
GAGATGCTCTTGTACTTGGC+AGG 0.444922 7_3:-69129768 None:intergenic
CTTGAGTTCTCAAGCATGGT+TGG 0.445500 7_3:+69131688 Msa1119970:three_prime_UTR
TTTGCAAGAGGTCTTGGTGA+TGG 0.446061 7_3:+69130065 Msa1119970:CDS
TCACTCCGTGGAACTGGATC+CGG 0.455713 7_3:+69128543 Msa1119970:CDS
AAGAGCATCTCATCAGGGTT+TGG 0.458213 7_3:+69129780 Msa1119970:CDS
GAGTGAAGGCGGCGCGGCGG+CGG 0.460339 7_3:-69128526 None:intergenic
CTCATTCTTTGGTTGTGGGA+TGG 0.461022 7_3:-69131071 None:intergenic
GAAGGCGGCGCGGCGGCGGA+AGG 0.466553 7_3:-69128522 None:intergenic
TGATGAGATGCTCTTGTACT+TGG 0.466999 7_3:-69129772 None:intergenic
ATCTTGCCAAAAGGTTCCTT+AGG 0.467490 7_3:-69128585 None:intergenic
GGATGGGTCCCTACATTACT+TGG 0.467879 7_3:+69129843 Msa1119970:CDS
CACTACACGCCTCTGTCAAA+AGG 0.475676 7_3:+69131853 Msa1119970:three_prime_UTR
GGAGCAGCACCACCGGTTGT+TGG 0.480665 7_3:-69131540 None:intergenic
TTCCTTTGCAATCTCTGCAA+CGG 0.481654 7_3:-69131568 None:intergenic
ATATTTGTTAGGCCAACAAC+CGG 0.488505 7_3:+69131528 Msa1119970:intron
CGGGACCGGAACTGACGATC+TGG 0.489410 7_3:-69128497 None:intergenic
CAAGGGATTAGTGCCTCTAT+GGG 0.492057 7_3:+69130247 Msa1119970:CDS
GGTGCAAAAGCAAAAGAATT+GGG 0.494159 7_3:+69128315 Msa1119970:five_prime_UTR
TTATGATTGCAGGCTGTACA+AGG 0.497538 7_3:+69130229 Msa1119970:intron
ATTCATGATTCCTTCTCCTA+AGG 0.502454 7_3:+69128569 Msa1119970:CDS
CTCAACAATAGTCTCAAAAG+AGG 0.503185 7_3:-69131032 None:intergenic
ATATATTCCCCACTGGGCTC+CGG 0.504355 7_3:-69131404 None:intergenic
CCAAAGAATGAGTGCAGCAA+AGG 0.506478 7_3:+69131082 Msa1119970:CDS
TTGCTGAAAACTTCGTAGCT+AGG 0.507807 7_3:+69131804 Msa1119970:three_prime_UTR
GTTGCGAAGTTTGGTGTGGT+TGG 0.508050 7_3:+69131331 Msa1119970:CDS
ATTACTTGGTTACAGTGCAC+AGG 0.515158 7_3:+69129857 Msa1119970:CDS
ATGATTCCTTCATTTCTCTA+CGG 0.518236 7_3:+69128444 Msa1119970:CDS
TTGTTGTCTATGCATAAGCA+TGG 0.519073 7_3:+69131890 Msa1119970:three_prime_UTR
TTCTTCCACCAAAACCCTAC+CGG 0.523169 7_3:+69128467 Msa1119970:CDS
AAAGAGACAAGGTTATCAGC+AGG 0.524035 7_3:-69131172 None:intergenic
ATGAAGGAATCATGTTTCTA+CGG 0.525899 7_3:-69128434 None:intergenic
TACATCTCGATCTTGCCAAA+AGG 0.527813 7_3:-69128594 None:intergenic
CTTAGTCAAGTGTAATATGC+AGG 0.531917 7_3:+69128698 Msa1119970:CDS
GCACTGTAACCAAGTAATGT+AGG 0.533624 7_3:-69129852 None:intergenic
CCAAAAGGTTCCTTAGGAGA+AGG 0.534266 7_3:-69128579 None:intergenic
GAAGAACCGTAGAGAAATGA+AGG 0.537076 7_3:-69128450 None:intergenic
GGACTTTAACAGCCTCGAAT+GGG 0.537558 7_3:-69130022 None:intergenic
TGTATTTGGCTGCATACTCA+GGG 0.537672 7_3:-69129938 None:intergenic
GTACAAGCAGCATAGAAAGC+AGG 0.538163 7_3:-69128621 None:intergenic
AAGCATCATATATTCCCCAC+TGG 0.538260 7_3:-69131411 None:intergenic
AACACTTACCGGAGCCCAGT+GGG 0.541109 7_3:+69131396 Msa1119970:CDS
TATGCTGCTTGTACTGCTGG+TGG 0.545880 7_3:+69128630 Msa1119970:CDS
CAAAGAATGAGTGCAGCAAA+GGG 0.546393 7_3:+69131083 Msa1119970:CDS
CACTGTAACCAAGTAATGTA+GGG 0.552514 7_3:-69129851 None:intergenic
GGGAGCAGGAGCAGCACCAC+CGG 0.555232 7_3:-69131547 None:intergenic
CCAAAATTTGTCAAGTCGGA+AGG 0.555895 7_3:+69130092 Msa1119970:CDS
CCAAGACCTCTTGCAAAACC+GGG 0.555939 7_3:-69130059 None:intergenic
CGGACTTTAACAGCCTCGAA+TGG 0.556736 7_3:-69130023 None:intergenic
AATTGTAGAAACAAAGTGAT+TGG 0.558917 7_3:+69128294 None:intergenic
GTTGCTTGAGTTCTCAAGCA+TGG 0.562493 7_3:+69131684 Msa1119970:three_prime_UTR
TGCTGGTTCAGCATCTGCTG+AGG 0.562706 7_3:+69129977 Msa1119970:CDS
AGAAGGAATCATGAATCTAC+CGG 0.563282 7_3:-69128562 None:intergenic
TGCAGCAAAGGGCTGCAACT+TGG 0.564769 7_3:+69131094 Msa1119970:CDS
GTCCGTGTTCAAACTCAGCC+CGG 0.566951 7_3:+69130041 Msa1119970:CDS
AGCAAAATGAAATGCGAGAG+AGG 0.572437 7_3:-69128352 None:intergenic
GTGTTCCAATCATAACAATA+CGG 0.581864 7_3:-69131378 None:intergenic
GATCCAGTTCCACGGAGTGA+AGG 0.581952 7_3:-69128540 None:intergenic
TGAACCAGCAAGGTAGATCA+AGG 0.583686 7_3:-69129964 None:intergenic
TGTTGTCTATGCATAAGCAT+GGG 0.584430 7_3:+69131891 Msa1119970:three_prime_UTR
ATGCTTTCAAAGTCTTTGTG+GGG 0.587996 7_3:+69131428 Msa1119970:CDS
AGCATCATATATTCCCCACT+GGG 0.588188 7_3:-69131410 None:intergenic
CGTTGTTCAGAAAAGAGACA+AGG 0.592020 7_3:-69131183 None:intergenic
GGAATCTGCCTTCCCCATAG+AGG 0.592926 7_3:-69130260 None:intergenic
CGATCTGGTGAATAACCGGT+AGG 0.594124 7_3:-69128482 None:intergenic
AAATGAAATGCGAGAGAGGA+GGG 0.594287 7_3:-69128348 None:intergenic
AATACGGAGAGGGAGACCTC+TGG 0.599896 7_3:-69131362 None:intergenic
GAACGAATTCTCTCTCGCAA+TGG 0.601158 7_3:+69128389 Msa1119970:exon
GTGGTTGGTCTCTTCACCAG+AGG 0.608443 7_3:+69131346 Msa1119970:CDS
GGCTGTTGCGAAGTTTGGTG+TGG 0.612493 7_3:+69131327 Msa1119970:intron
GATTAGTGCCTCTATGGGGA+AGG 0.612930 7_3:+69130252 Msa1119970:CDS
CCAGTTCCACGGAGTGAAGG+CGG 0.613356 7_3:-69128537 None:intergenic
AACGCCAAAGGAGCAACAGT+TGG 0.613664 7_3:+69131202 Msa1119970:CDS
GCTGGTGGAATTCTTAGCTG+TGG 0.615544 7_3:+69128645 Msa1119970:CDS
ACGGAGTGAAGGCGGCGCGG+CGG 0.615971 7_3:-69128529 None:intergenic
GCTCCCAAAATTTGTCAAGT+CGG 0.621493 7_3:+69130088 Msa1119970:CDS
AGATGCTCTTGTACTTGGCA+GGG 0.621873 7_3:-69129767 None:intergenic
CAATCATAACAATACGGAGA+GGG 0.625979 7_3:-69131372 None:intergenic
TCAAGTCGGAAGGAGCTTTG+GGG 0.630516 7_3:+69130102 Msa1119970:CDS
TTACACTTGACTAAGTCAAG+AGG 0.631255 7_3:-69128690 None:intergenic
TTACTTGGTTACAGTGCACA+GGG 0.631543 7_3:+69129858 Msa1119970:CDS
TCCCGTTGCAGAGATTGCAA+AGG 0.642017 7_3:+69131566 Msa1119970:CDS
CAGCAGATGCTGAACCAGCA+AGG 0.642348 7_3:-69129974 None:intergenic
ATCTACCGGATCCAGTTCCA+CGG 0.647055 7_3:-69128548 None:intergenic
GATCTGGTGAATAACCGGTA+GGG 0.649771 7_3:-69128481 None:intergenic
TATGATTGCAGGCTGTACAA+GGG 0.654041 7_3:+69130230 Msa1119970:intron
TCCACGGAGTGAAGGCGGCG+CGG 0.654298 7_3:-69128532 None:intergenic
TTTGTTAGGCCAACAACCGG+TGG 0.658305 7_3:+69131531 Msa1119970:intron
TGTCTATGCATAAGCATGGG+TGG 0.661496 7_3:+69131894 Msa1119970:three_prime_UTR
AACCGGGCTGAGTTTGAACA+CGG 0.669826 7_3:-69130043 None:intergenic
AGTACAAGAGCATCTCATCA+GGG 0.671144 7_3:+69129775 Msa1119970:CDS
AAAATGAAATGCGAGAGAGG+AGG 0.671379 7_3:-69128349 None:intergenic
AAATAAACAGAGGAGTGCTG+AGG 0.681529 7_3:+69131662 Msa1119970:three_prime_UTR
GTAATGTAGGGACCCATCCG+CGG 0.692836 7_3:-69129839 None:intergenic
GAACACTTACCGGAGCCCAG+TGG 0.694776 7_3:+69131395 Msa1119970:CDS
TAGGGACCATAAATAAACAG+AGG 0.701316 7_3:+69131652 Msa1119970:three_prime_UTR
AAGGGATTAGTGCCTCTATG+GGG 0.721830 7_3:+69130248 Msa1119970:CDS
ACACTTACCGGAGCCCAGTG+GGG 0.735878 7_3:+69131397 Msa1119970:CDS
CCAATCATAACAATACGGAG+AGG 0.738908 7_3:-69131373 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTTTGTTATATTTGTT+AGG + chr7_3:69131517-69131536 Msa1119970:intron 10.0%
!! AAAATAACAAAAAAGGATTA+TGG - chr7_3:69130778-69130797 None:intergenic 15.0%
!!! GCATTTGTTATTTTAAATTT+TGG + chr7_3:69131753-69131772 Msa1119970:three_prime_UTR 15.0%
!!! TTGTTATTTTAAATTTTGGT+AGG + chr7_3:69131757-69131776 Msa1119970:three_prime_UTR 15.0%
!! ACTAATAAAATCGAAATTCT+AGG - chr7_3:69128976-69128995 None:intergenic 20.0%
!! TGTGATGAAATATTCATATT+TGG + chr7_3:69129119-69129138 Msa1119970:intron 20.0%
!! TGTTGAAGATTATTCATATT+TGG + chr7_3:69129380-69129399 Msa1119970:intron 20.0%
!! TTTGTAATAAATAGCATTTG+CGG - chr7_3:69129552-69129571 None:intergenic 20.0%
!! AATTACTAGTATTGTTAAAC+TGG + chr7_3:69129651-69129670 Msa1119970:intron 20.0%
!! ACTAAATATATTATGATTGC+AGG + chr7_3:69130219-69130238 Msa1119970:intron 20.0%
!! GCTGTTAAAATTTATCATTT+AGG + chr7_3:69130523-69130542 Msa1119970:intron 20.0%
!!! TTTTAGAAAATTCATTCAAG+AGG + chr7_3:69130572-69130591 Msa1119970:intron 20.0%
!!! TGATATATTTGTTCTAAAGT+GGG + chr7_3:69131478-69131497 Msa1119970:intron 20.0%
!! AATAACAAATGCAAGAAAAT+TGG - chr7_3:69131745-69131764 None:intergenic 20.0%
!!! TATTTTAAATTTTGGTAGGA+TGG + chr7_3:69131761-69131780 Msa1119970:three_prime_UTR 20.0%
!!! GCGATTTATGTTTGATTTTA+AGG + chr7_3:69128775-69128794 Msa1119970:intron 25.0%
! TGAATGTTGTTGAATTGTTA+TGG + chr7_3:69128850-69128869 Msa1119970:intron 25.0%
!!! TGATTGTGATACTGTTATTT+TGG + chr7_3:69128882-69128901 Msa1119970:intron 25.0%
! AAGAAAACTGCAAAATTCAA+TGG - chr7_3:69129029-69129048 None:intergenic 25.0%
!!! TTTGATTTTTGTTGATCTAG+TGG + chr7_3:69129060-69129079 Msa1119970:intron 25.0%
! ATGAATAATCTTCAACACAA+TGG - chr7_3:69129377-69129396 None:intergenic 25.0%
!! TTATATCCTTGACAAACTTT+TGG - chr7_3:69130601-69130620 None:intergenic 25.0%
! CTAAAGACATTCAAAAGAAT+GGG - chr7_3:69130629-69130648 None:intergenic 25.0%
! TCTAAAGACATTCAAAAGAA+TGG - chr7_3:69130630-69130649 None:intergenic 25.0%
! TAGAAGATATATGAGTAAGT+AGG - chr7_3:69130814-69130833 None:intergenic 25.0%
!!! GTTTTACATGTCTTATTATC+AGG - chr7_3:69130972-69130991 None:intergenic 25.0%
!!! GTGATATATTTGTTCTAAAG+TGG + chr7_3:69131477-69131496 Msa1119970:intron 25.0%
!!! ATAGTTTGCTTAAGAAACTT+AGG + chr7_3:69131618-69131637 Msa1119970:three_prime_UTR 25.0%
!! ATGATATAATTTTGCGTGTT+AGG + chr7_3:69131828-69131847 Msa1119970:three_prime_UTR 25.0%
!! TGATATAATTTTGCGTGTTA+GGG + chr7_3:69131829-69131848 Msa1119970:three_prime_UTR 25.0%
!! TTACCTGATTAATTTTCATC+CGG + chr7_3:69131956-69131975 Msa1119970:three_prime_UTR 25.0%
!! TTTTACCAACAAAAACATTC+CGG - chr7_3:69131978-69131997 None:intergenic 25.0%
! ATGAAGGAATCATGTTTCTA+CGG - chr7_3:69128437-69128456 None:intergenic 30.0%
ATGATTCCTTCATTTCTCTA+CGG + chr7_3:69128444-69128463 Msa1119970:CDS 30.0%
!! GGTGTTTATTTGATTTGTGA+TGG + chr7_3:69128796-69128815 Msa1119970:intron 30.0%
! TAGATCTGAGAAATGCTTTT+AGG + chr7_3:69128821-69128840 Msa1119970:intron 30.0%
!! CTTGTTGTATGTTAAGTTGA+AGG + chr7_3:69128932-69128951 Msa1119970:intron 30.0%
!! AGTCTGTTGATATTTTGAGT+AGG + chr7_3:69129089-69129108 Msa1119970:intron 30.0%
!!! TTGTCGTTTTTAATTACCAC+TGG - chr7_3:69129258-69129277 None:intergenic 30.0%
CAAAATCTCAACAGAGTAAA+AGG - chr7_3:69129333-69129352 None:intergenic 30.0%
! AGATTCAGCAATTTAAGACT+AGG - chr7_3:69129590-69129609 None:intergenic 30.0%
TAGGATTGGAATTGTTTAGT+TGG + chr7_3:69129689-69129708 Msa1119970:intron 30.0%
AAGTACTATTCTGATATTGC+TGG + chr7_3:69129915-69129934 Msa1119970:CDS 30.0%
CTTCAAATGTAGAACTTACA+TGG - chr7_3:69130284-69130303 None:intergenic 30.0%
CAAAAAAATGATGTGCAAAC+TGG - chr7_3:69130399-69130418 None:intergenic 30.0%
ACAGCAAAAATATCAACAGA+CGG - chr7_3:69130508-69130527 None:intergenic 30.0%
TAAAACTCATAAGTAGAAGC+AGG - chr7_3:69130557-69130576 None:intergenic 30.0%
TGAGAAATGATGAAACTCAT+TGG + chr7_3:69130850-69130869 Msa1119970:intron 30.0%
CTCATTGGTATGAATATTGA+TGG + chr7_3:69130865-69130884 Msa1119970:intron 30.0%
TGTCATTATGTGTTACGAAT+AGG + chr7_3:69130934-69130953 Msa1119970:intron 30.0%
ATTATGTGTTACGAATAGGA+AGG + chr7_3:69130938-69130957 Msa1119970:intron 30.0%
TTATGTGTTACGAATAGGAA+GGG + chr7_3:69130939-69130958 Msa1119970:intron 30.0%
GTGTTCCAATCATAACAATA+CGG - chr7_3:69131381-69131400 None:intergenic 30.0%
CTATAAATTGTCGTCATTGT+TGG - chr7_3:69131602-69131621 None:intergenic 30.0%
AGAAAAATTGATCTCAATCG+AGG - chr7_3:69131930-69131949 None:intergenic 30.0%
ATTCCGGATGAAAATTAATC+AGG - chr7_3:69131962-69131981 None:intergenic 30.0%
TGGTGCAAAAGCAAAAGAAT+TGG + chr7_3:69128314-69128333 Msa1119970:five_prime_UTR 35.0%
GGTGCAAAAGCAAAAGAATT+GGG + chr7_3:69128315-69128334 Msa1119970:five_prime_UTR 35.0%
AGAAGGAATCATGAATCTAC+CGG - chr7_3:69128565-69128584 None:intergenic 35.0%
ATTCATGATTCCTTCTCCTA+AGG + chr7_3:69128569-69128588 Msa1119970:CDS 35.0%
TTACACTTGACTAAGTCAAG+AGG - chr7_3:69128693-69128712 None:intergenic 35.0%
CTTAGTCAAGTGTAATATGC+AGG + chr7_3:69128698-69128717 Msa1119970:CDS 35.0%
! GCTTTTCTTCTTCGTTTTCT+TGG + chr7_3:69128725-69128744 Msa1119970:intron 35.0%
AAGTTGAAGGATCGTTTGAT+TGG + chr7_3:69128945-69128964 Msa1119970:intron 35.0%
AAGGCAGCTAGAATAACAAA+AGG - chr7_3:69129314-69129333 None:intergenic 35.0%
TGTTAAACTGGTTGTGTTGT+TGG + chr7_3:69129663-69129682 Msa1119970:intron 35.0%
CACTGTAACCAAGTAATGTA+GGG - chr7_3:69129854-69129873 None:intergenic 35.0%
! GTAGATCAAGGTCTTGTATT+TGG - chr7_3:69129955-69129974 None:intergenic 35.0%
!! CTTCCGACTTGACAAATTTT+GGG - chr7_3:69130094-69130113 None:intergenic 35.0%
CTTGATCTATGCTAGGAATT+AGG + chr7_3:69130186-69130205 Msa1119970:intron 35.0%
ATCTATGCTAGGAATTAGGA+TGG + chr7_3:69130190-69130209 Msa1119970:intron 35.0%
TCTATGCTAGGAATTAGGAT+GGG + chr7_3:69130191-69130210 Msa1119970:intron 35.0%
!! AATTGACTTGAAGTCCAACA+AGG - chr7_3:69130470-69130489 None:intergenic 35.0%
TATGTGTTACGAATAGGAAG+GGG + chr7_3:69130940-69130959 Msa1119970:intron 35.0%
CTCAACAATAGTCTCAAAAG+AGG - chr7_3:69131035-69131054 None:intergenic 35.0%
TGTTATCTACTGTTTGATGC+AGG + chr7_3:69131306-69131325 Msa1119970:intron 35.0%
CAATCATAACAATACGGAGA+GGG - chr7_3:69131375-69131394 None:intergenic 35.0%
GTTATGATTGGAACACTTAC+CGG + chr7_3:69131385-69131404 Msa1119970:CDS 35.0%
TGATGCTTTCAAAGTCTTTG+TGG + chr7_3:69131426-69131445 Msa1119970:CDS 35.0%
GATGCTTTCAAAGTCTTTGT+GGG + chr7_3:69131427-69131446 Msa1119970:CDS 35.0%
ATGCTTTCAAAGTCTTTGTG+GGG + chr7_3:69131428-69131447 Msa1119970:CDS 35.0%
! ATATTTGTTAGGCCAACAAC+CGG + chr7_3:69131528-69131547 Msa1119970:intron 35.0%
TAGGGACCATAAATAAACAG+AGG + chr7_3:69131652-69131671 Msa1119970:three_prime_UTR 35.0%
AGCACTCCTCTGTTTATTTA+TGG - chr7_3:69131661-69131680 None:intergenic 35.0%
! ATGTGTATTCCTTTTGACAG+AGG - chr7_3:69131865-69131884 None:intergenic 35.0%
TTGTTGTCTATGCATAAGCA+TGG + chr7_3:69131890-69131909 Msa1119970:three_prime_UTR 35.0%
TGTTGTCTATGCATAAGCAT+GGG + chr7_3:69131891-69131910 Msa1119970:three_prime_UTR 35.0%
!! TTCATCCGGAATGTTTTTGT+TGG + chr7_3:69131970-69131989 Msa1119970:three_prime_UTR 35.0%
AAATGAAATGCGAGAGAGGA+GGG - chr7_3:69128351-69128370 None:intergenic 40.0%
AAAATGAAATGCGAGAGAGG+AGG - chr7_3:69128352-69128371 None:intergenic 40.0%
AGCAAAATGAAATGCGAGAG+AGG - chr7_3:69128355-69128374 None:intergenic 40.0%
GAAGAACCGTAGAGAAATGA+AGG - chr7_3:69128453-69128472 None:intergenic 40.0%
ATCTTGCCAAAAGGTTCCTT+AGG - chr7_3:69128588-69128607 None:intergenic 40.0%
TACATCTCGATCTTGCCAAA+AGG - chr7_3:69128597-69128616 None:intergenic 40.0%
! CTTCTTCGTTTTCTTGGATC+TGG + chr7_3:69128731-69128750 Msa1119970:intron 40.0%
TAGTTATGAAACACAGCCAC+CGG + chr7_3:69129204-69129223 Msa1119970:intron 40.0%
!! TGTGTTGTTGGTGTTAGGAT+TGG + chr7_3:69129675-69129694 Msa1119970:intron 40.0%
TGATGAGATGCTCTTGTACT+TGG - chr7_3:69129775-69129794 None:intergenic 40.0%
!! AAGTACAAGAGCATCTCATC+AGG + chr7_3:69129774-69129793 Msa1119970:CDS 40.0%
!! AGTACAAGAGCATCTCATCA+GGG + chr7_3:69129775-69129794 Msa1119970:CDS 40.0%
!!! AGGGTTTGGAGTTTTGTTCA+AGG + chr7_3:69129794-69129813 Msa1119970:CDS 40.0%
GCACTGTAACCAAGTAATGT+AGG - chr7_3:69129855-69129874 None:intergenic 40.0%
ATTACTTGGTTACAGTGCAC+AGG + chr7_3:69129857-69129876 Msa1119970:CDS 40.0%
TTACTTGGTTACAGTGCACA+GGG + chr7_3:69129858-69129877 Msa1119970:CDS 40.0%
TGTATTTGGCTGCATACTCA+GGG - chr7_3:69129941-69129960 None:intergenic 40.0%
TTGTATTTGGCTGCATACTC+AGG - chr7_3:69129942-69129961 None:intergenic 40.0%
GCTCCCAAAATTTGTCAAGT+CGG + chr7_3:69130088-69130107 Msa1119970:CDS 40.0%
!! CCTTCCGACTTGACAAATTT+TGG - chr7_3:69130095-69130114 None:intergenic 40.0%
CCAAAATTTGTCAAGTCGGA+AGG + chr7_3:69130092-69130111 Msa1119970:CDS 40.0%
TGTTGCTCTTGATCTATGCT+AGG + chr7_3:69130179-69130198 Msa1119970:intron 40.0%
TTATGATTGCAGGCTGTACA+AGG + chr7_3:69130229-69130248 Msa1119970:intron 40.0%
TATGATTGCAGGCTGTACAA+GGG + chr7_3:69130230-69130249 Msa1119970:intron 40.0%
ACTGCAATATCCTTGTTGAC+TGG + chr7_3:69130321-69130340 Msa1119970:intron 40.0%
! TTCAAAGTGTCCAGTCAACA+AGG - chr7_3:69130334-69130353 None:intergenic 40.0%
AGGAAGCCAAAAGTTTGTCA+AGG + chr7_3:69130592-69130611 Msa1119970:intron 40.0%
TGCACTCATTCTTTGGTTGT+GGG - chr7_3:69131078-69131097 None:intergenic 40.0%
CAAAGAATGAGTGCAGCAAA+GGG + chr7_3:69131083-69131102 Msa1119970:CDS 40.0%
AAAGAGACAAGGTTATCAGC+AGG - chr7_3:69131175-69131194 None:intergenic 40.0%
CGTTGTTCAGAAAAGAGACA+AGG - chr7_3:69131186-69131205 None:intergenic 40.0%
! TCTTTTCTGAACAACGCCAA+AGG + chr7_3:69131190-69131209 Msa1119970:CDS 40.0%
CCAATCATAACAATACGGAG+AGG - chr7_3:69131376-69131395 None:intergenic 40.0%
CCTCTCCGTATTGTTATGAT+TGG + chr7_3:69131373-69131392 Msa1119970:CDS 40.0%
AGCATCATATATTCCCCACT+GGG - chr7_3:69131413-69131432 None:intergenic 40.0%
AAGCATCATATATTCCCCAC+TGG - chr7_3:69131414-69131433 None:intergenic 40.0%
TTCCTTTGCAATCTCTGCAA+CGG - chr7_3:69131571-69131590 None:intergenic 40.0%
AACTTAGGAAACCAGCGAAT+AGG + chr7_3:69131633-69131652 Msa1119970:three_prime_UTR 40.0%
ACTTAGGAAACCAGCGAATA+GGG + chr7_3:69131634-69131653 Msa1119970:three_prime_UTR 40.0%
TATTTATGGTCCCTATTCGC+TGG - chr7_3:69131647-69131666 None:intergenic 40.0%
!! AAATAAACAGAGGAGTGCTG+AGG + chr7_3:69131662-69131681 Msa1119970:three_prime_UTR 40.0%
TTGCTGAAAACTTCGTAGCT+AGG + chr7_3:69131804-69131823 Msa1119970:three_prime_UTR 40.0%
GAACGAATTCTCTCTCGCAA+TGG + chr7_3:69128389-69128408 Msa1119970:exon 45.0%
TTCTTCCACCAAAACCCTAC+CGG + chr7_3:69128467-69128486 Msa1119970:CDS 45.0%
!! AATAACCGGTAGGGTTTTGG+TGG - chr7_3:69128475-69128494 None:intergenic 45.0%
! GTGAATAACCGGTAGGGTTT+TGG - chr7_3:69128478-69128497 None:intergenic 45.0%
GATCTGGTGAATAACCGGTA+GGG - chr7_3:69128484-69128503 None:intergenic 45.0%
CTGACGATCTGGTGAATAAC+CGG - chr7_3:69128489-69128508 None:intergenic 45.0%
ATTCACCAGATCGTCAGTTC+CGG + chr7_3:69128492-69128511 Msa1119970:CDS 45.0%
CCAAAAGGTTCCTTAGGAGA+AGG - chr7_3:69128582-69128601 None:intergenic 45.0%
! CCTTCTCCTAAGGAACCTTT+TGG + chr7_3:69128579-69128598 Msa1119970:CDS 45.0%
GTACAAGCAGCATAGAAAGC+AGG - chr7_3:69128624-69128643 None:intergenic 45.0%
! TTCTATGCTGCTTGTACTGC+TGG + chr7_3:69128627-69128646 Msa1119970:CDS 45.0%
CATTGACACATCAACACCAG+TGG + chr7_3:69129239-69129258 Msa1119970:intron 45.0%
! CTGGTTGTGTTGTTGGTGTT+AGG + chr7_3:69129670-69129689 Msa1119970:intron 45.0%
AGATGCTCTTGTACTTGGCA+GGG - chr7_3:69129770-69129789 None:intergenic 45.0%
!! AAGAGCATCTCATCAGGGTT+TGG + chr7_3:69129780-69129799 Msa1119970:CDS 45.0%
!!! TGGAGTTTTGTTCAAGGAGC+AGG + chr7_3:69129800-69129819 Msa1119970:CDS 45.0%
!!! GGAGTTTTGTTCAAGGAGCA+GGG + chr7_3:69129801-69129820 Msa1119970:CDS 45.0%
TTCAAGGAGCAGGGAGTTAA+GGG + chr7_3:69129810-69129829 Msa1119970:CDS 45.0%
! CACAGGGTGCTTGCAAATTT+GGG + chr7_3:69129874-69129893 Msa1119970:CDS 45.0%
AAGACCTTGATCTACCTTGC+TGG + chr7_3:69129960-69129979 Msa1119970:CDS 45.0%
TGAACCAGCAAGGTAGATCA+AGG - chr7_3:69129967-69129986 None:intergenic 45.0%
GGACTTTAACAGCCTCGAAT+GGG - chr7_3:69130025-69130044 None:intergenic 45.0%
ACCAAGACCTCTTGCAAAAC+CGG - chr7_3:69130063-69130082 None:intergenic 45.0%
TTTGCAAGAGGTCTTGGTGA+TGG + chr7_3:69130065-69130084 Msa1119970:CDS 45.0%
! TTGCAAGAGGTCTTGGTGAT+GGG + chr7_3:69130066-69130085 Msa1119970:CDS 45.0%
! ACAAGGGATTAGTGCCTCTA+TGG + chr7_3:69130246-69130265 Msa1119970:CDS 45.0%
! CAAGGGATTAGTGCCTCTAT+GGG + chr7_3:69130247-69130266 Msa1119970:CDS 45.0%
! AAGGGATTAGTGCCTCTATG+GGG + chr7_3:69130248-69130267 Msa1119970:CDS 45.0%
GTTACTTCCGTTACCATCTG+AGG + chr7_3:69130369-69130388 Msa1119970:intron 45.0%
TGGAATGCCTCAGATGGTAA+CGG - chr7_3:69130379-69130398 None:intergenic 45.0%
GTCATGTTGCACTACCTTGT+TGG + chr7_3:69130453-69130472 Msa1119970:intron 45.0%
CTCATTCTTTGGTTGTGGGA+TGG - chr7_3:69131074-69131093 None:intergenic 45.0%
CTGCACTCATTCTTTGGTTG+TGG - chr7_3:69131079-69131098 None:intergenic 45.0%
CCTTTGCTGCACTCATTCTT+TGG - chr7_3:69131085-69131104 None:intergenic 45.0%
CCAAAGAATGAGTGCAGCAA+AGG + chr7_3:69131082-69131101 Msa1119970:CDS 45.0%
!!! CAACTTGGTGTCAGTTTTGC+TGG + chr7_3:69131109-69131128 Msa1119970:CDS 45.0%
! TTTGCTGGTGGATACATTGC+TGG + chr7_3:69131124-69131143 Msa1119970:CDS 45.0%
ATCACCAACTGTTGCTCCTT+TGG - chr7_3:69131209-69131228 None:intergenic 45.0%
TCCTTTGCAATCTCTGCAAC+GGG - chr7_3:69131570-69131589 None:intergenic 45.0%
GTTGCTTGAGTTCTCAAGCA+TGG + chr7_3:69131684-69131703 Msa1119970:three_prime_UTR 45.0%
CTTGAGTTCTCAAGCATGGT+TGG + chr7_3:69131688-69131707 Msa1119970:three_prime_UTR 45.0%
! CGAAGTTTTCAGCAACTGGA+AGG - chr7_3:69131799-69131818 None:intergenic 45.0%
! GCTACGAAGTTTTCAGCAAC+TGG - chr7_3:69131803-69131822 None:intergenic 45.0%
TGTCTATGCATAAGCATGGG+TGG + chr7_3:69131894-69131913 Msa1119970:three_prime_UTR 45.0%
!! AAAAAAAAAAATAACAAAAA+AGG - chr7_3:69130785-69130804 None:intergenic 5.0%
!! AATATAACAAAAAATTTATT+AGG - chr7_3:69131513-69131532 None:intergenic 5.0%
CGATCTGGTGAATAACCGGT+AGG - chr7_3:69128485-69128504 None:intergenic 50.0%
ATCTACCGGATCCAGTTCCA+CGG - chr7_3:69128551-69128570 None:intergenic 50.0%
! TATGCTGCTTGTACTGCTGG+TGG + chr7_3:69128630-69128649 Msa1119970:CDS 50.0%
GCTGGTGGAATTCTTAGCTG+TGG + chr7_3:69128645-69128664 Msa1119970:CDS 50.0%
GAGATGCTCTTGTACTTGGC+AGG - chr7_3:69129771-69129790 None:intergenic 50.0%
GTTCAAGGAGCAGGGAGTTA+AGG + chr7_3:69129809-69129828 Msa1119970:CDS 50.0%
!! GGAGTTAAGGGCTTTTTCCG+CGG + chr7_3:69129822-69129841 Msa1119970:CDS 50.0%
!! TTAAGGGCTTTTTCCGCGGA+TGG + chr7_3:69129826-69129845 Msa1119970:CDS 50.0%
!! TAAGGGCTTTTTCCGCGGAT+GGG + chr7_3:69129827-69129846 Msa1119970:CDS 50.0%
GGATGGGTCCCTACATTACT+TGG + chr7_3:69129843-69129862 Msa1119970:CDS 50.0%
! GCACAGGGTGCTTGCAAATT+TGG + chr7_3:69129873-69129892 Msa1119970:CDS 50.0%
CGGACTTTAACAGCCTCGAA+TGG - chr7_3:69130026-69130045 None:intergenic 50.0%
AACCGGGCTGAGTTTGAACA+CGG - chr7_3:69130046-69130065 None:intergenic 50.0%
CCAAGACCTCTTGCAAAACC+GGG - chr7_3:69130062-69130081 None:intergenic 50.0%
TGTCAAGTCGGAAGGAGCTT+TGG + chr7_3:69130100-69130119 Msa1119970:CDS 50.0%
GTCAAGTCGGAAGGAGCTTT+GGG + chr7_3:69130101-69130120 Msa1119970:CDS 50.0%
TCAAGTCGGAAGGAGCTTTG+GGG + chr7_3:69130102-69130121 Msa1119970:CDS 50.0%
GATTAGTGCCTCTATGGGGA+AGG + chr7_3:69130252-69130271 Msa1119970:CDS 50.0%
GCAAACTGGAATGCCTCAGA+TGG - chr7_3:69130385-69130404 None:intergenic 50.0%
!!! CTTGGTGTCAGTTTTGCTGG+TGG + chr7_3:69131112-69131131 Msa1119970:CDS 50.0%
AACGCCAAAGGAGCAACAGT+TGG + chr7_3:69131202-69131221 Msa1119970:CDS 50.0%
ATGCAGGCTGTTGCGAAGTT+TGG + chr7_3:69131322-69131341 Msa1119970:intron 50.0%
!! GTTGCGAAGTTTGGTGTGGT+TGG + chr7_3:69131331-69131350 Msa1119970:CDS 50.0%
ATATATTCCCCACTGGGCTC+CGG - chr7_3:69131407-69131426 None:intergenic 50.0%
TTTGTTAGGCCAACAACCGG+TGG + chr7_3:69131531-69131550 Msa1119970:intron 50.0%
TCCCGTTGCAGAGATTGCAA+AGG + chr7_3:69131566-69131585 Msa1119970:CDS 50.0%
CACTACACGCCTCTGTCAAA+AGG + chr7_3:69131853-69131872 Msa1119970:three_prime_UTR 50.0%
GATCCAGTTCCACGGAGTGA+AGG - chr7_3:69128543-69128562 None:intergenic 55.0%
TCACTCCGTGGAACTGGATC+CGG + chr7_3:69128543-69128562 Msa1119970:CDS 55.0%
GTCAATGACCGTGTCGTGAC+CGG - chr7_3:69129226-69129245 None:intergenic 55.0%
GTAATGTAGGGACCCATCCG+CGG - chr7_3:69129842-69129861 None:intergenic 55.0%
CAGCAGATGCTGAACCAGCA+AGG - chr7_3:69129977-69129996 None:intergenic 55.0%
!! TGCTGGTTCAGCATCTGCTG+AGG + chr7_3:69129977-69129996 Msa1119970:CDS 55.0%
CGTTGCACTTTGCCCATTCG+AGG + chr7_3:69130010-69130029 Msa1119970:CDS 55.0%
GTCCGTGTTCAAACTCAGCC+CGG + chr7_3:69130041-69130060 Msa1119970:CDS 55.0%
! ACTCAGCCCGGTTTTGCAAG+AGG + chr7_3:69130053-69130072 Msa1119970:CDS 55.0%
! CCCGGTTTTGCAAGAGGTCT+TGG + chr7_3:69130059-69130078 Msa1119970:CDS 55.0%
GGAATCTGCCTTCCCCATAG+AGG - chr7_3:69130263-69130282 None:intergenic 55.0%
TGCAGCAAAGGGCTGCAACT+TGG + chr7_3:69131094-69131113 Msa1119970:CDS 55.0%
! GGCTGTTGCGAAGTTTGGTG+TGG + chr7_3:69131327-69131346 Msa1119970:intron 55.0%
!! GTGGTTGGTCTCTTCACCAG+AGG + chr7_3:69131346-69131365 Msa1119970:CDS 55.0%
AATACGGAGAGGGAGACCTC+TGG - chr7_3:69131365-69131384 None:intergenic 55.0%
AACACTTACCGGAGCCCAGT+GGG + chr7_3:69131396-69131415 Msa1119970:CDS 55.0%
CCAGTTCCACGGAGTGAAGG+CGG - chr7_3:69128540-69128559 None:intergenic 60.0%
AATGACCGTGTCGTGACCGG+TGG - chr7_3:69129223-69129242 None:intergenic 60.0%
GAACACTTACCGGAGCCCAG+TGG + chr7_3:69131395-69131414 Msa1119970:CDS 60.0%
ACACTTACCGGAGCCCAGTG+GGG + chr7_3:69131397-69131416 Msa1119970:CDS 60.0%
GCAATCTCTGCAACGGGAGC+AGG - chr7_3:69131564-69131583 None:intergenic 60.0%
CGGGACCGGAACTGACGATC+TGG - chr7_3:69128500-69128519 None:intergenic 65.0%
CCGCCTTCACTCCGTGGAAC+TGG + chr7_3:69128537-69128556 Msa1119970:CDS 65.0%
CACAGCCACCGGTCACGACA+CGG + chr7_3:69129215-69129234 Msa1119970:intron 65.0%
! GGAGCAGCACCACCGGTTGT+TGG - chr7_3:69131543-69131562 None:intergenic 65.0%
TCCACGGAGTGAAGGCGGCG+CGG - chr7_3:69128535-69128554 None:intergenic 70.0%
GGGAGCAGGAGCAGCACCAC+CGG - chr7_3:69131550-69131569 None:intergenic 70.0%
ACGGAGTGAAGGCGGCGCGG+CGG - chr7_3:69128532-69128551 None:intergenic 75.0%
! GGCGGCGGAAGGAGCGGGAC+CGG - chr7_3:69128514-69128533 None:intergenic 80.0%
! GAGTGAAGGCGGCGCGGCGG+CGG - chr7_3:69128529-69128548 None:intergenic 80.0%
! GCCGCGCCGCCTTCACTCCG+TGG + chr7_3:69128531-69128550 Msa1119970:CDS 80.0%
! GGCGCGGCGGCGGAAGGAGC+GGG - chr7_3:69128519-69128538 None:intergenic 85.0%
! CGGCGCGGCGGCGGAAGGAG+CGG - chr7_3:69128520-69128539 None:intergenic 85.0%
! GAAGGCGGCGCGGCGGCGGA+AGG - chr7_3:69128525-69128544 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 69128306 69132091 69128306 ID=Msa1119970;Name=Msa1119970
chr7_3 mRNA 69128306 69132091 69128306 ID=Msa1119970-mRNA-1;Parent=Msa1119970;Name=Msa1119970-mRNA-1;_AED=0.08;_eAED=0.08;_QI=102|1|1|1|1|1|6|498|370
chr7_3 exon 69128306 69128719 69128306 ID=Msa1119970-mRNA-1:exon:17476;Parent=Msa1119970-mRNA-1
chr7_3 exon 69129762 69130123 69129762 ID=Msa1119970-mRNA-1:exon:17477;Parent=Msa1119970-mRNA-1
chr7_3 exon 69130241 69130284 69130241 ID=Msa1119970-mRNA-1:exon:17478;Parent=Msa1119970-mRNA-1
chr7_3 exon 69131014 69131228 69131014 ID=Msa1119970-mRNA-1:exon:17479;Parent=Msa1119970-mRNA-1
chr7_3 exon 69131328 69131452 69131328 ID=Msa1119970-mRNA-1:exon:17480;Parent=Msa1119970-mRNA-1
chr7_3 exon 69131539 69132091 69131539 ID=Msa1119970-mRNA-1:exon:17481;Parent=Msa1119970-mRNA-1
chr7_3 five_prime_UTR 69128306 69128407 69128306 ID=Msa1119970-mRNA-1:five_prime_utr;Parent=Msa1119970-mRNA-1
chr7_3 CDS 69128408 69128719 69128408 ID=Msa1119970-mRNA-1:cds;Parent=Msa1119970-mRNA-1
chr7_3 CDS 69129762 69130123 69129762 ID=Msa1119970-mRNA-1:cds;Parent=Msa1119970-mRNA-1
chr7_3 CDS 69130241 69130284 69130241 ID=Msa1119970-mRNA-1:cds;Parent=Msa1119970-mRNA-1
chr7_3 CDS 69131014 69131228 69131014 ID=Msa1119970-mRNA-1:cds;Parent=Msa1119970-mRNA-1
chr7_3 CDS 69131328 69131452 69131328 ID=Msa1119970-mRNA-1:cds;Parent=Msa1119970-mRNA-1
chr7_3 CDS 69131539 69131593 69131539 ID=Msa1119970-mRNA-1:cds;Parent=Msa1119970-mRNA-1
chr7_3 three_prime_UTR 69131594 69132091 69131594 ID=Msa1119970-mRNA-1:three_prime_utr;Parent=Msa1119970-mRNA-1
Gene Sequence

>Msa1119970

ATGGCAGAATCATCTTCTTCTTCTAACCGTAGAAACATGATTCCTTCATTTCTCTACGGTTCTTCCACCAAAACCCTACCGGTTATTCACCAGATCGTCAGTTCCGGTCCCGCTCCTTCCGCCGCCGCGCCGCCTTCACTCCGTGGAACTGGATCCGGTAGATTCATGATTCCTTCTCCTAAGGAACCTTTTGGCAAGATCGAGATGTATTCTCCTGCTTTCTATGCTGCTTGTACTGCTGGTGGAATTCTTAGCTGTGGTCTTACTCATATGACTGTTACTCCTCTTGACTTAGTCAAGTGTAATATGCAGATTGACCCTGCCAAGTACAAGAGCATCTCATCAGGGTTTGGAGTTTTGTTCAAGGAGCAGGGAGTTAAGGGCTTTTTCCGCGGATGGGTCCCTACATTACTTGGTTACAGTGCACAGGGTGCTTGCAAATTTGGGTTCTACGAGTTCTTTAAGAAGTACTATTCTGATATTGCTGGCCCTGAGTATGCAGCCAAATACAAGACCTTGATCTACCTTGCTGGTTCAGCATCTGCTGAGGTTATTGCTGACGTTGCACTTTGCCCATTCGAGGCTGTTAAAGTCCGTGTTCAAACTCAGCCCGGTTTTGCAAGAGGTCTTGGTGATGGGCTCCCAAAATTTGTCAAGTCGGAAGGAGCTTTGGGGCTGTACAAGGGATTAGTGCCTCTATGGGGAAGGCAGATTCCATACACTATGATGAAATTTGCCTCTTTTGAGACTATTGTTGAGCAAATCTATAAGCATGCCATCCCACAACCAAAGAATGAGTGCAGCAAAGGGCTGCAACTTGGTGTCAGTTTTGCTGGTGGATACATTGCTGGTGTACTTTGTGCAATTGTGTCTCATCCTGCTGATAACCTTGTCTCTTTTCTGAACAACGCCAAAGGAGCAACAGTTGGTGATGCTGTTGCGAAGTTTGGTGTGGTTGGTCTCTTCACCAGAGGTCTCCCTCTCCGTATTGTTATGATTGGAACACTTACCGGAGCCCAGTGGGGAATATATGATGCTTTCAAAGTCTTTGTGGGGCTGCCAACAACCGGTGGTGCTGCTCCTGCTCCCGTTGCAGAGATTGCAAAGGAATGA
Protein sequence

>Msa1119970

MAESSSSSNRRNMIPSFLYGSSTKTLPVIHQIVSSGPAPSAAAPPSLRGTGSGRFMIPSPKEPFGKIEMYSPAFYAACTAGGILSCGLTHMTVTPLDLVKCNMQIDPAKYKSISSGFGVLFKEQGVKGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYAAKYKTLIYLAGSASAEVIADVALCPFEAVKVRVQTQPGFARGLGDGLPKFVKSEGALGLYKGLVPLWGRQIPYTMMKFASFETIVEQIYKHAIPQPKNECSKGLQLGVSFAGGYIAGVLCAIVSHPADNLVSFLNNAKGATVGDAVAKFGVVGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGAAPAPVAEIAKE*