Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1032230 | XP_003624725.3 | 96.009 | 426 | 15 | 1 | 1 | 426 | 1 | 424 | 0.0 | 850 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1032230 | sp|Q93ZL5|CDF2_ARATH | 36.828 | 372 | 177 | 14 | 40 | 393 | 77 | 408 | 4.78e-52 | 184 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1032230 | A0A396H9C4 | 96.009 | 426 | 15 | 1 | 1 | 426 | 1 | 424 | 0.0 | 850 |
Gene ID | Type | Classification |
---|---|---|
Msa1032230 | TF | C2C2-Dof |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa1032230 | Msa1072160 | 0.959124 | 4.253884e-117 | -8.615850e-47 |
Msa1032230 | Msa1083460 | -0.806221 | 9.139390e-50 | -8.615850e-47 |
Msa1032230 | Msa1118280 | 0.881693 | 1.941844e-70 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1032230 | MtrunA17_Chr7g0254161 | 96.009 | 426 | 15 | 1 | 1 | 426 | 1 | 424 | 0.0 | 850 |
Msa1032230 | MtrunA17_Chr6g0460731 | 50.535 | 374 | 138 | 9 | 8 | 350 | 10 | 367 | 4.28e-106 | 318 |
Msa1032230 | MtrunA17_Chr6g0460721 | 47.230 | 343 | 142 | 9 | 8 | 335 | 10 | 328 | 8.50e-93 | 283 |
Msa1032230 | MtrunA17_Chr6g0453321 | 35.000 | 500 | 223 | 18 | 3 | 425 | 1 | 475 | 4.54e-64 | 214 |
Msa1032230 | MtrunA17_Chr4g0042481 | 32.323 | 495 | 230 | 17 | 3 | 424 | 1 | 463 | 1.16e-54 | 188 |
Msa1032230 | MtrunA17_Chr7g0217581 | 36.036 | 444 | 203 | 15 | 38 | 425 | 164 | 582 | 2.63e-54 | 189 |
Msa1032230 | MtrunA17_Chr8g0355261 | 32.770 | 473 | 226 | 14 | 5 | 426 | 8 | 439 | 4.62e-54 | 186 |
Msa1032230 | MtrunA17_Chr3g0092111 | 34.078 | 358 | 188 | 8 | 83 | 421 | 116 | 444 | 1.76e-49 | 174 |
Msa1032230 | MtrunA17_Chr2g0283811 | 56.000 | 100 | 37 | 1 | 97 | 196 | 41 | 133 | 4.98e-32 | 119 |
Msa1032230 | MtrunA17_Chr5g0417571 | 65.116 | 86 | 24 | 1 | 86 | 165 | 121 | 206 | 1.14e-31 | 123 |
Msa1032230 | MtrunA17_Chr5g0417551 | 31.594 | 345 | 127 | 15 | 97 | 426 | 121 | 371 | 3.24e-31 | 122 |
Msa1032230 | MtrunA17_Chr5g0417561 | 30.117 | 342 | 136 | 11 | 97 | 426 | 113 | 363 | 1.04e-30 | 121 |
Msa1032230 | MtrunA17_Chr5g0417601 | 69.014 | 71 | 22 | 0 | 86 | 156 | 123 | 193 | 2.96e-28 | 114 |
Msa1032230 | MtrunA17_Chr8g0367161 | 51.807 | 83 | 39 | 1 | 77 | 158 | 5 | 87 | 7.93e-25 | 104 |
Msa1032230 | MtrunA17_Chr3g0127201 | 55.556 | 81 | 30 | 1 | 77 | 157 | 7 | 81 | 8.02e-25 | 103 |
Msa1032230 | MtrunA17_Chr8g0346551 | 61.905 | 63 | 24 | 0 | 98 | 160 | 19 | 81 | 9.85e-25 | 102 |
Msa1032230 | MtrunA17_Chr8g0374251 | 57.534 | 73 | 31 | 0 | 103 | 175 | 68 | 140 | 1.82e-24 | 103 |
Msa1032230 | MtrunA17_Chr8g0374111 | 38.462 | 130 | 55 | 3 | 58 | 187 | 3 | 107 | 6.03e-24 | 99.4 |
Msa1032230 | MtrunA17_Chr4g0010151 | 65.517 | 58 | 20 | 0 | 99 | 156 | 78 | 135 | 6.48e-24 | 102 |
Msa1032230 | MtrunA17_Chr2g0308011 | 73.469 | 49 | 13 | 0 | 103 | 151 | 37 | 85 | 6.70e-24 | 99.0 |
Msa1032230 | MtrunA17_Chr2g0326001 | 66.102 | 59 | 20 | 0 | 98 | 156 | 35 | 93 | 1.20e-23 | 100 |
Msa1032230 | MtrunA17_Chr2g0328021 | 56.000 | 75 | 33 | 0 | 82 | 156 | 41 | 115 | 1.75e-23 | 99.8 |
Msa1032230 | MtrunA17_Chr4g0031411 | 37.903 | 124 | 74 | 2 | 90 | 211 | 60 | 182 | 2.69e-23 | 100 |
Msa1032230 | MtrunA17_Chr4g0047001 | 70.909 | 55 | 16 | 0 | 104 | 158 | 56 | 110 | 3.64e-23 | 100 |
Msa1032230 | MtrunA17_Chr8g0341671 | 69.231 | 52 | 16 | 0 | 103 | 154 | 20 | 71 | 4.91e-23 | 96.7 |
Msa1032230 | MtrunA17_Chr4g0061761 | 67.925 | 53 | 17 | 0 | 101 | 153 | 38 | 90 | 6.74e-23 | 98.6 |
Msa1032230 | MtrunA17_Chr4g0030051 | 62.121 | 66 | 24 | 1 | 91 | 155 | 28 | 93 | 1.95e-22 | 96.7 |
Msa1032230 | MtrunA17_Chr1g0188851 | 51.899 | 79 | 33 | 1 | 82 | 155 | 17 | 95 | 2.16e-22 | 96.7 |
Msa1032230 | MtrunA17_Chr2g0282441 | 59.375 | 64 | 26 | 0 | 91 | 154 | 13 | 76 | 2.86e-22 | 97.1 |
Msa1032230 | MtrunA17_Chr7g0237921 | 38.760 | 129 | 66 | 2 | 91 | 217 | 62 | 179 | 3.16e-22 | 97.1 |
Msa1032230 | MtrunA17_Chr7g0223311 | 69.091 | 55 | 16 | 1 | 104 | 157 | 78 | 132 | 2.04e-21 | 95.1 |
Msa1032230 | MtrunA17_Chr5g0411951 | 65.455 | 55 | 19 | 0 | 99 | 153 | 39 | 93 | 2.06e-21 | 94.7 |
Msa1032230 | MtrunA17_Chr2g0282051 | 67.857 | 56 | 17 | 1 | 103 | 158 | 46 | 100 | 2.48e-21 | 93.2 |
Msa1032230 | MtrunA17_Chr3g0126201 | 67.308 | 52 | 17 | 0 | 105 | 156 | 53 | 104 | 3.94e-21 | 93.6 |
Msa1032230 | MtrunA17_Chr2g0282511 | 69.388 | 49 | 15 | 0 | 103 | 151 | 45 | 93 | 6.54e-21 | 92.8 |
Msa1032230 | MtrunA17_Chr1g0177251 | 67.308 | 52 | 17 | 0 | 105 | 156 | 14 | 65 | 7.25e-21 | 92.0 |
Msa1032230 | MtrunA17_Chr4g0047761 | 66.071 | 56 | 18 | 1 | 103 | 158 | 72 | 126 | 7.95e-21 | 92.8 |
Msa1032230 | MtrunA17_Chr3g0117601 | 58.065 | 62 | 25 | 1 | 93 | 153 | 50 | 111 | 2.39e-20 | 91.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1032230 | AT5G39660.3 | 36.828 | 372 | 177 | 14 | 40 | 393 | 77 | 408 | 4.86e-53 | 184 |
Msa1032230 | AT5G39660.1 | 36.828 | 372 | 177 | 14 | 40 | 393 | 77 | 408 | 4.86e-53 | 184 |
Msa1032230 | AT5G39660.2 | 36.828 | 372 | 177 | 14 | 40 | 393 | 77 | 408 | 4.86e-53 | 184 |
Msa1032230 | AT3G47500.1 | 31.959 | 485 | 231 | 16 | 3 | 426 | 2 | 448 | 5.49e-50 | 176 |
Msa1032230 | AT5G62430.1 | 36.462 | 277 | 80 | 8 | 3 | 277 | 1 | 183 | 1.12e-37 | 139 |
Msa1032230 | AT1G26790.1 | 45.238 | 168 | 85 | 4 | 8 | 169 | 11 | 177 | 5.31e-34 | 130 |
Msa1032230 | AT1G29160.1 | 81.667 | 60 | 11 | 0 | 97 | 156 | 56 | 115 | 8.99e-33 | 122 |
Msa1032230 | AT2G34140.1 | 64.198 | 81 | 29 | 0 | 97 | 177 | 52 | 132 | 1.53e-32 | 121 |
Msa1032230 | AT1G69570.1 | 65.823 | 79 | 27 | 0 | 91 | 169 | 120 | 198 | 4.20e-32 | 126 |
Msa1032230 | AT3G55370.1 | 57.143 | 70 | 30 | 0 | 99 | 168 | 72 | 141 | 9.36e-25 | 104 |
Msa1032230 | AT3G55370.2 | 57.143 | 70 | 30 | 0 | 99 | 168 | 72 | 141 | 1.21e-24 | 104 |
Msa1032230 | AT3G55370.3 | 57.143 | 70 | 30 | 0 | 99 | 168 | 117 | 186 | 1.88e-24 | 104 |
Msa1032230 | AT5G60850.1 | 54.762 | 84 | 32 | 2 | 103 | 186 | 51 | 128 | 2.90e-24 | 102 |
Msa1032230 | AT5G60200.1 | 56.338 | 71 | 31 | 0 | 99 | 169 | 51 | 121 | 4.56e-24 | 100 |
Msa1032230 | AT1G51700.1 | 69.231 | 52 | 16 | 0 | 103 | 154 | 33 | 84 | 5.51e-24 | 99.0 |
Msa1032230 | AT4G24060.1 | 44.444 | 117 | 60 | 2 | 100 | 214 | 50 | 163 | 1.31e-23 | 101 |
Msa1032230 | AT3G61850.2 | 64.407 | 59 | 21 | 0 | 98 | 156 | 57 | 115 | 1.67e-23 | 100 |
Msa1032230 | AT3G61850.3 | 64.407 | 59 | 21 | 0 | 98 | 156 | 57 | 115 | 1.67e-23 | 100 |
Msa1032230 | AT3G61850.1 | 64.407 | 59 | 21 | 0 | 98 | 156 | 69 | 127 | 2.24e-23 | 99.8 |
Msa1032230 | AT3G61850.5 | 64.407 | 59 | 21 | 0 | 98 | 156 | 57 | 115 | 2.60e-23 | 100 |
Msa1032230 | AT2G28810.2 | 66.071 | 56 | 19 | 0 | 99 | 154 | 73 | 128 | 3.12e-23 | 100 |
Msa1032230 | AT3G61850.4 | 64.407 | 59 | 21 | 0 | 98 | 156 | 69 | 127 | 3.39e-23 | 100 |
Msa1032230 | AT3G21270.1 | 69.811 | 53 | 16 | 0 | 103 | 155 | 29 | 81 | 3.54e-23 | 97.1 |
Msa1032230 | AT2G28810.1 | 66.071 | 56 | 19 | 0 | 99 | 154 | 90 | 145 | 5.35e-23 | 99.8 |
Msa1032230 | AT2G37590.1 | 63.793 | 58 | 21 | 0 | 99 | 156 | 85 | 142 | 6.33e-23 | 99.4 |
Msa1032230 | AT3G45610.1 | 52.857 | 70 | 33 | 0 | 99 | 168 | 36 | 105 | 6.40e-23 | 97.4 |
Msa1032230 | AT1G07640.1 | 69.091 | 55 | 16 | 1 | 103 | 156 | 21 | 75 | 1.24e-22 | 97.4 |
Msa1032230 | AT1G07640.2 | 69.091 | 55 | 16 | 1 | 103 | 156 | 77 | 131 | 1.73e-22 | 98.2 |
Msa1032230 | AT1G28310.1 | 68.519 | 54 | 17 | 0 | 103 | 156 | 27 | 80 | 2.23e-22 | 97.4 |
Msa1032230 | AT4G00940.1 | 56.944 | 72 | 27 | 1 | 91 | 158 | 52 | 123 | 2.29e-22 | 97.1 |
Msa1032230 | AT4G00940.3 | 56.944 | 72 | 27 | 1 | 91 | 158 | 52 | 123 | 2.29e-22 | 97.1 |
Msa1032230 | AT4G00940.2 | 56.944 | 72 | 27 | 1 | 91 | 158 | 52 | 123 | 2.29e-22 | 97.1 |
Msa1032230 | AT1G07640.3 | 69.091 | 55 | 16 | 1 | 103 | 156 | 85 | 139 | 2.51e-22 | 97.8 |
Msa1032230 | AT5G65590.1 | 70.370 | 54 | 16 | 0 | 103 | 156 | 41 | 94 | 2.65e-22 | 97.4 |
Msa1032230 | AT1G28310.2 | 68.519 | 54 | 17 | 0 | 103 | 156 | 51 | 104 | 3.14e-22 | 97.4 |
Msa1032230 | AT5G02460.1 | 44.898 | 98 | 53 | 1 | 99 | 195 | 91 | 188 | 4.41e-22 | 97.8 |
Msa1032230 | AT1G64620.1 | 65.385 | 52 | 18 | 0 | 100 | 151 | 46 | 97 | 6.31e-22 | 96.7 |
Msa1032230 | AT3G50410.1 | 70.588 | 51 | 15 | 0 | 105 | 155 | 32 | 82 | 6.58e-22 | 94.7 |
Msa1032230 | AT4G38000.1 | 66.071 | 56 | 18 | 1 | 102 | 156 | 40 | 95 | 7.86e-22 | 94.4 |
Msa1032230 | AT5G66940.1 | 50.000 | 80 | 33 | 1 | 90 | 169 | 26 | 98 | 8.36e-22 | 94.0 |
Msa1032230 | AT2G28510.1 | 66.071 | 56 | 19 | 0 | 105 | 160 | 50 | 105 | 1.63e-21 | 94.4 |
Msa1032230 | AT4G21050.1 | 40.800 | 125 | 59 | 3 | 76 | 198 | 4 | 115 | 2.74e-21 | 92.0 |
Msa1032230 | AT2G46590.1 | 62.264 | 53 | 20 | 0 | 98 | 150 | 63 | 115 | 1.27e-20 | 93.2 |
Msa1032230 | AT3G52440.1 | 65.385 | 52 | 18 | 0 | 105 | 156 | 27 | 78 | 1.37e-20 | 90.9 |
Msa1032230 | AT3G52440.2 | 65.385 | 52 | 18 | 0 | 105 | 156 | 46 | 97 | 1.53e-20 | 91.3 |
Msa1032230 | AT2G46590.2 | 62.264 | 53 | 20 | 0 | 98 | 150 | 75 | 127 | 1.58e-20 | 92.8 |
Msa1032230 | AT1G21340.1 | 66.000 | 50 | 17 | 0 | 105 | 154 | 40 | 89 | 3.34e-20 | 90.1 |
Msa1032230 | AT1G47655.1 | 70.213 | 47 | 14 | 0 | 105 | 151 | 31 | 77 | 3.55e-20 | 89.0 |
Msa1032230 | AT5G62940.1 | 57.812 | 64 | 26 | 1 | 91 | 153 | 60 | 123 | 9.11e-20 | 90.9 |
Msa1032230 | AT4G21040.1 | 63.462 | 52 | 19 | 0 | 105 | 156 | 27 | 78 | 7.21e-18 | 82.8 |
Msa1032230 | AT4G21080.1 | 57.895 | 57 | 24 | 0 | 105 | 161 | 27 | 83 | 2.65e-17 | 81.6 |
Msa1032230 | AT4G21030.1 | 59.091 | 44 | 18 | 0 | 105 | 148 | 23 | 66 | 2.78e-11 | 62.8 |
Find 116 sgRNAs with CRISPR-Local
Find 362 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCTTCTTCATTAGGCTTCT+TGG | 0.163517 | 7_1:-67170627 | None:intergenic |
TTTGGGTGGCTCTCAGATTT+TGG | 0.205376 | 7_1:+67170661 | Msa1032230:CDS |
GATCATGGTATTATGCTATT+TGG | 0.221788 | 7_1:+67168438 | Msa1032230:CDS |
AACGAGACTGTATTGAAATT+TGG | 0.235896 | 7_1:+67170029 | Msa1032230:CDS |
TGTCCAATTCCGGCCAATTC+TGG | 0.261036 | 7_1:+67168483 | Msa1032230:CDS |
AAAATTATTATATGCTTTCC+TGG | 0.315121 | 7_1:-67170721 | None:intergenic |
GTGGGCTTGGAATTTACTAT+TGG | 0.321756 | 7_1:-67169675 | None:intergenic |
GGTCCAGAATTGGCCGGAAT+TGG | 0.321957 | 7_1:-67168486 | None:intergenic |
CGTGTTATCTTCGGTGGGCT+TGG | 0.325634 | 7_1:-67169688 | None:intergenic |
TATCTCTATTGTGCTTTCCT+AGG | 0.342762 | 7_1:-67170493 | None:intergenic |
GCTATTTGGTTGGAAGATTC+CGG | 0.345460 | 7_1:+67168452 | Msa1032230:CDS |
GATTCGCAAAGAGGGGTATC+AGG | 0.380348 | 7_1:-67170053 | None:intergenic |
GCAAGAACTGCCAAAGGTAT+TGG | 0.383831 | 7_1:+67169844 | Msa1032230:CDS |
AGAAGGAAAAGACGGTGTTT+TGG | 0.384688 | 7_1:+67170643 | Msa1032230:CDS |
ACACCTATGTTGGCAATTCC+AGG | 0.386307 | 7_1:+67170347 | Msa1032230:CDS |
CAGAACACAATGCATCAAAT+TGG | 0.395828 | 7_1:+67170213 | Msa1032230:CDS |
TTTATCTTGATCCGTATTAC+CGG | 0.399758 | 7_1:-67169715 | None:intergenic |
GGTAGTACCCATGGAGAAAC+AGG | 0.400241 | 7_1:-67170248 | None:intergenic |
TTGGAATAATGTTGCTTCAA+TGG | 0.402306 | 7_1:+67170283 | Msa1032230:CDS |
TTATTCCAACCTGGATTCAT+TGG | 0.406197 | 7_1:-67170269 | None:intergenic |
AGACAATTCTTCTGATTCAA+TGG | 0.409932 | 7_1:+67169620 | Msa1032230:CDS |
TTGGCCGGAATTGGACATTC+CGG | 0.413804 | 7_1:-67168477 | None:intergenic |
CACCAGCAGTCCAATACCTT+TGG | 0.414239 | 7_1:-67169854 | None:intergenic |
TCGTGGTTACTATAATTTGC+CGG | 0.419212 | 7_1:-67169941 | None:intergenic |
ACAAGTAACAGTTGCTGCTC+AGG | 0.422483 | 7_1:+67170455 | Msa1032230:CDS |
GGACACTGAACAATCTTGTC+TGG | 0.427093 | 7_1:-67169750 | None:intergenic |
AACAGTTGCTGCTCAGGAAA+TGG | 0.428682 | 7_1:+67170461 | Msa1032230:CDS |
ATCTCTATTGTGCTTTCCTA+GGG | 0.433575 | 7_1:-67170492 | None:intergenic |
CTATTGTGCTTTCCTAGGGT+TGG | 0.437965 | 7_1:-67170488 | None:intergenic |
TAAAACAGACAAGTGTGTTC+CGG | 0.446244 | 7_1:+67170535 | Msa1032230:CDS |
CAGTCTCGAAAAGTCCTATC+CGG | 0.447133 | 7_1:+67170591 | Msa1032230:CDS |
ATGTACCATGGGTCCAGAAT+TGG | 0.447645 | 7_1:-67168496 | None:intergenic |
ACCGGTCTCCGTGTTATCTT+CGG | 0.448248 | 7_1:-67169697 | None:intergenic |
TTCCGATAGGTGCTGGGAGG+CGG | 0.450898 | 7_1:+67169892 | Msa1032230:CDS |
AGAAATGTTCCGATAGGTGC+TGG | 0.459160 | 7_1:+67169885 | Msa1032230:CDS |
GTAACAAACACTGGCAATCA+AGG | 0.459236 | 7_1:+67170179 | Msa1032230:CDS |
ATGGTATTATGCTATTTGGT+TGG | 0.461686 | 7_1:+67168442 | Msa1032230:CDS |
TGGTTGGAAGATTCCGGTGC+CGG | 0.462466 | 7_1:+67168458 | Msa1032230:CDS |
TACCCCTCTTTGCGAATCAA+TGG | 0.468240 | 7_1:+67170058 | Msa1032230:CDS |
ACAAGAGTCTATACCAGAAA+AGG | 0.468668 | 7_1:+67169650 | Msa1032230:CDS |
TAACACGGAGACCGGTAATA+CGG | 0.475853 | 7_1:+67169704 | Msa1032230:CDS |
GGTGCCGGAATGTCCAATTC+CGG | 0.477329 | 7_1:+67168473 | Msa1032230:CDS |
GTGTTATCCTGTTTCTCCAT+GGG | 0.479488 | 7_1:+67170241 | Msa1032230:CDS |
AGGATACTTGCAGCAGTACA+AGG | 0.490268 | 7_1:+67169553 | Msa1032230:intron |
AGTGTTATCCTGTTTCTCCA+TGG | 0.495037 | 7_1:+67170240 | Msa1032230:CDS |
GGAATTGGACATTCCGGCAC+CGG | 0.499395 | 7_1:-67168471 | None:intergenic |
TGCCAAAGGTATTGGACTGC+TGG | 0.503181 | 7_1:+67169852 | Msa1032230:CDS |
ACCAAGAAGCCTAATGAAGA+AGG | 0.504636 | 7_1:+67170626 | Msa1032230:CDS |
GTCTCCGTGTTATCTTCGGT+GGG | 0.507024 | 7_1:-67169693 | None:intergenic |
AGAAGAATTGTCTTGTTGCT+CGG | 0.510082 | 7_1:-67169610 | None:intergenic |
AGCACCTAGCCTCTCAATAC+CGG | 0.512664 | 7_1:+67169922 | Msa1032230:CDS |
CGTGGTTGGAACTCCATTCG+TGG | 0.513560 | 7_1:-67169958 | None:intergenic |
TTCTCATGCTCATACAATCC+AGG | 0.520401 | 7_1:+67170703 | Msa1032230:CDS |
CAATACAGTCTCGTTATCCA+TGG | 0.528405 | 7_1:-67170021 | None:intergenic |
TTCCGCCTCCCAGCACCTAT+CGG | 0.529039 | 7_1:-67169894 | None:intergenic |
GTAGTTTCTAGCCTCGTGGT+TGG | 0.531644 | 7_1:-67169972 | None:intergenic |
TATAATTTGCCGGTATTGAG+AGG | 0.538214 | 7_1:-67169931 | None:intergenic |
ACCGAAGATAACACGGAGAC+CGG | 0.539518 | 7_1:+67169696 | Msa1032230:CDS |
GGAATTGCCAACATAGGTGT+TGG | 0.540068 | 7_1:-67170344 | None:intergenic |
GTGTCCGCGATGCAACAGTT+GGG | 0.540349 | 7_1:+67169767 | Msa1032230:CDS |
GTTGTTGAAATAACAAAACT+TGG | 0.540457 | 7_1:-67169793 | None:intergenic |
ATTCCATTGATTCGCAAAGA+GGG | 0.549386 | 7_1:-67170061 | None:intergenic |
CGATCACCACCACACATCCA+TGG | 0.550071 | 7_1:+67170004 | Msa1032230:CDS |
GGATTCATTGGTAGTACCCA+TGG | 0.554215 | 7_1:-67170257 | None:intergenic |
GTAGCTAATGTAGCCCGGAT+AGG | 0.554980 | 7_1:-67170605 | None:intergenic |
GGTCTCCGTGTTATCTTCGG+TGG | 0.555105 | 7_1:-67169694 | None:intergenic |
ATGAGAAATAGCTCCTGAGC+TGG | 0.556629 | 7_1:-67170687 | None:intergenic |
CATGGATGTGTGGTGGTGAT+CGG | 0.559985 | 7_1:-67170003 | None:intergenic |
GGAAATGGCTCACCAACCCT+AGG | 0.561749 | 7_1:+67170476 | Msa1032230:CDS |
TCTGAGACTGAGAAGGATCA+TGG | 0.563095 | 7_1:+67168423 | Msa1032230:CDS |
CAGTTCTTGCAGAAATGTCG+AGG | 0.563164 | 7_1:-67169831 | None:intergenic |
GGCAGCAATTCATCCGACTT+CGG | 0.564105 | 7_1:+67170304 | Msa1032230:CDS |
CGACTTCGGCATCCATGCAA+TGG | 0.568776 | 7_1:+67170318 | Msa1032230:CDS |
TCTTGGTAGCTAATGTAGCC+CGG | 0.573000 | 7_1:-67170610 | None:intergenic |
AACTTGTAGCAGCATCACAT+TGG | 0.575411 | 7_1:+67170396 | Msa1032230:CDS |
AGTGTCCGCGATGCAACAGT+TGG | 0.576096 | 7_1:+67169766 | Msa1032230:CDS |
GATTCCATTGATTCGCAAAG+AGG | 0.579861 | 7_1:-67170062 | None:intergenic |
CAAATTATAGTAACCACGAA+TGG | 0.580675 | 7_1:+67169945 | Msa1032230:CDS |
TCCGGCCAATTCTGGACCCA+TGG | 0.581876 | 7_1:+67168491 | Msa1032230:CDS |
GCAGCAACTGTTACTTGTAG+AGG | 0.584099 | 7_1:-67170450 | None:intergenic |
TGGGTACTACCAATGAATCC+AGG | 0.586175 | 7_1:+67170260 | Msa1032230:CDS |
CATTGCATGGATGCCGAAGT+CGG | 0.595329 | 7_1:-67170317 | None:intergenic |
AGTCTCGAAAAGTCCTATCC+GGG | 0.597281 | 7_1:+67170592 | Msa1032230:CDS |
ATTCCTGGAATTGCCAACAT+AGG | 0.597632 | 7_1:-67170350 | None:intergenic |
AGAGAGGAACCGTCCTTGTG+TGG | 0.598119 | 7_1:+67170149 | Msa1032230:CDS |
TACTACCAATGAATCCAGGT+TGG | 0.601762 | 7_1:+67170264 | Msa1032230:CDS |
CAGTTCTGTGCAACATAGAG+AGG | 0.603480 | 7_1:+67170133 | Msa1032230:CDS |
GGATCTTCTGTAACAAACAC+TGG | 0.604848 | 7_1:+67170170 | Msa1032230:CDS |
TTCCATTGATTCGCAAAGAG+GGG | 0.609139 | 7_1:-67170060 | None:intergenic |
CCTAATGAAGAAGGAAAAGA+CGG | 0.611817 | 7_1:+67170635 | Msa1032230:CDS |
GAAATGTTCCGATAGGTGCT+GGG | 0.612734 | 7_1:+67169886 | Msa1032230:CDS |
GGCGGCGAGAGGCAAAGTGA+TGG | 0.613227 | 7_1:-67170425 | None:intergenic |
GATGCTGCTACAAGTTGTAA+AGG | 0.617256 | 7_1:-67170389 | None:intergenic |
CAGTACAAGGAAAACAGAAG+TGG | 0.617838 | 7_1:+67169566 | Msa1032230:CDS |
GAACATGTCTGAGACTGAGA+AGG | 0.619721 | 7_1:+67168416 | Msa1032230:CDS |
GAAGCAACATTATTCCAACC+TGG | 0.621410 | 7_1:-67170278 | None:intergenic |
CAAAGGTATTGGACTGCTGG+TGG | 0.623552 | 7_1:+67169855 | Msa1032230:CDS |
CAAGCCCACCGAAGATAACA+CGG | 0.626181 | 7_1:+67169689 | Msa1032230:CDS |
TTGTAGAGGAAGGCGGCGAG+AGG | 0.626239 | 7_1:-67170436 | None:intergenic |
TTTGCCGGTATTGAGAGGCT+AGG | 0.626885 | 7_1:-67169926 | None:intergenic |
ATGGTGTCCAACACCTATGT+TGG | 0.630522 | 7_1:+67170337 | Msa1032230:CDS |
CAACTGTTACTTGTAGAGGA+AGG | 0.635921 | 7_1:-67170446 | None:intergenic |
GTTTGTAGTTTCTAGCCTCG+TGG | 0.637790 | 7_1:-67169976 | None:intergenic |
AGGTGTTGGACACCATTGCA+TGG | 0.641634 | 7_1:-67170330 | None:intergenic |
ACGATGAGAAATGTTCCGAT+AGG | 0.643759 | 7_1:+67169879 | Msa1032230:CDS |
CGTTATCCATGGATGTGTGG+TGG | 0.660626 | 7_1:-67170010 | None:intergenic |
ATTTCTGCAAGAACTGCCAA+AGG | 0.665461 | 7_1:+67169838 | Msa1032230:CDS |
ACAGAAGATCCACACAAGGA+CGG | 0.669016 | 7_1:-67170158 | None:intergenic |
ACCATGGGTCCAGAATTGGC+CGG | 0.674302 | 7_1:-67168492 | None:intergenic |
GTAGCAGCATCACATTGGAG+TGG | 0.674545 | 7_1:+67170401 | Msa1032230:CDS |
CTGTTACTTGTAGAGGAAGG+CGG | 0.676133 | 7_1:-67170443 | None:intergenic |
TCTCGTTATCCATGGATGTG+TGG | 0.680622 | 7_1:-67170013 | None:intergenic |
CGAATGGAGTTCCAACCACG+AGG | 0.695228 | 7_1:+67169961 | Msa1032230:CDS |
GTGTCCCAACTGTTGCATCG+CGG | 0.715720 | 7_1:-67169771 | None:intergenic |
TGTTACAGAAGATCCACACA+AGG | 0.727736 | 7_1:-67170162 | None:intergenic |
ATGTTCCGATAGGTGCTGGG+AGG | 0.729596 | 7_1:+67169889 | Msa1032230:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTATTTTGTTTGTTTTCTTA+TGG | + | chr7_1:67168645-67168664 | Msa1032230:intron | 15.0% |
!!! | TATTTTGTTTGTTTTCTTAT+GGG | + | chr7_1:67168646-67168665 | Msa1032230:intron | 15.0% |
!!! | AAATTGATTTTTGTAATTCT+TGG | + | chr7_1:67169087-67169106 | Msa1032230:intron | 15.0% |
!!! | TAATTTGTGGTTTAAATTTT+AGG | + | chr7_1:67169533-67169552 | Msa1032230:intron | 15.0% |
!!! | TTATTTTGTTTGTTTTCTTA+TGG | + | chr7_1:67168645-67168664 | Msa1032230:intron | 15.0% |
!!! | TATTTTGTTTGTTTTCTTAT+GGG | + | chr7_1:67168646-67168665 | Msa1032230:intron | 15.0% |
!!! | AAATTGATTTTTGTAATTCT+TGG | + | chr7_1:67169087-67169106 | Msa1032230:intron | 15.0% |
!!! | TAATTTGTGGTTTAAATTTT+AGG | + | chr7_1:67169533-67169552 | Msa1032230:intron | 15.0% |
!!! | CTGTTTTTATGTTTTTTTGA+AGG | + | chr7_1:67168358-67168377 | Msa1032230:five_prime_UTR | 20.0% |
!! | TATAGTTATATATGTACCAT+GGG | - | chr7_1:67168510-67168529 | None:intergenic | 20.0% |
!! | TTATAGTTATATATGTACCA+TGG | - | chr7_1:67168511-67168530 | None:intergenic | 20.0% |
!!! | ATTTTGTTTGTTTTCTTATG+GGG | + | chr7_1:67168647-67168666 | Msa1032230:intron | 20.0% |
!!! | TCTTTATGTTTTAATTGTGA+TGG | + | chr7_1:67169011-67169030 | Msa1032230:intron | 20.0% |
!!! | TTTTTTATGATGATTTCTCT+TGG | + | chr7_1:67169188-67169207 | Msa1032230:intron | 20.0% |
!!! | CTGTTTTTATGTTTTTTTGA+AGG | + | chr7_1:67168358-67168377 | Msa1032230:five_prime_UTR | 20.0% |
!! | TATAGTTATATATGTACCAT+GGG | - | chr7_1:67168510-67168529 | None:intergenic | 20.0% |
!! | TTATAGTTATATATGTACCA+TGG | - | chr7_1:67168511-67168530 | None:intergenic | 20.0% |
!!! | ATTTTGTTTGTTTTCTTATG+GGG | + | chr7_1:67168647-67168666 | Msa1032230:intron | 20.0% |
!!! | TCTTTATGTTTTAATTGTGA+TGG | + | chr7_1:67169011-67169030 | Msa1032230:intron | 20.0% |
!!! | TTTTTTATGATGATTTCTCT+TGG | + | chr7_1:67169188-67169207 | Msa1032230:intron | 20.0% |
! | AAACATAAAAACAGAAACAG+AGG | - | chr7_1:67168352-67168371 | None:intergenic | 25.0% |
! | TTGTATGTTGCATATGAAAA+TGG | + | chr7_1:67168600-67168619 | Msa1032230:intron | 25.0% |
! | TGTATGTTGCATATGAAAAT+GGG | + | chr7_1:67168601-67168620 | Msa1032230:intron | 25.0% |
!!! | AGGATAATTTTGTTTCTTAG+TGG | + | chr7_1:67168733-67168752 | Msa1032230:intron | 25.0% |
!!! | ATAATTTTGTTTCTTAGTGG+AGG | + | chr7_1:67168736-67168755 | Msa1032230:intron | 25.0% |
! | GACCAATATAATGTAAACAA+AGG | + | chr7_1:67168910-67168929 | Msa1032230:intron | 25.0% |
! | CAATATAATGTAAACAAAGG+CGG | + | chr7_1:67168913-67168932 | Msa1032230:intron | 25.0% |
! | ATTCATCAATCATCAATCAT+TGG | - | chr7_1:67168961-67168980 | None:intergenic | 25.0% |
! | CATTTGTACACTTAATTTCT+AGG | + | chr7_1:67169161-67169180 | Msa1032230:intron | 25.0% |
! | CTTAGTTTATCACTAATTTG+TGG | + | chr7_1:67169520-67169539 | Msa1032230:intron | 25.0% |
! | GTTGTTGAAATAACAAAACT+TGG | - | chr7_1:67169796-67169815 | None:intergenic | 25.0% |
!!! | AGTTGTAAAGGTATATTTTG+TGG | - | chr7_1:67170380-67170399 | None:intergenic | 25.0% |
! | AAACATAAAAACAGAAACAG+AGG | - | chr7_1:67168352-67168371 | None:intergenic | 25.0% |
! | TTGTATGTTGCATATGAAAA+TGG | + | chr7_1:67168600-67168619 | Msa1032230:intron | 25.0% |
! | TGTATGTTGCATATGAAAAT+GGG | + | chr7_1:67168601-67168620 | Msa1032230:intron | 25.0% |
!!! | AGGATAATTTTGTTTCTTAG+TGG | + | chr7_1:67168733-67168752 | Msa1032230:intron | 25.0% |
!!! | ATAATTTTGTTTCTTAGTGG+AGG | + | chr7_1:67168736-67168755 | Msa1032230:intron | 25.0% |
! | GACCAATATAATGTAAACAA+AGG | + | chr7_1:67168910-67168929 | Msa1032230:intron | 25.0% |
! | CAATATAATGTAAACAAAGG+CGG | + | chr7_1:67168913-67168932 | Msa1032230:intron | 25.0% |
! | ATTCATCAATCATCAATCAT+TGG | - | chr7_1:67168961-67168980 | None:intergenic | 25.0% |
! | CATTTGTACACTTAATTTCT+AGG | + | chr7_1:67169161-67169180 | Msa1032230:intron | 25.0% |
! | CTTAGTTTATCACTAATTTG+TGG | + | chr7_1:67169520-67169539 | Msa1032230:intron | 25.0% |
! | GTTGTTGAAATAACAAAACT+TGG | - | chr7_1:67169796-67169815 | None:intergenic | 25.0% |
!!! | AGTTGTAAAGGTATATTTTG+TGG | - | chr7_1:67170380-67170399 | None:intergenic | 25.0% |
GATCATGGTATTATGCTATT+TGG | + | chr7_1:67168438-67168457 | Msa1032230:CDS | 30.0% | |
! | ATGGTATTATGCTATTTGGT+TGG | + | chr7_1:67168442-67168461 | Msa1032230:CDS | 30.0% |
!! | CAAAATCTTCTGAAGTTTGA+AGG | + | chr7_1:67168713-67168732 | Msa1032230:intron | 30.0% |
!! | GATTCATTTTAATGAGCTTG+AGG | + | chr7_1:67168774-67168793 | Msa1032230:intron | 30.0% |
!! | ATTTTAATGAGCTTGAGGTA+AGG | + | chr7_1:67168779-67168798 | Msa1032230:intron | 30.0% |
GACTAAAGATTGTTATAGTC+CGG | - | chr7_1:67168836-67168855 | None:intergenic | 30.0% | |
! | CGCCTTTGTTTACATTATAT+TGG | - | chr7_1:67168915-67168934 | None:intergenic | 30.0% |
!!! | GTTTTAATTGTGATGGAAGA+TGG | + | chr7_1:67169018-67169037 | Msa1032230:intron | 30.0% |
! | ATGACTCTAAGAAAATGAAG+AGG | - | chr7_1:67169144-67169163 | None:intergenic | 30.0% |
TCCAATAGAAGTAAAAGATC+AGG | + | chr7_1:67169332-67169351 | Msa1032230:intron | 30.0% | |
! | TCCTGATCTTTTACTTCTAT+TGG | - | chr7_1:67169336-67169355 | None:intergenic | 30.0% |
TGTTATGCTTGCAAAATTTG+AGG | + | chr7_1:67169373-67169392 | Msa1032230:intron | 30.0% | |
! | AGGACACAAGTATAACTTTT+TGG | - | chr7_1:67169401-67169420 | None:intergenic | 30.0% |
ACAACAAATTCTCACATAAC+AGG | - | chr7_1:67169421-67169440 | None:intergenic | 30.0% | |
TAGACAGAGAAATGAAATCA+AGG | - | chr7_1:67169469-67169488 | None:intergenic | 30.0% | |
TCATTTCTCTGTCTATTCTT+AGG | + | chr7_1:67169474-67169493 | Msa1032230:intron | 30.0% | |
AGACAATTCTTCTGATTCAA+TGG | + | chr7_1:67169620-67169639 | Msa1032230:CDS | 30.0% | |
TTTATCTTGATCCGTATTAC+CGG | - | chr7_1:67169718-67169737 | None:intergenic | 30.0% | |
CAAATTATAGTAACCACGAA+TGG | + | chr7_1:67169945-67169964 | Msa1032230:CDS | 30.0% | |
AACGAGACTGTATTGAAATT+TGG | + | chr7_1:67170029-67170048 | Msa1032230:CDS | 30.0% | |
! | TTGGAATAATGTTGCTTCAA+TGG | + | chr7_1:67170283-67170302 | Msa1032230:CDS | 30.0% |
!! | GTTCTAATTGTTTTTCGAAC+CGG | - | chr7_1:67170557-67170576 | None:intergenic | 30.0% |
GATCATGGTATTATGCTATT+TGG | + | chr7_1:67168438-67168457 | Msa1032230:CDS | 30.0% | |
! | ATGGTATTATGCTATTTGGT+TGG | + | chr7_1:67168442-67168461 | Msa1032230:CDS | 30.0% |
!! | CAAAATCTTCTGAAGTTTGA+AGG | + | chr7_1:67168713-67168732 | Msa1032230:intron | 30.0% |
!! | GATTCATTTTAATGAGCTTG+AGG | + | chr7_1:67168774-67168793 | Msa1032230:intron | 30.0% |
!! | ATTTTAATGAGCTTGAGGTA+AGG | + | chr7_1:67168779-67168798 | Msa1032230:intron | 30.0% |
GACTAAAGATTGTTATAGTC+CGG | - | chr7_1:67168836-67168855 | None:intergenic | 30.0% | |
! | CGCCTTTGTTTACATTATAT+TGG | - | chr7_1:67168915-67168934 | None:intergenic | 30.0% |
!!! | GTTTTAATTGTGATGGAAGA+TGG | + | chr7_1:67169018-67169037 | Msa1032230:intron | 30.0% |
! | ATGACTCTAAGAAAATGAAG+AGG | - | chr7_1:67169144-67169163 | None:intergenic | 30.0% |
TCCAATAGAAGTAAAAGATC+AGG | + | chr7_1:67169332-67169351 | Msa1032230:intron | 30.0% | |
! | TCCTGATCTTTTACTTCTAT+TGG | - | chr7_1:67169336-67169355 | None:intergenic | 30.0% |
TGTTATGCTTGCAAAATTTG+AGG | + | chr7_1:67169373-67169392 | Msa1032230:intron | 30.0% | |
! | AGGACACAAGTATAACTTTT+TGG | - | chr7_1:67169401-67169420 | None:intergenic | 30.0% |
ACAACAAATTCTCACATAAC+AGG | - | chr7_1:67169421-67169440 | None:intergenic | 30.0% | |
TAGACAGAGAAATGAAATCA+AGG | - | chr7_1:67169469-67169488 | None:intergenic | 30.0% | |
TCATTTCTCTGTCTATTCTT+AGG | + | chr7_1:67169474-67169493 | Msa1032230:intron | 30.0% | |
AGACAATTCTTCTGATTCAA+TGG | + | chr7_1:67169620-67169639 | Msa1032230:CDS | 30.0% | |
TTTATCTTGATCCGTATTAC+CGG | - | chr7_1:67169718-67169737 | None:intergenic | 30.0% | |
CAAATTATAGTAACCACGAA+TGG | + | chr7_1:67169945-67169964 | Msa1032230:CDS | 30.0% | |
AACGAGACTGTATTGAAATT+TGG | + | chr7_1:67170029-67170048 | Msa1032230:CDS | 30.0% | |
! | TTGGAATAATGTTGCTTCAA+TGG | + | chr7_1:67170283-67170302 | Msa1032230:CDS | 30.0% |
!! | GTTCTAATTGTTTTTCGAAC+CGG | - | chr7_1:67170557-67170576 | None:intergenic | 30.0% |
GAAGAAAGACATAAGCTGAA+AGG | - | chr7_1:67168557-67168576 | None:intergenic | 35.0% | |
TGTTGCATATGAAAATGGGT+TGG | + | chr7_1:67168605-67168624 | Msa1032230:intron | 35.0% | |
!!! | AATGGGTTGGACGTAAATTT+TGG | + | chr7_1:67168618-67168637 | Msa1032230:intron | 35.0% |
! | TATGGGGTTGTTGAGATTTT+TGG | + | chr7_1:67168663-67168682 | Msa1032230:intron | 35.0% |
TAGTAATCCAGAGTTTAGCT+GGG | - | chr7_1:67168874-67168893 | None:intergenic | 35.0% | |
TGTAAACAAAGGCGGTATTT+AGG | + | chr7_1:67168921-67168940 | Msa1032230:intron | 35.0% | |
TTGATGTGAACCAAAGGATT+TGG | + | chr7_1:67169111-67169130 | Msa1032230:intron | 35.0% | |
! | AAGATCAGGACTAGTGAAAT+AGG | + | chr7_1:67169346-67169365 | Msa1032230:intron | 35.0% |
! | AGAAGAATTGTCTTGTTGCT+CGG | - | chr7_1:67169613-67169632 | None:intergenic | 35.0% |
ACAAGAGTCTATACCAGAAA+AGG | + | chr7_1:67169650-67169669 | Msa1032230:CDS | 35.0% | |
!!! | TTTACTATTGGCTCCTTTTC+TGG | - | chr7_1:67169666-67169685 | None:intergenic | 35.0% |
! | TATAATTTGCCGGTATTGAG+AGG | - | chr7_1:67169934-67169953 | None:intergenic | 35.0% |
! | TCGTGGTTACTATAATTTGC+CGG | - | chr7_1:67169944-67169963 | None:intergenic | 35.0% |
!! | ATTCCATTGATTCGCAAAGA+GGG | - | chr7_1:67170064-67170083 | None:intergenic | 35.0% |
CAGAACACAATGCATCAAAT+TGG | + | chr7_1:67170213-67170232 | Msa1032230:CDS | 35.0% | |
TTATTCCAACCTGGATTCAT+TGG | - | chr7_1:67170272-67170291 | None:intergenic | 35.0% | |
! | ATATTTTGTGGCTGAATTCC+TGG | - | chr7_1:67170368-67170387 | None:intergenic | 35.0% |
ATCTCTATTGTGCTTTCCTA+GGG | - | chr7_1:67170495-67170514 | None:intergenic | 35.0% | |
TATCTCTATTGTGCTTTCCT+AGG | - | chr7_1:67170496-67170515 | None:intergenic | 35.0% | |
TAAAACAGACAAGTGTGTTC+CGG | + | chr7_1:67170535-67170554 | Msa1032230:CDS | 35.0% | |
CCTAATGAAGAAGGAAAAGA+CGG | + | chr7_1:67170635-67170654 | Msa1032230:CDS | 35.0% | |
GAAGAAAGACATAAGCTGAA+AGG | - | chr7_1:67168557-67168576 | None:intergenic | 35.0% | |
TGTTGCATATGAAAATGGGT+TGG | + | chr7_1:67168605-67168624 | Msa1032230:intron | 35.0% | |
!!! | AATGGGTTGGACGTAAATTT+TGG | + | chr7_1:67168618-67168637 | Msa1032230:intron | 35.0% |
! | TATGGGGTTGTTGAGATTTT+TGG | + | chr7_1:67168663-67168682 | Msa1032230:intron | 35.0% |
TAGTAATCCAGAGTTTAGCT+GGG | - | chr7_1:67168874-67168893 | None:intergenic | 35.0% | |
TGTAAACAAAGGCGGTATTT+AGG | + | chr7_1:67168921-67168940 | Msa1032230:intron | 35.0% | |
TTGATGTGAACCAAAGGATT+TGG | + | chr7_1:67169111-67169130 | Msa1032230:intron | 35.0% | |
! | AAGATCAGGACTAGTGAAAT+AGG | + | chr7_1:67169346-67169365 | Msa1032230:intron | 35.0% |
! | AGAAGAATTGTCTTGTTGCT+CGG | - | chr7_1:67169613-67169632 | None:intergenic | 35.0% |
ACAAGAGTCTATACCAGAAA+AGG | + | chr7_1:67169650-67169669 | Msa1032230:CDS | 35.0% | |
!!! | TTTACTATTGGCTCCTTTTC+TGG | - | chr7_1:67169666-67169685 | None:intergenic | 35.0% |
! | TATAATTTGCCGGTATTGAG+AGG | - | chr7_1:67169934-67169953 | None:intergenic | 35.0% |
! | TCGTGGTTACTATAATTTGC+CGG | - | chr7_1:67169944-67169963 | None:intergenic | 35.0% |
!! | ATTCCATTGATTCGCAAAGA+GGG | - | chr7_1:67170064-67170083 | None:intergenic | 35.0% |
CAGAACACAATGCATCAAAT+TGG | + | chr7_1:67170213-67170232 | Msa1032230:CDS | 35.0% | |
TTATTCCAACCTGGATTCAT+TGG | - | chr7_1:67170272-67170291 | None:intergenic | 35.0% | |
! | ATATTTTGTGGCTGAATTCC+TGG | - | chr7_1:67170368-67170387 | None:intergenic | 35.0% |
ATCTCTATTGTGCTTTCCTA+GGG | - | chr7_1:67170495-67170514 | None:intergenic | 35.0% | |
TATCTCTATTGTGCTTTCCT+AGG | - | chr7_1:67170496-67170515 | None:intergenic | 35.0% | |
TAAAACAGACAAGTGTGTTC+CGG | + | chr7_1:67170535-67170554 | Msa1032230:CDS | 35.0% | |
CCTAATGAAGAAGGAAAAGA+CGG | + | chr7_1:67170635-67170654 | Msa1032230:CDS | 35.0% | |
GCTATTTGGTTGGAAGATTC+CGG | + | chr7_1:67168452-67168471 | Msa1032230:CDS | 40.0% | |
!!! | GGGTTGTTGAGATTTTTGGT+TGG | + | chr7_1:67168667-67168686 | Msa1032230:intron | 40.0% |
ACAAATTGTTCCGTAGAACC+CGG | + | chr7_1:67168802-67168821 | Msa1032230:intron | 40.0% | |
TTATAGTCCGGATTCAAACC+CGG | - | chr7_1:67168824-67168843 | None:intergenic | 40.0% | |
CTAGTAATCCAGAGTTTAGC+TGG | - | chr7_1:67168875-67168894 | None:intergenic | 40.0% | |
TCTGGATTACTAGAGAGTAG+AGG | + | chr7_1:67168882-67168901 | Msa1032230:intron | 40.0% | |
CTGGATTACTAGAGAGTAGA+GGG | + | chr7_1:67168883-67168902 | Msa1032230:intron | 40.0% | |
CTTGGATTGATGTGAACCAA+AGG | + | chr7_1:67169105-67169124 | Msa1032230:intron | 40.0% | |
AGGATCAAGACCAAATCCTT+TGG | - | chr7_1:67169124-67169143 | None:intergenic | 40.0% | |
! | TCTGAGATAAGCAGAAGTTG+AGG | + | chr7_1:67169297-67169316 | Msa1032230:intron | 40.0% |
CAGTACAAGGAAAACAGAAG+TGG | + | chr7_1:67169566-67169585 | Msa1032230:CDS | 40.0% | |
GTGGGCTTGGAATTTACTAT+TGG | - | chr7_1:67169678-67169697 | None:intergenic | 40.0% | |
ATTTCTGCAAGAACTGCCAA+AGG | + | chr7_1:67169838-67169857 | Msa1032230:CDS | 40.0% | |
ACGATGAGAAATGTTCCGAT+AGG | + | chr7_1:67169879-67169898 | Msa1032230:CDS | 40.0% | |
CAATACAGTCTCGTTATCCA+TGG | - | chr7_1:67170024-67170043 | None:intergenic | 40.0% | |
!! | TTCCATTGATTCGCAAAGAG+GGG | - | chr7_1:67170063-67170082 | None:intergenic | 40.0% |
!! | GATTCCATTGATTCGCAAAG+AGG | - | chr7_1:67170065-67170084 | None:intergenic | 40.0% |
! | TTGCATCAGCACTTCTTTTC+TGG | - | chr7_1:67170106-67170125 | None:intergenic | 40.0% |
TGTTACAGAAGATCCACACA+AGG | - | chr7_1:67170165-67170184 | None:intergenic | 40.0% | |
GGATCTTCTGTAACAAACAC+TGG | + | chr7_1:67170170-67170189 | Msa1032230:CDS | 40.0% | |
GTAACAAACACTGGCAATCA+AGG | + | chr7_1:67170179-67170198 | Msa1032230:CDS | 40.0% | |
! | AGTGTTATCCTGTTTCTCCA+TGG | + | chr7_1:67170240-67170259 | Msa1032230:CDS | 40.0% |
! | GTGTTATCCTGTTTCTCCAT+GGG | + | chr7_1:67170241-67170260 | Msa1032230:CDS | 40.0% |
TACTACCAATGAATCCAGGT+TGG | + | chr7_1:67170264-67170283 | Msa1032230:CDS | 40.0% | |
GAAGCAACATTATTCCAACC+TGG | - | chr7_1:67170281-67170300 | None:intergenic | 40.0% | |
ATTCCTGGAATTGCCAACAT+AGG | - | chr7_1:67170353-67170372 | None:intergenic | 40.0% | |
GATGCTGCTACAAGTTGTAA+AGG | - | chr7_1:67170392-67170411 | None:intergenic | 40.0% | |
AACTTGTAGCAGCATCACAT+TGG | + | chr7_1:67170396-67170415 | Msa1032230:CDS | 40.0% | |
! | CAACTGTTACTTGTAGAGGA+AGG | - | chr7_1:67170449-67170468 | None:intergenic | 40.0% |
ACCAAGAAGCCTAATGAAGA+AGG | + | chr7_1:67170626-67170645 | Msa1032230:CDS | 40.0% | |
TCCTTCTTCATTAGGCTTCT+TGG | - | chr7_1:67170630-67170649 | None:intergenic | 40.0% | |
! | CCGTCTTTTCCTTCTTCATT+AGG | - | chr7_1:67170638-67170657 | None:intergenic | 40.0% |
! | AGAAGGAAAAGACGGTGTTT+TGG | + | chr7_1:67170643-67170662 | Msa1032230:CDS | 40.0% |
! | GAAGGAAAAGACGGTGTTTT+GGG | + | chr7_1:67170644-67170663 | Msa1032230:CDS | 40.0% |
TTCTCATGCTCATACAATCC+AGG | + | chr7_1:67170703-67170722 | Msa1032230:CDS | 40.0% | |
GCTATTTGGTTGGAAGATTC+CGG | + | chr7_1:67168452-67168471 | Msa1032230:CDS | 40.0% | |
!!! | GGGTTGTTGAGATTTTTGGT+TGG | + | chr7_1:67168667-67168686 | Msa1032230:intron | 40.0% |
ACAAATTGTTCCGTAGAACC+CGG | + | chr7_1:67168802-67168821 | Msa1032230:intron | 40.0% | |
TTATAGTCCGGATTCAAACC+CGG | - | chr7_1:67168824-67168843 | None:intergenic | 40.0% | |
CTAGTAATCCAGAGTTTAGC+TGG | - | chr7_1:67168875-67168894 | None:intergenic | 40.0% | |
TCTGGATTACTAGAGAGTAG+AGG | + | chr7_1:67168882-67168901 | Msa1032230:intron | 40.0% | |
CTGGATTACTAGAGAGTAGA+GGG | + | chr7_1:67168883-67168902 | Msa1032230:intron | 40.0% | |
CTTGGATTGATGTGAACCAA+AGG | + | chr7_1:67169105-67169124 | Msa1032230:intron | 40.0% | |
AGGATCAAGACCAAATCCTT+TGG | - | chr7_1:67169124-67169143 | None:intergenic | 40.0% | |
! | TCTGAGATAAGCAGAAGTTG+AGG | + | chr7_1:67169297-67169316 | Msa1032230:intron | 40.0% |
CAGTACAAGGAAAACAGAAG+TGG | + | chr7_1:67169566-67169585 | Msa1032230:CDS | 40.0% | |
GTGGGCTTGGAATTTACTAT+TGG | - | chr7_1:67169678-67169697 | None:intergenic | 40.0% | |
ATTTCTGCAAGAACTGCCAA+AGG | + | chr7_1:67169838-67169857 | Msa1032230:CDS | 40.0% | |
ACGATGAGAAATGTTCCGAT+AGG | + | chr7_1:67169879-67169898 | Msa1032230:CDS | 40.0% | |
CAATACAGTCTCGTTATCCA+TGG | - | chr7_1:67170024-67170043 | None:intergenic | 40.0% | |
!! | TTCCATTGATTCGCAAAGAG+GGG | - | chr7_1:67170063-67170082 | None:intergenic | 40.0% |
!! | GATTCCATTGATTCGCAAAG+AGG | - | chr7_1:67170065-67170084 | None:intergenic | 40.0% |
! | TTGCATCAGCACTTCTTTTC+TGG | - | chr7_1:67170106-67170125 | None:intergenic | 40.0% |
TGTTACAGAAGATCCACACA+AGG | - | chr7_1:67170165-67170184 | None:intergenic | 40.0% | |
GGATCTTCTGTAACAAACAC+TGG | + | chr7_1:67170170-67170189 | Msa1032230:CDS | 40.0% | |
GTAACAAACACTGGCAATCA+AGG | + | chr7_1:67170179-67170198 | Msa1032230:CDS | 40.0% | |
! | AGTGTTATCCTGTTTCTCCA+TGG | + | chr7_1:67170240-67170259 | Msa1032230:CDS | 40.0% |
! | GTGTTATCCTGTTTCTCCAT+GGG | + | chr7_1:67170241-67170260 | Msa1032230:CDS | 40.0% |
TACTACCAATGAATCCAGGT+TGG | + | chr7_1:67170264-67170283 | Msa1032230:CDS | 40.0% | |
GAAGCAACATTATTCCAACC+TGG | - | chr7_1:67170281-67170300 | None:intergenic | 40.0% | |
ATTCCTGGAATTGCCAACAT+AGG | - | chr7_1:67170353-67170372 | None:intergenic | 40.0% | |
GATGCTGCTACAAGTTGTAA+AGG | - | chr7_1:67170392-67170411 | None:intergenic | 40.0% | |
AACTTGTAGCAGCATCACAT+TGG | + | chr7_1:67170396-67170415 | Msa1032230:CDS | 40.0% | |
! | CAACTGTTACTTGTAGAGGA+AGG | - | chr7_1:67170449-67170468 | None:intergenic | 40.0% |
ACCAAGAAGCCTAATGAAGA+AGG | + | chr7_1:67170626-67170645 | Msa1032230:CDS | 40.0% | |
TCCTTCTTCATTAGGCTTCT+TGG | - | chr7_1:67170630-67170649 | None:intergenic | 40.0% | |
! | CCGTCTTTTCCTTCTTCATT+AGG | - | chr7_1:67170638-67170657 | None:intergenic | 40.0% |
! | AGAAGGAAAAGACGGTGTTT+TGG | + | chr7_1:67170643-67170662 | Msa1032230:CDS | 40.0% |
! | GAAGGAAAAGACGGTGTTTT+GGG | + | chr7_1:67170644-67170663 | Msa1032230:CDS | 40.0% |
TTCTCATGCTCATACAATCC+AGG | + | chr7_1:67170703-67170722 | Msa1032230:CDS | 40.0% | |
! | GAACATGTCTGAGACTGAGA+AGG | + | chr7_1:67168416-67168435 | Msa1032230:CDS | 45.0% |
! | TCTGAGACTGAGAAGGATCA+TGG | + | chr7_1:67168423-67168442 | Msa1032230:CDS | 45.0% |
ATGTACCATGGGTCCAGAAT+TGG | - | chr7_1:67168499-67168518 | None:intergenic | 45.0% | |
CAAATTGTTCCGTAGAACCC+GGG | + | chr7_1:67168803-67168822 | Msa1032230:intron | 45.0% | |
TATAGTCCGGATTCAAACCC+GGG | - | chr7_1:67168823-67168842 | None:intergenic | 45.0% | |
CTTACTTCCCAGCTAAACTC+TGG | + | chr7_1:67168864-67168883 | Msa1032230:intron | 45.0% | |
AGGATACTTGCAGCAGTACA+AGG | + | chr7_1:67169553-67169572 | Msa1032230:intron | 45.0% | |
!!! | TGCTCGGTTTTTTCTGCACA+AGG | - | chr7_1:67169597-67169616 | None:intergenic | 45.0% |
TAACACGGAGACCGGTAATA+CGG | + | chr7_1:67169704-67169723 | Msa1032230:CDS | 45.0% | |
GGACACTGAACAATCTTGTC+TGG | - | chr7_1:67169753-67169772 | None:intergenic | 45.0% | |
CAGTTCTTGCAGAAATGTCG+AGG | - | chr7_1:67169834-67169853 | None:intergenic | 45.0% | |
! | GCAAGAACTGCCAAAGGTAT+TGG | + | chr7_1:67169844-67169863 | Msa1032230:CDS | 45.0% |
AGAAATGTTCCGATAGGTGC+TGG | + | chr7_1:67169885-67169904 | Msa1032230:CDS | 45.0% | |
GAAATGTTCCGATAGGTGCT+GGG | + | chr7_1:67169886-67169905 | Msa1032230:CDS | 45.0% | |
!! | GTTTGTAGTTTCTAGCCTCG+TGG | - | chr7_1:67169979-67169998 | None:intergenic | 45.0% |
TCTCGTTATCCATGGATGTG+TGG | - | chr7_1:67170016-67170035 | None:intergenic | 45.0% | |
TACCCCTCTTTGCGAATCAA+TGG | + | chr7_1:67170058-67170077 | Msa1032230:CDS | 45.0% | |
CAGTTCTGTGCAACATAGAG+AGG | + | chr7_1:67170133-67170152 | Msa1032230:CDS | 45.0% | |
ACAGAAGATCCACACAAGGA+CGG | - | chr7_1:67170161-67170180 | None:intergenic | 45.0% | |
! | GGATTCATTGGTAGTACCCA+TGG | - | chr7_1:67170260-67170279 | None:intergenic | 45.0% |
TGGGTACTACCAATGAATCC+AGG | + | chr7_1:67170260-67170279 | Msa1032230:CDS | 45.0% | |
ATGGTGTCCAACACCTATGT+TGG | + | chr7_1:67170337-67170356 | Msa1032230:CDS | 45.0% | |
GGAATTGCCAACATAGGTGT+TGG | - | chr7_1:67170347-67170366 | None:intergenic | 45.0% | |
ACACCTATGTTGGCAATTCC+AGG | + | chr7_1:67170347-67170366 | Msa1032230:CDS | 45.0% | |
! | CTGTTACTTGTAGAGGAAGG+CGG | - | chr7_1:67170446-67170465 | None:intergenic | 45.0% |
! | GCAGCAACTGTTACTTGTAG+AGG | - | chr7_1:67170453-67170472 | None:intergenic | 45.0% |
ACAAGTAACAGTTGCTGCTC+AGG | + | chr7_1:67170455-67170474 | Msa1032230:CDS | 45.0% | |
AACAGTTGCTGCTCAGGAAA+TGG | + | chr7_1:67170461-67170480 | Msa1032230:CDS | 45.0% | |
CTATTGTGCTTTCCTAGGGT+TGG | - | chr7_1:67170491-67170510 | None:intergenic | 45.0% | |
CAGTCTCGAAAAGTCCTATC+CGG | + | chr7_1:67170591-67170610 | Msa1032230:CDS | 45.0% | |
AGTCTCGAAAAGTCCTATCC+GGG | + | chr7_1:67170592-67170611 | Msa1032230:CDS | 45.0% | |
! | TCTTGGTAGCTAATGTAGCC+CGG | - | chr7_1:67170613-67170632 | None:intergenic | 45.0% |
! | TTTGGGTGGCTCTCAGATTT+TGG | + | chr7_1:67170661-67170680 | Msa1032230:CDS | 45.0% |
ATGAGAAATAGCTCCTGAGC+TGG | - | chr7_1:67170690-67170709 | None:intergenic | 45.0% | |
! | GAACATGTCTGAGACTGAGA+AGG | + | chr7_1:67168416-67168435 | Msa1032230:CDS | 45.0% |
! | TCTGAGACTGAGAAGGATCA+TGG | + | chr7_1:67168423-67168442 | Msa1032230:CDS | 45.0% |
ATGTACCATGGGTCCAGAAT+TGG | - | chr7_1:67168499-67168518 | None:intergenic | 45.0% | |
CAAATTGTTCCGTAGAACCC+GGG | + | chr7_1:67168803-67168822 | Msa1032230:intron | 45.0% | |
TATAGTCCGGATTCAAACCC+GGG | - | chr7_1:67168823-67168842 | None:intergenic | 45.0% | |
CTTACTTCCCAGCTAAACTC+TGG | + | chr7_1:67168864-67168883 | Msa1032230:intron | 45.0% | |
AGGATACTTGCAGCAGTACA+AGG | + | chr7_1:67169553-67169572 | Msa1032230:intron | 45.0% | |
!!! | TGCTCGGTTTTTTCTGCACA+AGG | - | chr7_1:67169597-67169616 | None:intergenic | 45.0% |
TAACACGGAGACCGGTAATA+CGG | + | chr7_1:67169704-67169723 | Msa1032230:CDS | 45.0% | |
GGACACTGAACAATCTTGTC+TGG | - | chr7_1:67169753-67169772 | None:intergenic | 45.0% | |
CAGTTCTTGCAGAAATGTCG+AGG | - | chr7_1:67169834-67169853 | None:intergenic | 45.0% | |
! | GCAAGAACTGCCAAAGGTAT+TGG | + | chr7_1:67169844-67169863 | Msa1032230:CDS | 45.0% |
AGAAATGTTCCGATAGGTGC+TGG | + | chr7_1:67169885-67169904 | Msa1032230:CDS | 45.0% | |
GAAATGTTCCGATAGGTGCT+GGG | + | chr7_1:67169886-67169905 | Msa1032230:CDS | 45.0% | |
!! | GTTTGTAGTTTCTAGCCTCG+TGG | - | chr7_1:67169979-67169998 | None:intergenic | 45.0% |
TCTCGTTATCCATGGATGTG+TGG | - | chr7_1:67170016-67170035 | None:intergenic | 45.0% | |
TACCCCTCTTTGCGAATCAA+TGG | + | chr7_1:67170058-67170077 | Msa1032230:CDS | 45.0% | |
CAGTTCTGTGCAACATAGAG+AGG | + | chr7_1:67170133-67170152 | Msa1032230:CDS | 45.0% | |
ACAGAAGATCCACACAAGGA+CGG | - | chr7_1:67170161-67170180 | None:intergenic | 45.0% | |
! | GGATTCATTGGTAGTACCCA+TGG | - | chr7_1:67170260-67170279 | None:intergenic | 45.0% |
TGGGTACTACCAATGAATCC+AGG | + | chr7_1:67170260-67170279 | Msa1032230:CDS | 45.0% | |
ATGGTGTCCAACACCTATGT+TGG | + | chr7_1:67170337-67170356 | Msa1032230:CDS | 45.0% | |
GGAATTGCCAACATAGGTGT+TGG | - | chr7_1:67170347-67170366 | None:intergenic | 45.0% | |
ACACCTATGTTGGCAATTCC+AGG | + | chr7_1:67170347-67170366 | Msa1032230:CDS | 45.0% | |
! | CTGTTACTTGTAGAGGAAGG+CGG | - | chr7_1:67170446-67170465 | None:intergenic | 45.0% |
! | GCAGCAACTGTTACTTGTAG+AGG | - | chr7_1:67170453-67170472 | None:intergenic | 45.0% |
ACAAGTAACAGTTGCTGCTC+AGG | + | chr7_1:67170455-67170474 | Msa1032230:CDS | 45.0% | |
AACAGTTGCTGCTCAGGAAA+TGG | + | chr7_1:67170461-67170480 | Msa1032230:CDS | 45.0% | |
CTATTGTGCTTTCCTAGGGT+TGG | - | chr7_1:67170491-67170510 | None:intergenic | 45.0% | |
CAGTCTCGAAAAGTCCTATC+CGG | + | chr7_1:67170591-67170610 | Msa1032230:CDS | 45.0% | |
AGTCTCGAAAAGTCCTATCC+GGG | + | chr7_1:67170592-67170611 | Msa1032230:CDS | 45.0% | |
! | TCTTGGTAGCTAATGTAGCC+CGG | - | chr7_1:67170613-67170632 | None:intergenic | 45.0% |
! | TTTGGGTGGCTCTCAGATTT+TGG | + | chr7_1:67170661-67170680 | Msa1032230:CDS | 45.0% |
ATGAGAAATAGCTCCTGAGC+TGG | - | chr7_1:67170690-67170709 | None:intergenic | 45.0% | |
TTGGCCGGAATTGGACATTC+CGG | - | chr7_1:67168480-67168499 | None:intergenic | 50.0% | |
TGTCCAATTCCGGCCAATTC+TGG | + | chr7_1:67168483-67168502 | Msa1032230:CDS | 50.0% | |
GGATTCAAACCCGGGTTCTA+CGG | - | chr7_1:67168815-67168834 | None:intergenic | 50.0% | |
GTAGAACCCGGGTTTGAATC+CGG | + | chr7_1:67168814-67168833 | Msa1032230:intron | 50.0% | |
CAAGCCCACCGAAGATAACA+CGG | + | chr7_1:67169689-67169708 | Msa1032230:CDS | 50.0% | |
GTCTCCGTGTTATCTTCGGT+GGG | - | chr7_1:67169696-67169715 | None:intergenic | 50.0% | |
ACCGAAGATAACACGGAGAC+CGG | + | chr7_1:67169696-67169715 | Msa1032230:CDS | 50.0% | |
ACCGGTCTCCGTGTTATCTT+CGG | - | chr7_1:67169700-67169719 | None:intergenic | 50.0% | |
!! | TGCCAAAGGTATTGGACTGC+TGG | + | chr7_1:67169852-67169871 | Msa1032230:CDS | 50.0% |
CACCAGCAGTCCAATACCTT+TGG | - | chr7_1:67169857-67169876 | None:intergenic | 50.0% | |
!! | CAAAGGTATTGGACTGCTGG+TGG | + | chr7_1:67169855-67169874 | Msa1032230:CDS | 50.0% |
AGCACCTAGCCTCTCAATAC+CGG | + | chr7_1:67169922-67169941 | Msa1032230:CDS | 50.0% | |
! | TTTGCCGGTATTGAGAGGCT+AGG | - | chr7_1:67169929-67169948 | None:intergenic | 50.0% |
!! | GTAGTTTCTAGCCTCGTGGT+TGG | - | chr7_1:67169975-67169994 | None:intergenic | 50.0% |
! | CATGGATGTGTGGTGGTGAT+CGG | - | chr7_1:67170006-67170025 | None:intergenic | 50.0% |
CGTTATCCATGGATGTGTGG+TGG | - | chr7_1:67170013-67170032 | None:intergenic | 50.0% | |
!! | GATTCGCAAAGAGGGGTATC+AGG | - | chr7_1:67170056-67170075 | None:intergenic | 50.0% |
GGTAGTACCCATGGAGAAAC+AGG | - | chr7_1:67170251-67170270 | None:intergenic | 50.0% | |
GGCAGCAATTCATCCGACTT+CGG | + | chr7_1:67170304-67170323 | Msa1032230:CDS | 50.0% | |
CATTGCATGGATGCCGAAGT+CGG | - | chr7_1:67170320-67170339 | None:intergenic | 50.0% | |
!! | AGGTGTTGGACACCATTGCA+TGG | - | chr7_1:67170333-67170352 | None:intergenic | 50.0% |
GTAGCAGCATCACATTGGAG+TGG | + | chr7_1:67170401-67170420 | Msa1032230:CDS | 50.0% | |
GTAGCTAATGTAGCCCGGAT+AGG | - | chr7_1:67170608-67170627 | None:intergenic | 50.0% | |
!! | GGAAAAGACGGTGTTTTGGG+TGG | + | chr7_1:67170647-67170666 | Msa1032230:CDS | 50.0% |
!! | CAGATTTTGGAAGCCAGCTC+AGG | + | chr7_1:67170674-67170693 | Msa1032230:CDS | 50.0% |
TTGGCCGGAATTGGACATTC+CGG | - | chr7_1:67168480-67168499 | None:intergenic | 50.0% | |
TGTCCAATTCCGGCCAATTC+TGG | + | chr7_1:67168483-67168502 | Msa1032230:CDS | 50.0% | |
GGATTCAAACCCGGGTTCTA+CGG | - | chr7_1:67168815-67168834 | None:intergenic | 50.0% | |
GTAGAACCCGGGTTTGAATC+CGG | + | chr7_1:67168814-67168833 | Msa1032230:intron | 50.0% | |
CAAGCCCACCGAAGATAACA+CGG | + | chr7_1:67169689-67169708 | Msa1032230:CDS | 50.0% | |
GTCTCCGTGTTATCTTCGGT+GGG | - | chr7_1:67169696-67169715 | None:intergenic | 50.0% | |
ACCGAAGATAACACGGAGAC+CGG | + | chr7_1:67169696-67169715 | Msa1032230:CDS | 50.0% | |
ACCGGTCTCCGTGTTATCTT+CGG | - | chr7_1:67169700-67169719 | None:intergenic | 50.0% | |
!! | TGCCAAAGGTATTGGACTGC+TGG | + | chr7_1:67169852-67169871 | Msa1032230:CDS | 50.0% |
CACCAGCAGTCCAATACCTT+TGG | - | chr7_1:67169857-67169876 | None:intergenic | 50.0% | |
!! | CAAAGGTATTGGACTGCTGG+TGG | + | chr7_1:67169855-67169874 | Msa1032230:CDS | 50.0% |
AGCACCTAGCCTCTCAATAC+CGG | + | chr7_1:67169922-67169941 | Msa1032230:CDS | 50.0% | |
! | TTTGCCGGTATTGAGAGGCT+AGG | - | chr7_1:67169929-67169948 | None:intergenic | 50.0% |
!! | GTAGTTTCTAGCCTCGTGGT+TGG | - | chr7_1:67169975-67169994 | None:intergenic | 50.0% |
! | CATGGATGTGTGGTGGTGAT+CGG | - | chr7_1:67170006-67170025 | None:intergenic | 50.0% |
CGTTATCCATGGATGTGTGG+TGG | - | chr7_1:67170013-67170032 | None:intergenic | 50.0% | |
!! | GATTCGCAAAGAGGGGTATC+AGG | - | chr7_1:67170056-67170075 | None:intergenic | 50.0% |
GGTAGTACCCATGGAGAAAC+AGG | - | chr7_1:67170251-67170270 | None:intergenic | 50.0% | |
GGCAGCAATTCATCCGACTT+CGG | + | chr7_1:67170304-67170323 | Msa1032230:CDS | 50.0% | |
CATTGCATGGATGCCGAAGT+CGG | - | chr7_1:67170320-67170339 | None:intergenic | 50.0% | |
!! | AGGTGTTGGACACCATTGCA+TGG | - | chr7_1:67170333-67170352 | None:intergenic | 50.0% |
GTAGCAGCATCACATTGGAG+TGG | + | chr7_1:67170401-67170420 | Msa1032230:CDS | 50.0% | |
GTAGCTAATGTAGCCCGGAT+AGG | - | chr7_1:67170608-67170627 | None:intergenic | 50.0% | |
!! | GGAAAAGACGGTGTTTTGGG+TGG | + | chr7_1:67170647-67170666 | Msa1032230:CDS | 50.0% |
!! | CAGATTTTGGAAGCCAGCTC+AGG | + | chr7_1:67170674-67170693 | Msa1032230:CDS | 50.0% |
TGGTTGGAAGATTCCGGTGC+CGG | + | chr7_1:67168458-67168477 | Msa1032230:CDS | 55.0% | |
GGAATTGGACATTCCGGCAC+CGG | - | chr7_1:67168474-67168493 | None:intergenic | 55.0% | |
! | GGTGCCGGAATGTCCAATTC+CGG | + | chr7_1:67168473-67168492 | Msa1032230:CDS | 55.0% |
GGTCCAGAATTGGCCGGAAT+TGG | - | chr7_1:67168489-67168508 | None:intergenic | 55.0% | |
ACCATGGGTCCAGAATTGGC+CGG | - | chr7_1:67168495-67168514 | None:intergenic | 55.0% | |
! | CGTGTTATCTTCGGTGGGCT+TGG | - | chr7_1:67169691-67169710 | None:intergenic | 55.0% |
GGTCTCCGTGTTATCTTCGG+TGG | - | chr7_1:67169697-67169716 | None:intergenic | 55.0% | |
AGTGTCCGCGATGCAACAGT+TGG | + | chr7_1:67169766-67169785 | Msa1032230:CDS | 55.0% | |
GTGTCCGCGATGCAACAGTT+GGG | + | chr7_1:67169767-67169786 | Msa1032230:CDS | 55.0% | |
GTGTCCCAACTGTTGCATCG+CGG | - | chr7_1:67169774-67169793 | None:intergenic | 55.0% | |
!! | ATGTTCCGATAGGTGCTGGG+AGG | + | chr7_1:67169889-67169908 | Msa1032230:CDS | 55.0% |
CGTGGTTGGAACTCCATTCG+TGG | - | chr7_1:67169961-67169980 | None:intergenic | 55.0% | |
CGAATGGAGTTCCAACCACG+AGG | + | chr7_1:67169961-67169980 | Msa1032230:CDS | 55.0% | |
CGATCACCACCACACATCCA+TGG | + | chr7_1:67170004-67170023 | Msa1032230:CDS | 55.0% | |
AGAGAGGAACCGTCCTTGTG+TGG | + | chr7_1:67170149-67170168 | Msa1032230:CDS | 55.0% | |
CGACTTCGGCATCCATGCAA+TGG | + | chr7_1:67170318-67170337 | Msa1032230:CDS | 55.0% | |
GGAAATGGCTCACCAACCCT+AGG | + | chr7_1:67170476-67170495 | Msa1032230:CDS | 55.0% | |
TGGTTGGAAGATTCCGGTGC+CGG | + | chr7_1:67168458-67168477 | Msa1032230:CDS | 55.0% | |
GGAATTGGACATTCCGGCAC+CGG | - | chr7_1:67168474-67168493 | None:intergenic | 55.0% | |
! | GGTGCCGGAATGTCCAATTC+CGG | + | chr7_1:67168473-67168492 | Msa1032230:CDS | 55.0% |
GGTCCAGAATTGGCCGGAAT+TGG | - | chr7_1:67168489-67168508 | None:intergenic | 55.0% | |
ACCATGGGTCCAGAATTGGC+CGG | - | chr7_1:67168495-67168514 | None:intergenic | 55.0% | |
! | CGTGTTATCTTCGGTGGGCT+TGG | - | chr7_1:67169691-67169710 | None:intergenic | 55.0% |
GGTCTCCGTGTTATCTTCGG+TGG | - | chr7_1:67169697-67169716 | None:intergenic | 55.0% | |
AGTGTCCGCGATGCAACAGT+TGG | + | chr7_1:67169766-67169785 | Msa1032230:CDS | 55.0% | |
GTGTCCGCGATGCAACAGTT+GGG | + | chr7_1:67169767-67169786 | Msa1032230:CDS | 55.0% | |
GTGTCCCAACTGTTGCATCG+CGG | - | chr7_1:67169774-67169793 | None:intergenic | 55.0% | |
!! | ATGTTCCGATAGGTGCTGGG+AGG | + | chr7_1:67169889-67169908 | Msa1032230:CDS | 55.0% |
CGTGGTTGGAACTCCATTCG+TGG | - | chr7_1:67169961-67169980 | None:intergenic | 55.0% | |
CGAATGGAGTTCCAACCACG+AGG | + | chr7_1:67169961-67169980 | Msa1032230:CDS | 55.0% | |
CGATCACCACCACACATCCA+TGG | + | chr7_1:67170004-67170023 | Msa1032230:CDS | 55.0% | |
AGAGAGGAACCGTCCTTGTG+TGG | + | chr7_1:67170149-67170168 | Msa1032230:CDS | 55.0% | |
CGACTTCGGCATCCATGCAA+TGG | + | chr7_1:67170318-67170337 | Msa1032230:CDS | 55.0% | |
GGAAATGGCTCACCAACCCT+AGG | + | chr7_1:67170476-67170495 | Msa1032230:CDS | 55.0% | |
TCCGGCCAATTCTGGACCCA+TGG | + | chr7_1:67168491-67168510 | Msa1032230:CDS | 60.0% | |
!! | TTCCGATAGGTGCTGGGAGG+CGG | + | chr7_1:67169892-67169911 | Msa1032230:CDS | 60.0% |
TTCCGCCTCCCAGCACCTAT+CGG | - | chr7_1:67169897-67169916 | None:intergenic | 60.0% | |
TTGTAGAGGAAGGCGGCGAG+AGG | - | chr7_1:67170439-67170458 | None:intergenic | 60.0% | |
TCCGGCCAATTCTGGACCCA+TGG | + | chr7_1:67168491-67168510 | Msa1032230:CDS | 60.0% | |
!! | TTCCGATAGGTGCTGGGAGG+CGG | + | chr7_1:67169892-67169911 | Msa1032230:CDS | 60.0% |
TTCCGCCTCCCAGCACCTAT+CGG | - | chr7_1:67169897-67169916 | None:intergenic | 60.0% | |
TTGTAGAGGAAGGCGGCGAG+AGG | - | chr7_1:67170439-67170458 | None:intergenic | 60.0% | |
GGCGGCGAGAGGCAAAGTGA+TGG | - | chr7_1:67170428-67170447 | None:intergenic | 65.0% | |
GGCGGCGAGAGGCAAAGTGA+TGG | - | chr7_1:67170428-67170447 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_1 | gene | 67168302 | 67170736 | 67168302 | ID=Msa1032230;Name=Msa1032230 |
chr7_1 | mRNA | 67168302 | 67170736 | 67168302 | ID=Msa1032230-mRNA-1;Parent=Msa1032230;Name=Msa1032230-mRNA-1;_AED=0.00;_eAED=0.00;_QI=112|1|0.5|1|1|1|2|0|426 |
chr7_1 | exon | 67168302 | 67168512 | 67168302 | ID=Msa1032230-mRNA-1:exon:15305;Parent=Msa1032230-mRNA-1 |
chr7_1 | exon | 67169555 | 67170736 | 67169555 | ID=Msa1032230-mRNA-1:exon:15306;Parent=Msa1032230-mRNA-1 |
chr7_1 | five_prime_UTR | 67168302 | 67168413 | 67168302 | ID=Msa1032230-mRNA-1:five_prime_utr;Parent=Msa1032230-mRNA-1 |
chr7_1 | CDS | 67168414 | 67168512 | 67168414 | ID=Msa1032230-mRNA-1:cds;Parent=Msa1032230-mRNA-1 |
chr7_1 | CDS | 67169555 | 67170736 | 67169555 | ID=Msa1032230-mRNA-1:cds;Parent=Msa1032230-mRNA-1 |
Gene Sequence |
Protein sequence |