AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1118280

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1118280 MtrunA17_Chr7g0254161 95.775 426 16 1 1 426 1 424 0.0 845
Msa1118280 MtrunA17_Chr6g0460731 50.267 374 139 9 8 350 10 367 4.61e-106 318
Msa1118280 MtrunA17_Chr6g0460721 46.939 343 143 9 8 335 10 328 6.57e-92 280
Msa1118280 MtrunA17_Chr6g0453321 34.545 495 223 17 8 425 5 475 2.76e-62 209
Msa1118280 MtrunA17_Chr8g0355261 33.051 472 226 15 5 426 8 439 3.44e-54 186
Msa1118280 MtrunA17_Chr7g0217581 35.811 444 204 15 38 425 164 582 7.72e-53 186
Msa1118280 MtrunA17_Chr4g0042481 31.633 490 231 16 8 424 5 463 1.10e-51 180
Msa1118280 MtrunA17_Chr3g0092111 34.358 358 187 8 83 421 116 444 7.99e-51 178
Msa1118280 MtrunA17_Chr2g0283811 56.000 100 37 1 97 196 41 133 3.92e-32 119
Msa1118280 MtrunA17_Chr5g0417571 65.116 86 24 1 86 165 121 206 1.04e-31 123
Msa1118280 MtrunA17_Chr5g0417551 31.594 345 127 15 97 426 121 371 3.21e-31 122
Msa1118280 MtrunA17_Chr5g0417561 29.825 342 137 11 97 426 113 363 7.71e-31 121
Msa1118280 MtrunA17_Chr5g0417601 69.014 71 22 0 86 156 123 193 2.96e-28 114
Msa1118280 MtrunA17_Chr8g0367161 51.807 83 39 1 77 158 5 87 7.34e-25 104
Msa1118280 MtrunA17_Chr8g0346551 44.444 117 60 3 98 213 19 131 8.48e-25 102
Msa1118280 MtrunA17_Chr3g0127201 55.556 81 30 1 77 157 7 81 8.77e-25 103
Msa1118280 MtrunA17_Chr8g0374251 57.534 73 31 0 103 175 68 140 1.60e-24 103
Msa1118280 MtrunA17_Chr4g0010151 65.517 58 20 0 99 156 78 135 5.71e-24 102
Msa1118280 MtrunA17_Chr8g0374111 38.462 130 55 3 58 187 3 107 5.74e-24 99.8
Msa1118280 MtrunA17_Chr2g0308011 73.469 49 13 0 103 151 37 85 6.00e-24 99.0
Msa1118280 MtrunA17_Chr2g0326001 66.102 59 20 0 98 156 35 93 1.18e-23 100
Msa1118280 MtrunA17_Chr2g0328021 56.000 75 33 0 82 156 41 115 1.51e-23 99.8
Msa1118280 MtrunA17_Chr4g0031411 37.903 124 74 2 90 211 60 182 2.93e-23 99.8
Msa1118280 MtrunA17_Chr4g0047001 70.909 55 16 0 104 158 56 110 3.71e-23 100
Msa1118280 MtrunA17_Chr8g0341671 69.231 52 16 0 103 154 20 71 4.31e-23 96.7
Msa1118280 MtrunA17_Chr4g0061761 67.925 53 17 0 101 153 38 90 6.55e-23 98.6
Msa1118280 MtrunA17_Chr1g0188851 51.899 79 33 1 82 155 17 95 1.98e-22 96.7
Msa1118280 MtrunA17_Chr4g0030051 62.121 66 24 1 91 155 28 93 2.07e-22 96.7
Msa1118280 MtrunA17_Chr2g0282441 59.375 64 26 0 91 154 13 76 2.52e-22 97.4
Msa1118280 MtrunA17_Chr7g0237921 38.760 129 66 2 91 217 62 179 3.22e-22 97.1
Msa1118280 MtrunA17_Chr7g0223311 69.231 52 16 0 104 155 78 129 1.84e-21 95.5
Msa1118280 MtrunA17_Chr5g0411951 65.455 55 19 0 99 153 39 93 1.87e-21 94.7
Msa1118280 MtrunA17_Chr2g0282051 67.857 56 17 1 103 158 46 100 2.25e-21 93.2
Msa1118280 MtrunA17_Chr3g0126201 67.308 52 17 0 105 156 53 104 3.90e-21 94.0
Msa1118280 MtrunA17_Chr2g0282511 69.388 49 15 0 103 151 45 93 6.00e-21 92.8
Msa1118280 MtrunA17_Chr1g0177251 67.308 52 17 0 105 156 14 65 7.18e-21 92.0
Msa1118280 MtrunA17_Chr4g0047761 66.071 56 18 1 103 158 72 126 7.58e-21 92.8
Msa1118280 MtrunA17_Chr3g0117601 58.065 62 25 1 93 153 50 111 2.24e-20 91.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1118280 AT5G39660.3 37.097 372 176 15 40 393 77 408 1.70e-51 180
Msa1118280 AT5G39660.1 37.097 372 176 15 40 393 77 408 1.70e-51 180
Msa1118280 AT5G39660.2 37.097 372 176 15 40 393 77 408 1.70e-51 180
Msa1118280 AT3G47500.1 31.546 485 234 15 3 426 1 448 7.99e-50 175
Msa1118280 AT5G62430.1 42.424 198 65 5 82 277 33 183 1.76e-37 138
Msa1118280 AT1G26790.1 45.143 175 88 5 1 169 5 177 1.78e-34 132
Msa1118280 AT1G29160.1 81.667 60 11 0 97 156 56 115 8.37e-33 122
Msa1118280 AT2G34140.1 64.198 81 29 0 97 177 52 132 1.47e-32 121
Msa1118280 AT1G69570.1 65.823 79 27 0 91 169 120 198 4.08e-32 126
Msa1118280 AT3G55370.1 57.143 70 30 0 99 168 72 141 8.91e-25 104
Msa1118280 AT3G55370.2 57.143 70 30 0 99 168 72 141 1.13e-24 104
Msa1118280 AT3G55370.3 57.143 70 30 0 99 168 117 186 1.71e-24 104
Msa1118280 AT5G60850.1 54.762 84 32 2 103 186 51 128 2.65e-24 102
Msa1118280 AT5G60200.1 56.338 71 31 0 99 169 51 121 4.25e-24 100
Msa1118280 AT1G51700.1 69.231 52 16 0 103 154 33 84 4.74e-24 99.4
Msa1118280 AT4G24060.1 44.444 117 60 2 100 214 50 163 1.26e-23 101
Msa1118280 AT3G61850.2 64.407 59 21 0 98 156 57 115 1.62e-23 100
Msa1118280 AT3G61850.3 64.407 59 21 0 98 156 57 115 1.62e-23 100
Msa1118280 AT3G61850.1 64.407 59 21 0 98 156 69 127 2.05e-23 100
Msa1118280 AT3G61850.5 64.407 59 21 0 98 156 57 115 2.47e-23 100
Msa1118280 AT2G28810.2 66.071 56 19 0 99 154 73 128 2.69e-23 100
Msa1118280 AT3G61850.4 64.407 59 21 0 98 156 69 127 3.39e-23 100
Msa1118280 AT3G21270.1 69.811 53 16 0 103 155 29 81 3.58e-23 97.1
Msa1118280 AT2G28810.1 66.071 56 19 0 99 154 90 145 4.72e-23 99.8
Msa1118280 AT2G37590.1 63.793 58 21 0 99 156 85 142 5.47e-23 99.4
Msa1118280 AT3G45610.1 52.857 70 33 0 99 168 36 105 5.85e-23 97.4
Msa1118280 AT1G07640.1 69.091 55 16 1 103 156 21 75 1.17e-22 97.4
Msa1118280 AT1G07640.2 69.091 55 16 1 103 156 77 131 1.61e-22 98.2
Msa1118280 AT1G28310.1 68.519 54 17 0 103 156 27 80 2.12e-22 97.4
Msa1118280 AT1G07640.3 69.091 55 16 1 103 156 85 139 2.13e-22 97.8
Msa1118280 AT4G00940.1 56.944 72 27 1 91 158 52 123 2.20e-22 97.1
Msa1118280 AT4G00940.3 56.944 72 27 1 91 158 52 123 2.20e-22 97.1
Msa1118280 AT4G00940.2 56.944 72 27 1 91 158 52 123 2.20e-22 97.1
Msa1118280 AT5G65590.1 70.370 54 16 0 103 156 41 94 2.46e-22 97.4
Msa1118280 AT1G28310.2 68.519 54 17 0 103 156 51 104 3.11e-22 97.4
Msa1118280 AT5G02460.1 44.898 98 53 1 99 195 91 188 4.16e-22 97.8
Msa1118280 AT1G64620.1 65.385 52 18 0 100 151 46 97 5.67e-22 97.1
Msa1118280 AT3G50410.1 70.588 51 15 0 105 155 32 82 5.85e-22 95.1
Msa1118280 AT5G66940.1 50.000 80 33 1 90 169 26 98 7.80e-22 94.0
Msa1118280 AT4G38000.1 66.071 56 18 1 102 156 40 95 8.18e-22 94.4
Msa1118280 AT2G28510.1 66.071 56 19 0 105 160 50 105 1.55e-21 94.4
Msa1118280 AT4G21050.1 40.800 125 59 3 76 198 4 115 2.85e-21 92.0
Msa1118280 AT3G52440.1 65.385 52 18 0 105 156 27 78 1.17e-20 91.3
Msa1118280 AT2G46590.1 62.264 53 20 0 98 150 63 115 1.23e-20 93.2
Msa1118280 AT2G46590.2 62.264 53 20 0 98 150 75 127 1.44e-20 93.2
Msa1118280 AT3G52440.2 65.385 52 18 0 105 156 46 97 1.49e-20 91.3
Msa1118280 AT1G21340.1 66.000 50 17 0 105 154 40 89 3.28e-20 90.1
Msa1118280 AT1G47655.1 70.213 47 14 0 105 151 31 77 3.55e-20 89.0
Msa1118280 AT5G62940.1 57.812 64 26 1 91 153 60 123 8.61e-20 90.9
Msa1118280 AT4G21040.1 63.462 52 19 0 105 156 27 78 6.48e-18 82.8
Msa1118280 AT4G21080.1 57.895 57 24 0 105 161 27 83 2.19e-17 81.6
Msa1118280 AT4G21030.1 59.091 44 18 0 105 148 23 66 2.62e-11 63.2

Find 117 sgRNAs with CRISPR-Local

Find 360 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTTCTTCATTAGGCTTCT+TGG 0.163517 7_3:+66862629 None:intergenic
TTTGGGTGGCTCTCAGATTT+TGG 0.205376 7_3:-66862595 Msa1118280:CDS
GATCATGGTATTATGCTATT+TGG 0.221788 7_3:-66864799 Msa1118280:CDS
AACGAGACTGTATTGAAATT+TGG 0.235896 7_3:-66863227 Msa1118280:CDS
TGTCCAATTCCGGCCAATTC+TGG 0.261036 7_3:-66864754 Msa1118280:CDS
TACTTCATTTCCTTGATTGC+CGG 0.302888 7_3:+66863067 None:intergenic
AAAATTATTATATGCTTTCC+TGG 0.315121 7_3:+66862535 None:intergenic
TATCTCTATTGTGCTTTCCT+AGG 0.318213 7_3:+66862763 None:intergenic
GTGGGCTTGGAATTTACTAT+TGG 0.321756 7_3:+66863581 None:intergenic
GGTCCAGAATTGGCCGGAAT+TGG 0.321957 7_3:+66864751 None:intergenic
CGTGTTATCTTCGGTGGGCT+TGG 0.325634 7_3:+66863568 None:intergenic
GCTATTTGGTTGGAAGATTC+CGG 0.345460 7_3:-66864785 Msa1118280:CDS
GATTCGTAAAGAGGGGTATC+AGG 0.378052 7_3:+66863203 None:intergenic
GCAAGAACTGCCAAAGGTAT+TGG 0.383831 7_3:-66863412 Msa1118280:CDS
AGAAGGAAAAGACGGTGTTT+TGG 0.384688 7_3:-66862613 Msa1118280:CDS
ACACCTATGTTGGCAATTCC+AGG 0.386307 7_3:-66862909 Msa1118280:CDS
TTTATCTTGATCCGTATTAC+CGG 0.399758 7_3:+66863541 None:intergenic
GGTAGTACCCATGGAGAAAC+AGG 0.400241 7_3:+66863008 None:intergenic
TTGGAATAATGTTGCTTCAA+TGG 0.402306 7_3:-66862973 Msa1118280:CDS
TTATTCCAACCTGGATTCAT+TGG 0.406197 7_3:+66862987 None:intergenic
AGACAATTCTTCTGATTCAA+TGG 0.409932 7_3:-66863636 Msa1118280:CDS
TTGGCCGGAATTGGACATTC+CGG 0.413804 7_3:+66864760 None:intergenic
CACCAGCAGTCCAATACCTT+TGG 0.414239 7_3:+66863402 None:intergenic
CAGAACGCAATGCATCAAAT+TGG 0.417701 7_3:-66863043 Msa1118280:CDS
TCGTGGTTACTATAATTTGC+CGG 0.419212 7_3:+66863315 None:intergenic
ACAAGTAACAGTTGCTGCTC+AGG 0.422483 7_3:-66862801 Msa1118280:CDS
ATCTCTATTGTGCTTTCCTA+GGG 0.423915 7_3:+66862764 None:intergenic
GGACACTGAACAATCTTGTC+TGG 0.427093 7_3:+66863506 None:intergenic
AACAGTTGCTGCTCAGGAAA+TGG 0.428682 7_3:-66862795 Msa1118280:CDS
CTATTGTGCTTTCCTAGGGT+TGG 0.437965 7_3:+66862768 None:intergenic
TAAAACAGACAAGTGTGTTC+CGG 0.446244 7_3:-66862721 Msa1118280:CDS
CAGTCTCGAAAAGTCCTATC+CGG 0.447133 7_3:-66862665 Msa1118280:CDS
ATGTACCATGGGTCCAGAAT+TGG 0.447645 7_3:+66864741 None:intergenic
ACCGGTCTCCGTGTTATCTT+CGG 0.448248 7_3:+66863559 None:intergenic
TTCCGATAGGTGCTGGGAGG+CGG 0.450898 7_3:-66863364 Msa1118280:CDS
AGAAATGTTCCGATAGGTGC+TGG 0.459160 7_3:-66863371 Msa1118280:CDS
ATGGTATTATGCTATTTGGT+TGG 0.461686 7_3:-66864795 Msa1118280:CDS
TGGTTGGAAGATTCCGGTGC+CGG 0.462466 7_3:-66864779 Msa1118280:CDS
ACAAGAGTCTATACCAGAAA+AGG 0.468668 7_3:-66863606 Msa1118280:CDS
TAACACGGAGACCGGTAATA+CGG 0.475853 7_3:-66863552 Msa1118280:CDS
GGTGCCGGAATGTCCAATTC+CGG 0.477329 7_3:-66864764 Msa1118280:CDS
GTGTTATCCTGTTTCTCCAT+GGG 0.479488 7_3:-66863015 Msa1118280:CDS
TACCCCTCTTTACGAATCAA+TGG 0.484142 7_3:-66863198 Msa1118280:CDS
AGGATACTTGCAGCAGTACA+AGG 0.490268 7_3:-66863703 Msa1118280:CDS
GTAACAAACACCGGCAATCA+AGG 0.493046 7_3:-66863077 Msa1118280:CDS
AGTGTTATCCTGTTTCTCCA+TGG 0.495037 7_3:-66863016 Msa1118280:CDS
GGAATTGGACATTCCGGCAC+CGG 0.499395 7_3:+66864766 None:intergenic
TGCCAAAGGTATTGGACTGC+TGG 0.503181 7_3:-66863404 Msa1118280:CDS
ACCAAGAAGCCTAATGAAGA+AGG 0.504636 7_3:-66862630 Msa1118280:CDS
GTCTCCGTGTTATCTTCGGT+GGG 0.507024 7_3:+66863563 None:intergenic
AGAAGAATTGTCTTGTTGCT+CGG 0.510082 7_3:+66863646 None:intergenic
AGCACCTAGCCTCTCAATAC+CGG 0.512664 7_3:-66863334 Msa1118280:CDS
CGTGGTTGGAACTCCATTCG+TGG 0.513560 7_3:+66863298 None:intergenic
GATTCCATTGATTCGTAAAG+AGG 0.514441 7_3:+66863194 None:intergenic
TTCTCATGCTCATACAATCC+AGG 0.520401 7_3:-66862553 Msa1118280:CDS
CAATACAGTCTCGTTATCCA+TGG 0.528405 7_3:+66863235 None:intergenic
TTCCGCCTCCCAGCACCTAT+CGG 0.529039 7_3:+66863362 None:intergenic
GTAGTTTCTAGCCTCGTGGT+TGG 0.531644 7_3:+66863284 None:intergenic
TATAATTTGCCGGTATTGAG+AGG 0.538214 7_3:+66863325 None:intergenic
ACCGAAGATAACACGGAGAC+CGG 0.539518 7_3:-66863560 Msa1118280:CDS
GGAATTGCCAACATAGGTGT+TGG 0.540068 7_3:+66862912 None:intergenic
GTGTCCGCGATGCAACAGTT+GGG 0.540349 7_3:-66863489 Msa1118280:CDS
GTTGTTGAAATAACAAAACT+TGG 0.540457 7_3:+66863463 None:intergenic
ATTCCATTGATTCGTAAAGA+GGG 0.545028 7_3:+66863195 None:intergenic
CGATCACCACCACACATCCA+TGG 0.550071 7_3:-66863252 Msa1118280:CDS
GGATTCATTGGTAGTACCCA+TGG 0.554215 7_3:+66862999 None:intergenic
GTAGCTAATGTAGCCCGGAT+AGG 0.554980 7_3:+66862651 None:intergenic
GGTCTCCGTGTTATCTTCGG+TGG 0.555105 7_3:+66863562 None:intergenic
ATGAGAAATAGCTCCTGAGC+TGG 0.556629 7_3:+66862569 None:intergenic
CATGGATGTGTGGTGGTGAT+CGG 0.559985 7_3:+66863253 None:intergenic
GGAAATGGCTCACCAACCCT+AGG 0.561749 7_3:-66862780 Msa1118280:CDS
TCTCAGACTGAGAAGGATCA+TGG 0.563095 7_3:-66864814 Msa1118280:CDS
CAGTTCTTGCAGAAATGTCG+AGG 0.563164 7_3:+66863425 None:intergenic
CGACTTCGGCATCCATGCAA+TGG 0.568776 7_3:-66862938 Msa1118280:CDS
TCTTGGTAGCTAATGTAGCC+CGG 0.573000 7_3:+66862646 None:intergenic
AACTTGTAGCAGCATCACAT+TGG 0.575411 7_3:-66862860 Msa1118280:CDS
AGTGTCCGCGATGCAACAGT+TGG 0.576096 7_3:-66863490 Msa1118280:CDS
GGCAGCAGTTCATCCGACTT+CGG 0.576744 7_3:-66862952 Msa1118280:CDS
CAAATTATAGTAACCACGAA+TGG 0.580675 7_3:-66863311 Msa1118280:CDS
TCCGGCCAATTCTGGACCCA+TGG 0.581876 7_3:-66864746 Msa1118280:intron
GCAGCAACTGTTACTTGTAG+AGG 0.584099 7_3:+66862806 None:intergenic
TGGGTACTACCAATGAATCC+AGG 0.586175 7_3:-66862996 Msa1118280:CDS
CATTGCATGGATGCCGAAGT+CGG 0.595329 7_3:+66862939 None:intergenic
AGTCTCGAAAAGTCCTATCC+GGG 0.597281 7_3:-66862664 Msa1118280:CDS
ATTCCTGGAATTGCCAACAT+AGG 0.597632 7_3:+66862906 None:intergenic
AGAGAGGAACCGTCCTTGTG+TGG 0.598119 7_3:-66863107 Msa1118280:CDS
TACTACCAATGAATCCAGGT+TGG 0.601762 7_3:-66862992 Msa1118280:CDS
CAGTTCTGTGCAACATAGAG+AGG 0.603480 7_3:-66863123 Msa1118280:CDS
CCTAATGAAGAAGGAAAAGA+CGG 0.611817 7_3:-66862621 Msa1118280:CDS
GAAATGTTCCGATAGGTGCT+GGG 0.612734 7_3:-66863370 Msa1118280:CDS
GGCGGCGAGAGGCAAAGTGA+TGG 0.613227 7_3:+66862831 None:intergenic
GATGCTGCTACAAGTTGTAA+AGG 0.617256 7_3:+66862867 None:intergenic
CAGTACAAGGAAAACAGAAG+TGG 0.617838 7_3:-66863690 Msa1118280:CDS
TTCCATTGATTCGTAAAGAG+GGG 0.618009 7_3:+66863196 None:intergenic
GAAGCAACATTATTCCAACC+TGG 0.621410 7_3:+66862978 None:intergenic
CAAAGGTATTGGACTGCTGG+TGG 0.623552 7_3:-66863401 Msa1118280:CDS
GAACATGTCTCAGACTGAGA+AGG 0.623598 7_3:-66864821 Msa1118280:CDS
CAAGCCCACCGAAGATAACA+CGG 0.626181 7_3:-66863567 Msa1118280:CDS
TTGTAGAGGAAGGCGGCGAG+AGG 0.626239 7_3:+66862820 None:intergenic
TTTGCCGGTATTGAGAGGCT+AGG 0.626885 7_3:+66863330 None:intergenic
ATGGTGTCCAACACCTATGT+TGG 0.630522 7_3:-66862919 Msa1118280:CDS
CAACTGTTACTTGTAGAGGA+AGG 0.635921 7_3:+66862810 None:intergenic
GTTTGTAGTTTCTAGCCTCG+TGG 0.637790 7_3:+66863280 None:intergenic
AGGTGTTGGACACCATTGCA+TGG 0.641634 7_3:+66862926 None:intergenic
ACGATGAGAAATGTTCCGAT+AGG 0.643759 7_3:-66863377 Msa1118280:CDS
GGATCTTCTGTAACAAACAC+CGG 0.647048 7_3:-66863086 Msa1118280:CDS
CGTTATCCATGGATGTGTGG+TGG 0.660626 7_3:+66863246 None:intergenic
ATTTCTGCAAGAACTGCCAA+AGG 0.665461 7_3:-66863418 Msa1118280:CDS
ACAGAAGATCCACACAAGGA+CGG 0.669016 7_3:+66863098 None:intergenic
ACCATGGGTCCAGAATTGGC+CGG 0.674302 7_3:+66864745 None:intergenic
GTAGCAGCATCACATTGGAG+TGG 0.674545 7_3:-66862855 Msa1118280:CDS
CTGTTACTTGTAGAGGAAGG+CGG 0.676133 7_3:+66862813 None:intergenic
TCTCGTTATCCATGGATGTG+TGG 0.680622 7_3:+66863243 None:intergenic
CGAATGGAGTTCCAACCACG+AGG 0.695228 7_3:-66863295 Msa1118280:CDS
GTGTCCCAACTGTTGCATCG+CGG 0.715720 7_3:+66863485 None:intergenic
TGTTACAGAAGATCCACACA+AGG 0.727736 7_3:+66863094 None:intergenic
ATGTTCCGATAGGTGCTGGG+AGG 0.729596 7_3:-66863367 Msa1118280:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTTTGTTTGTTTTCTTA+TGG - chr7_3:66862884-66862903 Msa1118280:CDS 15.0%
!!! TATTTTGTTTGTTTTCTTAT+GGG - chr7_3:66862885-66862904 Msa1118280:CDS 15.0%
!!! AAATTGATTTTTGTAATTCT+TGG - chr7_3:66863307-66863326 Msa1118280:CDS 15.0%
!!! TAATTTGTGGTTTAAATTTT+AGG - chr7_3:66863753-66863772 Msa1118280:intron 15.0%
!!! TTATTTTGTTTGTTTTCTTA+TGG - chr7_3:66862884-66862903 Msa1118280:CDS 15.0%
!!! TATTTTGTTTGTTTTCTTAT+GGG - chr7_3:66862885-66862904 Msa1118280:CDS 15.0%
!!! AAATTGATTTTTGTAATTCT+TGG - chr7_3:66863307-66863326 Msa1118280:CDS 15.0%
!!! TAATTTGTGGTTTAAATTTT+AGG - chr7_3:66863753-66863772 Msa1118280:intron 15.0%
!!! CTGTTTTTATGTTTTTTTGA+AGG - chr7_3:66862597-66862616 Msa1118280:CDS 20.0%
!! TATAGTTATATATGTACCAT+GGG + chr7_3:66862749-66862768 None:intergenic 20.0%
!! TTATAGTTATATATGTACCA+TGG + chr7_3:66862750-66862769 None:intergenic 20.0%
!!! ATTTTGTTTGTTTTCTTATG+GGG - chr7_3:66862886-66862905 Msa1118280:CDS 20.0%
!!! TCTTTATGTTTTAATTGTGA+TGG - chr7_3:66863231-66863250 Msa1118280:CDS 20.0%
!!! TTTTTTATGATGATTTCTCT+TGG - chr7_3:66863408-66863427 Msa1118280:CDS 20.0%
!!! CTGTTTTTATGTTTTTTTGA+AGG - chr7_3:66862597-66862616 Msa1118280:CDS 20.0%
!! TATAGTTATATATGTACCAT+GGG + chr7_3:66862749-66862768 None:intergenic 20.0%
!! TTATAGTTATATATGTACCA+TGG + chr7_3:66862750-66862769 None:intergenic 20.0%
!!! ATTTTGTTTGTTTTCTTATG+GGG - chr7_3:66862886-66862905 Msa1118280:CDS 20.0%
!!! TCTTTATGTTTTAATTGTGA+TGG - chr7_3:66863231-66863250 Msa1118280:CDS 20.0%
!!! TTTTTTATGATGATTTCTCT+TGG - chr7_3:66863408-66863427 Msa1118280:CDS 20.0%
! AAACATAAAAACAGAAACAG+AGG + chr7_3:66862591-66862610 None:intergenic 25.0%
! TTGTATGTTGCATATGAAAA+TGG - chr7_3:66862839-66862858 Msa1118280:CDS 25.0%
! TGTATGTTGCATATGAAAAT+GGG - chr7_3:66862840-66862859 Msa1118280:CDS 25.0%
! ATTCATCAATCATCAATCAT+TGG + chr7_3:66863181-66863200 None:intergenic 25.0%
! CATTTGTACACTTAATTTCT+AGG - chr7_3:66863381-66863400 Msa1118280:CDS 25.0%
! CTTAGTTTATCACTAATTTG+TGG - chr7_3:66863740-66863759 Msa1118280:intron 25.0%
! GTTGTTGAAATAACAAAACT+TGG + chr7_3:66864016-66864035 None:intergenic 25.0%
!!! AGTTGTAAAGGTATATTTTG+TGG + chr7_3:66864600-66864619 None:intergenic 25.0%
! AAACATAAAAACAGAAACAG+AGG + chr7_3:66862591-66862610 None:intergenic 25.0%
! TTGTATGTTGCATATGAAAA+TGG - chr7_3:66862839-66862858 Msa1118280:CDS 25.0%
! TGTATGTTGCATATGAAAAT+GGG - chr7_3:66862840-66862859 Msa1118280:CDS 25.0%
! ATTCATCAATCATCAATCAT+TGG + chr7_3:66863181-66863200 None:intergenic 25.0%
! CATTTGTACACTTAATTTCT+AGG - chr7_3:66863381-66863400 Msa1118280:CDS 25.0%
! CTTAGTTTATCACTAATTTG+TGG - chr7_3:66863740-66863759 Msa1118280:intron 25.0%
! GTTGTTGAAATAACAAAACT+TGG + chr7_3:66864016-66864035 None:intergenic 25.0%
!!! AGTTGTAAAGGTATATTTTG+TGG + chr7_3:66864600-66864619 None:intergenic 25.0%
GATCATGGTATTATGCTATT+TGG - chr7_3:66862677-66862696 Msa1118280:CDS 30.0%
! ATGGTATTATGCTATTTGGT+TGG - chr7_3:66862681-66862700 Msa1118280:CDS 30.0%
!! CAAAATCTTCTGAAGTTTGA+AGG - chr7_3:66862952-66862971 Msa1118280:CDS 30.0%
!! GATTCATTTTAATGAGCTTG+AGG - chr7_3:66862994-66863013 Msa1118280:CDS 30.0%
!! ATTTTAATGAGCTTGAGGTA+AGG - chr7_3:66862999-66863018 Msa1118280:CDS 30.0%
GACTAAAGATTGTTATAGTC+CGG + chr7_3:66863056-66863075 None:intergenic 30.0%
GACCAATATGATGTAAACAA+AGG - chr7_3:66863130-66863149 Msa1118280:CDS 30.0%
CAATATGATGTAAACAAAGG+CGG - chr7_3:66863133-66863152 Msa1118280:CDS 30.0%
!!! GTTTTAATTGTGATGGAAGA+TGG - chr7_3:66863238-66863257 Msa1118280:CDS 30.0%
! ATGACTCTAAGAAAATGAAG+AGG + chr7_3:66863364-66863383 None:intergenic 30.0%
TCCAATAGAAGTAAAAGATC+AGG - chr7_3:66863552-66863571 Msa1118280:CDS 30.0%
! TCCTGATCTTTTACTTCTAT+TGG + chr7_3:66863556-66863575 None:intergenic 30.0%
TATTATGCTTGCAAAATTCG+AGG - chr7_3:66863593-66863612 Msa1118280:CDS 30.0%
! AGGACACAAGTATAACTTTT+TGG + chr7_3:66863621-66863640 None:intergenic 30.0%
ACAACAAATTCTCACATAAC+AGG + chr7_3:66863641-66863660 None:intergenic 30.0%
TAGACAGAGAAATGAAATCA+AGG + chr7_3:66863689-66863708 None:intergenic 30.0%
TCATTTCTCTGTCTATTCTT+AGG - chr7_3:66863694-66863713 Msa1118280:CDS 30.0%
AGACAATTCTTCTGATTCAA+TGG - chr7_3:66863840-66863859 Msa1118280:intron 30.0%
TTTATCTTGATCCGTATTAC+CGG + chr7_3:66863938-66863957 None:intergenic 30.0%
CAAATTATAGTAACCACGAA+TGG - chr7_3:66864165-66864184 Msa1118280:intron 30.0%
AACGAGACTGTATTGAAATT+TGG - chr7_3:66864249-66864268 Msa1118280:intron 30.0%
!! ATTCCATTGATTCGTAAAGA+GGG + chr7_3:66864284-66864303 None:intergenic 30.0%
! TTGGAATAATGTTGCTTCAA+TGG - chr7_3:66864503-66864522 Msa1118280:intron 30.0%
!! GTTCTAATTGTTTTTCGAAC+CGG + chr7_3:66864777-66864796 None:intergenic 30.0%
GATCATGGTATTATGCTATT+TGG - chr7_3:66862677-66862696 Msa1118280:CDS 30.0%
! ATGGTATTATGCTATTTGGT+TGG - chr7_3:66862681-66862700 Msa1118280:CDS 30.0%
!! CAAAATCTTCTGAAGTTTGA+AGG - chr7_3:66862952-66862971 Msa1118280:CDS 30.0%
!! GATTCATTTTAATGAGCTTG+AGG - chr7_3:66862994-66863013 Msa1118280:CDS 30.0%
!! ATTTTAATGAGCTTGAGGTA+AGG - chr7_3:66862999-66863018 Msa1118280:CDS 30.0%
GACTAAAGATTGTTATAGTC+CGG + chr7_3:66863056-66863075 None:intergenic 30.0%
GACCAATATGATGTAAACAA+AGG - chr7_3:66863130-66863149 Msa1118280:CDS 30.0%
CAATATGATGTAAACAAAGG+CGG - chr7_3:66863133-66863152 Msa1118280:CDS 30.0%
!!! GTTTTAATTGTGATGGAAGA+TGG - chr7_3:66863238-66863257 Msa1118280:CDS 30.0%
! ATGACTCTAAGAAAATGAAG+AGG + chr7_3:66863364-66863383 None:intergenic 30.0%
TCCAATAGAAGTAAAAGATC+AGG - chr7_3:66863552-66863571 Msa1118280:CDS 30.0%
! TCCTGATCTTTTACTTCTAT+TGG + chr7_3:66863556-66863575 None:intergenic 30.0%
TATTATGCTTGCAAAATTCG+AGG - chr7_3:66863593-66863612 Msa1118280:CDS 30.0%
! AGGACACAAGTATAACTTTT+TGG + chr7_3:66863621-66863640 None:intergenic 30.0%
ACAACAAATTCTCACATAAC+AGG + chr7_3:66863641-66863660 None:intergenic 30.0%
TAGACAGAGAAATGAAATCA+AGG + chr7_3:66863689-66863708 None:intergenic 30.0%
TCATTTCTCTGTCTATTCTT+AGG - chr7_3:66863694-66863713 Msa1118280:CDS 30.0%
AGACAATTCTTCTGATTCAA+TGG - chr7_3:66863840-66863859 Msa1118280:intron 30.0%
TTTATCTTGATCCGTATTAC+CGG + chr7_3:66863938-66863957 None:intergenic 30.0%
CAAATTATAGTAACCACGAA+TGG - chr7_3:66864165-66864184 Msa1118280:intron 30.0%
AACGAGACTGTATTGAAATT+TGG - chr7_3:66864249-66864268 Msa1118280:intron 30.0%
!! ATTCCATTGATTCGTAAAGA+GGG + chr7_3:66864284-66864303 None:intergenic 30.0%
! TTGGAATAATGTTGCTTCAA+TGG - chr7_3:66864503-66864522 Msa1118280:intron 30.0%
!! GTTCTAATTGTTTTTCGAAC+CGG + chr7_3:66864777-66864796 None:intergenic 30.0%
GAAGAAAGACATAAGCTGAA+AGG + chr7_3:66862796-66862815 None:intergenic 35.0%
TGTTGCATATGAAAATGGGT+TGG - chr7_3:66862844-66862863 Msa1118280:CDS 35.0%
!!! AATGGGTTGGACGTAAATTT+TGG - chr7_3:66862857-66862876 Msa1118280:CDS 35.0%
! TATGGGGTTGTTGAGATTTT+TGG - chr7_3:66862902-66862921 Msa1118280:CDS 35.0%
TAGTAATCCAGAGTTTAGCT+GGG + chr7_3:66863094-66863113 None:intergenic 35.0%
! CGCCTTTGTTTACATCATAT+TGG + chr7_3:66863135-66863154 None:intergenic 35.0%
TGTAAACAAAGGCGGTATTT+AGG - chr7_3:66863141-66863160 Msa1118280:CDS 35.0%
TTGATGTGAACCAAAGGATT+TGG - chr7_3:66863331-66863350 Msa1118280:CDS 35.0%
! AAGATCAGGACTAGTGAAAT+AGG - chr7_3:66863566-66863585 Msa1118280:CDS 35.0%
! AGAAGAATTGTCTTGTTGCT+CGG + chr7_3:66863833-66863852 None:intergenic 35.0%
ACAAGAGTCTATACCAGAAA+AGG - chr7_3:66863870-66863889 Msa1118280:intron 35.0%
!!! TTTACTATTGGCTCCTTTTC+TGG + chr7_3:66863886-66863905 None:intergenic 35.0%
! TATAATTTGCCGGTATTGAG+AGG + chr7_3:66864154-66864173 None:intergenic 35.0%
! TCGTGGTTACTATAATTTGC+CGG + chr7_3:66864164-66864183 None:intergenic 35.0%
!! TTCCATTGATTCGTAAAGAG+GGG + chr7_3:66864283-66864302 None:intergenic 35.0%
!! GATTCCATTGATTCGTAAAG+AGG + chr7_3:66864285-66864304 None:intergenic 35.0%
TACTTCATTTCCTTGATTGC+CGG + chr7_3:66864412-66864431 None:intergenic 35.0%
TTATTCCAACCTGGATTCAT+TGG + chr7_3:66864492-66864511 None:intergenic 35.0%
! ATATTTTGTGGCTGAATTCC+TGG + chr7_3:66864588-66864607 None:intergenic 35.0%
ATCTCTATTGTGCTTTCCTA+GGG + chr7_3:66864715-66864734 None:intergenic 35.0%
TATCTCTATTGTGCTTTCCT+AGG + chr7_3:66864716-66864735 None:intergenic 35.0%
TAAAACAGACAAGTGTGTTC+CGG - chr7_3:66864755-66864774 Msa1118280:CDS 35.0%
CCTAATGAAGAAGGAAAAGA+CGG - chr7_3:66864855-66864874 Msa1118280:five_prime_UTR 35.0%
GAAGAAAGACATAAGCTGAA+AGG + chr7_3:66862796-66862815 None:intergenic 35.0%
TGTTGCATATGAAAATGGGT+TGG - chr7_3:66862844-66862863 Msa1118280:CDS 35.0%
!!! AATGGGTTGGACGTAAATTT+TGG - chr7_3:66862857-66862876 Msa1118280:CDS 35.0%
! TATGGGGTTGTTGAGATTTT+TGG - chr7_3:66862902-66862921 Msa1118280:CDS 35.0%
TAGTAATCCAGAGTTTAGCT+GGG + chr7_3:66863094-66863113 None:intergenic 35.0%
! CGCCTTTGTTTACATCATAT+TGG + chr7_3:66863135-66863154 None:intergenic 35.0%
TGTAAACAAAGGCGGTATTT+AGG - chr7_3:66863141-66863160 Msa1118280:CDS 35.0%
TTGATGTGAACCAAAGGATT+TGG - chr7_3:66863331-66863350 Msa1118280:CDS 35.0%
! AAGATCAGGACTAGTGAAAT+AGG - chr7_3:66863566-66863585 Msa1118280:CDS 35.0%
! AGAAGAATTGTCTTGTTGCT+CGG + chr7_3:66863833-66863852 None:intergenic 35.0%
ACAAGAGTCTATACCAGAAA+AGG - chr7_3:66863870-66863889 Msa1118280:intron 35.0%
!!! TTTACTATTGGCTCCTTTTC+TGG + chr7_3:66863886-66863905 None:intergenic 35.0%
! TATAATTTGCCGGTATTGAG+AGG + chr7_3:66864154-66864173 None:intergenic 35.0%
! TCGTGGTTACTATAATTTGC+CGG + chr7_3:66864164-66864183 None:intergenic 35.0%
!! TTCCATTGATTCGTAAAGAG+GGG + chr7_3:66864283-66864302 None:intergenic 35.0%
!! GATTCCATTGATTCGTAAAG+AGG + chr7_3:66864285-66864304 None:intergenic 35.0%
TACTTCATTTCCTTGATTGC+CGG + chr7_3:66864412-66864431 None:intergenic 35.0%
TTATTCCAACCTGGATTCAT+TGG + chr7_3:66864492-66864511 None:intergenic 35.0%
! ATATTTTGTGGCTGAATTCC+TGG + chr7_3:66864588-66864607 None:intergenic 35.0%
ATCTCTATTGTGCTTTCCTA+GGG + chr7_3:66864715-66864734 None:intergenic 35.0%
TATCTCTATTGTGCTTTCCT+AGG + chr7_3:66864716-66864735 None:intergenic 35.0%
TAAAACAGACAAGTGTGTTC+CGG - chr7_3:66864755-66864774 Msa1118280:CDS 35.0%
CCTAATGAAGAAGGAAAAGA+CGG - chr7_3:66864855-66864874 Msa1118280:five_prime_UTR 35.0%
GCTATTTGGTTGGAAGATTC+CGG - chr7_3:66862691-66862710 Msa1118280:CDS 40.0%
!!! GGGTTGTTGAGATTTTTGGT+TGG - chr7_3:66862906-66862925 Msa1118280:CDS 40.0%
ACAAATTGTTCCGTAGAACC+CGG - chr7_3:66863022-66863041 Msa1118280:CDS 40.0%
TTATAGTCCGGATTCAAACC+CGG + chr7_3:66863044-66863063 None:intergenic 40.0%
CTAGTAATCCAGAGTTTAGC+TGG + chr7_3:66863095-66863114 None:intergenic 40.0%
TCTGGATTACTAGAGAGTAG+AGG - chr7_3:66863102-66863121 Msa1118280:CDS 40.0%
CTGGATTACTAGAGAGTAGA+GGG - chr7_3:66863103-66863122 Msa1118280:CDS 40.0%
CTTGGATTGATGTGAACCAA+AGG - chr7_3:66863325-66863344 Msa1118280:CDS 40.0%
AGGATCAAGACCAAATCCTT+TGG + chr7_3:66863344-66863363 None:intergenic 40.0%
! TCTGAGATAAGCAGAAGTTG+AGG - chr7_3:66863517-66863536 Msa1118280:CDS 40.0%
CAGTACAAGGAAAACAGAAG+TGG - chr7_3:66863786-66863805 Msa1118280:intron 40.0%
GTGGGCTTGGAATTTACTAT+TGG + chr7_3:66863898-66863917 None:intergenic 40.0%
ATTTCTGCAAGAACTGCCAA+AGG - chr7_3:66864058-66864077 Msa1118280:intron 40.0%
ACGATGAGAAATGTTCCGAT+AGG - chr7_3:66864099-66864118 Msa1118280:intron 40.0%
CAATACAGTCTCGTTATCCA+TGG + chr7_3:66864244-66864263 None:intergenic 40.0%
TACCCCTCTTTACGAATCAA+TGG - chr7_3:66864278-66864297 Msa1118280:intron 40.0%
! TTGCATCAGCACTTCTTTTC+TGG + chr7_3:66864326-66864345 None:intergenic 40.0%
TGTTACAGAAGATCCACACA+AGG + chr7_3:66864385-66864404 None:intergenic 40.0%
GGATCTTCTGTAACAAACAC+CGG - chr7_3:66864390-66864409 Msa1118280:intron 40.0%
CAGAACGCAATGCATCAAAT+TGG - chr7_3:66864433-66864452 Msa1118280:intron 40.0%
! AGTGTTATCCTGTTTCTCCA+TGG - chr7_3:66864460-66864479 Msa1118280:intron 40.0%
! GTGTTATCCTGTTTCTCCAT+GGG - chr7_3:66864461-66864480 Msa1118280:intron 40.0%
TACTACCAATGAATCCAGGT+TGG - chr7_3:66864484-66864503 Msa1118280:intron 40.0%
GAAGCAACATTATTCCAACC+TGG + chr7_3:66864501-66864520 None:intergenic 40.0%
ATTCCTGGAATTGCCAACAT+AGG + chr7_3:66864573-66864592 None:intergenic 40.0%
GATGCTGCTACAAGTTGTAA+AGG + chr7_3:66864612-66864631 None:intergenic 40.0%
AACTTGTAGCAGCATCACAT+TGG - chr7_3:66864616-66864635 Msa1118280:intron 40.0%
! CAACTGTTACTTGTAGAGGA+AGG + chr7_3:66864669-66864688 None:intergenic 40.0%
ACCAAGAAGCCTAATGAAGA+AGG - chr7_3:66864846-66864865 Msa1118280:five_prime_UTR 40.0%
TCCTTCTTCATTAGGCTTCT+TGG + chr7_3:66864850-66864869 None:intergenic 40.0%
! CCGTCTTTTCCTTCTTCATT+AGG + chr7_3:66864858-66864877 None:intergenic 40.0%
! AGAAGGAAAAGACGGTGTTT+TGG - chr7_3:66864863-66864882 Msa1118280:five_prime_UTR 40.0%
! GAAGGAAAAGACGGTGTTTT+GGG - chr7_3:66864864-66864883 Msa1118280:five_prime_UTR 40.0%
TTCTCATGCTCATACAATCC+AGG - chr7_3:66864923-66864942 Msa1118280:five_prime_UTR 40.0%
GCTATTTGGTTGGAAGATTC+CGG - chr7_3:66862691-66862710 Msa1118280:CDS 40.0%
!!! GGGTTGTTGAGATTTTTGGT+TGG - chr7_3:66862906-66862925 Msa1118280:CDS 40.0%
ACAAATTGTTCCGTAGAACC+CGG - chr7_3:66863022-66863041 Msa1118280:CDS 40.0%
TTATAGTCCGGATTCAAACC+CGG + chr7_3:66863044-66863063 None:intergenic 40.0%
CTAGTAATCCAGAGTTTAGC+TGG + chr7_3:66863095-66863114 None:intergenic 40.0%
TCTGGATTACTAGAGAGTAG+AGG - chr7_3:66863102-66863121 Msa1118280:CDS 40.0%
CTGGATTACTAGAGAGTAGA+GGG - chr7_3:66863103-66863122 Msa1118280:CDS 40.0%
CTTGGATTGATGTGAACCAA+AGG - chr7_3:66863325-66863344 Msa1118280:CDS 40.0%
AGGATCAAGACCAAATCCTT+TGG + chr7_3:66863344-66863363 None:intergenic 40.0%
! TCTGAGATAAGCAGAAGTTG+AGG - chr7_3:66863517-66863536 Msa1118280:CDS 40.0%
CAGTACAAGGAAAACAGAAG+TGG - chr7_3:66863786-66863805 Msa1118280:intron 40.0%
GTGGGCTTGGAATTTACTAT+TGG + chr7_3:66863898-66863917 None:intergenic 40.0%
ATTTCTGCAAGAACTGCCAA+AGG - chr7_3:66864058-66864077 Msa1118280:intron 40.0%
ACGATGAGAAATGTTCCGAT+AGG - chr7_3:66864099-66864118 Msa1118280:intron 40.0%
CAATACAGTCTCGTTATCCA+TGG + chr7_3:66864244-66864263 None:intergenic 40.0%
TACCCCTCTTTACGAATCAA+TGG - chr7_3:66864278-66864297 Msa1118280:intron 40.0%
! TTGCATCAGCACTTCTTTTC+TGG + chr7_3:66864326-66864345 None:intergenic 40.0%
TGTTACAGAAGATCCACACA+AGG + chr7_3:66864385-66864404 None:intergenic 40.0%
GGATCTTCTGTAACAAACAC+CGG - chr7_3:66864390-66864409 Msa1118280:intron 40.0%
CAGAACGCAATGCATCAAAT+TGG - chr7_3:66864433-66864452 Msa1118280:intron 40.0%
! AGTGTTATCCTGTTTCTCCA+TGG - chr7_3:66864460-66864479 Msa1118280:intron 40.0%
! GTGTTATCCTGTTTCTCCAT+GGG - chr7_3:66864461-66864480 Msa1118280:intron 40.0%
TACTACCAATGAATCCAGGT+TGG - chr7_3:66864484-66864503 Msa1118280:intron 40.0%
GAAGCAACATTATTCCAACC+TGG + chr7_3:66864501-66864520 None:intergenic 40.0%
ATTCCTGGAATTGCCAACAT+AGG + chr7_3:66864573-66864592 None:intergenic 40.0%
GATGCTGCTACAAGTTGTAA+AGG + chr7_3:66864612-66864631 None:intergenic 40.0%
AACTTGTAGCAGCATCACAT+TGG - chr7_3:66864616-66864635 Msa1118280:intron 40.0%
! CAACTGTTACTTGTAGAGGA+AGG + chr7_3:66864669-66864688 None:intergenic 40.0%
ACCAAGAAGCCTAATGAAGA+AGG - chr7_3:66864846-66864865 Msa1118280:five_prime_UTR 40.0%
TCCTTCTTCATTAGGCTTCT+TGG + chr7_3:66864850-66864869 None:intergenic 40.0%
! CCGTCTTTTCCTTCTTCATT+AGG + chr7_3:66864858-66864877 None:intergenic 40.0%
! AGAAGGAAAAGACGGTGTTT+TGG - chr7_3:66864863-66864882 Msa1118280:five_prime_UTR 40.0%
! GAAGGAAAAGACGGTGTTTT+GGG - chr7_3:66864864-66864883 Msa1118280:five_prime_UTR 40.0%
TTCTCATGCTCATACAATCC+AGG - chr7_3:66864923-66864942 Msa1118280:five_prime_UTR 40.0%
GAACATGTCTCAGACTGAGA+AGG - chr7_3:66862655-66862674 Msa1118280:CDS 45.0%
TCTCAGACTGAGAAGGATCA+TGG - chr7_3:66862662-66862681 Msa1118280:CDS 45.0%
ATGTACCATGGGTCCAGAAT+TGG + chr7_3:66862738-66862757 None:intergenic 45.0%
CAAATTGTTCCGTAGAACCC+GGG - chr7_3:66863023-66863042 Msa1118280:CDS 45.0%
TATAGTCCGGATTCAAACCC+GGG + chr7_3:66863043-66863062 None:intergenic 45.0%
CTTACTTCCCAGCTAAACTC+TGG - chr7_3:66863084-66863103 Msa1118280:CDS 45.0%
AGGATACTTGCAGCAGTACA+AGG - chr7_3:66863773-66863792 Msa1118280:intron 45.0%
!!! TGCTCGGTTTTTTCTGCACA+AGG + chr7_3:66863817-66863836 None:intergenic 45.0%
TAACACGGAGACCGGTAATA+CGG - chr7_3:66863924-66863943 Msa1118280:intron 45.0%
GGACACTGAACAATCTTGTC+TGG + chr7_3:66863973-66863992 None:intergenic 45.0%
CAGTTCTTGCAGAAATGTCG+AGG + chr7_3:66864054-66864073 None:intergenic 45.0%
! GCAAGAACTGCCAAAGGTAT+TGG - chr7_3:66864064-66864083 Msa1118280:intron 45.0%
AGAAATGTTCCGATAGGTGC+TGG - chr7_3:66864105-66864124 Msa1118280:intron 45.0%
GAAATGTTCCGATAGGTGCT+GGG - chr7_3:66864106-66864125 Msa1118280:intron 45.0%
!! GTTTGTAGTTTCTAGCCTCG+TGG + chr7_3:66864199-66864218 None:intergenic 45.0%
TCTCGTTATCCATGGATGTG+TGG + chr7_3:66864236-66864255 None:intergenic 45.0%
!! GATTCGTAAAGAGGGGTATC+AGG + chr7_3:66864276-66864295 None:intergenic 45.0%
CAGTTCTGTGCAACATAGAG+AGG - chr7_3:66864353-66864372 Msa1118280:intron 45.0%
ACAGAAGATCCACACAAGGA+CGG + chr7_3:66864381-66864400 None:intergenic 45.0%
GTAACAAACACCGGCAATCA+AGG - chr7_3:66864399-66864418 Msa1118280:intron 45.0%
! GGATTCATTGGTAGTACCCA+TGG + chr7_3:66864480-66864499 None:intergenic 45.0%
TGGGTACTACCAATGAATCC+AGG - chr7_3:66864480-66864499 Msa1118280:intron 45.0%
ATGGTGTCCAACACCTATGT+TGG - chr7_3:66864557-66864576 Msa1118280:intron 45.0%
GGAATTGCCAACATAGGTGT+TGG + chr7_3:66864567-66864586 None:intergenic 45.0%
ACACCTATGTTGGCAATTCC+AGG - chr7_3:66864567-66864586 Msa1118280:intron 45.0%
! CTGTTACTTGTAGAGGAAGG+CGG + chr7_3:66864666-66864685 None:intergenic 45.0%
! GCAGCAACTGTTACTTGTAG+AGG + chr7_3:66864673-66864692 None:intergenic 45.0%
ACAAGTAACAGTTGCTGCTC+AGG - chr7_3:66864675-66864694 Msa1118280:intron 45.0%
AACAGTTGCTGCTCAGGAAA+TGG - chr7_3:66864681-66864700 Msa1118280:intron 45.0%
CTATTGTGCTTTCCTAGGGT+TGG + chr7_3:66864711-66864730 None:intergenic 45.0%
CAGTCTCGAAAAGTCCTATC+CGG - chr7_3:66864811-66864830 Msa1118280:CDS 45.0%
AGTCTCGAAAAGTCCTATCC+GGG - chr7_3:66864812-66864831 Msa1118280:CDS 45.0%
! TCTTGGTAGCTAATGTAGCC+CGG + chr7_3:66864833-66864852 None:intergenic 45.0%
! TTTGGGTGGCTCTCAGATTT+TGG - chr7_3:66864881-66864900 Msa1118280:five_prime_UTR 45.0%
ATGAGAAATAGCTCCTGAGC+TGG + chr7_3:66864910-66864929 None:intergenic 45.0%
GAACATGTCTCAGACTGAGA+AGG - chr7_3:66862655-66862674 Msa1118280:CDS 45.0%
TCTCAGACTGAGAAGGATCA+TGG - chr7_3:66862662-66862681 Msa1118280:CDS 45.0%
ATGTACCATGGGTCCAGAAT+TGG + chr7_3:66862738-66862757 None:intergenic 45.0%
CAAATTGTTCCGTAGAACCC+GGG - chr7_3:66863023-66863042 Msa1118280:CDS 45.0%
TATAGTCCGGATTCAAACCC+GGG + chr7_3:66863043-66863062 None:intergenic 45.0%
CTTACTTCCCAGCTAAACTC+TGG - chr7_3:66863084-66863103 Msa1118280:CDS 45.0%
AGGATACTTGCAGCAGTACA+AGG - chr7_3:66863773-66863792 Msa1118280:intron 45.0%
!!! TGCTCGGTTTTTTCTGCACA+AGG + chr7_3:66863817-66863836 None:intergenic 45.0%
TAACACGGAGACCGGTAATA+CGG - chr7_3:66863924-66863943 Msa1118280:intron 45.0%
GGACACTGAACAATCTTGTC+TGG + chr7_3:66863973-66863992 None:intergenic 45.0%
CAGTTCTTGCAGAAATGTCG+AGG + chr7_3:66864054-66864073 None:intergenic 45.0%
! GCAAGAACTGCCAAAGGTAT+TGG - chr7_3:66864064-66864083 Msa1118280:intron 45.0%
AGAAATGTTCCGATAGGTGC+TGG - chr7_3:66864105-66864124 Msa1118280:intron 45.0%
GAAATGTTCCGATAGGTGCT+GGG - chr7_3:66864106-66864125 Msa1118280:intron 45.0%
!! GTTTGTAGTTTCTAGCCTCG+TGG + chr7_3:66864199-66864218 None:intergenic 45.0%
TCTCGTTATCCATGGATGTG+TGG + chr7_3:66864236-66864255 None:intergenic 45.0%
!! GATTCGTAAAGAGGGGTATC+AGG + chr7_3:66864276-66864295 None:intergenic 45.0%
CAGTTCTGTGCAACATAGAG+AGG - chr7_3:66864353-66864372 Msa1118280:intron 45.0%
ACAGAAGATCCACACAAGGA+CGG + chr7_3:66864381-66864400 None:intergenic 45.0%
GTAACAAACACCGGCAATCA+AGG - chr7_3:66864399-66864418 Msa1118280:intron 45.0%
! GGATTCATTGGTAGTACCCA+TGG + chr7_3:66864480-66864499 None:intergenic 45.0%
TGGGTACTACCAATGAATCC+AGG - chr7_3:66864480-66864499 Msa1118280:intron 45.0%
ATGGTGTCCAACACCTATGT+TGG - chr7_3:66864557-66864576 Msa1118280:intron 45.0%
GGAATTGCCAACATAGGTGT+TGG + chr7_3:66864567-66864586 None:intergenic 45.0%
ACACCTATGTTGGCAATTCC+AGG - chr7_3:66864567-66864586 Msa1118280:intron 45.0%
! CTGTTACTTGTAGAGGAAGG+CGG + chr7_3:66864666-66864685 None:intergenic 45.0%
! GCAGCAACTGTTACTTGTAG+AGG + chr7_3:66864673-66864692 None:intergenic 45.0%
ACAAGTAACAGTTGCTGCTC+AGG - chr7_3:66864675-66864694 Msa1118280:intron 45.0%
AACAGTTGCTGCTCAGGAAA+TGG - chr7_3:66864681-66864700 Msa1118280:intron 45.0%
CTATTGTGCTTTCCTAGGGT+TGG + chr7_3:66864711-66864730 None:intergenic 45.0%
CAGTCTCGAAAAGTCCTATC+CGG - chr7_3:66864811-66864830 Msa1118280:CDS 45.0%
AGTCTCGAAAAGTCCTATCC+GGG - chr7_3:66864812-66864831 Msa1118280:CDS 45.0%
! TCTTGGTAGCTAATGTAGCC+CGG + chr7_3:66864833-66864852 None:intergenic 45.0%
! TTTGGGTGGCTCTCAGATTT+TGG - chr7_3:66864881-66864900 Msa1118280:five_prime_UTR 45.0%
ATGAGAAATAGCTCCTGAGC+TGG + chr7_3:66864910-66864929 None:intergenic 45.0%
TTGGCCGGAATTGGACATTC+CGG + chr7_3:66862719-66862738 None:intergenic 50.0%
TGTCCAATTCCGGCCAATTC+TGG - chr7_3:66862722-66862741 Msa1118280:CDS 50.0%
GGATTCAAACCCGGGTTCTA+CGG + chr7_3:66863035-66863054 None:intergenic 50.0%
GTAGAACCCGGGTTTGAATC+CGG - chr7_3:66863034-66863053 Msa1118280:CDS 50.0%
CAAGCCCACCGAAGATAACA+CGG - chr7_3:66863909-66863928 Msa1118280:intron 50.0%
GTCTCCGTGTTATCTTCGGT+GGG + chr7_3:66863916-66863935 None:intergenic 50.0%
ACCGAAGATAACACGGAGAC+CGG - chr7_3:66863916-66863935 Msa1118280:intron 50.0%
ACCGGTCTCCGTGTTATCTT+CGG + chr7_3:66863920-66863939 None:intergenic 50.0%
!! TGCCAAAGGTATTGGACTGC+TGG - chr7_3:66864072-66864091 Msa1118280:intron 50.0%
CACCAGCAGTCCAATACCTT+TGG + chr7_3:66864077-66864096 None:intergenic 50.0%
!! CAAAGGTATTGGACTGCTGG+TGG - chr7_3:66864075-66864094 Msa1118280:intron 50.0%
AGCACCTAGCCTCTCAATAC+CGG - chr7_3:66864142-66864161 Msa1118280:intron 50.0%
! TTTGCCGGTATTGAGAGGCT+AGG + chr7_3:66864149-66864168 None:intergenic 50.0%
!! GTAGTTTCTAGCCTCGTGGT+TGG + chr7_3:66864195-66864214 None:intergenic 50.0%
! CATGGATGTGTGGTGGTGAT+CGG + chr7_3:66864226-66864245 None:intergenic 50.0%
CGTTATCCATGGATGTGTGG+TGG + chr7_3:66864233-66864252 None:intergenic 50.0%
GGTAGTACCCATGGAGAAAC+AGG + chr7_3:66864471-66864490 None:intergenic 50.0%
CATTGCATGGATGCCGAAGT+CGG + chr7_3:66864540-66864559 None:intergenic 50.0%
!! AGGTGTTGGACACCATTGCA+TGG + chr7_3:66864553-66864572 None:intergenic 50.0%
GTAGCAGCATCACATTGGAG+TGG - chr7_3:66864621-66864640 Msa1118280:intron 50.0%
GTAGCTAATGTAGCCCGGAT+AGG + chr7_3:66864828-66864847 None:intergenic 50.0%
!! GGAAAAGACGGTGTTTTGGG+TGG - chr7_3:66864867-66864886 Msa1118280:five_prime_UTR 50.0%
!! CAGATTTTGGAAGCCAGCTC+AGG - chr7_3:66864894-66864913 Msa1118280:five_prime_UTR 50.0%
TTGGCCGGAATTGGACATTC+CGG + chr7_3:66862719-66862738 None:intergenic 50.0%
TGTCCAATTCCGGCCAATTC+TGG - chr7_3:66862722-66862741 Msa1118280:CDS 50.0%
GGATTCAAACCCGGGTTCTA+CGG + chr7_3:66863035-66863054 None:intergenic 50.0%
GTAGAACCCGGGTTTGAATC+CGG - chr7_3:66863034-66863053 Msa1118280:CDS 50.0%
CAAGCCCACCGAAGATAACA+CGG - chr7_3:66863909-66863928 Msa1118280:intron 50.0%
GTCTCCGTGTTATCTTCGGT+GGG + chr7_3:66863916-66863935 None:intergenic 50.0%
ACCGAAGATAACACGGAGAC+CGG - chr7_3:66863916-66863935 Msa1118280:intron 50.0%
ACCGGTCTCCGTGTTATCTT+CGG + chr7_3:66863920-66863939 None:intergenic 50.0%
!! TGCCAAAGGTATTGGACTGC+TGG - chr7_3:66864072-66864091 Msa1118280:intron 50.0%
CACCAGCAGTCCAATACCTT+TGG + chr7_3:66864077-66864096 None:intergenic 50.0%
!! CAAAGGTATTGGACTGCTGG+TGG - chr7_3:66864075-66864094 Msa1118280:intron 50.0%
AGCACCTAGCCTCTCAATAC+CGG - chr7_3:66864142-66864161 Msa1118280:intron 50.0%
! TTTGCCGGTATTGAGAGGCT+AGG + chr7_3:66864149-66864168 None:intergenic 50.0%
!! GTAGTTTCTAGCCTCGTGGT+TGG + chr7_3:66864195-66864214 None:intergenic 50.0%
! CATGGATGTGTGGTGGTGAT+CGG + chr7_3:66864226-66864245 None:intergenic 50.0%
CGTTATCCATGGATGTGTGG+TGG + chr7_3:66864233-66864252 None:intergenic 50.0%
GGTAGTACCCATGGAGAAAC+AGG + chr7_3:66864471-66864490 None:intergenic 50.0%
CATTGCATGGATGCCGAAGT+CGG + chr7_3:66864540-66864559 None:intergenic 50.0%
!! AGGTGTTGGACACCATTGCA+TGG + chr7_3:66864553-66864572 None:intergenic 50.0%
GTAGCAGCATCACATTGGAG+TGG - chr7_3:66864621-66864640 Msa1118280:intron 50.0%
GTAGCTAATGTAGCCCGGAT+AGG + chr7_3:66864828-66864847 None:intergenic 50.0%
!! GGAAAAGACGGTGTTTTGGG+TGG - chr7_3:66864867-66864886 Msa1118280:five_prime_UTR 50.0%
!! CAGATTTTGGAAGCCAGCTC+AGG - chr7_3:66864894-66864913 Msa1118280:five_prime_UTR 50.0%
TGGTTGGAAGATTCCGGTGC+CGG - chr7_3:66862697-66862716 Msa1118280:CDS 55.0%
GGAATTGGACATTCCGGCAC+CGG + chr7_3:66862713-66862732 None:intergenic 55.0%
! GGTGCCGGAATGTCCAATTC+CGG - chr7_3:66862712-66862731 Msa1118280:CDS 55.0%
GGTCCAGAATTGGCCGGAAT+TGG + chr7_3:66862728-66862747 None:intergenic 55.0%
ACCATGGGTCCAGAATTGGC+CGG + chr7_3:66862734-66862753 None:intergenic 55.0%
! CGTGTTATCTTCGGTGGGCT+TGG + chr7_3:66863911-66863930 None:intergenic 55.0%
GGTCTCCGTGTTATCTTCGG+TGG + chr7_3:66863917-66863936 None:intergenic 55.0%
AGTGTCCGCGATGCAACAGT+TGG - chr7_3:66863986-66864005 Msa1118280:intron 55.0%
GTGTCCGCGATGCAACAGTT+GGG - chr7_3:66863987-66864006 Msa1118280:intron 55.0%
GTGTCCCAACTGTTGCATCG+CGG + chr7_3:66863994-66864013 None:intergenic 55.0%
!! ATGTTCCGATAGGTGCTGGG+AGG - chr7_3:66864109-66864128 Msa1118280:intron 55.0%
CGTGGTTGGAACTCCATTCG+TGG + chr7_3:66864181-66864200 None:intergenic 55.0%
CGAATGGAGTTCCAACCACG+AGG - chr7_3:66864181-66864200 Msa1118280:intron 55.0%
CGATCACCACCACACATCCA+TGG - chr7_3:66864224-66864243 Msa1118280:intron 55.0%
AGAGAGGAACCGTCCTTGTG+TGG - chr7_3:66864369-66864388 Msa1118280:intron 55.0%
GGCAGCAGTTCATCCGACTT+CGG - chr7_3:66864524-66864543 Msa1118280:intron 55.0%
CGACTTCGGCATCCATGCAA+TGG - chr7_3:66864538-66864557 Msa1118280:intron 55.0%
GGAAATGGCTCACCAACCCT+AGG - chr7_3:66864696-66864715 Msa1118280:intron 55.0%
TGGTTGGAAGATTCCGGTGC+CGG - chr7_3:66862697-66862716 Msa1118280:CDS 55.0%
GGAATTGGACATTCCGGCAC+CGG + chr7_3:66862713-66862732 None:intergenic 55.0%
! GGTGCCGGAATGTCCAATTC+CGG - chr7_3:66862712-66862731 Msa1118280:CDS 55.0%
GGTCCAGAATTGGCCGGAAT+TGG + chr7_3:66862728-66862747 None:intergenic 55.0%
ACCATGGGTCCAGAATTGGC+CGG + chr7_3:66862734-66862753 None:intergenic 55.0%
! CGTGTTATCTTCGGTGGGCT+TGG + chr7_3:66863911-66863930 None:intergenic 55.0%
GGTCTCCGTGTTATCTTCGG+TGG + chr7_3:66863917-66863936 None:intergenic 55.0%
AGTGTCCGCGATGCAACAGT+TGG - chr7_3:66863986-66864005 Msa1118280:intron 55.0%
GTGTCCGCGATGCAACAGTT+GGG - chr7_3:66863987-66864006 Msa1118280:intron 55.0%
GTGTCCCAACTGTTGCATCG+CGG + chr7_3:66863994-66864013 None:intergenic 55.0%
!! ATGTTCCGATAGGTGCTGGG+AGG - chr7_3:66864109-66864128 Msa1118280:intron 55.0%
CGTGGTTGGAACTCCATTCG+TGG + chr7_3:66864181-66864200 None:intergenic 55.0%
CGAATGGAGTTCCAACCACG+AGG - chr7_3:66864181-66864200 Msa1118280:intron 55.0%
CGATCACCACCACACATCCA+TGG - chr7_3:66864224-66864243 Msa1118280:intron 55.0%
AGAGAGGAACCGTCCTTGTG+TGG - chr7_3:66864369-66864388 Msa1118280:intron 55.0%
GGCAGCAGTTCATCCGACTT+CGG - chr7_3:66864524-66864543 Msa1118280:intron 55.0%
CGACTTCGGCATCCATGCAA+TGG - chr7_3:66864538-66864557 Msa1118280:intron 55.0%
GGAAATGGCTCACCAACCCT+AGG - chr7_3:66864696-66864715 Msa1118280:intron 55.0%
TCCGGCCAATTCTGGACCCA+TGG - chr7_3:66862730-66862749 Msa1118280:CDS 60.0%
!! TTCCGATAGGTGCTGGGAGG+CGG - chr7_3:66864112-66864131 Msa1118280:intron 60.0%
TTCCGCCTCCCAGCACCTAT+CGG + chr7_3:66864117-66864136 None:intergenic 60.0%
TTGTAGAGGAAGGCGGCGAG+AGG + chr7_3:66864659-66864678 None:intergenic 60.0%
TCCGGCCAATTCTGGACCCA+TGG - chr7_3:66862730-66862749 Msa1118280:CDS 60.0%
!! TTCCGATAGGTGCTGGGAGG+CGG - chr7_3:66864112-66864131 Msa1118280:intron 60.0%
TTCCGCCTCCCAGCACCTAT+CGG + chr7_3:66864117-66864136 None:intergenic 60.0%
TTGTAGAGGAAGGCGGCGAG+AGG + chr7_3:66864659-66864678 None:intergenic 60.0%
GGCGGCGAGAGGCAAAGTGA+TGG + chr7_3:66864648-66864667 None:intergenic 65.0%
GGCGGCGAGAGGCAAAGTGA+TGG + chr7_3:66864648-66864667 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 66862542 66864956 66862542 ID=Msa1118280;Name=Msa1118280
chr7_3 mRNA 66862542 66864956 66862542 ID=Msa1118280-mRNA-1;Parent=Msa1118280;Name=Msa1118280-mRNA-1;_AED=0.00;_eAED=0.00;_QI=111|1|0.5|1|1|1|2|0|426
chr7_3 exon 66862542 66863723 66862542 ID=Msa1118280-mRNA-1:exon:16290;Parent=Msa1118280-mRNA-1
chr7_3 exon 66864747 66864956 66864747 ID=Msa1118280-mRNA-1:exon:16289;Parent=Msa1118280-mRNA-1
chr7_3 five_prime_UTR 66864846 66864956 66864846 ID=Msa1118280-mRNA-1:five_prime_utr;Parent=Msa1118280-mRNA-1
chr7_3 CDS 66864747 66864845 66864747 ID=Msa1118280-mRNA-1:cds;Parent=Msa1118280-mRNA-1
chr7_3 CDS 66862542 66863723 66862542 ID=Msa1118280-mRNA-1:cds;Parent=Msa1118280-mRNA-1
Gene Sequence

>Msa1118280

ATGAACATGTCTCAGACTGAGAAGGATCATGGTATTATGCTATTTGGTTGGAAGATTCCGGTGCCGGAATGTCCAATTCCGGCCAATTCTGGACCCATGGATACTTGCAGCAGTACAAGGAAAACAGAAGTGGAAATACCTTGTGCAGAAAAAACCGAGCAACAAGACAATTCTTCTGATTCAATGGATAGTAAACAAGAGTCTATACCAGAAAAGGAGCCAATAGTAAATTCCAAGCCCACCGAAGATAACACGGAGACCGGTAATACGGATCAAGATAAACTCTTAAAGAAACCAGACAAGATTGTTCAGTGTCCGCGATGCAACAGTTGGGACACCAAGTTTTGTTATTTCAACAACTATAACGTCAATCAACCTCGACATTTCTGCAAGAACTGCCAAAGGTATTGGACTGCTGGTGGAACGATGAGAAATGTTCCGATAGGTGCTGGGAGGCGGAAGAATAAGCACCTAGCCTCTCAATACCGGCAAATTATAGTAACCACGAATGGAGTTCCAACCACGAGGCTAGAAACTACAAACTCATCCGATCACCACCACACATCCATGGATAACGAGACTGTATTGAAATTTGGTCCTGATACCCCTCTTTACGAATCAATGGAATCGATGCTTCATCTTAGAGACCAGAAAAGAAGTGCTGATGCAAATTCAAACAGTTCTGTGCAACATAGAGAGGAACCGTCCTTGTGTGGATCTTCTGTAACAAACACCGGCAATCAAGGAAATGAAGTATCAGAACGCAATGCATCAAATTGGTTGCAGTGTTATCCTGTTTCTCCATGGGTACTACCAATGAATCCAGGTTGGAATAATGTTGCTTCAATGGCAGCAGTTCATCCGACTTCGGCATCCATGCAATGGTGTCCAACACCTATGTTGGCAATTCCAGGAATTCAGCCACAAAATATACCTTTACAACTTGTAGCAGCATCACATTGGAGTGGACCATCACTTTGCCTCTCGCCGCCTTCCTCTACAAGTAACAGTTGCTGCTCAGGAAATGGCTCACCAACCCTAGGAAAGCACAATAGAGATACAGTTTTCGCAGATGAAGATAAAACAGACAAGTGTGTTCCGGTTCGAAAAACAATTAGAACTGATGTCACAGATGCAGTCTCGAAAAGTCCTATCCGGGCTACATTAGCTACCAAGAAGCCTAATGAAGAAGGAAAAGACGGTGTTTTGGGTGGCTCTCAGATTTTGGAAGCCAGCTCAGGAGCTATTTCTCATGCTCATACAATCCAGGAAAGCATATAA
Protein sequence

>Msa1118280

MNMSQTEKDHGIMLFGWKIPVPECPIPANSGPMDTCSSTRKTEVEIPCAEKTEQQDNSSDSMDSKQESIPEKEPIVNSKPTEDNTETGNTDQDKLLKKPDKIVQCPRCNSWDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPIGAGRRKNKHLASQYRQIIVTTNGVPTTRLETTNSSDHHHTSMDNETVLKFGPDTPLYESMESMLHLRDQKRSADANSNSSVQHREEPSLCGSSVTNTGNQGNEVSERNASNWLQCYPVSPWVLPMNPGWNNVASMAAVHPTSASMQWCPTPMLAIPGIQPQNIPLQLVAASHWSGPSLCLSPPSSTSNSCCSGNGSPTLGKHNRDTVFADEDKTDKCVPVRKTIRTDVTDAVSKSPIRATLATKKPNEEGKDGVLGGSQILEASSGAISHAHTIQESI*